Citrus Sinensis ID: 003615
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SB51 | 1008 | Ubiquitin carboxyl-termin | yes | no | 0.897 | 0.718 | 0.445 | 1e-137 | |
| Q9FKP5 | 731 | Ubiquitin carboxyl-termin | no | no | 0.335 | 0.370 | 0.640 | 1e-95 | |
| Q67XW5 | 631 | Ubiquitin carboxyl-termin | no | no | 0.288 | 0.369 | 0.572 | 3e-78 | |
| Q9SJA1 | 672 | Ubiquitin carboxyl-termin | no | no | 0.288 | 0.346 | 0.576 | 6e-77 | |
| Q9FPS9 | 924 | Ubiquitin carboxyl-termin | no | no | 0.296 | 0.258 | 0.522 | 1e-68 | |
| D3ZU96 | 1325 | Ubiquitin carboxyl-termin | yes | no | 0.273 | 0.166 | 0.395 | 6e-45 | |
| B2RQC2 | 1324 | Ubiquitin carboxyl-termin | yes | no | 0.273 | 0.166 | 0.395 | 9e-45 | |
| Q9H9J4 | 1324 | Ubiquitin carboxyl-termin | yes | no | 0.273 | 0.166 | 0.391 | 2e-44 | |
| E1B9W9 | 1333 | Ubiquitin carboxyl-termin | yes | no | 0.273 | 0.165 | 0.391 | 2e-44 | |
| Q9P275 | 1121 | Ubiquitin carboxyl-termin | no | no | 0.270 | 0.194 | 0.377 | 1e-42 |
| >sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana GN=UBP16 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 369/829 (44%), Positives = 464/829 (55%), Gaps = 105/829 (12%)
Query: 1 MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS 60
M + DLG S LVLVVS V P I L +R KWR A R+EEI+RLLI ASEEAARAE EAS
Sbjct: 1 MLLVLDLGISSLVLVVSLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASEEAARAELEAS 60
Query: 61 YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
+S+ V V C VC+ TTRC+RCKAVRYCSGKCQI+HWRQGHKDEC P SI ++
Sbjct: 61 VEFSS-VAVSNVFHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYD 119
Query: 121 INDVGNFTSQKAAEPDQSEAYGDRFKFESKLPA-KPIQMSSEESESSDRSSSSE-----V 174
D + ++ E G E+ L +P+ + ES S+R+ S E +
Sbjct: 120 SED------ESDSDLRLGEENGQNTPEETLLVGPEPVTIPIGESLLSNRARSPEDGNGDI 173
Query: 175 PQRKDDEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKL 234
KDD + D E A E+S +SFSG +S ++S D++S CES S+ESE+
Sbjct: 174 ADNKDDLI------DKEEAVSVAETSGSSFSG-FSSSPRNDSGDEISRCESFSSSESERS 226
Query: 235 DGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQ 294
+ L A ++++ D + + K LSPKF LV+SVDN L + KP
Sbjct: 227 ESLLDAHVSVEPEDTCFSTIEDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPEDDAGQN 286
Query: 295 CTPANSL-GLGASHMNVNAERSTVSSSFWGRTL---EPKMDSC--SDAALP--------- 339
+ + SL L V+A+ S SS FWG L E DSC S + P
Sbjct: 287 QSQSRSLHSLVTDRHPVSADPSLKSSDFWGTALGSAERVSDSCVKSKSGRPGNSSLHFSF 346
Query: 340 ---DSNGASKSKLSDSRSSLLSSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEG 396
S S +K+S+ RSS+L E+P G ++G
Sbjct: 347 GSGSSRDTSAAKVSEQRSSIL---KEAPR-----------------------GTGYISDG 380
Query: 397 VVLME--STNMDAPEVKNSSSLNCKSSSHAVNGTKSG--SHVVKSGEVKSSVSLSSYGPP 452
V L E + D E+ +L SS+ A++ S SHV +S S P
Sbjct: 381 VNLRERNAKRFDEAEI----ALPISSSTDALSPLDSSNLSHVTLPKSKSASSENGSMLAP 436
Query: 453 LSCVGRDSVCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVP-SVRSERFDNVQR 511
L + S N L M P +S R + Q+
Sbjct: 437 LKVGEVQLLASKASNTKKCADL--------------------MKHSPLGAKSVRVLDHQK 476
Query: 512 SSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYEL 571
+ Q NS +GLK S+ K VDQ+ KS E AGR+ KGLF YE+
Sbjct: 477 QNGAVVQHINSLHG-RSGLKASVLKVVDQWTRPKSEN-------EMAGRHGHKGLFPYEV 528
Query: 572 FVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFT 631
F KLY + K+E QPCGLIN GNSC+ANVV QCL FTPPLT YFLQ HS+ C KK+ CFT
Sbjct: 529 FAKLYTY-KIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFT 587
Query: 632 CELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE-- 689
C E L+++AK+ KSPLSP G+LS+LQ+IG LGNG+EEDAHEFLR+ +DTMQSVCI+
Sbjct: 588 CGFEKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKAS 647
Query: 690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
E + S LED TTLIGLTFGGYLRSKIKC KC KSE +E+MMDLTVEI+GDI L++
Sbjct: 648 EYDMTKSSKLED-TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDD 706
Query: 750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
ALRR+T TEILDGENKY+C CKSYE+AKKKL I E PN+LTIALKRFQ
Sbjct: 707 ALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQ 755
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2 |
| >sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/284 (64%), Positives = 214/284 (75%), Gaps = 13/284 (4%)
Query: 528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCG 587
+GLKTS+ K V FR +SSK+ D+ FSYELFVKLY ++VELQP G
Sbjct: 278 SGLKTSVQKVVQHFRPPQSSKK------SQPSSSIDEMSFSYELFVKLY-CDRVELQPFG 330
Query: 588 LINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSP 647
L+N GNSCYAN VLQCLAFT PL +Y ++GLHSK C KK WCF CE E+LIL+A+ G+SP
Sbjct: 331 LVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGESP 390
Query: 648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIG 707
LSPI ILS+LQ IG LG G+EEDAHEFLR A+DTMQSV ++EA A+GP +ETTL+G
Sbjct: 391 LSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAP--AAGPFAEETTLVG 448
Query: 708 LTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYK 767
LTFGGYL SKIKC C KSER E MMDLTVEI+GDIG+LEEAL ++T E+LDGEN+Y
Sbjct: 449 LTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYF 508
Query: 768 CDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPL--PISF 807
C RCKSY+KAKKKL I+E PNILT+ LKRFQ F L PI F
Sbjct: 509 CGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHF 552
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana GN=UBP18 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 169/234 (72%), Gaps = 1/234 (0%)
Query: 566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
LF YE FV+ +NW+ EL PCGL+NCGNSC+ANV+LQCL++T PL AY L+ H +EC +
Sbjct: 148 LFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMR 207
Query: 626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
DWCF CE + + RA + P SP+ I+SRL +IG LG GR+EDAHEF+RYAID MQS
Sbjct: 208 NDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQS 267
Query: 686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
VC++E G P ETTLI FGG L+S+++CT C+ S++ E MMDL VE+ GD
Sbjct: 268 VCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA 327
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
G+LEE L ++T E L G+N YKCDRC Y KA K+LTI APNILTIALKR+Q
Sbjct: 328 GSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ 381
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana GN=UBP19 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 289 bits (740), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 167/234 (71%), Gaps = 1/234 (0%)
Query: 566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
LF YE FV+ YNW++ + PCGL NCGNSC+ANVVLQCL++T PL AY L+ H +EC +
Sbjct: 154 LFPYESFVRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRR 213
Query: 626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
DWCF CE EN + RA + P SP+ I+SRL +IG LG GR+EDAHE +R+AID MQS
Sbjct: 214 NDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQS 273
Query: 686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
VC++E G P ETTLI FGG L+S+++CT C S++ E MMDLTVEI GD
Sbjct: 274 VCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDA 333
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+LEE L ++T E L G+N YKCDRC Y KA K+L+I APNILTIALKRFQ
Sbjct: 334 VSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ 387
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 164/241 (68%), Gaps = 2/241 (0%)
Query: 560 RYSD-KGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGL 618
RY + K LF YE F+K + +L P GL+NCGNSCYAN VLQ L T PL AY L+
Sbjct: 411 RYKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRS 470
Query: 619 HSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRY 678
HS+ C+ KDWC CELE ++ ++ PLS ILS ++SI Q+G+G +EDAHEFLR
Sbjct: 471 HSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRL 530
Query: 679 AIDTMQSVCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLT 737
+ +MQS+C+E G P ETTL+ FGG LRSK+KC +C +SER E +MDLT
Sbjct: 531 LVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLT 590
Query: 738 VEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
+EI G + +L++AL ++T E LDGEN Y+C RC Y +A+K+L+I EAPNILTI LKRF
Sbjct: 591 LEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRF 650
Query: 798 Q 798
Q
Sbjct: 651 Q 651
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus GN=Usp42 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161
Query: 638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LTI+LKRF F+
Sbjct: 279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323
|
Deubiquitinating enzyme which may play an important role during spermatogenesis. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|B2RQC2|UBP42_MOUSE Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus GN=Usp42 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161
Query: 638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LTI+LKRF F+
Sbjct: 279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323
|
Deubiquitinating enzyme which may play an important role during spermatogenesis. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162
Query: 638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LT++LKRF F+
Sbjct: 280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324
|
Deubiquitinating enzyme which may play an important role during spermatogenesis. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|E1B9W9|UBP42_BOVIN Ubiquitin carboxyl-terminal hydrolase 42 OS=Bos taurus GN=USP42 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162
Query: 638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LT++LKRF F+
Sbjct: 280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324
|
Deubiquitinating enzyme which may play an important role during spermatogenesis. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
| >sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 10/228 (4%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W +V GL N GN+C+ N +QCL +TPPL Y L H++ C + +C C ++N
Sbjct: 114 WERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173
Query: 638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I++A + + + P+ + L+ I G +EDAHEFLRY ID MQ C+ N
Sbjct: 174 IVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACL-----NGC 228
Query: 697 GPLEDE---TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRR 753
L+ + TTL+ FGGYLRS++KC+ C S+ + +D+ +EI N+ AL
Sbjct: 229 AKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALEL 287
Query: 754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
+ ++L GEN Y C +CK A K+ TI N+LT++LKRF FS
Sbjct: 288 FVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFS 335
|
May be required for maintaining multiple types of adult stem cells. May function as a transcriptional repressor by continually deubiquiting histone H2B at the promoters of genes critical for cellular differentiation, thereby preventing histone H3 'Lys-4' trimethylation (H3K4). Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| 147776521 | 1225 | hypothetical protein VITISV_003549 [Viti | 0.970 | 0.639 | 0.511 | 0.0 | |
| 225459111 | 1213 | PREDICTED: ubiquitin carboxyl-terminal h | 0.956 | 0.636 | 0.502 | 0.0 | |
| 356518408 | 1125 | PREDICTED: ubiquitin carboxyl-terminal h | 0.987 | 0.708 | 0.493 | 0.0 | |
| 356510092 | 1063 | PREDICTED: ubiquitin carboxyl-terminal h | 0.990 | 0.751 | 0.491 | 0.0 | |
| 224063313 | 1095 | predicted protein [Populus trichocarpa] | 0.871 | 0.642 | 0.501 | 1e-180 | |
| 357489973 | 1050 | Ubiquitin carboxyl-terminal hydrolase [M | 0.867 | 0.666 | 0.456 | 1e-175 | |
| 357465295 | 1116 | Ubiquitin carboxyl-terminal hydrolase [M | 0.960 | 0.694 | 0.476 | 1e-173 | |
| 449461409 | 1113 | PREDICTED: ubiquitin carboxyl-terminal h | 0.952 | 0.690 | 0.452 | 1e-167 | |
| 449511450 | 1115 | PREDICTED: LOW QUALITY PROTEIN: ubiquiti | 0.947 | 0.686 | 0.450 | 1e-164 | |
| 297799550 | 1007 | ubiquitin-specific protease 16 [Arabidop | 0.893 | 0.715 | 0.434 | 1e-147 |
| >gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/888 (51%), Positives = 549/888 (61%), Gaps = 105/888 (11%)
Query: 1 MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS 60
M V GDLGFS L L+ S FP I L+IR KWR AVARKEEIKRLLILASEEAARAE E
Sbjct: 1 MLVPGDLGFSCLALL-SLFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAARAELE-- 57
Query: 61 YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
+ V V QCAVC+ PTTTRCARCKAVRYCSGKCQI+HWRQGHK+EC PPSI+H+
Sbjct: 58 ---TAAVSVSPQFQCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECNPPSITHQ 114
Query: 121 INDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKDD 180
I D +SQKA + ++ Y +R + E + KPI+ E S + S EV +DD
Sbjct: 115 IIDESISSSQKAVKQEKHAIYDNRLETEGQQCVKPIETFLSEPAFSKPNCSPEVSCEEDD 174
Query: 181 EVEVEFHADGEGASCTY-----------------ESSDASFSGFSASHTSSESSDDVSVC 223
++VEF ADG + T E SD S S TSSE SDDVSV
Sbjct: 175 HIKVEFLADGNVSDSTSKSSSTSFSGFSTSTDRAEPSD----NVSVSTTSSELSDDVSVS 230
Query: 224 ESIISNESEKLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFC 283
ESI S + EK DG S D + +++N + E P SP+F LVDSV++FT ++
Sbjct: 231 ESINSYDPEKSDGHKSDDSAMPETISSINTHQNE---PFSPEFTGLVDSVNSFTGSSKLN 287
Query: 284 ETKPGCSG-DLQCTPANSLGLGAS-HMNVNAERSTVSSSFWGRTLE---PKMDSCSDAAL 338
+ K CS + QC ++S S + A+ ST SS FW TL+ + + D+A
Sbjct: 288 QIKSSCSDVETQCRSSSSGLSIKSCNERSVAQPSTASSGFWEGTLDLNRTRNHAQDDSAQ 347
Query: 339 PDSNGASKSKLSDSRSSLLSSINESPS--PSLPEKSPKANVFSPKIVHPAVL-------- 388
++GA S +SDS S L S N S S P L + ++ HP+ L
Sbjct: 348 SYASGAD-SNISDSESVLRFSFNLSGSTIPPLHAEVSESKSTVLDDAHPSTLGIKKPIEG 406
Query: 389 ----------GNTRDTEGVVLMESTNMDAPEVKNSSSLNCKSSSHAVNGTKSGSHVVKSG 438
G + EGV E + A + +NS SL +SS+ +G + SH +KS
Sbjct: 407 VASSEKISTLGIKKPIEGVASSEKISTKALKFRNSPSLAFESSNLVDSGPSNDSHKLKSR 466
Query: 439 EVKSSVSLSSYGPPLSCVGRDSVCSNG-----------------LNISGGTSLRFEKSNI 481
EVK S S P G DS+ + +N G S + + +
Sbjct: 467 EVKPFSSSVSNAHPSCSTGGDSISIDAPKARSSSSLSSERSNHVVNGKSGASHQLKSREV 526
Query: 482 ------------------------------VTNDIGSSSNFVGMPSVPSVRSERFDNVQR 511
V +D+ SS+ G P VP+V+S + D V
Sbjct: 527 ESLSSGASDPHLSSSTEGHSVASMRSGKSTVDSDLHLSSSTRGHP-VPNVKSGKVDGVHT 585
Query: 512 SSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQC-LSVGCETAGRYSDKGLFSYE 570
+A S+QI N V NGLKTS+ K VDQFR SK SK L VG E AGR SDKGLFSYE
Sbjct: 586 VAASSSQIANHSPIVSNGLKTSVRKVVDQFRPSKLSKSLPLGVGSEIAGRCSDKGLFSYE 645
Query: 571 LFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF 630
+FVKLY WNKVEL+PCGL+NCGNSCYAN VLQCLAFTPPLT+YFLQGLHSK C KK+WCF
Sbjct: 646 VFVKLYIWNKVELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCF 705
Query: 631 TCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE 690
TCE E+LIL+AK+G SPLSP+GILS++++IGS LGNG+EEDAHEFLRYAID MQSVC++E
Sbjct: 706 TCEFESLILKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKE 765
Query: 691 AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEA 750
AGVNASG LE+ET+LIGLTFGGYLRSKIKC KCHGKSER ERMMDLTVEIEGDIG LEEA
Sbjct: 766 AGVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEA 825
Query: 751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L ++T TEILDGENKY+C RCKSYEKAKKKLT+ EAPNILTIALKRFQ
Sbjct: 826 LHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQ 873
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/887 (50%), Positives = 542/887 (61%), Gaps = 115/887 (12%)
Query: 1 MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS 60
M V GDLGFS L L+ S FP I L+IR KWR AVARKEEIKRLLILASEEAARAE E
Sbjct: 1 MLVPGDLGFSCLALL-SLFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAARAELE-- 57
Query: 61 YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
+ V V QCAVC+ PTTTRCARCKAVRYCSGKCQI+HWRQGHK+EC PPSI+H+
Sbjct: 58 ---TAAVSVSPQFQCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECNPPSITHQ 114
Query: 121 INDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKDD 180
I D +SQKA + ++ Y +R + E + KPI+ E S + S EV +DD
Sbjct: 115 IIDESISSSQKAVKQEKHAIYDNRLETEGQQCVKPIETFLSEPAFSKPNCSPEVSCEEDD 174
Query: 181 EVEVEFHADGEGASCTY-----------------ESSDASFSGFSASHTSSESSDDVSVC 223
++VEF ADG + T E SD S S TSSE SDDVSV
Sbjct: 175 HIKVEFLADGNVSDSTSKSSSTSFSGFSTSTDRAEPSD----NVSVSTTSSELSDDVSVS 230
Query: 224 ESIISNESEKLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFC 283
ESI S + EK DG S D + +++N + E P SP+F LVDSV++FT ++
Sbjct: 231 ESINSYDPEKSDGHKSDDSAMPETISSINTHQNE---PFSPEFTGLVDSVNSFTGSSKLN 287
Query: 284 ETKPGCSG-DLQCTPANSLGLGAS-HMNVNAERSTVSSSFWGRTLE---PKMDSCSDAAL 338
+ K CS + QC ++S S + A+ ST SS FW TL+ + + D+A
Sbjct: 288 QIKSSCSDVETQCRSSSSGLSIKSCNERSVAQPSTASSGFWEGTLDLNRTRNHAQDDSAQ 347
Query: 339 PDSNGASKSKLSDSRSSLLSSINESPS--PSLPEKSPKANVFSPKIVHPAVL-------- 388
++GA S +SDS S L S N S S P L + ++ HP+ L
Sbjct: 348 SYASGAD-SNISDSESVLRFSFNLSGSTIPPLHAEVSESKSTVLDDAHPSTLGIKKPIEG 406
Query: 389 ----------GNTRDTEGVVLMESTNMDAPEVKNSSSLNCKSSSHAVNGTKSGSHVVKSG 438
G + EGV E + A + +NS SL +SS+ +G + SH +KS
Sbjct: 407 VASSEKISTLGIKKPIEGVASSEKISTKALKFRNSPSLAFESSNLVDSGPSNDSHKLKSR 466
Query: 439 EVKSSVSLSSYGPPLSCVGRDSVCSNG-----------------LNISGGTSLRFEKSNI 481
EVK S S P G DS+ + +N G S + + +
Sbjct: 467 EVKPFSSSVSNAHPSCSTGGDSISIDAPKARSSSSLSSERSNHVVNGKSGASHQLKSREV 526
Query: 482 ------------------------------VTNDIGSSSNFVGMPSVPSVRSERFDNVQR 511
V +D+ SS+ G P VP+V+S + D V
Sbjct: 527 ESLSSGASDPHLSSSTEGHSVASMRSGKSTVDSDLHLSSSTRGHP-VPNVKSGKVDGVHT 585
Query: 512 SSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYEL 571
+A S+QI N V NGLKTS+ K VDQFR SK SK L +G GLFSYE+
Sbjct: 586 VAASSSQIANHSPIVSNGLKTSVRKVVDQFRPSKLSKS-LPLG----------GLFSYEV 634
Query: 572 FVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFT 631
FVKLY WNKVEL+PCGL+NCGNSCYAN VLQCLAFTPPLT+YFLQGLHSK C KK+WCFT
Sbjct: 635 FVKLYIWNKVELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFT 694
Query: 632 CELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA 691
CE E+LIL+AK+G SPLSP+GILS++++IGS LGNG+EEDAHEFLRYAID MQSVC++EA
Sbjct: 695 CEFESLILKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEA 754
Query: 692 GVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
GVNASG LE+ET+LIGLTFGGYLRSKIKC KCHGKSER ERMMDLTVEIEGDIG LEEAL
Sbjct: 755 GVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEAL 814
Query: 752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
++T TEILDGENKY+C RCKSYEKAKKKLT+ EAPNILTIALKRFQ
Sbjct: 815 HKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQ 861
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/835 (49%), Positives = 517/835 (61%), Gaps = 38/835 (4%)
Query: 1 MHVTGDLGFS-ILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEA 59
M VTGDLGFS ++++VV V I +IR KW+ + ARKEEIKRL ILA+EE ARAE EA
Sbjct: 1 MRVTGDLGFSSLVLVVVCVVVAVIGFVIRHKWQVSEARKEEIKRLFILAAEETARAEKEA 60
Query: 60 SYGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISH 119
SY Y T V CAVC+ P T RCA+CK+VRYCS +CQ VHWRQGHK EC+PPS +H
Sbjct: 61 SYEYGTAVSAAPTNLCAVCYFPATARCAQCKSVRYCSFECQTVHWRQGHKLECRPPSTTH 120
Query: 120 EINDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKD 179
+ + + K E + Y +S+ K +++SE D S +V KD
Sbjct: 121 QSDGATSDLGSKVVE----QGYSGIHVGKSESEGKECKIASERPPIFDICFSPKVSSGKD 176
Query: 180 DEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLS 239
+ VE A+G E S SFSGFSAS SS+SSD SVCESIISNE + +G
Sbjct: 177 ANIRVESLAEGNITDSNSELSSNSFSGFSASTGSSDSSDGSSVCESIISNEHDGSEGHTF 236
Query: 240 ADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCTPAN 299
D TLD+ DN ++ + SPKFA LVDSVD F+ + + T PG S + +N
Sbjct: 237 VDPTLDIPDNTID-DSMGVTMSSSPKFATLVDSVDGFSTMRKLNHTGPGFSKEESKLASN 295
Query: 300 SLGLGASHMNVNAERSTVSSSFWGRTLEPK--MDSCSDAALPDSNGASKSKLSDSRSSLL 357
+ E STV S FW + L+ + D + P + S K + S SS
Sbjct: 296 GNSGSSMWKGKTIEPSTVFSGFWDKALDSRGIKDDTKNDTYPSCSDESTGKKTASESSFH 355
Query: 358 SSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGVVLMESTNMDAPEVKNSSSLN 417
S P L + K N P +GN + G E+ NM++ + +N S +N
Sbjct: 356 FPF--STMPPLHVRDTKTNDSVSDDAFPNCIGNNMASSGSASSENDNMNSSKGRNFSFIN 413
Query: 418 CKSSSHAVNGTKSGSHVVKSGEVKSSVS----LSSYGPPLSCVGRDSVCSNGLNI----- 468
K S+ T SGS +S +++S S LSS+ P S VG++SVC++ L+
Sbjct: 414 SKVSNVRSYVTPSGS---ESDQLESKESSGPPLSSFSPQPSSVGKNSVCADALSFHNSQS 470
Query: 469 SGGTSLRFEK--SNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRS---------SAMSA 517
+G ++L S + + +IG + + ++ SV E + ++ + S+
Sbjct: 471 TGSSNLVVANGGSTLKSTEIGCLTCELADSNLASVTEEHHSSTKQGNNDIESGTRAVTSS 530
Query: 518 QIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQC-LSVGCETAGRYSDKGLFSYELFVKLY 576
Q+ + +N +GLKTS+ K VDQFRGS SK L VG + AGR +DK F YELFVKLY
Sbjct: 531 QVASCSANSKSGLKTSVLKVVDQFRGSNLSKHFPLVVGSDLAGRRNDKSFFPYELFVKLY 590
Query: 577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
N NKVEL P GL+NCGNSCYAN VLQCLAFTPPLTAY LQGLH K CA K WCFTCE E
Sbjct: 591 NSNKVELCPFGLVNCGNSCYANAVLQCLAFTPPLTAYLLQGLHLKSCANKKWCFTCEFER 650
Query: 637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
LIL++KD KS +SP+GI+S LQ+IGSQLGNGREEDAHEFLR+ IDTMQSVC+ EAGVNAS
Sbjct: 651 LILKSKDTKSAVSPMGIISHLQNIGSQLGNGREEDAHEFLRHVIDTMQSVCLTEAGVNAS 710
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
G LE++TTL+G TFGGYLRSKIKC +C GKSE QERMMDLTVEIEG+I L EALRR+T
Sbjct: 711 GSLEEDTTLMGQTFGGYLRSKIKCMRCGGKSEHQERMMDLTVEIEGEITTLVEALRRFTS 770
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPL--PISF 807
TE LDGENKY C RCKSYEKAKKKLT+ EAPN+LT+ALKRFQ F L PI F
Sbjct: 771 TETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQF 825
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/836 (49%), Positives = 518/836 (61%), Gaps = 37/836 (4%)
Query: 1 MHVTGDLGFS-ILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEA 59
M VTGDLGFS ++++VV V P I +IRRKW+ + ARK+EIKRLL+LA+EE ARAE EA
Sbjct: 1 MRVTGDLGFSSLVLVVVCVVLPVIGFVIRRKWQVSEARKDEIKRLLVLAAEETARAEKEA 60
Query: 60 SYGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISH 119
SY Y T V CAVC+ P T RCA+CK+VRYCS +CQ VHWRQGHK EC+PPS +
Sbjct: 61 SYEYGTAVSAAPSNLCAVCYFPATARCAQCKSVRYCSFECQTVHWRQGHKLECRPPSTTC 120
Query: 120 EINDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKD 179
+DV + +K E + Y +S+ K +++SE+S SD S +V KD
Sbjct: 121 WSDDVASDHGRKLVE----QGYSGIHVEKSESEGKECKVASEKSPISDICFSPKVSPGKD 176
Query: 180 DEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLS 239
+ VE A+G E S SFSGFSAS S++SSDD SVCESIISNE + G
Sbjct: 177 GNIRVESLAEGNITDSNSELSSNSFSGFSASTGSNDSSDDSSVCESIISNEHDGSKGHTF 236
Query: 240 ADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCTPAN 299
D TLD+ DN + + SPKFA LVDSVD F+ +++ T PG S + +N
Sbjct: 237 VDPTLDIPDNTSD-DCMGVTMSTSPKFATLVDSVDGFSTMHKLNHTGPGFSKEESKLASN 295
Query: 300 SLGLGASHMNVNAERSTVSSSFWGRTLEP---KMDSCSDAALPDSNGASKSKLSDSRSSL 356
+ E STV S FW + L+ K D+ +D S+ ++ + S
Sbjct: 296 GNPGSSMWKGKTIEPSTVVSGFWDKALDSRGIKDDTKNDTHPSCSDESTGKRTVSESSFH 355
Query: 357 LSSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGVVLMESTNMDAPEVKNSSSL 416
S SP L + K N P +GN + G E+ M++ + +N S +
Sbjct: 356 FSFSTMSP---LHVRDTKTNDSVSDDAFPNCIGNDMASSGSASSENDKMNSSKGRNFSFI 412
Query: 417 NCKSSSHAVNGTKSGSHVVK-SGEVKSSVSLSSYGPPLSCVGRDSVCSNGLNI------- 468
N K SS T SGS + + S LSS+ P S V ++SVC++ LN
Sbjct: 413 NSKVSSVRSYVTPSGSESDQLESKDSSGPPLSSFSPQSSSVDKNSVCADALNFHILQSTG 472
Query: 469 ---------SGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRS---SAMS 516
+ G++L+ + +T ++ S+ G +++ +N S + S
Sbjct: 473 SKVSNHVVDNRGSTLKSTEIGFLTRELADSNLASGTEEHSHSSTKQGNNDIESGTQTVTS 532
Query: 517 AQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQC-LSVGCETAGRYSDKGLFSYELFVKL 575
+Q+ + +N +GLKTS+ K VDQFRGS SK L+VG + AGR++DK F YELFVKL
Sbjct: 533 SQVASCSANSKSGLKTSVLKVVDQFRGSNLSKHFPLAVGSDIAGRHNDKSFFPYELFVKL 592
Query: 576 YNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE 635
YN NKVEL P GLINCGNSCYAN VLQCLAFTPPLTAY LQG HSK CA K WCFTCE E
Sbjct: 593 YNSNKVELCPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGSHSKSCANKKWCFTCEFE 652
Query: 636 NLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
LIL++KD KS +SP+GI+S LQ+IGSQL NGREEDAHEFLR+ IDTMQSVC+ EAGVNA
Sbjct: 653 RLILKSKDTKSAVSPMGIISHLQNIGSQLANGREEDAHEFLRHVIDTMQSVCLMEAGVNA 712
Query: 696 SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYT 755
G LE++TTL+G TFGGYL SKIKC +C GKSERQERMMDLTVEIEG+I L EALRR+T
Sbjct: 713 LGSLEEDTTLMGQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIEGEITTLVEALRRFT 772
Query: 756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPL--PISF 807
TE LDGENKY C RCKSYEKAKKKLT+ EAPN+LT+ALKRFQ F L PI F
Sbjct: 773 STETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQF 828
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 390/778 (50%), Positives = 487/778 (62%), Gaps = 75/778 (9%)
Query: 63 YSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHEIN 122
Y T + QC VCF P TTRC+RCKAVRYCSGKCQI+HWRQGHK+EC+ P ++ IN
Sbjct: 26 YGTVPVSKNNYQCVVCFCPRTTRCSRCKAVRYCSGKCQIIHWRQGHKEECRRPPTTYHIN 85
Query: 123 DVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKDDEV 182
D G Q+AA+ DQ + Y R++ +PI+ S E SD S S V KDD++
Sbjct: 86 DDGGNPGQRAAKQDQHDIYDGRYE------KRPIETFSVEPVVSDSSYSPGVSLLKDDDI 139
Query: 183 EVEFHADGEGASCTYESSDASFSGFS----------ASHTSSESSDDVSVCESIISNESE 232
V+ D EGA ES SFSGFS ++H++ ESSD VSV ESI SNE+E
Sbjct: 140 IVDSVLDTEGADSISESPGTSFSGFSTPTGSSFSGFSAHSNGESSDSVSVSESISSNETE 199
Query: 233 KLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGD 292
D ADI D L++++N ++ KP SPKFA LVDS+ +F KL +K D
Sbjct: 200 GSDRQTPADIAPDTLESSVN--EVATTKPSSPKFATLVDSIGSFNKL-----SKSNHGND 252
Query: 293 LQCTPANSLGLG---ASHMNVNAERSTVSSSFWGRTLE---PKMDSCSDAALPDSNGASK 346
+ ++S A + + + VSS FW RTL+ P D+ +AL + NG
Sbjct: 253 RESQCSSSSSSHSISAGNDETITKPAKVSSGFWWRTLDSVGPSSDAGDGSALSNFNGPGN 312
Query: 347 SKLSDSRSSLLSSINESPSPSL--PEKSPKANVFSPKIVHPAVLGNTRDTEGVVLMESTN 404
SK S+ + SLL N S S +L KS K N P+V G +R +G V E
Sbjct: 313 SKSSNDKPSLLFKSNLSGSDALISHAKSSKVNNIISDDAPPSVPGVSRPADGAVSPEKNG 372
Query: 405 MDAPEVKNSSSLNCKSSSHAVNGTKSGSHVVKSGEVK------SSVSLSSYGPPLSCVGR 458
DA +VK S +++ + S+ N + GS+V + + VS SS G L
Sbjct: 373 FDALKVKRSPTISFERSNLVDNNSGGGSNVSIESKSVSSSSPYAHVSFSSGGVKLDPSA- 431
Query: 459 DSVCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSE-------------- 504
VC + +LR E+SN+V +DI +S+ S
Sbjct: 432 SKVCRS-------QALRSERSNVVVDDIVDTSHLSKYRLSSSASQTHLNSSVGGHSVSSV 484
Query: 505 ----RFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGR 560
+ +NV+ +A ++QI + + NGLK+S+WK VDQFRG K GR
Sbjct: 485 KLGGKVENVEPGAAATSQISSYSPSSINGLKSSVWKVVDQFRGPK------------CGR 532
Query: 561 YSDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHS 620
YS+KGLF Y+LFVKLY NKVE++PCGLINCGNSCYAN VLQCLAFTPPLT+YF+QGLHS
Sbjct: 533 YSNKGLFPYDLFVKLYTSNKVEMRPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHS 592
Query: 621 KECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAI 680
K C KK+ CF+CE E +IL+AK+GKSPLSPIGILS+LQ+IGSQLGNGREEDAHEFLRYAI
Sbjct: 593 KACVKKERCFSCEFEKVILKAKEGKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAI 652
Query: 681 DTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
D MQSVC++EA VNA E+E TLIGLTFGGYLRSKIKC KCH KSE QERMMDLTVEI
Sbjct: 653 DAMQSVCLKEARVNAVDSFEEEATLIGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEI 712
Query: 741 EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
EGDIG LE+ALRR+TGTEILDG+NKY+C RC+SYEKAKKKLTI+EAPN+LTIALKRFQ
Sbjct: 713 EGDIGKLEDALRRFTGTEILDGDNKYQCGRCRSYEKAKKKLTILEAPNVLTIALKRFQ 770
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 389/852 (45%), Positives = 478/852 (56%), Gaps = 152/852 (17%)
Query: 1 MHVTGDLGFSILVLVVSF--VFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFE 58
M VT DLGF + + F V P I IR KWRRA R EE++RLLI A+EE+AR E E
Sbjct: 1 MRVTVDLGFYSFLFIALFCVVLPVIGFFIRYKWRRAAERAEEVRRLLIFAAEESARVERE 60
Query: 59 A--SYGYSTTV--------YVP-----------------------QHPQCAVCFSPTTTR 85
A SY Y T VP ++ QCAVCFSPTTTR
Sbjct: 61 AATSYQYVTAANSYQIQNDAVPASYQYVNKNLYQNVAVSVAKNKNKNNQCAVCFSPTTTR 120
Query: 86 CARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHEIN------DVGNFTSQKAAEPDQSE 139
C++CK V YCS KCQ HWRQGHKD+C PP + + D+G +K EPD
Sbjct: 121 CSKCKLVHYCSAKCQFAHWRQGHKDKCHPPGTARQSQADNLECDIG----KKVVEPDHRG 176
Query: 140 AYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRK-----DDEVEVEFHADGEGAS 194
++ + ES E+ SS++ S+V K +D VE A+ A
Sbjct: 177 INDEKSRVESP----------EDRTSSEKPPFSDVKPPKISCAANDNARVESLAEENTAD 226
Query: 195 CTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLSADITLDMLDNALNVK 254
E S SFSGFSAS ++ESSDD S CESIISNE + +G + D T D LDN N
Sbjct: 227 SNSELSCNSFSGFSASTGANESSDDSSGCESIISNEHVRSEGHICTDPTFDDLDNTSNGH 286
Query: 255 KLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCTPANSLGLGASHMNVNAER 314
+ PLSPKFA LVDSV + F + +++ T GL + E
Sbjct: 287 SIGATIPLSPKFASLVDSV-----IPVFGKE------EIKLTSNGRSGL-TTQKGGTTEP 334
Query: 315 STVSSSFWGRTLEPKMDSCSDAALPDSNGASKSKLSDSRSSLLSSINESPSPSLPEKSPK 374
S SS FW TL+ K G +D+ L S NES + S+ + P
Sbjct: 335 SNASSEFWNCTLDLK-------------GTKDDSFADT---LPSHSNESRTKSVGKNIPH 378
Query: 375 ANVFSPKIVHPAVLGNTRDTEGVVLMESTNMDAPEVKNSSSLNCKSSSHAVNGTKSGSHV 434
A S EG L+ S DA + NS ++ K S+H +S
Sbjct: 379 AGSGSGSF----------QNEG--LVSSRRADASSINNSYTVASKVSNHVTINPRSS--- 423
Query: 435 VKSGEVKSSVSLSSYGPPLSCVGRDSVCSNGLNISGGTSLRFEKSNIVTND-----IGSS 489
++S EV SC R S S +V+ D I S
Sbjct: 424 LRSTEV-------------SCFPRTSA----------------DSKLVSKDEEEEHIHYS 454
Query: 490 SNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVD--QFRGSKSS 547
S + + + +A Q+ N N +GLK S+ K VD QFRGS S
Sbjct: 455 SKC------------KKNGTRSGTACPVQVANCSPNSKDGLKASVLKVVDHDQFRGSNLS 502
Query: 548 KQC-LSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAF 606
K ++VG + AG+YSDKGLF Y+LFVKLYNWN+ E QP GL NCGNSCYAN VLQCL F
Sbjct: 503 KHFPVAVGGDIAGKYSDKGLFPYDLFVKLYNWNRAEFQPFGLTNCGNSCYANAVLQCLVF 562
Query: 607 TPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666
TPPLTAY LQGLHSK CA K WCFTCE E+LIL++KD K PLSPIGILS+LQSIGSQLGN
Sbjct: 563 TPPLTAYLLQGLHSKSCASKKWCFTCEFESLILKSKDTKFPLSPIGILSQLQSIGSQLGN 622
Query: 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGK 726
GREEDAHEFLR+ ++TMQSVC+ E GV+AS L+++T L+GLTFGGYLRSKI+C KC GK
Sbjct: 623 GREEDAHEFLRHVVETMQSVCLMECGVDASDALKEQTNLVGLTFGGYLRSKIQCMKCGGK 682
Query: 727 SERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEA 786
SERQERMMDLTVEIEG+I +LEEAL+++T TE LDGENKY C RCKSYEKAKK++ + EA
Sbjct: 683 SERQERMMDLTVEIEGEITSLEEALKQFTSTETLDGENKYHCGRCKSYEKAKKQMAVSEA 742
Query: 787 PNILTIALKRFQ 798
PN+LTIALKRF+
Sbjct: 743 PNVLTIALKRFR 754
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 390/819 (47%), Positives = 492/819 (60%), Gaps = 44/819 (5%)
Query: 1 MHVTGDLGF-SILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEA 59
M VTGDLGF S++++VV V P I +IRRKW+ AVAR EEIKRLLILA+EE AR E E
Sbjct: 1 MRVTGDLGFRSLVLVVVCVVVPVIGFVIRRKWQIAVARNEEIKRLLILAAEETARVERET 60
Query: 60 SYGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISH 119
Y V + QCA+C+ P T RCA+CK+VRYCS CQ VHW QGHK +C+PPS +H
Sbjct: 61 LYSSGAVVSATNNYQCALCYFPATARCAKCKSVRYCSTGCQTVHWHQGHKFDCRPPSKTH 120
Query: 120 EINDVGNFTSQKAAEPDQS---EAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQ 176
N V + ++ E D S E + E K+P + D S EV
Sbjct: 121 RSNGVSDI-GKRELEHDYSGNHEEKSENRGAECKIPYE------------DTGFSPEVSF 167
Query: 177 RKDDEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDG 236
KDD + F A+ A E S SFSGFSAS +S +SSDD SVCESIISNE + +G
Sbjct: 168 GKDDNIRAGFLAEENLADSNSEFSSNSFSGFSASTSSGDSSDDSSVCESIISNEHDISEG 227
Query: 237 PLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCT 296
+S TLD+ D K++ SPKFA L+DSVD + +++ PG S + +
Sbjct: 228 HVSVAHTLDLTDKTTIDSKVDAAMSSSPKFASLLDSVDGSSTVHKLNHVAPGSSNEERKV 287
Query: 297 PANSLGLGASHMNVNAERSTVSSSFWGRTLEPKMDSCSDAALPDSNGASKSKLSDSRSSL 356
+N LG+S + S FW + L+ + D P + S + +DS S
Sbjct: 288 GSNG-ALGSS---IGKGAKIEPSGFWDKALDSR--GIKDDTYPSHSDESAGEKTDSGLSF 341
Query: 357 LSSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGVVLMESTNMDAPEVKNSSSL 416
S +P L + KA S P +G G E+ + + + +N S +
Sbjct: 342 --RFQFSTTPPLHIQDTKAKESSNDDTLPNPVGKNMPHPGPASSENV-IHSSKARNLSFI 398
Query: 417 NCKSSSHAVNGTKSGS-HVVKSGEVKSSVSLSSYGPPLSCVGRDSVCSNGLNISGGTSLR 475
N K ++ ++ T GS H + +S L S+ S +G+D ++ ++I S
Sbjct: 399 NGKDAN-IMSTTPGGSEHDQLESKDRSEPPLYSFSSQTSSIGKDPGSADAMSIHNFQSSS 457
Query: 476 FEKSNIVTNDIG---------------SSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
SN V ++ G + S V V S + + + S+
Sbjct: 458 SVASNHVMDNHGCTLKSTDIRCQTRGLADSKLVSTIEVNSHPGTKHRKNEYGTVTSSHAA 517
Query: 521 NSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVG-CETAGRYSDKGLFSYELFVKLYNWN 579
+ +N +GLKTS+ K VDQFRGS SK S + AG+Y+DKG F YE FVKLYN N
Sbjct: 518 SYSANSKSGLKTSVLKVVDQFRGSNLSKHVPSAARSDIAGKYNDKGFFPYETFVKLYNSN 577
Query: 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLIL 639
KVEL+P GLIN GNSCYAN VLQCLAFTPPL+AY +QGLHSK C+ K WCF CE E LI
Sbjct: 578 KVELRPFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCSNKTWCFICEFERLIF 637
Query: 640 RAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPL 699
++KD KSPLSP GILS+LQSIGSQLGNG+EEDAHEFLR+AIDTMQSVC+ EAG+NASG
Sbjct: 638 KSKDTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLMEAGINASGSS 697
Query: 700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
E++TTL+G TFGGYLRSKIKC KC GKSERQERMMDLTVEIEG+I L EALRR+T TE
Sbjct: 698 EEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTET 757
Query: 760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
LDGENKY C RCKSY+KAKKKLT+ EAPNILT+ALKRFQ
Sbjct: 758 LDGENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQ 796
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461409|ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 379/837 (45%), Positives = 485/837 (57%), Gaps = 68/837 (8%)
Query: 1 MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS 60
M V GDLGF LVL V VFP I L +R KW+ +ARKEEI RLL+ ASEEAAR E +AS
Sbjct: 1 MLVAGDLGFQSLVLTVCLVFPIIGLFLRHKWQLGMARKEEINRLLMFASEEAARVELQAS 60
Query: 61 YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPP----- 115
+G H CA+C SPTTTRCARCKAVRYCSG+CQI+HWRQGHK+ECQPP
Sbjct: 61 FGCIPAPISLNH-HCALCLSPTTTRCARCKAVRYCSGRCQIIHWRQGHKNECQPPKTLDW 119
Query: 116 SISHEINDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVP 175
S+ E + N +Q + S +Y F ++ +P ++ + S D S S VP
Sbjct: 120 SLEKENDPKDNLENQ-----NHSGSYDKNFDTDNGEHVEPDKILFAKHASPD-SGYSSVP 173
Query: 176 QRKDDEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLD 235
+ D + V+ HAD E S T + D + F S ESSDD SV E+ + S + D
Sbjct: 174 SQND--ISVKLHADEEENS-TPKLPDTTSYEFHTSALDIESSDDASVSENNSESGSPRSD 230
Query: 236 GPLSADITLDM---LDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNR-----FCETKP 287
G LSA+ + DM LNV + KPLS A LV+SVD + KL F P
Sbjct: 231 GYLSAENSFDMDGATSKVLNVDH-DPNKPLSSNNAHLVNSVDIYAKLKTESQLVFNRIGP 289
Query: 288 GCSGDLQCTPANSLGLGASHMNVNAERSTVSSSFWGRTLEPKMDSCSDAALPDSNGASKS 347
+ L+ S+ N+E + G+ + K D D+ +SNGA+
Sbjct: 290 EYNIPLKAAKVRSVAGSGEVTPSNSEENN------GKFVGAKGDVREDSVPSNSNGANNR 343
Query: 348 KLSDSRSSLLSSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGV------VLME 401
S+ S L S SLP + ++N ++ GN T G+ L+
Sbjct: 344 NFSEGHSLLHFSF------SLPGVTSQSNAQVAEVNEHVADGNLPTTSGMNRTVESSLLL 397
Query: 402 STNMDAPEVKNSSSLNCKSSSHAVNGTKSGSHVVKSGEVKSSVSLSSYGPPLSCVGRDSV 461
N ++ +V+NS S +CK S VN K + V SS S + P S S+
Sbjct: 398 DINTESLKVRNSPS-SCKGSQDKVNTAKGLPNHCVVNSVSSSSSFINPFPVASKFESRSI 456
Query: 462 CSNGLNISGGTSLRFEKSNIVTNDIGSSSNF--------------VGMPS------VPSV 501
+ NIS + E+ V + G++S+ V +P VP
Sbjct: 457 RDS--NISMSIPTKSERLGSVFIEPGTTSSISKHSGNGSLVDGSSVHLPPSNGREPVPPT 514
Query: 502 RSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY 561
S + Q S+ +S+ N S G + A ++ + SKS + ++ G AG+
Sbjct: 515 DSRKIGTTQVSAGVSSLDANFSSKSAYGFRPF---APNELKRSKSHRGYVANGGGNAGKC 571
Query: 562 SDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK 621
++K YELFV LYNWNKVELQP GL+NCGNSCYANVVLQCL FTPPLTAYFLQGLHSK
Sbjct: 572 NNKEDSLYELFVNLYNWNKVELQPSGLVNCGNSCYANVVLQCLTFTPPLTAYFLQGLHSK 631
Query: 622 ECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
CAK+ WCFTCE E+LIL AK+GKSPLSP I+S+L+ IGSQL NG+EEDAHEFLR AID
Sbjct: 632 ACAKERWCFTCEFESLILEAKEGKSPLSPFRIISQLRKIGSQLVNGKEEDAHEFLRCAID 691
Query: 682 TMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741
TMQS+C EA + SGP+E+ETTLIGLTFGGYL SKIKCT+C KSER ER++DLTVEI
Sbjct: 692 TMQSICFMEAQASRSGPVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDLTVEIS 751
Query: 742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
GDI +EEAL++YT EILDG+N+Y C RC SY KA+K+L+I+EAPNILTIALKRFQ
Sbjct: 752 GDIETIEEALQQYTSPEILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALKRFQ 808
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449511450|ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 375/833 (45%), Positives = 481/833 (57%), Gaps = 68/833 (8%)
Query: 5 GDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEASYGYS 64
GDLGF LVL V V P I +R KW+ +ARKEEI RLL+ ASEEAAR E +AS+G
Sbjct: 7 GDLGFQSLVLTVCLVXPIIGSFLRHKWQLGMARKEEINRLLMFASEEAARVELQASFGCI 66
Query: 65 TTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPP-----SISH 119
H CA+C SPTTTRCARCKAVRYCSG+CQI+HWRQGHK+ECQPP S+
Sbjct: 67 PAPISLNH-HCALCLSPTTTRCARCKAVRYCSGRCQIIHWRQGHKNECQPPKTLDWSLEK 125
Query: 120 EINDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKD 179
E + N +Q + S +Y F ++ +P ++ + S D S S VP + D
Sbjct: 126 ENDPKDNLENQ-----NHSGSYDKNFDTDNGEHVEPDKILFAKHASPD-SGYSSVPSQND 179
Query: 180 DEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLS 239
+ V+ HAD E S T + D + F S ESSDD SV E+ + S + DG LS
Sbjct: 180 --ISVKLHADEEENS-TPKLPDTTSYEFHTSALDIESSDDASVSENNSESGSPRSDGYLS 236
Query: 240 ADITLDM---LDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNR-----FCETKPGCSG 291
A+ + DM LNV + KPLS A LV+SVD + KL F P +
Sbjct: 237 AENSFDMDGATSKVLNVDH-DPNKPLSSNNAHLVNSVDIYAKLKTESQLVFNRIGPEYNI 295
Query: 292 DLQCTPANSLGLGASHMNVNAERSTVSSSFWGRTLEPKMDSCSDAALPDSNGASKSKLSD 351
L+ S+ N+E + G+ + K D D+ +SNGA+ S+
Sbjct: 296 PLKAAKVRSVAGSGEVTPSNSEENN------GKFVGAKGDVREDSVPSNSNGANNRNFSE 349
Query: 352 SRSSLLSSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGV------VLMESTNM 405
S L S SLP + ++N ++ GN T G+ L+ N
Sbjct: 350 GHSLLHFSF------SLPGVTSQSNAQVAEVNEHVADGNLPTTSGMNRTVESSLLLDINT 403
Query: 406 DAPEVKNSSSLNCKSSSHAVNGTKSGSHVVKSGEVKSSVSLSSYGPPLSCVGRDSVCSNG 465
++ +V+NS S +CK S VN K + V SS S + P S S+ +
Sbjct: 404 ESLKVRNSPS-SCKGSQDKVNTAKGLPNHCVVNSVSSSSSFINPFPVASKFESRSIRDS- 461
Query: 466 LNISGGTSLRFEKSNIVTNDIGSSSNF--------------VGMPS------VPSVRSER 505
NIS + E+ V + G++S+ V +P VP S +
Sbjct: 462 -NISMSIPTKSERLGSVFIEPGTTSSISKHSGNGSLVDGSSVHLPPSNGREPVPPTDSRK 520
Query: 506 FDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKG 565
Q S+ +S+ N S G + A ++ + SKS + ++ G AG+ ++K
Sbjct: 521 IGTTQVSAGVSSLDANFSSKSAYGFRPF---APNELKRSKSHRGYVANGGGNAGKCNNKE 577
Query: 566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
YELFV LYNWNKVELQP GL+NCGNSCYANVVLQCL FTPPLTAYFLQGLHSK CAK
Sbjct: 578 DSLYELFVNLYNWNKVELQPSGLVNCGNSCYANVVLQCLTFTPPLTAYFLQGLHSKACAK 637
Query: 626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
+ WCFTCE E+LIL AK+GKSPLSP I+S+L+ IGSQL NG+EEDAHEFLR AIDTMQS
Sbjct: 638 ERWCFTCEFESLILEAKEGKSPLSPFRIISQLRKIGSQLVNGKEEDAHEFLRCAIDTMQS 697
Query: 686 VCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG 745
+C EA + SGP+E+ETTLIGLTFGGYL SKIKCT+C KSER ER++DLTVEI GDI
Sbjct: 698 ICFMEAQASRSGPVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDLTVEISGDIE 757
Query: 746 NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+EEAL++YT EILDG+N+Y C RC SY KA+K+L+I+EAPNILTIALKRFQ
Sbjct: 758 TIEEALQQYTSPEILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALKRFQ 810
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata] gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 361/830 (43%), Positives = 478/830 (57%), Gaps = 109/830 (13%)
Query: 1 MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS 60
M + DLG S LVLV+S V P I L +R KWR A R+EEI+RLLI AS+EAARAE EAS
Sbjct: 1 MLLVLDLGISTLVLVISLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASQEAARAELEAS 60
Query: 61 YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
+S+ V + C VC+ TTRC+RCK+VRYCSGKCQI+HWRQGHKDEC+P SI ++
Sbjct: 61 VEFSS-VAISNIFHCPVCYCIATTRCSRCKSVRYCSGKCQIIHWRQGHKDECRPASIVYD 119
Query: 121 INDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPI-QMSSEESESSDRSSSSEVPQRKD 179
D + + + E ++ + + + PI + S + ++ KD
Sbjct: 120 SEDEKSDSDLRFREENERNTLEETLLLDPQPVIIPIGETILSNPARSPEDGNGDIADNKD 179
Query: 180 DEVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLS 239
D + D E A E+S +SFSG +S ++S D++S+CES S+ESE+ + L
Sbjct: 180 DLI------DKEEAVSVAETSGSSFSG-FSSSPRNDSGDEISLCESFSSSESERSESLLD 232
Query: 240 ADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGC-SGDLQCTPA 298
A ++++ D + K LSPKF LV+SVDN L + KPG +G Q
Sbjct: 233 AHVSVEPEDTCFSTIDDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPGGDTGQNQSQSR 292
Query: 299 NSLGLGASHMNVNAERSTV-SSSFWGRTL---EPKMDSCS--------DAALPDSNGASK 346
+ L V+ + S + SS FWG L E +SC +++L S G+S+
Sbjct: 293 SLHSLVTDRHPVSTDPSPLKSSDFWGTALGSAERVTESCDKSKSGRPGNSSLHFSFGSSR 352
Query: 347 ----SKLSDSRSSLLSSINESPSPSLPE----KSPKANVFSPKIVHPAVLGNTRDTEGVV 398
+K+S+ + S+L E+PS +L K A +F D +
Sbjct: 353 DTSAAKVSEHKRSIL---KEAPSAALGTGNNLKERNAKIF--------------DEAEIA 395
Query: 399 LMESTNMDAPEVKNSSSL------NCKSSSHAVNGTKSGSHVVKSGEVKSSVSLSSYGPP 452
L S++ DAP ++S+L KS+S + NG +K GEV+ S +S
Sbjct: 396 LPTSSSTDAPSPLDTSNLPHVTLQKLKSAS-SENGCMLAP--LKVGEVQLLASKAS---- 448
Query: 453 LSCVGRDSVCSNGLNIS--GGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQ 510
C++ + S G S+R D+ +
Sbjct: 449 -----NTKECADLMKHSPLGAKSVRV-----------------------------LDHQK 474
Query: 511 RSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYE 570
++ A +I S N +GLK S+ K VDQ+ KS E AGR+ KGLF YE
Sbjct: 475 QNGAAVHRI--SSLNGRSGLKASVLKVVDQWTRPKSEN-------EMAGRHGHKGLFPYE 525
Query: 571 LFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF 630
+F KLY NK+E QPCGLIN GNSC+ANVV QCL FTPPLT YFLQ LHS+ C KK+ CF
Sbjct: 526 VFAKLYT-NKIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQCF 584
Query: 631 TCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE- 689
TC E L+L+AK+GKSPLSP G+LS+LQ+IG LGNG+EEDAHEFLR+ +DTMQSVCI+
Sbjct: 585 TCGFEKLVLKAKEGKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKA 644
Query: 690 -EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLE 748
E + S LED TTLIGLTFGGYLRSKIKC KC KSE +E+MMDLTVEI+GDI L+
Sbjct: 645 SEYDMPKSSKLED-TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLD 703
Query: 749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+ALRR+T TEILDG+NKY+C CKSYE+AKKKL I + PN+LTIALKRFQ
Sbjct: 704 DALRRFTRTEILDGDNKYRCGSCKSYERAKKKLKITDPPNVLTIALKRFQ 753
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| TAIR|locus:2121959 | 1008 | UBP16 "ubiquitin-specific prot | 0.355 | 0.284 | 0.625 | 7.2e-133 | |
| TAIR|locus:2168282 | 731 | UBP17 "AT5G65450" [Arabidopsis | 0.335 | 0.370 | 0.640 | 5.5e-113 | |
| TAIR|locus:2124809 | 631 | UBP18 "AT4G31670" [Arabidopsis | 0.288 | 0.369 | 0.572 | 4e-83 | |
| TAIR|locus:2046678 | 672 | UBP19 "AT2G24640" [Arabidopsis | 0.288 | 0.346 | 0.576 | 4e-83 | |
| DICTYBASE|DDB_G0274827 | 919 | DDB_G0274827 "putative ubiquit | 0.392 | 0.344 | 0.343 | 8e-42 | |
| POMBASE|SPCC1682.12c | 457 | ubp16 "ubiquitin C-terminal hy | 0.389 | 0.687 | 0.338 | 5.4e-40 | |
| MGI|MGI:1924050 | 1324 | Usp42 "ubiquitin specific pept | 0.273 | 0.166 | 0.395 | 9e-40 | |
| RGD|1305231 | 1325 | Usp42 "ubiquitin specific pept | 0.273 | 0.166 | 0.395 | 9e-40 | |
| UNIPROTKB|Q9H9J4 | 1324 | USP42 "Ubiquitin carboxyl-term | 0.273 | 0.166 | 0.391 | 1.2e-39 | |
| UNIPROTKB|E2RHU7 | 1331 | USP42 "Ubiquitin carboxyl-term | 0.273 | 0.166 | 0.391 | 1.2e-39 |
| TAIR|locus:2121959 UBP16 "ubiquitin-specific protease 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 921 (329.3 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
Identities = 187/299 (62%), Positives = 222/299 (74%)
Query: 502 RSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY 561
+S R + Q+ + Q NS +GLK S+ K VDQ+ KS E AGR+
Sbjct: 467 KSVRVLDHQKQNGAVVQHINSLHG-RSGLKASVLKVVDQWTRPKSEN-------EMAGRH 518
Query: 562 SDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK 621
KGLF YE+F KLY + K+E QPCGLIN GNSC+ANVV QCL FTPPLT YFLQ HS+
Sbjct: 519 GHKGLFPYEVFAKLYTY-KIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSR 577
Query: 622 ECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
C KK+ CFTC E L+++AK+ KSPLSP G+LS+LQ+IG LGNG+EEDAHEFLR+ +D
Sbjct: 578 ACTKKEQCFTCGFEKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVD 637
Query: 682 TMQSVCIE--EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVE 739
TMQSVCI+ E + S LED TTLIGLTFGGYLRSKIKC KC KSE +E+MMDLTVE
Sbjct: 638 TMQSVCIKASEYDMTKSSKLED-TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVE 696
Query: 740 IEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
I+GDI L++ALRR+T TEILDGENKY+C CKSYE+AKKKL I E PN+LTIALKRFQ
Sbjct: 697 IDGDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQ 755
|
|
| TAIR|locus:2168282 UBP17 "AT5G65450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 890 (318.4 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 182/284 (64%), Positives = 214/284 (75%)
Query: 528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCG 587
+GLKTS+ K V FR +SSK+ D+ FSYELFVKLY ++VELQP G
Sbjct: 278 SGLKTSVQKVVQHFRPPQSSKK------SQPSSSIDEMSFSYELFVKLY-CDRVELQPFG 330
Query: 588 LINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSP 647
L+N GNSCYAN VLQCLAFT PL +Y ++GLHSK C KK WCF CE E+LIL+A+ G+SP
Sbjct: 331 LVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGESP 390
Query: 648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIG 707
LSPI ILS+LQ IG LG G+EEDAHEFLR A+DTMQSV ++EA A+GP +ETTL+G
Sbjct: 391 LSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAP--AAGPFAEETTLVG 448
Query: 708 LTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYK 767
LTFGGYL SKIKC C KSER E MMDLTVEI+GDIG+LEEAL ++T E+LDGEN+Y
Sbjct: 449 LTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYF 508
Query: 768 CDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPL--PISF 807
C RCKSY+KAKKKL I+E PNILT+ LKRFQ F L PI F
Sbjct: 509 CGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHF 552
|
|
| TAIR|locus:2124809 UBP18 "AT4G31670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 726 (260.6 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 134/234 (57%), Positives = 169/234 (72%)
Query: 566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
LF YE FV+ +NW+ EL PCGL+NCGNSC+ANV+LQCL++T PL AY L+ H +EC +
Sbjct: 148 LFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMR 207
Query: 626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
DWCF CE + + RA + P SP+ I+SRL +IG LG GR+EDAHEF+RYAID MQS
Sbjct: 208 NDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQS 267
Query: 686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
VC++E G P ETTLI FGG L+S+++CT C+ S++ E MMDL VE+ GD
Sbjct: 268 VCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA 327
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
G+LEE L ++T E L G+N YKCDRC Y KA K+LTI APNILTIALKR+Q
Sbjct: 328 GSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ 381
|
|
| TAIR|locus:2046678 UBP19 "AT2G24640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 713 (256.0 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 135/234 (57%), Positives = 167/234 (71%)
Query: 566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
LF YE FV+ YNW++ + PCGL NCGNSC+ANVVLQCL++T PL AY L+ H +EC +
Sbjct: 154 LFPYESFVRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRR 213
Query: 626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
DWCF CE EN + RA + P SP+ I+SRL +IG LG GR+EDAHE +R+AID MQS
Sbjct: 214 NDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQS 273
Query: 686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
VC++E G P ETTLI FGG L+S+++CT C S++ E MMDLTVEI GD
Sbjct: 274 VCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDA 333
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+LEE L ++T E L G+N YKCDRC Y KA K+L+I APNILTIALKRFQ
Sbjct: 334 VSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ 387
|
|
| DICTYBASE|DDB_G0274827 DDB_G0274827 "putative ubiquitin carboxyl-terminal hydrolase (UCH)" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 467 (169.5 bits), Expect = 8.0e-42, P = 8.0e-42
Identities = 113/329 (34%), Positives = 172/329 (52%)
Query: 477 EKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWK 536
EK NI + S+ + P R +F + + Q++N + N L S K
Sbjct: 121 EKLNIKKKQVNSAISNEAKPLFH--RMIKFKEAEIQDDSNDQLKNKYKPI-NKLNDSASK 177
Query: 537 AVDQFRGSKS-SKQCLSVGCETAGRYSD------KGLFSYELFVKLYNWNKVELQPCGLI 589
+ +KS +K+ G E + K LFS + KL W V+ GL
Sbjct: 178 KLADLAKAKSEAKKKEKEGGEEEEDDDNILAKPKKVLFSVDQLSKLMEWKSVQRIGSGLN 237
Query: 590 NCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRA-KDGKSPL 648
N GN+C+ N VLQCL +T PL + + HS++C +C C LE +L++ K G +
Sbjct: 238 NVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQASGFCIFCSLETQVLQSHKCGGKSI 297
Query: 649 SPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGL 708
+P I S ++ I GR+ED+HEF+R+ I+++Q V + + + + TT+IG
Sbjct: 298 TPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSLSKYPKGSINHRDAMTTVIGS 357
Query: 709 TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKC 768
FGGYLRS++KC++C +S + MDL V+I +L + L + +E+LDG NKYKC
Sbjct: 358 IFGGYLRSQVKCSQCQYESNTYDPFMDLCVDIN-QADSLTKGLTNFVKSELLDGSNKYKC 416
Query: 769 DRCKSYEKAKKKLTIVEAPNILTIALKRF 797
+CK KA+K+L I AP ILT +KRF
Sbjct: 417 SKCKKLVKAQKRLQIHIAPPILTCQIKRF 445
|
|
| POMBASE|SPCC1682.12c ubp16 "ubiquitin C-terminal hydrolase Ubp16" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 5.4e-40, P = 5.4e-40
Identities = 113/334 (33%), Positives = 168/334 (50%)
Query: 473 SLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRS--SAMSAQIENSPS-NVGNG 529
+++ +++ N + V PSVP +N ++S S S SP+ N +G
Sbjct: 14 AVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSFSAPTSPTRNKRSG 73
Query: 530 LKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKL-YNWNKVELQPCGL 588
+ +K RG ++ V + A + LF E KL W+ + GL
Sbjct: 74 SSSQEYKKSSGTRGDGAND---FVDEDPAFIPPARILFPEE---KLSMEWDNIMPNAPGL 127
Query: 589 INCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK--- 645
+N GN+C+ N VLQ + TPPL Y L G HS C + + C C +E + RA K
Sbjct: 128 VNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSC-RMNACVLCRMEQHVARAYPNKGTK 186
Query: 646 --SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
S P GI S L+ I S R+EDAHEF+RY +D Q C++ N P ET
Sbjct: 187 RASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHK-NLDHPSR-ET 244
Query: 704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGE 763
+++ FGGYLR +I C+ C S + ++DL+V+ +G +L ++L+ + E L +
Sbjct: 245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGS--SLADSLKHFVHAEKLTKQ 302
Query: 764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
NKY+C+ CK A K++TI APNILTI KRF
Sbjct: 303 NKYRCENCKQLVDASKQMTIYRAPNILTIHFKRF 336
|
|
| MGI|MGI:1924050 Usp42 "ubiquitin specific peptidase 42" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 9.0e-40, P = 9.0e-40
Identities = 89/225 (39%), Positives = 129/225 (57%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161
Query: 638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LTI+LKRF F+
Sbjct: 279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323
|
|
| RGD|1305231 Usp42 "ubiquitin specific peptidase 42" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 9.0e-40, P = 9.0e-40
Identities = 89/225 (39%), Positives = 129/225 (57%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161
Query: 638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LTI+LKRF F+
Sbjct: 279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323
|
|
| UNIPROTKB|Q9H9J4 USP42 "Ubiquitin carboxyl-terminal hydrolase 42" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 452 (164.2 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 88/225 (39%), Positives = 129/225 (57%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162
Query: 638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LT++LKRF F+
Sbjct: 280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324
|
|
| UNIPROTKB|E2RHU7 USP42 "Ubiquitin carboxyl-terminal hydrolase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 452 (164.2 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 88/225 (39%), Positives = 129/225 (57%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
W + GL N GN+C+AN LQCL +TPPL Y L HSK C + +C C ++
Sbjct: 103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162
Query: 638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
I +A + P+ +++ ++ I G +EDAHEFL+Y +D MQ C+ G N
Sbjct: 163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220
Query: 697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
TTL+ FGGYLRS++KC C G S+ + +D+T+EI+ ++ +AL ++
Sbjct: 221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279
Query: 757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
E LDGEN YKC +CK A K+ TI + N+LT++LKRF F+
Sbjct: 280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.19 | 0.766 |
| 3rd Layer | 3.4.19.12 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 807 | |||
| cd02661 | 304 | cd02661, Peptidase_C19E, A subfamily of Peptidase | 2e-83 | |
| pfam00443 | 313 | pfam00443, UCH, Ubiquitin carboxyl-terminal hydrol | 1e-42 | |
| cd02660 | 328 | cd02660, Peptidase_C19D, A subfamily of Peptidase | 3e-38 | |
| cd02659 | 334 | cd02659, peptidase_C19C, A subfamily of Peptidase | 3e-31 | |
| cd02663 | 300 | cd02663, Peptidase_C19G, A subfamily of Peptidase | 7e-29 | |
| cd02257 | 255 | cd02257, Peptidase_C19, Peptidase C19 contains ubi | 6e-28 | |
| cd02667 | 279 | cd02667, Peptidase_C19K, A subfamily of Peptidase | 3e-24 | |
| cd02664 | 327 | cd02664, Peptidase_C19H, A subfamily of Peptidase | 8e-24 | |
| cd02674 | 230 | cd02674, Peptidase_C19R, A subfamily of peptidase | 8e-22 | |
| COG5533 | 415 | COG5533, UBP5, Ubiquitin C-terminal hydrolase [Pos | 8e-19 | |
| cd02658 | 311 | cd02658, Peptidase_C19B, A subfamily of Peptidase | 1e-18 | |
| cd02671 | 332 | cd02671, Peptidase_C19O, A subfamily of Peptidase | 9e-18 | |
| cd02668 | 324 | cd02668, Peptidase_C19L, A subfamily of Peptidase | 3e-15 | |
| COG5077 | 1089 | COG5077, COG5077, Ubiquitin carboxyl-terminal hydr | 7e-13 | |
| pfam13423 | 296 | pfam13423, UCH_1, Ubiquitin carboxyl-terminal hydr | 2e-12 | |
| cd02662 | 240 | cd02662, Peptidase_C19F, A subfamily of Peptidase | 2e-12 | |
| COG5207 | 749 | COG5207, UBP14, Isopeptidase T [Posttranslational | 2e-12 | |
| pfam01753 | 39 | pfam01753, zf-MYND, MYND finger | 3e-10 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 1e-07 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 4e-05 | |
| cd02674 | 230 | cd02674, Peptidase_C19R, A subfamily of peptidase | 6e-05 | |
| cd02257 | 255 | cd02257, Peptidase_C19, Peptidase C19 contains ubi | 2e-04 | |
| cd02669 | 440 | cd02669, Peptidase_C19M, A subfamily of Peptidase | 0.004 |
| >gnl|CDD|239126 cd02661, Peptidase_C19E, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 2e-83
Identities = 105/218 (48%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG 644
GL N GN+C+ N VLQCL TPPL Y L HSK+C + +C C LE + RA
Sbjct: 1 GAGLQNLGNTCFLNSVLQCLTHTPPLANYLLSREHSKDCCNEGFCMMCALEAHVERALAS 60
Query: 645 KSPLSPIGILSR-LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG-VNASGPLEDE 702
P S I S L+ I GR+EDAHEFLRY +D MQ C++ + A P E
Sbjct: 61 SGPGSAPRIFSSNLKQISKHFRIGRQEDAHEFLRYLLDAMQKACLDRFKKLKAVDPSSQE 120
Query: 703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
TTL+ FGGYLRS++KC C S + +DL+++I+G +LE+AL ++T E LDG
Sbjct: 121 TTLVQQIFGGYLRSQVKCLNCKHVSNTYDPFLDLSLDIKGA-DSLEDALEQFTKPEQLDG 179
Query: 763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800
ENKYKC+RCK KA K+LTI APN+LTI LKRF F
Sbjct: 180 ENKYKCERCKKKVKASKQLTIHRAPNVLTIHLKRFSNF 217
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 304 |
| >gnl|CDD|215922 pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 73/222 (32%), Positives = 99/222 (44%), Gaps = 6/222 (2%)
Query: 584 QPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE-CAKKDWCFTCELENL---IL 639
P GL N GN+CY N VLQ L PPL Y LQ L +L +
Sbjct: 2 GPTGLANLGNTCYMNSVLQALFSIPPLRDYLLQNSSELINPLGSLNQLPRALADLFHALQ 61
Query: 640 RAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPL 699
+ +SP L L I Q ++DAHEFL + +D + S
Sbjct: 62 SPNSKNASVSPKNFLQALGKISPQFSGYMQQDAHEFLLFLLDQLHEDL-NSLKKRKSHAA 120
Query: 700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
E+E+ + L F G L S++KC KC +S E DL++ IE L+ + E
Sbjct: 121 ENESLITKL-FQGQLESRLKCLKCKKESSTPEPFSDLSLPIEDSSSVLKLLTGNFLKLEE 179
Query: 760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
L+ E KY C +C + A KKL I P +L I LKRF+ F+
Sbjct: 180 LEKEEKYYCPKCGGKQNAIKKLDISRLPPVLIIHLKRFEDFN 221
|
Length = 313 |
| >gnl|CDD|239125 cd02660, Peptidase_C19D, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 3e-38
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDW--CFTCELENLI--LRAK 642
GLIN G +C+ NV+LQ L P L YFL HS C C +C ++ +
Sbjct: 2 GLINLGATCFMNVILQALLHNPLLRNYFLSDRHSCTCLSCSPNSCLSCAMDEIFQEFYYS 61
Query: 643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
+SP PI +L L ++DAHEF ++ +D + + N +
Sbjct: 62 GDRSPYGPINLLYLSWKHSRNLAGYSQQDAHEFFQFLLDQLHTHYGG--DKNEANDESHC 119
Query: 703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG--------------NLE 748
+I TF G L+S + C +C G S + +DL+++I L
Sbjct: 120 NCIIHQTFSGSLQSSVTCQRCGGVSTTVDPFLDLSLDIPNKSTPSWALGESGVSGTPTLS 179
Query: 749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+ L R+T E L G+ YKC C S ++A K+L+I + P +L LKRF+
Sbjct: 180 DCLDRFTRPEKL-GDFAYKCSGCGSTQEATKQLSIKKLPPVLCFQLKRFE 228
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 328 |
| >gnl|CDD|239124 cd02659, peptidase_C19C, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 3e-31
Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 17/216 (7%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELENLILRAKD 643
GL N G +CY N +LQ L TP + K L+ L L +
Sbjct: 3 VGLKNQGATCYMNSLLQQLYMTPEFRNAVYSIPPTEDDDDNKSV---PLALQRLFLFLQL 59
Query: 644 GKSPLSPIGILSRLQSIGSQLGNGREE-DAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
+SP+ + + +S G N E+ D EF R D + EE E
Sbjct: 60 SESPVKTTELTDKTRSFGWDSLNTFEQHDVQEFFRVLFDKL-----EEKLKGT--GQEG- 111
Query: 703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
LI FGG L + I C +C +SER+E +DL V ++G NLEE+L Y E L+G
Sbjct: 112 --LIKNLFGGKLVNYIICKECPHESEREEYFLDLQVAVKG-KKNLEESLDAYVQGETLEG 168
Query: 763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
+NKY C++C A+K + + P +LT+ LKRF+
Sbjct: 169 DNKYFCEKCGKKVDAEKGVCFKKLPPVLTLQLKRFE 204
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 334 |
| >gnl|CDD|239128 cd02663, Peptidase_C19G, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 7e-29
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GL N GN+CY N VLQ L F LT L+ L F E K
Sbjct: 1 GLENFGNTCYCNSVLQALYFENLLTC--LKDL-----------FESISEQ-----KKRTG 42
Query: 647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG-------VNASGPL 699
+SP ++RL+ N +DAHEFL + ++ + + E +N +
Sbjct: 43 VISPKKFITRLKRENELFDNYMHQDAHEFLNFLLNEIAEILDAERKAEKANRKLNNNNNA 102
Query: 700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
E + T + F G L ++ +C C S R E +DL++++E + ++ LR+++ TE
Sbjct: 103 EPQPTWVHEIFQGILTNETRCLTCETVSSRDETFLDLSIDVEQNT-SITSCLRQFSATET 161
Query: 760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
L G NK+ CD C S ++A+K++ I + P IL + LKRF
Sbjct: 162 LCGRNKFYCDECCSLQEAEKRMKIKKLPKILALHLKRF 199
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 300 |
| >gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 6e-28
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 668 REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKS 727
++DAHEFL + +D + + + +LI FGG L S I C +C +S
Sbjct: 21 EQQDAHEFLLFLLDKLHEEL--KKSSKRTSDSSSLKSLIHDLFGGKLESTIVCLECGHES 78
Query: 728 ERQERMMDLTVEIEGDIG---NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIV 784
E + L++ + +LE+ L ++ EIL+G+N YKC++ K ++A K+L I
Sbjct: 79 VSTEPELFLSLPLPVKGLPQVSLEDCLEKFFKEEILEGDNCYKCEKKK-KQEATKRLKIK 137
Query: 785 EAPNILTIALKRFQ 798
+ P +L I LKRF
Sbjct: 138 KLPPVLIIHLKRFS 151
|
They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 255 |
| >gnl|CDD|239132 cd02667, Peptidase_C19K, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 57/215 (26%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GL N GN+C+ N V+Q L+ TP L +
Sbjct: 1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE------------------------------ 30
Query: 647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
+P + S++ Q +++D+HE LRY +D +++ I
Sbjct: 31 --TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLRTF-------------------I 69
Query: 707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN---LEEALRRYTGTEILDGE 763
FGG L S I C C S E +DL++ +I + +E L+++T EIL+G
Sbjct: 70 DSIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDEIKSECSIESCLKQFTEVEILEGN 129
Query: 764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
NK+ C+ C KAKK+ I + P +L I LKRFQ
Sbjct: 130 NKFACENCT---KAKKQYLISKLPPVLVIHLKRFQ 161
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 279 |
| >gnl|CDD|239129 cd02664, Peptidase_C19H, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 8e-24
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GLIN GN+CY N VLQ L L + + +L L ++
Sbjct: 1 GLINLGNTCYMNSVLQALFMAKDFRRQVLSLNLPRLGDSQSVMKKLQLLQAHLMHTQRRA 60
Query: 647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
P L S G ++D E+LRY +D + TLI
Sbjct: 61 EAPPDYFLE--ASRPPWFTPGSQQDCSEYLRYLLDRLH-------------------TLI 99
Query: 707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
FGG L + I+C C+ S R ER DL + ++++ L + E L G+N+Y
Sbjct: 100 EKMFGGKLSTTIRCLNCNSTSARTERFRDLDLSFP----SVQDLLNYFLSPEKLTGDNQY 155
Query: 767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
C++C S + A+K++ + AP L + L RF
Sbjct: 156 YCEKCASLQDAEKEMKVTGAPEYLILTLLRFS 187
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 327 |
| >gnl|CDD|239139 cd02674, Peptidase_C19R, A subfamily of peptidase C19 | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 8e-22
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 668 REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKS 727
++DA EFL + +D + S +I F G L+S++ C C S
Sbjct: 21 DQQDAQEFLLFLLDGLHS-------------------IIVDLFQGQLKSRLTCLTCGKTS 61
Query: 728 ERQERMMDLTVEI--EGDIGN---LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLT 782
E L++ I LE+ LR +T E LDG+N +KC +CK KA KKLT
Sbjct: 62 TTFEPFTYLSLPIPSGSGDAPKVTLEDCLRLFTKEETLDGDNAWKCPKCKKKRKATKKLT 121
Query: 783 IVEAPNILTIALKRFQ 798
I P +L I LKRF
Sbjct: 122 ISRLPKVLIIHLKRFS 137
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 230 |
| >gnl|CDD|227820 COG5533, UBP5, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 89.3 bits (221), Expect = 8e-19
Identities = 61/267 (22%), Positives = 99/267 (37%), Gaps = 53/267 (19%)
Query: 583 LQPCGLINCGNSCYANVVLQCLAFTPPLTAYFL-------------QGLHSKECAKKDWC 629
L P GL N GN+CY N LQCL L +G K+
Sbjct: 69 LPPNGLRNKGNTCYMNCALQCLLSIGDLNTMLQGRFYLQNINTDFPRGKPGSNAFKQ--- 125
Query: 630 FTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE 689
F E G +SP + L ++D+ EFL + +D + E
Sbjct: 126 FIALYETP---GCHGPKSISPRNFIDILSGRNKLFSGDMQQDSQEFLIFFLDLLH----E 178
Query: 690 EAGVNAS----GPLEDE-------------------------TTLIGLTFGGYLRSKIKC 720
+ N S L+DE +L+ TF G +S+++C
Sbjct: 179 DLNGNKSRSPILELKDEFEEVREELPLSHFSHHEWNLHLRSNKSLVAKTFFGQDKSRLQC 238
Query: 721 TKCHGKSERQERMMDLTVEI-EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKK 779
C+ S L V E L+E + R+ E L+G++ ++C +C E ++K
Sbjct: 239 EACNYTSTTIAMFSTLLVPPYEVVQLGLQECIDRFYEEEKLEGKDAWRCPKCGRKESSRK 298
Query: 780 KLTIVEAPNILTIALKRFQVFSPLPIS 806
++ I+ P++L I + RF +
Sbjct: 299 RMEILVLPDVLIIHISRFHISVMGRKK 325
|
Length = 415 |
| >gnl|CDD|239123 cd02658, Peptidase_C19B, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 1e-18
Identities = 54/244 (22%), Positives = 87/244 (35%), Gaps = 47/244 (19%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD--WCFTCELENLI------ 638
GL N GNSCY N VLQ L P + + D C+L L
Sbjct: 1 GLRNLGNSCYLNSVLQVLFSIPSFQWRYDDLENKFPSDVVDPANDLNCQLIKLADGLLSG 60
Query: 639 ----LRAKDGKSPLSPIGILSRL--QSIG---SQLGNGREEDAHEFLRYAIDTMQSVCIE 689
+ ++ +GI + IG + R++DA EFL + ID + +
Sbjct: 61 RYSKPASLKSENDPYQVGIKPSMFKALIGKGHPEFSTMRQQDALEFLLHLIDKLDRESFK 120
Query: 690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCH--GKSERQERMMDLTVEIEGDIGN- 746
G+N + + F + +++C C + ++ L V + +
Sbjct: 121 NLGLNPNDLFK---------FM--IEDRLECLSCKKVKYTSELSEILSLPVPKD-EATEK 168
Query: 747 -----------LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALK 795
LE+ L+ Y E ++ C CK A K P+ L I +K
Sbjct: 169 EEGELVYEPVPLEDCLKAYFAPETIE----DFCSTCKEKTTATKTTGFKTFPDYLVINMK 224
Query: 796 RFQV 799
RFQ+
Sbjct: 225 RFQL 228
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 311 |
| >gnl|CDD|239136 cd02671, Peptidase_C19O, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 9e-18
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 46/232 (19%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTA---YFLQGLHSKECAKKDWCFTCELENLILRAKD 643
GL N GN+CY N VLQ L F P + + + S E + + E N L +
Sbjct: 26 GLNNLGNTCYLNSVLQVLYFCPGFKHGLKHLVSLISSVEQLQSSFLLNPEKYNDELANQ- 84
Query: 644 GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
+P +L+ L+ + + DA E L+ + +Q + ++
Sbjct: 85 -----APRRLLNALREVNPMYEGYLQHDAQEVLQCILGNIQELVEKD------------- 126
Query: 704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD------------------IG 745
F G L + +C +C +ER+E D++V ++ +
Sbjct: 127 ------FQGQLVLRTRCLECETFTERREDFQDISVPVQESELSKSEESSEISPDPKTEMK 180
Query: 746 NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
L+ A+ ++ E + GE+KY C+ C Y +A++ L + P ++TI LK F
Sbjct: 181 TLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKLPEVITIHLKCF 232
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 332 |
| >gnl|CDD|239133 cd02668, Peptidase_C19L, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-15
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 42/235 (17%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GL N G +CY N LQ + T + E L+
Sbjct: 1 GLKNLGATCYVNSFLQLWFMNLEFRKAVY-----------ECNSTEDAE---LKNMPPDK 46
Query: 647 PLSPIGILSRLQSIGSQLGNGR-------------------EEDAHEFLRYAIDTMQSVC 687
P P I+ +LQ I +QL G ++DA EF + + +++
Sbjct: 47 PHEPQTIIDQLQLIFAQLQFGNRSVVDPSGFVKALGLDTGQQQDAQEFSKLFLSLLEAKL 106
Query: 688 IEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNL 747
+ + ++D F G +C+KC +S + +L ++++G L
Sbjct: 107 SKSKNPDLKNIVQDL-------FRGEYSYVTQCSKCGRESSLPSKFYELELQLKGHK-TL 158
Query: 748 EEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSP 802
EE + + E L G+N+Y C+ C S A +++ + P L L RF VF
Sbjct: 159 EECIDEFLKEEQLTGDNQYFCESCNSKTDATRRIRLTTLPPTLNFQLLRF-VFDR 212
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 324 |
| >gnl|CDD|227409 COG5077, COG5077, Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 7e-13
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 576 YNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD--WCFTCE 633
YN +K E GL N G +CY N +LQ L F A F + ++
Sbjct: 185 YN-SKKETGYVGLRNQGATCYMNSLLQSLFFI----AKFRKDVYGIPTDHPRGRDSVALA 239
Query: 634 LENLILRAKDGKSPLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIEEAG 692
L+ L + G+ P+ +S G + + D EF R D ++
Sbjct: 240 LQRLFYNLQTGEEPVD---TTELTRSFGWDSDDSFMQHDIQEFNRVLQDNLEK------- 289
Query: 693 VNASG-PLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
+ G +E+ I F G ++S IKC + +S R E D+ + ++G + NL+E+
Sbjct: 290 -SMRGTVVENALNGI---FVGKMKSYIKCVNVNYESARVEDFWDIQLNVKG-MKNLQESF 344
Query: 752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
RRY E LDG+N+Y ++ + AKK + P +L + LKRF+
Sbjct: 345 RRYIQVETLDGDNRYNAEK-HGLQDAKKGVIFESLPPVLHLQLKRFEY 391
|
Length = 1089 |
| >gnl|CDD|222118 pfam13423, UCH_1, Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 18/219 (8%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE---NLILRAKD 643
GL N G +CY N +LQ + F PPL L HS +C K++ C CEL +++ ++
Sbjct: 2 GLENNGPNCYLNALLQLMFFIPPLFNAIL--RHSADCPKEN-CLLCELGFLFDMLDKSTG 58
Query: 644 GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA--SGPLED 701
+ +L I G ++D E R+ ++ + + + + +
Sbjct: 59 QNCQAT--NLLRTFSGIPEAAALGLQQDIQEANRFILEQLSL-PLLTLKPDIFHNRCTGE 115
Query: 702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTV---EIEGDIG-NLEEALRRYTGT 757
+ FG S I+C C +S ++E ++ L + I+ G L R
Sbjct: 116 SGDSLDSLFGTSFISSIRCDSCGNESVKEEPLLTLELPYPPIDKPQGRTFSNILERSLNR 175
Query: 758 EILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKR 796
E ++ + C+ C+ Y A + + P IL I LKR
Sbjct: 176 EKIN---RITCNSCRKYSLANSRKHVKSLPPILGICLKR 211
|
Length = 296 |
| >gnl|CDD|239127 cd02662, Peptidase_C19F, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 56/221 (25%), Positives = 77/221 (34%), Gaps = 85/221 (38%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GL+N GN+C+ N VLQ LA P L Y
Sbjct: 1 GLVNLGNTCFMNSVLQALASLPSLIEY--------------------------------- 27
Query: 647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
L+ Q +DAHE + ++T++ + P +
Sbjct: 28 ----------LEEFLEQ------QDAHELFQVLLETLEQLL--------KFPFD------ 57
Query: 707 GLTFGGYLRSKIKCTKCHGKSE-RQERMMDLTVEIEGDIG----NLEEALRRYTGTEILD 761
G L S+I C +C S+ R E L++ + LE L + TEI+D
Sbjct: 58 -----GLLASRIVCLQCGESSKVRYESFTMLSLPVPNQSSGSGTTLEHCLDDFLSTEIID 112
Query: 762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSP 802
YKCDRC + IV P IL I L R VF
Sbjct: 113 D---YKCDRC--------QTVIVRLPQILCIHLSRS-VFDG 141
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 240 |
| >gnl|CDD|227532 COG5207, UBP14, Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 2e-12
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 20/219 (9%)
Query: 586 CGLINCGNSCYANVVLQCLA--FTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKD 643
GLIN GNSCY + V+Q L LQ C C+L L+ + K+
Sbjct: 304 VGLINLGNSCYLSSVIQSLVGYAVSKEEFDLLQHFEICYMKNPLECLFCQLMKLLSKMKE 363
Query: 644 GKSPLSPIGI--LSRLQSIG---SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGP 698
GI L IG + G ++DAHEFL + ++ I + + P
Sbjct: 364 TPDNEYVNGISPLDFKMLIGQDHPEFGKFAQQDAHEFLLFLLEK-----IRKGERSYLIP 418
Query: 699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTE 758
T+L ++ C+ C S E M L + I + + + +R+
Sbjct: 419 --PITSLFEFEVE----RRLSCSGCMDVSYSYESM--LMICIFLEGNDEPQDIRKSVEAF 470
Query: 759 ILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
L ++ C+ CK +KA +K I P L + + R+
Sbjct: 471 FLPDTIEWSCENCKGKKKASRKPFIKSLPKYLILQVGRY 509
|
Length = 749 |
| >gnl|CDD|201954 pfam01753, zf-MYND, MYND finger | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 3e-10
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 75 CAVCFSPTTT--RCARCKAVRYCSGKCQIVHWRQGHKDEC 112
CAVC RC+RCK+V YCS +CQ W HK EC
Sbjct: 1 CAVCGKEALKLLRCSRCKSVYYCSKECQKADWPY-HKKEC 39
|
Length = 39 |
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 1e-07
Identities = 44/195 (22%), Positives = 70/195 (35%), Gaps = 44/195 (22%)
Query: 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQ-------------GLHSKECAKKDW 628
E CGL N GN+CY N LQCL T L YFL G+H
Sbjct: 262 EAGTCGLRNLGNTCYMNSALQCLMHTWELRDYFLSDEYEESINEENPLGMHGS------- 314
Query: 629 CFTCELENLILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM---- 683
+LI + DG +P G + S + ++D+ EF+ + +D +
Sbjct: 315 -VASAYADLIKQLYDGNLHAFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGLHEDL 373
Query: 684 ----QSVCIEEAGVNASGPL-----EDET---------TLIGLTFGGYLRSKIKCTKCHG 725
+ + ++ + E ++I F G +S + C C
Sbjct: 374 NRIIKKPYTSKPDLSPGDDVVVKKKAKECWWEHLKRNDSIITDLFQGMYKSTLTCPGCGS 433
Query: 726 KSERQERMMDLTVEI 740
S + MDLT+ +
Sbjct: 434 VSITFDPFMDLTLPL 448
|
Length = 823 |
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 4e-05
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L++ L ++ E L + + C CK + +A K++ + P IL I LKRF
Sbjct: 677 LQDCLNEFSKPEQLGLSDSWYCPGCKEFRQASKQMELWRLPMILIIHLKRFS 728
|
Length = 823 |
| >gnl|CDD|239139 cd02674, Peptidase_C19R, A subfamily of peptidase C19 | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 12/42 (28%)
Query: 587 GLINCGNSCYANVVLQCLA--------FTPPLTAYFLQGLHS 620
GL N GN+CY N +LQCL+ F + L GLHS
Sbjct: 1 GLRNLGNTCYMNSILQCLSADQQDAQEF----LLFLLDGLHS 38
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 230 |
| >gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 587 GLINCGNSCYANVVLQCLAF 606
GL N GN+CY N VLQ L
Sbjct: 1 GLNNLGNTCYLNSVLQALFS 20
|
They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 255 |
| >gnl|CDD|239134 cd02669, Peptidase_C19M, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 52/262 (19%), Positives = 84/262 (32%), Gaps = 88/262 (33%)
Query: 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
GL N N+ YANV++Q L+ P+ +FL L KD KS
Sbjct: 121 GLNNIKNNDYANVIIQALSHVKPIRNFFL------------------LYENYENIKDRKS 162
Query: 647 PL-SPIGILSR-----------------LQSIGSQLGN----GREEDAHEFLRYAIDTMQ 684
L + L R LQ++ + D EFL + ++T+
Sbjct: 163 ELVKRLSELIRKIWNPRNFKGHVSPHELLQAVSKVSKKKFSITEQSDPVEFLSWLLNTL- 221
Query: 685 SVCIEEAGVNASGPLEDETTLIGLTFGGYLR---SKIKCTKCHGKS-------ERQERM- 733
+ G +++I F G ++ KIK S R ++
Sbjct: 222 --HKDLGGSKKPN-----SSIIHDCFQGKVQIETQKIKPHAEEEGSKDKFFKDSRVKKTS 274
Query: 734 --------MDL------TVEIEGDIG---NLEEALRRYTGTEILDGENKYKCDRCKSYEK 776
+DL E +I L++ L++Y G +
Sbjct: 275 VSPFLLLTLDLPPPPLFKDGNEENIIPQVPLKQLLKKYDGKT------------ETELKD 322
Query: 777 AKKKLTIVEAPNILTIALKRFQ 798
+ K+ I P L +KRF
Sbjct: 323 SLKRYLISRLPKYLIFHIKRFS 344
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. Length = 440 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| KOG0944 | 763 | consensus Ubiquitin-specific protease UBP14 [Postt | 100.0 | |
| KOG1865 | 545 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 100.0 | |
| cd02660 | 328 | Peptidase_C19D A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02663 | 300 | Peptidase_C19G A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02658 | 311 | Peptidase_C19B A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02671 | 332 | Peptidase_C19O A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02668 | 324 | Peptidase_C19L A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02669 | 440 | Peptidase_C19M A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02661 | 304 | Peptidase_C19E A subfamily of Peptidase C19. Pepti | 100.0 | |
| COG5207 | 749 | UBP14 Isopeptidase T [Posttranslational modificati | 100.0 | |
| cd02664 | 327 | Peptidase_C19H A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02657 | 305 | Peptidase_C19A A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02667 | 279 | Peptidase_C19K A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02659 | 334 | peptidase_C19C A subfamily of Peptidase C19. Pepti | 100.0 | |
| COG5533 | 415 | UBP5 Ubiquitin C-terminal hydrolase [Posttranslati | 100.0 | |
| COG5560 | 823 | UBP12 Ubiquitin C-terminal hydrolase [Posttranslat | 100.0 | |
| cd02662 | 240 | Peptidase_C19F A subfamily of Peptidase C19. Pepti | 99.97 | |
| KOG1868 | 653 | consensus Ubiquitin C-terminal hydrolase [Posttran | 99.96 | |
| cd02666 | 343 | Peptidase_C19J A subfamily of Peptidase C19. Pepti | 99.95 | |
| cd02674 | 230 | Peptidase_C19R A subfamily of peptidase C19. Pepti | 99.95 | |
| cd02673 | 245 | Peptidase_C19Q A subfamily of Peptidase C19. Pepti | 99.94 | |
| KOG1866 | 944 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 99.94 | |
| COG5077 | 1089 | Ubiquitin carboxyl-terminal hydrolase [Posttransla | 99.93 | |
| KOG1863 | 1093 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 99.92 | |
| PF00443 | 269 | UCH: Ubiquitin carboxyl-terminal hydrolase; InterP | 99.91 | |
| KOG1867 | 492 | consensus Ubiquitin-specific protease [Posttransla | 99.9 | |
| cd02257 | 255 | Peptidase_C19 Peptidase C19 contains ubiquitinyl h | 99.9 | |
| cd02665 | 228 | Peptidase_C19I A subfamily of Peptidase C19. Pepti | 99.89 | |
| KOG1873 | 877 | consensus Ubiquitin-specific protease [Posttransla | 99.87 | |
| KOG2026 | 442 | consensus Spindle pole body protein - Sad1p [Cytos | 99.87 | |
| PF13423 | 295 | UCH_1: Ubiquitin carboxyl-terminal hydrolase | 99.85 | |
| KOG1870 | 842 | consensus Ubiquitin C-terminal hydrolase [Posttran | 99.85 | |
| KOG4598 | 1203 | consensus Putative ubiquitin-specific protease [Po | 99.85 | |
| cd02672 | 268 | Peptidase_C19P A subfamily of Peptidase C19. Pepti | 99.82 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 99.78 | |
| KOG1871 | 420 | consensus Ubiquitin-specific protease [Posttransla | 99.67 | |
| KOG1872 | 473 | consensus Ubiquitin-specific protease [Posttransla | 99.5 | |
| cd02670 | 241 | Peptidase_C19N A subfamily of Peptidase C19. Pepti | 99.35 | |
| PF01753 | 37 | zf-MYND: MYND finger; InterPro: IPR002893 Zinc fin | 98.85 | |
| KOG1275 | 1118 | consensus PAB-dependent poly(A) ribonuclease, subu | 98.53 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 98.45 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 97.58 | |
| KOG3612 | 588 | consensus PHD Zn-finger protein [General function | 97.42 | |
| KOG2061 | 362 | consensus Uncharacterized MYND Zn-finger protein [ | 93.13 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 92.32 | |
| PF15499 | 275 | Peptidase_C98: Ubiquitin-specific peptidase-like, | 87.67 | |
| PF13824 | 55 | zf-Mss51: Zinc-finger of mitochondrial splicing su | 83.95 | |
| PF04438 | 30 | zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc | 80.53 |
| >KOG0944 consensus Ubiquitin-specific protease UBP14 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-52 Score=466.13 Aligned_cols=289 Identities=19% Similarity=0.279 Sum_probs=257.4
Q ss_pred cCCCccccccccccCCcccCccceeeccccCCCCCCCccchhhHhhhcccCCchhhhhhhcCccccCccc-CCccccHHH
Q 003615 493 VGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYS-DKGLFSYEL 571 (807)
Q Consensus 493 ~~~h~~~~~~~~~~~~~~~s~a~l~~Ite~~~~G~~dly~~vle~~d~v~dp~l~khL~~~Gi~I~~~~k-eksL~~~E~ 571 (807)
||+|+++||++++ +|+ +++|++|+ ++| .|+|.|. ++++++||+|.+||.||||++..+.+ +|++.+++.
T Consensus 212 gNgHA~~HYr~tg---hPL-aVKLgsIs---~dg-~DvycY~--cDd~v~dPnl~~hl~hfGId~~~m~kteksl~elel 281 (763)
T KOG0944|consen 212 GNGHALSHYRETG---HPL-AVKLGSIS---PDG-ADVYCYD--CDDEVRDPNLESHLSHFGIDMAKMDKTEKSLVELEL 281 (763)
T ss_pred CCcchHHhhhhcC---Cce-EEEecccC---CCc-cceeeec--ccccccCccHHHHHHhcCccHHHhccchhHHHHHHH
Confidence 6899999999999 999 89999998 899 9999987 78999999999999999999999999 999998865
Q ss_pred Hh-hhcccCCcc-----------ccccccccCCCccchHHHHHHHhcChhHHHHHhhccc--ccccccccchHHHHHHHH
Q 003615 572 FV-KLYNWNKVE-----------LQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH--SKECAKKDWCFTCELENL 637 (807)
Q Consensus 572 ~~-kl~~~~~~~-----------lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~--~~~~~~~~~~~l~qL~kL 637 (807)
-. ++|+|...+ .|++||+|+||+||||||||+|+++|.|..+++...+ ...+.++..+|.|||.||
T Consensus 282 ~~N~i~Ew~~~~esg~~l~p~~gpgytGl~NlGNSCYlnSVmQ~Lf~i~~fq~~~~~~~~~f~~~~~~P~ndf~cQ~~Kl 361 (763)
T KOG0944|consen 282 DQNRIWEWEALEESGAPLEPLFGPGYTGLINLGNSCYLNSVMQSLFSIPSFQRRYLEQERIFNCYPKDPTNDFNCQLAKL 361 (763)
T ss_pred HhhcccCceeeccCCCccccccCCCccceeecCcchhHHHHHHHheecccHHHhhccccceeecCCCCcchhHHHHHHHH
Confidence 32 677776221 3679999999999999999999999999999887522 234458899999999999
Q ss_pred HHHHhCC-----------CCCCCHHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccccc
Q 003615 638 ILRAKDG-----------KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706 (807)
Q Consensus 638 f~~l~s~-----------~~~IsP~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI 706 (807)
...|.++ ++.|+|.+|+..+++.++.|++++||||+|||+|||+.|.+..... ...+
T Consensus 362 ~~gm~sgkys~p~~~~~~qngIsP~mFK~~igknHpeFst~~QQDA~EFllfLl~ki~~n~rs~------------~~np 429 (763)
T KOG0944|consen 362 LHGMLSGKYSKPLMDPSNQNGISPLMFKALIGKNHPEFSTNRQQDAQEFLLFLLEKIRENSRSS------------LPNP 429 (763)
T ss_pred HHHhhcCcccCccCCccccCCcCHHHHHHHHcCCCccccchhhhhHHHHHHHHHHHHhhccccc------------CCCH
Confidence 9999843 3689999999999999999999999999999999999998632111 1348
Q ss_pred ccccceEEEEEEEECCCCCceeeeeeceeEEeecCC-----CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEE
Q 003615 707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG-----DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKL 781 (807)
Q Consensus 707 ~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~-----~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~ 781 (807)
.++|.|.++.+++|..|++++++++..+.+.|+||. +.+++.+||+.||.| .+++ |+|+.||.+..|.|++
T Consensus 430 td~frF~ve~Rv~C~~c~kVrYs~~~~~~i~lpv~~~~~v~~~v~~~~cleaff~p-q~~d---f~s~ac~~K~~a~kt~ 505 (763)
T KOG0944|consen 430 TDLFRFEVEDRVSCLGCRKVRYSYESEYLIQLPVPMTNEVREKVPISACLEAFFEP-QVDD---FWSTACGEKKGATKTT 505 (763)
T ss_pred HHHHHhhhhhhhhhhccccccccchhheeeEeeccccccccccCCHHHHHHHhcCC-cchh---hhhHhhcCcccccccc
Confidence 999999999999999999999999999999999985 347999999999999 5555 9999999999999999
Q ss_pred EeccccceeEEEEeeeeeCCCcccCC
Q 003615 782 TIVEAPNILTIALKRFQVFSPLPISF 807 (807)
Q Consensus 782 ~I~~lP~~LIIqLKRF~~~~wvP~k~ 807 (807)
+|++||+|||||++||.+.+|+|+|+
T Consensus 506 ~~ksfP~yLiiqv~rf~~~dw~pkKl 531 (763)
T KOG0944|consen 506 RFKSFPDYLIIQVGRFTLQDWVPKKL 531 (763)
T ss_pred ccccCCceEEEEeeEEEecCceeeee
Confidence 99999999999999999999999996
|
|
| >KOG1865 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-46 Score=415.24 Aligned_cols=232 Identities=47% Similarity=0.852 Sum_probs=217.6
Q ss_pred CCccccHHHHhhhcccCCccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHh
Q 003615 563 DKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAK 642 (807)
Q Consensus 563 eksL~~~E~~~kl~~~~~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~ 642 (807)
.+.|+|+|.+. +.|.+....++||.|+|||||+|||||||.++|||.+||+...|...|....+|++|+|+.++....
T Consensus 88 ~k~Lfp~e~~~--~~~~~~~~~~~GL~NlGNtCfaNsvlQcLt~T~PLv~yLls~~hs~~C~~~~~C~lc~~q~hi~~A~ 165 (545)
T KOG1865|consen 88 AKVLFPYEKLP--LSSDRPAAVGAGLQNLGNTCFANSVLQCLTYTPPLVNYLLSREHSRSCHRAKFCMLCTFQAHITRAL 165 (545)
T ss_pred chhccccceec--ccccccccCCcceecCCccHHHHHHHHHhcccHHHHHHHHHhhhhhhccccCeeeehHHHHHHHHHh
Confidence 47899998777 6888889999999999999999999999999999999999999999999999999999999997776
Q ss_pred CCC-CCCCHHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEEC
Q 003615 643 DGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCT 721 (807)
Q Consensus 643 s~~-~~IsP~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~ 721 (807)
... .+|+|..|+..|+.|...|+.|+|+||||||+++||.|+..|+ .+.....+..+++++|.++|||.++++|+|.
T Consensus 166 ~~~g~pisP~~i~s~L~~I~~~f~~grQEDAHEFLr~~vd~mqk~cL--~g~~~~~~~sq~ttlv~~iFGG~LrS~vkC~ 243 (545)
T KOG1865|consen 166 HNPGHPISPSQILSNLRNISAHFGRGRQEDAHEFLRFTVDAMQKACL--PGHKQVDPRSQDTTLVHQIFGGYLRSQIKCL 243 (545)
T ss_pred cCCCCccChHHHHHhhhhhcccccCCchhhHHHHHHHHHHHHHHhhc--CCCccCCcccccceehhhhhccchhhceecc
Confidence 555 4999999999999999999999999999999999999999987 3334455666889999999999999999999
Q ss_pred CCCCceeeeeeceeEEeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeee
Q 003615 722 KCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799 (807)
Q Consensus 722 ~C~~vS~~~E~f~~LsL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~ 799 (807)
.|++++.++|++++|+|+|. ...+|+++|+.|+++|.|+|+|+|+|++|++++.|.|++.|.++|+||+||||||++
T Consensus 244 ~C~~vS~tyE~~~dltvei~-d~~sl~~AL~qFt~~E~L~gen~Y~C~~Ck~~v~A~K~lti~raPnVLTi~LKRF~~ 320 (545)
T KOG1865|consen 244 HCKGVSDTYEPYLDLTLEIQ-DASSLQQALEQFTKPEKLDGENAYHCGRCKQKVPASKQLTIHRAPNVLTLHLKRFSN 320 (545)
T ss_pred cCCCcccccccccceEEEec-cchhHHHHHHHhhhHHhhCCccccccchhhhhCcccceeeeecCCceEEEeeehhcc
Confidence 99999999999999999999 679999999999999999999999999999999999999999999999999999997
|
|
| >cd02660 Peptidase_C19D A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=352.81 Aligned_cols=218 Identities=30% Similarity=0.543 Sum_probs=189.7
Q ss_pred cccccCCCccchHHHHHHHhcChhHHHHHhhccccc--ccccccchHHHHHHHHHHHHhC--CCCCCCHHHHHHHHHhhc
Q 003615 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK--ECAKKDWCFTCELENLILRAKD--GKSPLSPIGILSRLQSIG 661 (807)
Q Consensus 586 ~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~--~~~~~~~~~l~qL~kLf~~l~s--~~~~IsP~~fl~~L~k~~ 661 (807)
+||.|+|||||||||||+|+++|+||++++...+.. ....+..|+.++|++||..++. ....+.|..|+..++...
T Consensus 1 rGl~N~gntCY~NsvLQ~L~~~~~f~~~ll~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~ 80 (328)
T cd02660 1 RGLINLGATCFMNVILQALLHNPLLRNYFLSDRHSCTCLSCSPNSCLSCAMDEIFQEFYYSGDRSPYGPINLLYLSWKHS 80 (328)
T ss_pred CCccccCcchHHHHHHHHHhcCHHHHHHHhcCccccccccCCccccHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhc
Confidence 699999999999999999999999999999865543 1225677999999999999953 346889999999999888
Q ss_pred ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecC
Q 003615 662 SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741 (807)
Q Consensus 662 ~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip 741 (807)
+.|..+.||||+|||.+|||.|++++...... ........++|.++|+|++.++++|..|++++.+.|+|++|+|+|+
T Consensus 81 ~~f~~~~QqDa~Efl~~ll~~l~~~~~~~~~~--~~~~~~~~~~i~~~F~g~~~~~~~C~~C~~~s~~~e~f~~lsl~i~ 158 (328)
T cd02660 81 RNLAGYSQQDAHEFFQFLLDQLHTHYGGDKNE--ANDESHCNCIIHQTFSGSLQSSVTCQRCGGVSTTVDPFLDLSLDIP 158 (328)
T ss_pred hhhcccccccHHHHHHHHHHHHHHHhhccccc--ccccccCCceeEEecccEEEeeeEcCCCCCccceecccceeeeecc
Confidence 89999999999999999999999977543221 1111234578999999999999999999999999999999999998
Q ss_pred CC--------------CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC-CcccC
Q 003615 742 GD--------------IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS-PLPIS 806 (807)
Q Consensus 742 ~~--------------~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~-wvP~k 806 (807)
.. ..+|++||+.|+.+|.+++.| |+|++|+.++.+.|+..|.++|+||+|||+||.++. |.+.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~sl~~~L~~~~~~e~~~~~~-~~C~~C~~~~~~~~~~~i~~lP~~Lii~lkRf~~~~~~~~~K 237 (328)
T cd02660 159 NKSTPSWALGESGVSGTPTLSDCLDRFTRPEKLGDFA-YKCSGCGSTQEATKQLSIKKLPPVLCFQLKRFEHSLNKTSRK 237 (328)
T ss_pred ccccccccccccCCCCCCCHHHHHHHhcCccccCCCC-ccCCCCCCccceEEEEEecCCCceeEEEEEeEEecCCCCCcC
Confidence 64 289999999999999999877 999999999999999999999999999999999976 76655
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02663 Peptidase_C19G A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=348.47 Aligned_cols=193 Identities=33% Similarity=0.582 Sum_probs=172.9
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCC---CCCCHHHHHHHHHhhccc
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK---SPLSPIGILSRLQSIGSQ 663 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~---~~IsP~~fl~~L~k~~~~ 663 (807)
||.|+|||||||||||+|++ .+++++|+.||..|+... ..++|..|+.+++...+.
T Consensus 1 Gl~NlGnTCY~NsvLQ~L~~---------------------~~l~~~L~~lf~~l~~~~~~~~~isP~~f~~~l~~~~~~ 59 (300)
T cd02663 1 GLENFGNTCYCNSVLQALYF---------------------ENLLTCLKDLFESISEQKKRTGVISPKKFITRLKRENEL 59 (300)
T ss_pred CccCCCcceehhHHHHHhhh---------------------HHHHHHHHHHHHHHHhCCCCCeeECHHHHHHHHHhhcCC
Confidence 99999999999999999987 468899999999998643 568999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHhhhcCCC-------CCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeE
Q 003615 664 LGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA-------SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDL 736 (807)
Q Consensus 664 F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~-------~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~L 736 (807)
|..++||||+|||++|||.|++++........ ........++|.++|+|+++++++|..|++++.+.|+|++|
T Consensus 60 f~~~~QqDA~EFl~~lLd~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~F~G~~~~~~~C~~C~~~s~~~e~f~~L 139 (300)
T cd02663 60 FDNYMHQDAHEFLNFLLNEIAEILDAERKAEKANRKLNNNNNAEPQPTWVHEIFQGILTNETRCLTCETVSSRDETFLDL 139 (300)
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCcCCCChhhhCceEEEeeEEeCCCCCCccccceeEEe
Confidence 99999999999999999999998765432111 11122456789999999999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC
Q 003615 737 TVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801 (807)
Q Consensus 737 sL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~ 801 (807)
+|+|++. .+|++||+.|+++|.++|+|+|+|++|++++.|.|+..|.++|+||+|||+||.++.
T Consensus 140 sl~i~~~-~sl~~~L~~~~~~E~l~~~~~~~C~~C~~~~~a~k~~~i~~lP~vLii~LkRF~~~~ 203 (300)
T cd02663 140 SIDVEQN-TSITSCLRQFSATETLCGRNKFYCDECCSLQEAEKRMKIKKLPKILALHLKRFKYDE 203 (300)
T ss_pred ccCCCCc-CCHHHHHHHhhcccccCCCCcEECCCCCCceeEEEEEEeccCCceeEEEEEeEEeec
Confidence 9999974 899999999999999999999999999999999999999999999999999999865
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02658 Peptidase_C19B A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=348.75 Aligned_cols=206 Identities=25% Similarity=0.331 Sum_probs=181.1
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhccccc--ccccccchHHHHHHHHHHHHhCC---------------CCCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK--ECAKKDWCFTCELENLILRAKDG---------------KSPLS 649 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~--~~~~~~~~~l~qL~kLf~~l~s~---------------~~~Is 649 (807)
||.|+|||||||||||+|+++|+||++|+...+.. ....+..+++++|++|+..|+.+ +.++.
T Consensus 1 GL~NlGNTCY~NsvLQ~L~~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~ 80 (311)
T cd02658 1 GLRNLGNSCYLNSVLQVLFSIPSFQWRYDDLENKFPSDVVDPANDLNCQLIKLADGLLSGRYSKPASLKSENDPYQVGIK 80 (311)
T ss_pred CcccCCcchHHHHHHHHHHCCHHHHHHHhhhccccCCCcCCccccHHHHHHHHHHHhcCCCcCCCccccccccccccccC
Confidence 99999999999999999999999999998633222 22356778999999999988753 34689
Q ss_pred HHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceee
Q 003615 650 PIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSER 729 (807)
Q Consensus 650 P~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~ 729 (807)
|..|+..++..++.|..++||||+|||++||+.|++++... ....+.++|+|.++++++|..|+.++.+
T Consensus 81 p~~~~~~l~~~~~~f~~~~QqDa~Efl~~ll~~l~~~~~~~-----------~~~~~~~~f~~~~~~~i~C~~C~~~s~~ 149 (311)
T cd02658 81 PSMFKALIGKGHPEFSTMRQQDALEFLLHLIDKLDRESFKN-----------LGLNPNDLFKFMIEDRLECLSCKKVKYT 149 (311)
T ss_pred cHHHHHHHhccChhhcccccccHHHHHHHHHHHHHHhhccc-----------ccCCchhheEEEeeEEEEcCCCCCEEEe
Confidence 99999999999999999999999999999999999876421 1234789999999999999999999999
Q ss_pred eeeceeEEeecCCC-------------CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEee
Q 003615 730 QERMMDLTVEIEGD-------------IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKR 796 (807)
Q Consensus 730 ~E~f~~LsL~Ip~~-------------~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKR 796 (807)
.|+|++|+|+++.. ..+|++||+.|+.+|.++ ++|++|++++.|.|+.+|.++|+||+|||+|
T Consensus 150 ~e~~~~lsL~l~~~~~~~~~~~~~~~~~~sl~~~L~~~~~~e~i~----~~C~~C~~~~~a~k~~~i~~lP~vLii~LkR 225 (311)
T cd02658 150 SELSEILSLPVPKDEATEKEEGELVYEPVPLEDCLKAYFAPETIE----DFCSTCKEKTTATKTTGFKTFPDYLVINMKR 225 (311)
T ss_pred ecceeEEeeecccccccccccccccCCCCCHHHHHHHHcCccccc----ccccCCCCcccEEEEEEeecCCceEEEEeEE
Confidence 99999999999853 249999999999999997 6899999999999999999999999999999
Q ss_pred eee-CCCcccCC
Q 003615 797 FQV-FSPLPISF 807 (807)
Q Consensus 797 F~~-~~wvP~k~ 807 (807)
|.+ .+|.|+|+
T Consensus 226 F~~~~~~~~~Ki 237 (311)
T cd02658 226 FQLLENWVPKKL 237 (311)
T ss_pred EEecCCCceEee
Confidence 999 68988774
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02671 Peptidase_C19O A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=351.06 Aligned_cols=196 Identities=28% Similarity=0.466 Sum_probs=168.4
Q ss_pred CccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHH---HHh-CCCCCCCHHHHHH
Q 003615 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLIL---RAK-DGKSPLSPIGILS 655 (807)
Q Consensus 580 ~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~---~l~-s~~~~IsP~~fl~ 655 (807)
+...+++||+|+|||||||||||+|+++|+||+.++...... ....+++.++. .++ .....+.|..|+.
T Consensus 19 ~~~~~~~GL~NlGnTCYmNSvLQ~L~~~p~fr~~l~~~~~~~-------~~~~~~q~~~~~l~~~~~~~~~~~~P~~~~~ 91 (332)
T cd02671 19 ENLLPFVGLNNLGNTCYLNSVLQVLYFCPGFKHGLKHLVSLI-------SSVEQLQSSFLLNPEKYNDELANQAPRRLLN 91 (332)
T ss_pred ccCCCCcceeccCceEeHHHHHHHHHcChHHHHHHHhhhccc-------CcHHHHHHHHHHHHHHHhhcccccCHHHHHH
Confidence 445688999999999999999999999999999986543111 11223333332 222 2234567999999
Q ss_pred HHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeecee
Q 003615 656 RLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMD 735 (807)
Q Consensus 656 ~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~ 735 (807)
.+++.++.|..+.||||+|||++|||.|+. ++.++|+|+++++++|..|++++.+.|+|++
T Consensus 92 ~l~~~~~~f~~~~QQDA~EFl~~LLd~L~~-------------------~i~~~F~g~~~~~~~C~~C~~~s~~~E~f~~ 152 (332)
T cd02671 92 ALREVNPMYEGYLQHDAQEVLQCILGNIQE-------------------LVEKDFQGQLVLRTRCLECETFTERREDFQD 152 (332)
T ss_pred HHHHhccccCCccccCHHHHHHHHHHHHHH-------------------HHHhhhceEEEEEEEeCCCCCeeceecccEE
Confidence 999999999999999999999999999984 3788999999999999999999999999999
Q ss_pred EEeecCCCC------------------CCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeee
Q 003615 736 LTVEIEGDI------------------GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797 (807)
Q Consensus 736 LsL~Ip~~~------------------~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF 797 (807)
|+|+|++.. .+|++||+.|+++|.++|+|+|+|++|++++.|.|+..|.++|+||+||||||
T Consensus 153 lsL~i~~~~~~~~~~~~~~~~~~~~~~~tL~~~L~~f~~~E~l~g~n~y~C~~C~~~~~a~k~~~~~~~P~vL~i~LkRF 232 (332)
T cd02671 153 ISVPVQESELSKSEESSEISPDPKTEMKTLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKLPEVITIHLKCF 232 (332)
T ss_pred EEEEeCCCcccccccccccccccccccCCHHHHHHHhCCcceecCCCCeeCCCCCCceeEEEEEEEecCCCEEEEEeeee
Confidence 999998642 58999999999999999999999999999999999999999999999999999
Q ss_pred eeCC
Q 003615 798 QVFS 801 (807)
Q Consensus 798 ~~~~ 801 (807)
.+++
T Consensus 233 ~~~~ 236 (332)
T cd02671 233 AANG 236 (332)
T ss_pred cccc
Confidence 9754
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02668 Peptidase_C19L A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=346.16 Aligned_cols=207 Identities=23% Similarity=0.431 Sum_probs=179.2
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhccccccc---------ccccchHHHHHHHHHHHHhCC-CCCCCHHHHHHH
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC---------AKKDWCFTCELENLILRAKDG-KSPLSPIGILSR 656 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~---------~~~~~~~l~qL~kLf~~l~s~-~~~IsP~~fl~~ 656 (807)
||.|+||||||||+||+|+++|+||++++........ .....+++++|++||..|+.+ ..+++|..|+..
T Consensus 1 GL~NlGnTCY~NsvLQ~L~~~~~fr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lf~~l~~~~~~~i~p~~f~~~ 80 (324)
T cd02668 1 GLKNLGATCYVNSFLQLWFMNLEFRKAVYECNSTEDAELKNMPPDKPHEPQTIIDQLQLIFAQLQFGNRSVVDPSGFVKA 80 (324)
T ss_pred CcccCCceeHHHHHHHHHHCCHHHHHHHHccCcccccccccccccCCcccchHHHHHHHHHHHHHhCCCceEChHHHHHH
Confidence 8999999999999999999999999999875432110 012368999999999999954 568999999988
Q ss_pred HHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeE
Q 003615 657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDL 736 (807)
Q Consensus 657 L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~L 736 (807)
++ |..++||||+|||.+|||.|++++..... ....+++.++|+|++.++++|..|+..+.+.|+|+.|
T Consensus 81 l~-----~~~~~QqDa~EFl~~lLd~L~~~l~~~~~-------~~~~~~i~~~F~G~~~~~~~C~~C~~~s~~~e~f~~l 148 (324)
T cd02668 81 LG-----LDTGQQQDAQEFSKLFLSLLEAKLSKSKN-------PDLKNIVQDLFRGEYSYVTQCSKCGRESSLPSKFYEL 148 (324)
T ss_pred hC-----CCCccccCHHHHHHHHHHHHHHHHhhccC-------CcccchhhhhcceEEEEEEEeCCCCCccccccccEEE
Confidence 83 67889999999999999999987653211 1235689999999999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC--CCcccC
Q 003615 737 TVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF--SPLPIS 806 (807)
Q Consensus 737 sL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~--~wvP~k 806 (807)
+|+|++. .+|++||+.|+.+|.++|+|+|+|++|++++.|.|+..|.++|+||+|||+||.++ .|.++|
T Consensus 149 ~l~i~~~-~sl~~~L~~~~~~e~l~g~~~~~C~~C~~~~~a~k~~~i~~lP~iLii~LkRf~~d~~~~~~~K 219 (324)
T cd02668 149 ELQLKGH-KTLEECIDEFLKEEQLTGDNQYFCESCNSKTDATRRIRLTTLPPTLNFQLLRFVFDRKTGAKKK 219 (324)
T ss_pred EEEeccc-CCHHHHHHHhhCceecCCCccccCCCCCceeeeEEEEEecCCCCeEEEEEEcceeecccCccee
Confidence 9999964 79999999999999999999999999999999999999999999999999999985 354544
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02669 Peptidase_C19M A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=360.75 Aligned_cols=272 Identities=17% Similarity=0.183 Sum_probs=210.7
Q ss_pred cCCCccccccccccCCcccCccceeeccccCCCCCCCccchhhHhhhcccCCchhhhhhhcCccccCcccCCccccHHHH
Q 003615 493 VGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELF 572 (807)
Q Consensus 493 ~~~h~~~~~~~~~~~~~~~s~a~l~~Ite~~~~G~~dly~~vle~~d~v~dp~l~khL~~~Gi~I~~~~keksL~~~E~~ 572 (807)
++.|+..|+++++ ++. ++.|++ .++|. ++++++|.||.|..++. ++ .++..++.+..++.+
T Consensus 43 ~~~ha~~H~~~~~---H~~-~v~l~t---------~~~yc--~~~~~~v~d~~l~~i~~--~~--~~~~~~~~i~~~~~~ 103 (440)
T cd02669 43 KGSHAYTHSLEDN---HHV-FLNLET---------LKFYC--LPDNYEIIDSSLDDIKY--VL--NPTYTKEQISDLDRD 103 (440)
T ss_pred CCcHHHHHhhccC---CCE-EEECCC---------CCEEE--eCCCCEEeCccHHHHHH--Hh--cCCCCHHHHHHhhhc
Confidence 4689999998877 554 333332 56777 55899999999988773 22 333445555555544
Q ss_pred hh---hcccCCccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCC---CC
Q 003615 573 VK---LYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG---KS 646 (807)
Q Consensus 573 ~k---l~~~~~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~---~~ 646 (807)
.+ .........|++||.|+|||||||||||+|+++|+||++|+...+.........++.++|..|+..+|+. +.
T Consensus 104 ~~~~~~~~~~~~~~G~vGL~NlGnTCYmNsvLQ~L~~~p~lr~~~l~~~~~~~~~~~~~~l~~~l~~l~~kl~~~~~~~~ 183 (440)
T cd02669 104 PKLSRDLDGKPYLPGFVGLNNIKNNDYANVIIQALSHVKPIRNFFLLYENYENIKDRKSELVKRLSELIRKIWNPRNFKG 183 (440)
T ss_pred cccccccCCCCccCCccCccCCCCchHHHHHHHHHHCCHHHHHHHhhccccccccCCCcHHHHHHHHHHHHHhccccCCC
Confidence 33 1222234458899999999999999999999999999999986553322234568999999999999965 47
Q ss_pred CCCHHHHHHHHHhhc-ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCC-
Q 003615 647 PLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCH- 724 (807)
Q Consensus 647 ~IsP~~fl~~L~k~~-~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~- 724 (807)
+++|.+|+..++... +.|..++||||+|||++|||.||+++... .....++|.++|+|++++.++|..|.
T Consensus 184 ~isP~~fl~~l~~~~~~~f~~~~QqDA~EFl~~LLd~L~~~l~~~--------~~~~~~ii~~~F~G~l~~~~~c~~~~~ 255 (440)
T cd02669 184 HVSPHELLQAVSKVSKKKFSITEQSDPVEFLSWLLNTLHKDLGGS--------KKPNSSIIHDCFQGKVQIETQKIKPHA 255 (440)
T ss_pred ccCHHHHHHHHHhhcccccCCcccCCHHHHHHHHHHHHHHHhccC--------CCCCCCcceeccCceEEEEEEeecccc
Confidence 899999999998754 57999999999999999999999876431 12456899999999999999987654
Q ss_pred --------------CceeeeeeceeEEeecCCCC-------------CCHHHHHHhhhcceeeCCCCceecCCCCceeeE
Q 003615 725 --------------GKSERQERMMDLTVEIEGDI-------------GNLEEALRRYTGTEILDGENKYKCDRCKSYEKA 777 (807)
Q Consensus 725 --------------~vS~~~E~f~~LsL~Ip~~~-------------~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A 777 (807)
..+.+.++|++|+|+||... .+|+++|+. |.|+.|.....+
T Consensus 256 ~~~~~~~~~~~c~~~~s~~~~pF~~LsLdip~~~~~~~~~~~~~l~~~~l~e~L~k------------y~~~~c~~~~~a 323 (440)
T cd02669 256 EEEGSKDKFFKDSRVKKTSVSPFLLLTLDLPPPPLFKDGNEENIIPQVPLKQLLKK------------YDGKTETELKDS 323 (440)
T ss_pred cccccccccccccccceeeeccceEEEecCCCCccccccccccccCcccHHHHHHh------------cCCccceecccc
Confidence 34667899999999998641 356666643 778888888899
Q ss_pred EEEEEeccccceeEEEEeeeeeCCCc
Q 003615 778 KKKLTIVEAPNILTIALKRFQVFSPL 803 (807)
Q Consensus 778 ~K~~~I~~lP~~LIIqLKRF~~~~wv 803 (807)
.|+++|.++|+||+||||||+++.+.
T Consensus 324 ~k~~~I~~LP~vLiihLKRF~~~~~~ 349 (440)
T cd02669 324 LKRYLISRLPKYLIFHIKRFSKNNFF 349 (440)
T ss_pred eEEEEEeeCCcEEEEEEecccCCCCc
Confidence 99999999999999999999987643
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02661 Peptidase_C19E A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=334.37 Aligned_cols=215 Identities=47% Similarity=0.832 Sum_probs=190.3
Q ss_pred ccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHhhccc
Q 003615 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAK-DGKSPLSPIGILSRLQSIGSQ 663 (807)
Q Consensus 585 p~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~-s~~~~IsP~~fl~~L~k~~~~ 663 (807)
|+||.|+|||||||||||+|+++|+||++++...+...+.....+++++|+.++..++ ..+..+.|..|...++...+.
T Consensus 1 ~~GL~N~gntCY~NsvLQ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~ 80 (304)
T cd02661 1 GAGLQNLGNTCFLNSVLQCLTHTPPLANYLLSREHSKDCCNEGFCMMCALEAHVERALASSGPGSAPRIFSSNLKQISKH 80 (304)
T ss_pred CCCccccCchhHHHHHHHHhhCCHHHHHHHhcchhhhhccCCcchHHHHHHHHHHHHHhCCCCccChHHHHHHHHHHHHh
Confidence 6899999999999999999999999999998765554444567799999999997776 567889999999999999999
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHhhhcCCC-CCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCC
Q 003615 664 LGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA-SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742 (807)
Q Consensus 664 F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~-~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~ 742 (807)
|..+.||||+|||.+|||.|++++........ ........+++.++|+|++.++++|..|+..+.+.|.|+.|+|+|++
T Consensus 81 f~~~~qqDa~Efl~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~F~g~~~~~~~C~~C~~~s~~~e~~~~l~l~i~~ 160 (304)
T cd02661 81 FRIGRQEDAHEFLRYLLDAMQKACLDRFKKLKAVDPSSQETTLVQQIFGGYLRSQVKCLNCKHVSNTYDPFLDLSLDIKG 160 (304)
T ss_pred hcCcchhhHHHHHHHHHHHHHHHHhhhcccccccCccccCCChhhhcCCcEEeeeEEeCCCCCCcCccccceeeeeecCC
Confidence 99999999999999999999987654432111 11223456789999999999999999999999999999999999997
Q ss_pred CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 743 DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 743 ~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
. .+|+++|+.|+.+|.++++++|+|++|++++.+.|+..|.++|+||+|||+||.+.
T Consensus 161 ~-~~l~~~l~~~~~~e~~~~~~~~~C~~C~~~~~~~~~~~i~~~P~iL~i~l~Rf~~~ 217 (304)
T cd02661 161 A-DSLEDALEQFTKPEQLDGENKYKCERCKKKVKASKQLTIHRAPNVLTIHLKRFSNF 217 (304)
T ss_pred C-CcHHHHHHHhcCceeeCCCCCeeCCCCCCccceEEEEEEecCCcEEEEEEeccccC
Confidence 5 79999999999999999999999999999999999999999999999999999986
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >COG5207 UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=346.84 Aligned_cols=288 Identities=19% Similarity=0.275 Sum_probs=242.8
Q ss_pred cCCCccccccccccCCcccCccceeeccccCCCCCCCccchhhHhhhccc-CC--chhhhhhhcCccccCccc-CCcccc
Q 003615 493 VGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFR-GS--KSSKQCLSVGCETAGRYS-DKGLFS 568 (807)
Q Consensus 493 ~~~h~~~~~~~~~~~~~~~s~a~l~~Ite~~~~G~~dly~~vle~~d~v~-dp--~l~khL~~~Gi~I~~~~k-eksL~~ 568 (807)
|++|+..||.++. +|+ +++|.+|. .|..|+|.|. |+++.+ ++ ++..|+..|||+|+...+ +|++..
T Consensus 205 GngHAlsHY~~t~---Hpl-avkl~Sls----~~~~diyCY~--CD~e~R~~~n~n~~s~~~~fGinIa~~~~~Eksl~~ 274 (749)
T COG5207 205 GNGHALSHYEETQ---HPL-AVKLPSLS----KEDCDIYCYL--CDSEIRSRYNSNENSVTIDFGINIADGKTEEKSLRK 274 (749)
T ss_pred CCcchhhhhhccC---Cce-EEEccccc----cccccEEEEe--cCcccccCCcccccceeeeeccchhhccchHHHHHH
Confidence 6799999999998 888 78888874 7889999988 667743 44 577889999999999988 899987
Q ss_pred HHHHhhhcccCC----------ccc---cccccccCCCccchHHHHHHHhcChhHHHHHhhccc--ccccccccchHHHH
Q 003615 569 YELFVKLYNWNK----------VEL---QPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH--SKECAKKDWCFTCE 633 (807)
Q Consensus 569 ~E~~~kl~~~~~----------~~l---gp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~--~~~~~~~~~~~l~q 633 (807)
+..-. ..+|+- .+. .++||+|+||+||+|||||.|+....+...+....+ .-.+..+..+|.||
T Consensus 275 lq~eq-n~nw~F~~~~~~~~sk~~~~ps~~~GliNlGNsCYl~SviqSlv~~~v~~~~~d~l~~~~~~~~~~P~~~l~CQ 353 (749)
T COG5207 275 LQSEQ-NANWEFLEKKRAPESKGESVPSPYVGLINLGNSCYLSSVIQSLVGYAVSKEEFDLLQHFEICYMKNPLECLFCQ 353 (749)
T ss_pred HHHhh-hcCcchhccccCchhhcccCCCCccceEecCCeeeHHHHHHHHhccccchhhhhhhccceeeeecCCchhHHHH
Confidence 73211 123431 111 259999999999999999999999988877755333 33456889999999
Q ss_pred HHHHHHHHhCC-----CCCCCHHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccccccc
Q 003615 634 LENLILRAKDG-----KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGL 708 (807)
Q Consensus 634 L~kLf~~l~s~-----~~~IsP~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~ 708 (807)
|-+|...|... .+.|.|.+|+..+++.++.|+..+||||+|||+|||+.|.+-... -..+.|.+
T Consensus 354 l~kll~~mk~~p~~~y~ngi~p~~fk~~igq~h~eFg~~~QQDA~EFLlfLL~kirk~~~S-----------~~~~~It~ 422 (749)
T COG5207 354 LMKLLSKMKETPDNEYVNGISPLDFKMLIGQDHPEFGKFAQQDAHEFLLFLLEKIRKGERS-----------YLIPPITS 422 (749)
T ss_pred HHHHHhhccCCCCccccCCcChhhHHHHHcCCchhhhhhhhhhHHHHHHHHHHHHhhccch-----------hcCCCcch
Confidence 99999998854 378999999999999999999999999999999999999852211 22345789
Q ss_pred ccceEEEEEEEECCCCCceeeeeeceeEEeecCC--CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccc
Q 003615 709 TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEA 786 (807)
Q Consensus 709 lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~--~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~l 786 (807)
+|.+.++.++.|..|+.+++.+++...+.+++.+ +.+++.++|+.||.+.+++ |.|++|+.+..|.++..|++|
T Consensus 423 lf~Fe~e~rlsC~~C~~v~ySye~~~~i~i~le~n~E~~di~~~v~a~f~pdtiE----~~CenCk~K~~a~~k~~~ksl 498 (749)
T COG5207 423 LFEFEVERRLSCSGCMDVSYSYESMLMICIFLEGNDEPQDIRKSVEAFFLPDTIE----WSCENCKGKKKASRKPFIKSL 498 (749)
T ss_pred hhhhhhcceecccccccccccccceEEEEeecccCcchhhHHHHHHheECcccee----eehhhhcCcccccccchhhcc
Confidence 9999999999999999999999999998888865 3589999999999999998 999999999999999999999
Q ss_pred cceeEEEEeeeeeCCCcccC
Q 003615 787 PNILTIALKRFQVFSPLPIS 806 (807)
Q Consensus 787 P~~LIIqLKRF~~~~wvP~k 806 (807)
|+|||||..||...+|.-.|
T Consensus 499 Pk~LIlq~~R~~lqny~v~k 518 (749)
T COG5207 499 PKYLILQVGRYSLQNYKVEK 518 (749)
T ss_pred CceeEEecceeeccceeehh
Confidence 99999999999999998655
|
|
| >cd02664 Peptidase_C19H A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=335.89 Aligned_cols=188 Identities=31% Similarity=0.547 Sum_probs=167.1
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhC-CCCCCCHHH-HHHHHHhhcccC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKD-GKSPLSPIG-ILSRLQSIGSQL 664 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s-~~~~IsP~~-fl~~L~k~~~~F 664 (807)
||.|+||||||||+||+|+++|+||++++....... ....+++++|+.||..|.. .+.++.|.. |+..++ .+.|
T Consensus 1 GL~NlGnTCY~NS~LQ~L~~~~~fr~~ll~~~~~~~--~~~~~~~~~L~~lf~~l~~~~~~~~~~~~~~l~~~~--~~~f 76 (327)
T cd02664 1 GLINLGNTCYMNSVLQALFMAKDFRRQVLSLNLPRL--GDSQSVMKKLQLLQAHLMHTQRRAEAPPDYFLEASR--PPWF 76 (327)
T ss_pred CCcCCcccHHHHHHHHHHHCcHHHHHHHHcCCcccc--CCcchHHHHHHHHHHHHhhcCCcccCCHHHHHHHhc--cccc
Confidence 899999999999999999999999999987654211 2345688899999987764 355667765 666653 5789
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCCCC
Q 003615 665 GNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744 (807)
Q Consensus 665 ~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~~ 744 (807)
..++||||||||.+||+.|+ ++|.++|+|++.++++|..|+.++.+.|+|+.|+|+||
T Consensus 77 ~~~~QqDa~EFl~~lLd~l~-------------------~~i~~~F~G~~~~~i~C~~C~~~s~~~e~f~~l~L~i~--- 134 (327)
T cd02664 77 TPGSQQDCSEYLRYLLDRLH-------------------TLIEKMFGGKLSTTIRCLNCNSTSARTERFRDLDLSFP--- 134 (327)
T ss_pred CCCCcCCHHHHHHHHHHHHH-------------------HHHHhhCcEEeEeEEEcCCCCCEecccccceeeecCCC---
Confidence 99999999999999999998 24889999999999999999999999999999999998
Q ss_pred CCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC
Q 003615 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801 (807)
Q Consensus 745 ~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~ 801 (807)
+|+++|+.|+.+|.++|+|+|+|++|++++.|.|+..|.++|+||+||||||.++.
T Consensus 135 -sl~~~l~~~~~~E~l~g~n~~~C~~C~~~~~a~k~~~i~~lP~vLii~LkRF~~~~ 190 (327)
T cd02664 135 -SVQDLLNYFLSPEKLTGDNQYYCEKCASLQDAEKEMKVTGAPEYLILTLLRFSYDQ 190 (327)
T ss_pred -CHHHHHHHhcCeeEccCCCceeCCccCCccceeEEEEcccCChhhEEEeeeeEEcc
Confidence 89999999999999999999999999999999999999999999999999999754
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02657 Peptidase_C19A A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=326.75 Aligned_cols=203 Identities=24% Similarity=0.303 Sum_probs=177.9
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccc-cccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE-CAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLG 665 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~-~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~ 665 (807)
||.|+|||||||||||+|+++|+||++++....... ......+++++|++||..|+.....++|..|+..+++..+.|.
T Consensus 1 Gl~N~GntCy~NsvLQ~L~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~i~p~~~~~~l~~~~~~f~ 80 (305)
T cd02657 1 GLTNLGNTCYLNSTLQCLRSVPELRDALKNYNPARRGANQSSDNLTNALRDLFDTMDKKQEPVPPIEFLQLLRMAFPQFA 80 (305)
T ss_pred CcccccchhHHHHHHHHHhCCHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHhCCCcCCcHHHHHHHHHHCcCcc
Confidence 899999999999999999999999999987654321 1235678999999999999988889999999999999888884
Q ss_pred ------CCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCC-CceeeeeeceeEEe
Q 003615 666 ------NGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCH-GKSERQERMMDLTV 738 (807)
Q Consensus 666 ------~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~-~vS~~~E~f~~LsL 738 (807)
.++||||+|||.+|||.|++++.. .....++|.++|+|++++.++|..|+ .++.+.|+|++|+|
T Consensus 81 ~~~~~~~~~QqDA~EFl~~lld~L~~~~~~---------~~~~~~~i~~~F~g~~~~~~~C~~C~~~~~~~~e~f~~Lsl 151 (305)
T cd02657 81 EKQNQGGYAQQDAEECWSQLLSVLSQKLPG---------AGSKGSFIDQLFGIELETKMKCTESPDEEEVSTESEYKLQC 151 (305)
T ss_pred cccCCCCccccCHHHHHHHHHHHHHHHhcc---------cCCCCcHHHHhhceEEEEEEEcCCCCCCCccccccceEEEe
Confidence 459999999999999999987533 12345679999999999999999999 79999999999999
Q ss_pred ecCCC--CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCCCc
Q 003615 739 EIEGD--IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803 (807)
Q Consensus 739 ~Ip~~--~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~wv 803 (807)
+|++. ..+|++||+.++.++.. ..|+.|+....+.|+.+|.++|+||+||||||.++.+.
T Consensus 152 ~i~~~~~~~~l~~~L~~~~~~~~~-----~~~~~~~~~~~~~k~~~i~~lP~vLii~LkRF~~~~~~ 213 (305)
T cd02657 152 HISITTEVNYLQDGLKKGLEEEIE-----KHSPTLGRDAIYTKTSRISRLPKYLTVQFVRFFWKRDI 213 (305)
T ss_pred ecCCCcccccHHHHHHHhhhhhhh-----hcCcccCCCceEEEEEEeccCCcEEEEEEECCcccccc
Confidence 99975 46899999999987654 57999999999999999999999999999999987654
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02667 Peptidase_C19K A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=322.19 Aligned_cols=166 Identities=36% Similarity=0.617 Sum_probs=153.4
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~ 666 (807)
||.|+|||||||||||+|+++|+||++++. +|..|+..++..++.|..
T Consensus 1 Gl~N~GntCy~NsvLQ~L~~~~~~~~~~l~--------------------------------~P~~~~~~l~~~~~~f~~ 48 (279)
T cd02667 1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE--------------------------------TPKELFSQVCRKAPQFKG 48 (279)
T ss_pred CCcCCCCchHHHHHHHHHhcCHHHHHHHHH--------------------------------CHHHHHHHHHHhhHhhcC
Confidence 999999999999999999999999999874 788899999988999999
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCC---C
Q 003615 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG---D 743 (807)
Q Consensus 667 ~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~---~ 743 (807)
++||||+|||++|||.|+ +++.++|+|+++++++|..|++++.+.|+|++|+|+++. .
T Consensus 49 ~~QqDA~Efl~~lld~l~-------------------~~i~~~F~G~~~~~i~C~~C~~~s~~~E~f~~L~Lp~~~~~~~ 109 (279)
T cd02667 49 YQQQDSHELLRYLLDGLR-------------------TFIDSIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDEIKS 109 (279)
T ss_pred CchhhHHHHHHHHHHHHH-------------------HhhhhhcceEEEEEEEcCCCCCEeCccccceEEecCCCcccCC
Confidence 999999999999999998 247899999999999999999999999999999999863 3
Q ss_pred CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC-CcccC
Q 003615 744 IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS-PLPIS 806 (807)
Q Consensus 744 ~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~-wvP~k 806 (807)
..+|++||+.|+.+|.++|+|+|.|++|++ |.|+..|.++|+||+||||||.++. |.+.|
T Consensus 110 ~~sL~~~L~~~~~~E~l~~~~~~~C~~C~~---a~k~~~i~~~P~~Lii~LkRF~~~~~~~~~K 170 (279)
T cd02667 110 ECSIESCLKQFTEVEILEGNNKFACENCTK---AKKQYLISKLPPVLVIHLKRFQQPRSANLRK 170 (279)
T ss_pred CCCHHHHHHhhcCeeEecCCCcccCCccCc---eeeEeEhhhCCCeEEEEEeccccCcccCcee
Confidence 479999999999999999999999999988 8999999999999999999999864 45544
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02659 peptidase_C19C A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=321.10 Aligned_cols=205 Identities=30% Similarity=0.434 Sum_probs=173.7
Q ss_pred cccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCC-CCCCHHHHHHHHHhhcc
Q 003615 584 QPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK-SPLSPIGILSRLQSIGS 662 (807)
Q Consensus 584 gp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~-~~IsP~~fl~~L~k~~~ 662 (807)
|++||.|+||||||||+||+|+++|+||++++....... .....++.++|+.||..|+... ..+.|..+.........
T Consensus 1 g~~GL~N~GntCY~NsvLQ~L~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (334)
T cd02659 1 GYVGLKNQGATCYMNSLLQQLYMTPEFRNAVYSIPPTED-DDDNKSVPLALQRLFLFLQLSESPVKTTELTDKTRSFGWD 79 (334)
T ss_pred CCCCcccCCcchHHHHHHHHHhcCHHHHHHHHcCCCccc-CcccccHHHHHHHHHHHHHhCCccccCcchhheeccCCCC
Confidence 679999999999999999999999999999987532211 1456779999999999998654 34455444322222235
Q ss_pred cCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCC
Q 003615 663 QLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742 (807)
Q Consensus 663 ~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~ 742 (807)
.|..+.||||+|||.+||+.|++++... ...+++.++|+|++...++|..|+..+...++|+.|+|++++
T Consensus 80 ~~~~~~QqDa~Efl~~ll~~l~~~~~~~----------~~~~~i~~lF~g~~~~~~~C~~C~~~s~~~e~f~~l~l~i~~ 149 (334)
T cd02659 80 SLNTFEQHDVQEFFRVLFDKLEEKLKGT----------GQEGLIKNLFGGKLVNYIICKECPHESEREEYFLDLQVAVKG 149 (334)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHhccC----------cccchhhhhCceEEEeEEEecCCCceecccccceEEEEEcCC
Confidence 6889999999999999999999875421 233579999999999999999999999999999999999986
Q ss_pred CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 743 DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 743 ~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
..+|+++|+.|+.+|.++|+|+|+|++|++++.+.|+..|.++|+||+|||+||.++
T Consensus 150 -~~~l~~~l~~~~~~e~l~~~~~~~C~~C~~~~~~~k~~~i~~lP~vLii~l~Rf~~~ 206 (334)
T cd02659 150 -KKNLEESLDAYVQGETLEGDNKYFCEKCGKKVDAEKGVCFKKLPPVLTLQLKRFEFD 206 (334)
T ss_pred -CCCHHHHHHHhcCeeEecCCccEecCcCCCcccEEEEEEeecCCCEEEEEeeeeEEc
Confidence 479999999999999999999999999999999999999999999999999999974
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >COG5533 UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=309.86 Aligned_cols=225 Identities=23% Similarity=0.360 Sum_probs=183.3
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhccc-----cccccc-ccchHHHHHHHHHHHHh-CCCCCCCHHHHH
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH-----SKECAK-KDWCFTCELENLILRAK-DGKSPLSPIGIL 654 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~-----~~~~~~-~~~~~l~qL~kLf~~l~-s~~~~IsP~~fl 654 (807)
...|.||+|+|||||||++||||+.+.++...|+...+ .+.... +......+|.-|...+. .+...|+|+.|+
T Consensus 68 n~~p~GL~N~GNtCymNc~lQCl~~~~dL~~M~~~~~ylq~INtd~prg~~g~~~~k~F~~l~~~~~~Hg~~sis~~nF~ 147 (415)
T COG5533 68 NLPPNGLRNKGNTCYMNCALQCLLSIGDLNTMLQGRFYLQNINTDFPRGKPGSNAFKQFIALYETPGCHGPKSISPRNFI 147 (415)
T ss_pred ccCCccccccCceehHHHHHHHHHhhhHHHHHhhhhhhhhhccCCCCCCCcchhHHHHHHHHHhccccCCCcccchHHHH
Confidence 34689999999999999999999999999995544322 222222 23345556666655444 456779999999
Q ss_pred HHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCC-------------------------CCCCCCCcccccccc
Q 003615 655 SRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN-------------------------ASGPLEDETTLIGLT 709 (807)
Q Consensus 655 ~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~-------------------------~~~~~~~~~siI~~l 709 (807)
..++.+++.|+..+|||+|||+.++||.||+++....... |...+..+.++|.+.
T Consensus 148 ~i~~~~n~~fs~dmQqD~qEFl~fflD~LHedln~N~Srs~i~~l~de~e~~Reel~l~~~S~~EWn~~L~sn~S~v~~~ 227 (415)
T COG5533 148 DILSGRNKLFSGDMQQDSQEFLIFFLDLLHEDLNGNKSRSPILELKDEFEEVREELPLSHFSHHEWNLHLRSNKSLVAKT 227 (415)
T ss_pred HHHccccccccccchhhHHHHHHHHHHHHHhhhcCCcccccccccchHHHHHHhhcCcchhhhhhhHHhhccchHHHHHH
Confidence 9999999999999999999999999999999765432211 111122456899999
Q ss_pred cceEEEEEEEECCCCCceeeeeeceeEEeecCCC-CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccc
Q 003615 710 FGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD-IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPN 788 (807)
Q Consensus 710 F~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~-~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~ 788 (807)
|.|+..++++|..|++.+.++.+|..|.+|++.- ...|+|||++|.++|.|+|+++|+|++|++++.++|++.|..+|+
T Consensus 228 f~gq~~srlqC~~C~~TStT~a~fs~l~vp~~~v~~~~l~eC~~~f~~~e~L~g~d~W~CpkC~~k~ss~K~~~I~~lP~ 307 (415)
T COG5533 228 FFGQDKSRLQCEACNYTSTTIAMFSTLLVPPYEVVQLGLQECIDRFYEEEKLEGKDAWRCPKCGRKESSRKRMEILVLPD 307 (415)
T ss_pred HhhhhhhhhhhhhcCCceeEEeccceeeeccchheeecHHHHHHHhhhHHhhcCcccccCchhcccccchheEEEEecCc
Confidence 9999999999999999999999999999999852 256999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeeeeCCCcccC
Q 003615 789 ILTIALKRFQVFSPLPIS 806 (807)
Q Consensus 789 ~LIIqLKRF~~~~wvP~k 806 (807)
||||||+||...--.|+|
T Consensus 308 ~LII~i~RF~i~V~~~~k 325 (415)
T COG5533 308 VLIIHISRFHISVMGRKK 325 (415)
T ss_pred eEEEEeeeeeEEeecccc
Confidence 999999999943333433
|
|
| >COG5560 UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=325.68 Aligned_cols=159 Identities=26% Similarity=0.445 Sum_probs=137.7
Q ss_pred ccccccccCCCccchHHHHHHHhcChhHHHHHhhccccccccc-----ccchHHHHHHHHHHHHhCC-CCCCCHHHHHHH
Q 003615 583 LQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK-----KDWCFTCELENLILRAKDG-KSPLSPIGILSR 656 (807)
Q Consensus 583 lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~-----~~~~~l~qL~kLf~~l~s~-~~~IsP~~fl~~ 656 (807)
.|.+||+|+||||||||.||||.|++.+|+||+...+....+. -...+..++..|+.+++.+ ..++.|.+|+..
T Consensus 263 ~GtcGL~NlGNTCyMNSaLQCL~ht~eLrdyFlsdeye~~iNe~Nplgmhg~vAsayadLik~ly~~~~haf~Ps~fK~t 342 (823)
T COG5560 263 AGTCGLRNLGNTCYMNSALQCLMHTWELRDYFLSDEYEESINEENPLGMHGSVASAYADLIKQLYDGNLHAFTPSGFKKT 342 (823)
T ss_pred ccccceecCCcceecchHHHHHhccHHHHHHhhhhhhHhhhcccCccchhhhHHHHHHHHHHHHhCccccccChHHHHHH
Confidence 5889999999999999999999999999999998777655542 2456788888998888865 478999999999
Q ss_pred HHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCC----------------------CCCcccccccccceEE
Q 003615 657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGP----------------------LEDETTLIGLTFGGYL 714 (807)
Q Consensus 657 L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~----------------------~~~~~siI~~lF~Gkl 714 (807)
++.++..|.+++|||.+||+-+|||.||+.+.+......... .+.+.++|.++|.|..
T Consensus 343 IG~fn~~fsGy~QQDSqEFiaflLDgLHEdLnRI~~KpytskPdL~~~d~~~vKk~a~ecW~~H~kRNdSiItdLFqgmy 422 (823)
T COG5560 343 IGSFNEEFSGYDQQDSQEFIAFLLDGLHEDLNRIIKKPYTSKPDLSPGDDVVVKKKAKECWWEHLKRNDSIITDLFQGMY 422 (823)
T ss_pred HhhhHHHhcCccchhHHHHHHHHHHHHHHHHHHhhcCcccCCCCCCCcchHHHHHHHHHHHHHHHhcCcccHHHHHHHHh
Confidence 999999999999999999999999999998875543322211 2357899999999999
Q ss_pred EEEEEECCCCCceeeeeeceeEEeecC
Q 003615 715 RSKIKCTKCHGKSERQERMMDLTVEIE 741 (807)
Q Consensus 715 ~s~I~C~~C~~vS~~~E~f~~LsL~Ip 741 (807)
++++.|..|+.++.+++||++|+||+|
T Consensus 423 KSTL~Cp~C~~vsitfDPfmdlTLPLP 449 (823)
T COG5560 423 KSTLTCPGCGSVSITFDPFMDLTLPLP 449 (823)
T ss_pred hceeeccCcCceeeeecchhhccccCc
Confidence 999999999999999999999999994
|
|
| >cd02662 Peptidase_C19F A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=279.37 Aligned_cols=141 Identities=38% Similarity=0.667 Sum_probs=128.3
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~ 666 (807)
||+|+||||||||+||+|+++|+||++++...
T Consensus 1 Gl~N~g~tCy~ns~lQ~L~~~~~f~~~~~~~~------------------------------------------------ 32 (240)
T cd02662 1 GLVNLGNTCFMNSVLQALASLPSLIEYLEEFL------------------------------------------------ 32 (240)
T ss_pred CCcCCCCccHHHHHHHHHHCCHHHHHHHHHHH------------------------------------------------
Confidence 89999999999999999999999999976411
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCcee-eeeeceeEEeecCCC--
Q 003615 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSE-RQERMMDLTVEIEGD-- 743 (807)
Q Consensus 667 ~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~-~~E~f~~LsL~Ip~~-- 743 (807)
.||||||||++||+.|+. .+.++|.|++.+.++|..|+.++. +.|+|++|+|+||..
T Consensus 33 -~QqDa~EFl~~ll~~l~~-------------------~i~~~F~g~~~~~i~C~~C~~~s~~~~e~f~~LsL~ip~~~~ 92 (240)
T cd02662 33 -EQQDAHELFQVLLETLEQ-------------------LLKFPFDGLLASRIVCLQCGESSKVRYESFTMLSLPVPNQSS 92 (240)
T ss_pred -hhcCHHHHHHHHHHHHHH-------------------hccCccccEEEEEEEeCCCCCccCcceeeeeeeEecccccCC
Confidence 899999999999999983 268899999999999999999966 599999999999975
Q ss_pred --CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC-CcccC
Q 003615 744 --IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS-PLPIS 806 (807)
Q Consensus 744 --~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~-wvP~k 806 (807)
..+|++||+.|+.+|.++| |.|++| +..|.++|+||+|||+||.++. |.++|
T Consensus 93 ~~~~sl~~~L~~~~~~E~l~~---~~C~~C--------~~~i~~lP~vLii~LkRF~~~~~~~~~K 147 (240)
T cd02662 93 GSGTTLEHCLDDFLSTEIIDD---YKCDRC--------QTVIVRLPQILCIHLSRSVFDGRGTSTK 147 (240)
T ss_pred CCCCCHHHHHHHhcCcccccC---cCCCCC--------eEEeecCCcEEEEEEEEEEEcCCCceee
Confidence 4799999999999999998 999999 5789999999999999999877 76665
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >KOG1868 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=294.28 Aligned_cols=224 Identities=31% Similarity=0.426 Sum_probs=186.8
Q ss_pred CccccccccccCCCccchHHHHHHHhcChhHHHHHhhccccccc----ccccchHHHHHHHHHHHHhC--CCCCCCHHHH
Q 003615 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC----AKKDWCFTCELENLILRAKD--GKSPLSPIGI 653 (807)
Q Consensus 580 ~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~----~~~~~~~l~qL~kLf~~l~s--~~~~IsP~~f 653 (807)
....+.+||.|+|||||||++||||+.++.||..++...+.... ......+..++.+++..++. +...+.|+.|
T Consensus 296 ~~~~~~~GL~NlGntC~mn~ilQCl~~t~~lr~~~L~~~~~~~i~~~~~~~~~~l~~~~~~~l~~~~~~~~~~s~~P~~f 375 (653)
T KOG1868|consen 296 TDVFGCPGLRNLGNTCFMNSILQCLFSTGELRDNFLSIKLPQFINLDLFFGAEELESACAKLLQKLWHGHGQFSVLPRRF 375 (653)
T ss_pred ccccCCceeccCCcchHHHHHHHHHhhccccchhhhhHHHHHHcccCCcccchhHHHHHHHhhhhhccCCCceecCcHHH
Confidence 44567899999999999999999999999999888875443222 23445677778888877774 4566889999
Q ss_pred HHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcC-------------------------CCCCCCCCccccccc
Q 003615 654 LSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGV-------------------------NASGPLEDETTLIGL 708 (807)
Q Consensus 654 l~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~-------------------------~~~~~~~~~~siI~~ 708 (807)
+..++++.+.|..+.|||++||+.++++.||+++...... .+..........|.+
T Consensus 376 ~~~~~~y~~~~~~~~Qqd~qEfl~~lld~Lhe~ln~~~~~~~~~p~~~~~~~~~~~~~~s~~s~~~w~~~~~~~d~~i~~ 455 (653)
T KOG1868|consen 376 IRVLKRYSPNFSGYSQQDAQEFLIFLLDRLHEELNENTRPLKLSPLMGSYLLSELELSDSKKSLAEWLRYLEEEDSKIGD 455 (653)
T ss_pred HHHHhhcccccccccccchHHHHHHHHHhhhHhhhccCCCCccCccccccccccccccccchhHHHHHhhccccchHHHH
Confidence 9999999999999999999999999999999988654220 000111122344899
Q ss_pred ccceEEEEEEEECCCCCceeeeeeceeEEeecCCC-----CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEE--EEE
Q 003615 709 TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD-----IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAK--KKL 781 (807)
Q Consensus 709 lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~-----~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~--K~~ 781 (807)
+|.|++.+.++|..|+..+.+++.|++|+|+||.. .++|++|+..|+..|.++++++|.|++|+.+.... |+.
T Consensus 456 lf~gQ~ks~Lkc~~cg~~s~t~~~f~~lslpIp~~~~~~~~~~L~~C~~~ft~~ekle~~~~w~Cp~c~~~~~~~~lK~~ 535 (653)
T KOG1868|consen 456 LFVGQLKSYLKCQACGYTSTTFETFTDLSLPIPKKGFAGGKVSLEDCLSLFTKEEKLEGDEAWLCPRCKHKESSKTLKKL 535 (653)
T ss_pred HHHHHHHhheehhhcCCcceeeecceeeEEecccccccccccchHhhhccccchhhcccccccCCccccCccccccccee
Confidence 99999999999999999999999999999999843 25699999999999999999999999999999885 999
Q ss_pred EeccccceeEEEEeeeeeCC-Cc
Q 003615 782 TIVEAPNILTIALKRFQVFS-PL 803 (807)
Q Consensus 782 ~I~~lP~~LIIqLKRF~~~~-wv 803 (807)
.|.+||++|||||+||..++ |.
T Consensus 536 ~i~~lp~iLiihL~Rf~~~~~~~ 558 (653)
T KOG1868|consen 536 TILRLPKILIIHLKRFSSDGNSF 558 (653)
T ss_pred eeecCCHHHHHHHHHhccCcccc
Confidence 99999999999999999874 54
|
|
| >cd02666 Peptidase_C19J A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-29 Score=272.39 Aligned_cols=180 Identities=23% Similarity=0.329 Sum_probs=147.9
Q ss_pred ccccccCCCccchHHHHHHHhcChhHHHHHhhcccccc----------------cc----cccchHHHHHHHHHHHHhCC
Q 003615 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE----------------CA----KKDWCFTCELENLILRAKDG 644 (807)
Q Consensus 585 p~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~----------------~~----~~~~~~l~qL~kLf~~l~s~ 644 (807)
|+||.|+||||||||+||+|+++|+||++++....... .. ....+|+.+|++||..|+..
T Consensus 1 PvGL~NlGNTCYmNSlLQ~L~~i~~lR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LF~~l~~s 80 (343)
T cd02666 1 PAGLDNIGNTCYLNSLLQYFFTIKPLRDLVLNFDESKAELASDYPTERRIGGREVSRSELQRSNQFVYELRSLFNDLIHS 80 (343)
T ss_pred CCCcccCCceeHHHHHHHHHHccHHHHHHHHcCCccccccccccccccccCccccchhhhhhHHHHHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999997542110 00 12347999999999999855
Q ss_pred C-CCCCHHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCC---CCCCCCcccccccccceEEEEEEEE
Q 003615 645 K-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA---SGPLEDETTLIGLTFGGYLRSKIKC 720 (807)
Q Consensus 645 ~-~~IsP~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~---~~~~~~~~siI~~lF~Gkl~s~I~C 720 (807)
. ..+.|..++..+.. .||||+||+..||+.|+..+........ ........++|.++|+|++.+.++|
T Consensus 81 ~~~~v~P~~~l~~l~~--------~QQDa~Ef~~~lld~Le~~lk~~~~~~~~~~~~~~~~~~~~I~~lF~G~~~~~i~c 152 (343)
T cd02666 81 NTRSVTPSKELAYLAL--------RQQDVTECIDNVLFQLEVALEPISNAFAGPDTEDDKEQSDLIKRLFSGKTKQQLVP 152 (343)
T ss_pred CCCccCcHHHHHhccc--------cccchHHHHHHHHHHHHHHhcCccccccCcccccccchhhhhhHhceeeEEEEEEe
Confidence 4 88999999987642 8999999999999999998754322100 0111245679999999999999999
Q ss_pred CCCC---CceeeeeeceeEEeecCC---------CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccc
Q 003615 721 TKCH---GKSERQERMMDLTVEIEG---------DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPN 788 (807)
Q Consensus 721 ~~C~---~vS~~~E~f~~LsL~Ip~---------~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~ 788 (807)
..|+ ..+.+.|+|++|+|+|+. ...+|.+||+.|+..|. |.+||+
T Consensus 153 ~~~~~~~~~s~~~E~F~~L~l~I~~~~~~~~~~~~~~~L~d~L~~~~~~e~-----------------------~~~~P~ 209 (343)
T cd02666 153 ESMGNQPSVRTKTERFLSLLVDVGKKGREIVVLLEPKDLYDALDRYFDYDS-----------------------LTKLPQ 209 (343)
T ss_pred cccCCCCCCccccceeEEEEEecCcccccccccCCCCCHHHHHHHhcChhh-----------------------hccCCH
Confidence 9997 788999999999999986 57899999999998775 899999
Q ss_pred eeEEEEe
Q 003615 789 ILTIALK 795 (807)
Q Consensus 789 ~LIIqLK 795 (807)
+|.||||
T Consensus 210 vl~~qlq 216 (343)
T cd02666 210 RSQVQAQ 216 (343)
T ss_pred HHHHHHh
Confidence 9999988
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02674 Peptidase_C19R A subfamily of peptidase C19 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=252.93 Aligned_cols=140 Identities=41% Similarity=0.685 Sum_probs=131.2
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~ 666 (807)
||.|.||+|||||+||+|++
T Consensus 1 gl~n~~~~cy~n~~~Q~l~~------------------------------------------------------------ 20 (230)
T cd02674 1 GLRNLGNTCYMNSILQCLSA------------------------------------------------------------ 20 (230)
T ss_pred CccccCcchhhhHHHHHHHH------------------------------------------------------------
Confidence 89999999999999999987
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCCC---
Q 003615 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD--- 743 (807)
Q Consensus 667 ~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~--- 743 (807)
.||||+||+++||+.|+ +++.++|+|++..+++|..|+..+.+.|+|+.|+|+||..
T Consensus 21 -~QqDa~Ef~~~ll~~l~-------------------~~i~~~F~~~~~~~~~C~~C~~~~~~~e~~~~l~l~ip~~~~~ 80 (230)
T cd02674 21 -DQQDAQEFLLFLLDGLH-------------------SIIVDLFQGQLKSRLTCLTCGKTSTTFEPFTYLSLPIPSGSGD 80 (230)
T ss_pred -hhhhHHHHHHHHHHHHh-------------------hhHHheeCCEEeCcEEcCCCcCCcceecceeEEEEecccccCC
Confidence 79999999999999998 2488999999999999999999999999999999999864
Q ss_pred --CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCCCcccC
Q 003615 744 --IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPLPIS 806 (807)
Q Consensus 744 --~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~wvP~k 806 (807)
..+|+++|+.|+.+|.++|.++|+|++|++++.+.++..|.++|+||+|||+||.++++...|
T Consensus 81 ~~~~sl~~~L~~~~~~e~~~~~~~~~C~~C~~~~~~~~~~~i~~lP~iLii~l~R~~~~~~~~~K 145 (230)
T cd02674 81 APKVTLEDCLRLFTKEETLDGDNAWKCPKCKKKRKATKKLTISRLPKVLIIHLKRFSFSRGSTRK 145 (230)
T ss_pred CCCCCHHHHHHHhcCccccCCCCceeCCCCCCccceEEEEEEecCChhhEeEhhheecCCCCccc
Confidence 369999999999999999999999999999999999999999999999999999998765544
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02673 Peptidase_C19Q A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=244.52 Aligned_cols=158 Identities=23% Similarity=0.348 Sum_probs=129.7
Q ss_pred cccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCCC
Q 003615 588 LINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG 667 (807)
Q Consensus 588 L~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~~ 667 (807)
|+|.||+||+||.+|+|.+ ++++++.|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~--------------------------------------------------i~~~~~~F~~~ 31 (245)
T cd02673 2 LVNTGNSCYFNSTMQALSS--------------------------------------------------IGKINTEFDND 31 (245)
T ss_pred ceecCCeeeehhHHHHHHH--------------------------------------------------HhhhhhhcCCC
Confidence 7899999999999999842 34567889999
Q ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCCC-CCC
Q 003615 668 REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD-IGN 746 (807)
Q Consensus 668 ~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~-~~S 746 (807)
+||||||||++|||.|++++..................+.++|+|++++.++|..|++++.+.|+|++|+|+|+.. ...
T Consensus 32 ~QQDAhEFL~~LLd~l~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~l~s~i~C~~C~~~s~~~e~~~~L~L~i~~~~~~~ 111 (245)
T cd02673 32 DQQDAHEFLLTLLEAIDDIMQVNRTNVPPSNIEIKRLNPLEAFKYTIESSYVCIGCSFEENVSDVGNFLDVSMIDNKLDI 111 (245)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhcccCCCCcccccccCHhHheeeEEEeEEEecCCCCeeeeccccceeccccccCCcch
Confidence 9999999999999999987654321110000001122356889999999999999999999999999999999864 467
Q ss_pred HHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 747 Led~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
+++++..|+..+.++ |+|++|+.+ .+.|+.+|.++|+||+||||||++.
T Consensus 112 le~l~~~~~~~~~~e----~~C~~C~~~-~a~k~~~i~~~P~vL~i~lkRf~~~ 160 (245)
T cd02673 112 DELLISNFKTWSPIE----KDCSSCKCE-SAISSERIMTFPECLSINLKRYKLR 160 (245)
T ss_pred HHHHHHHhhcccccC----ccCCCCCCc-cceeechhhhCChhhEEeeEeeeec
Confidence 889999998887775 899999985 7889999999999999999999864
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >KOG1866 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=271.82 Aligned_cols=215 Identities=27% Similarity=0.428 Sum_probs=184.2
Q ss_pred CccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccc-cc-cccchHHHHHHHHHHHHh-CCCCCCCHHHHHHH
Q 003615 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE-CA-KKDWCFTCELENLILRAK-DGKSPLSPIGILSR 656 (807)
Q Consensus 580 ~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~-~~-~~~~~~l~qL~kLf~~l~-s~~~~IsP~~fl~~ 656 (807)
+...+.+||+|-|+|||||+++|-|.++|.+|+-++...+... .. .....+++++|.+|..+. ++-.++-|..|...
T Consensus 90 Rpp~gfVGLKNagatcyMNav~QQlymIP~Lrh~ll~~~~~td~pd~s~~e~vl~~lQ~iF~hL~~s~lQyyVPeg~Wk~ 169 (944)
T KOG1866|consen 90 RPPEGFVGLKNAGATCYMNAVIQQLYMIPGLRHLLLAFVGTTDLPDMSGDEKVLRHLQVIFGHLAASQLQYYVPEGFWKQ 169 (944)
T ss_pred CCCcceeeecCCCchHHHhhhhhhhhhcccccchhhhhcccccchhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHH
Confidence 3445779999999999999999999999999998776544311 11 112238999999996665 66689999999999
Q ss_pred HHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeE
Q 003615 657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDL 736 (807)
Q Consensus 657 L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~L 736 (807)
++..+......+||||-|||..|||.+++.+++- +...++...|+|....+-.|..|-+.-...|.|+.|
T Consensus 170 Fr~~~~pln~reqhDA~eFf~sLld~~De~LKkl----------g~p~lf~n~f~G~ysdqKIC~~CpHRY~~eE~F~~l 239 (944)
T KOG1866|consen 170 FRLWGEPLNLREQHDALEFFNSLLDSLDEALKKL----------GHPQLFSNTFGGSYSDQKICQGCPHRYECEESFTTL 239 (944)
T ss_pred hhccCCccchHhhhhHHHHHHHHHHHHHHHHHHh----------CCcHHHHHHhcCccchhhhhccCCcccCccccceee
Confidence 9877777888899999999999999999876553 233568999999999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeee--CCCcccC
Q 003615 737 TVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPLPIS 806 (807)
Q Consensus 737 sL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~--~~wvP~k 806 (807)
+|+|.. .+|+++|++|.+.|.++|.|+|+|++|++|....||+.|++||.+|+||||||.| .+.--+|
T Consensus 240 ~l~i~~--~nLeesLeqfv~gevlEG~nAYhCeKCdeK~~TvkRt~ik~LPsvl~IqLkRF~yD~e~~~~iK 309 (944)
T KOG1866|consen 240 NLDIRH--QNLEESLEQFVKGEVLEGANAYHCEKCDEKVDTVKRTCIKKLPSVLAIQLKRFDYDWERECAIK 309 (944)
T ss_pred eeeccc--chHHHHHHHHHHHHHhcCcchhhhhhhhhhhHhHHHHHHhhCChhheehhhhccchhhhccccc
Confidence 999994 7999999999999999999999999999999999999999999999999999997 3333444
|
|
| >COG5077 Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-27 Score=266.88 Aligned_cols=205 Identities=26% Similarity=0.394 Sum_probs=179.4
Q ss_pred CccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHh
Q 003615 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQS 659 (807)
Q Consensus 580 ~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k 659 (807)
+.+.|++||+|.|+||||||.||.||.+..||+..+...... ......+..+||++|+.|+.++.+++..+|...++
T Consensus 188 KkeTGYVGlrNqGATCYmNSLlQslffi~~FRk~Vy~ipTd~--p~grdSValaLQr~Fynlq~~~~PvdTteltrsfg- 264 (1089)
T COG5077 188 KKETGYVGLRNQGATCYMNSLLQSLFFIAKFRKDVYGIPTDH--PRGRDSVALALQRLFYNLQTGEEPVDTTELTRSFG- 264 (1089)
T ss_pred ccceeeeeeccCCceeeHHHHHHHHHHHHHHHHHhhcCCCCC--CCccchHHHHHHHHHHHHhccCCCcchHHhhhhcC-
Confidence 457899999999999999999999999999999988644211 13455678899999999999999999999988875
Q ss_pred hcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEee
Q 003615 660 IGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVE 739 (807)
Q Consensus 660 ~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~ 739 (807)
+..+...+|+|.|||-+-|.|.|++..+.. .-...++.+|-|++.+.+.|.+-...+.+.|.||++.|+
T Consensus 265 -Wds~dsf~QHDiqEfnrVl~DnLEksmrgt----------~VEnaln~ifVgkmksyikCvnvnyEsarvedfwdiqlN 333 (1089)
T COG5077 265 -WDSDDSFMQHDIQEFNRVLQDNLEKSMRGT----------VVENALNGIFVGKMKSYIKCVNVNYESARVEDFWDIQLN 333 (1089)
T ss_pred -cccchHHHHHhHHHHHHHHHHHHHHhhcCC----------hhhhHHhHHHHHHhhceeeEEEechhhhhHHHHHHHHhc
Confidence 556777899999999999999999732211 112347899999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 740 IEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 740 Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
+.+. .+|+|.++.|.+.|+++|+|+|.|++-| .+.|.|..-|.+||+||-||||||+++
T Consensus 334 vK~~-knLqeSfr~yIqvE~l~GdN~Y~ae~~G-lqdAkKGViFeSlPpVlhlqLKRFeyD 392 (1089)
T COG5077 334 VKGM-KNLQESFRRYIQVETLDGDNRYNAEKHG-LQDAKKGVIFESLPPVLHLQLKRFEYD 392 (1089)
T ss_pred ccch-hhHHHHHHHhhhheeccCCccccccccc-chhhccceeeccCchHHHHHHHHhccc
Confidence 9974 7999999999999999999999999977 599999999999999999999999973
|
|
| >KOG1863 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-26 Score=280.76 Aligned_cols=217 Identities=26% Similarity=0.355 Sum_probs=185.6
Q ss_pred cccCCccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCC-CCCHHHHH
Q 003615 576 YNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS-PLSPIGIL 654 (807)
Q Consensus 576 ~~~~~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~-~IsP~~fl 654 (807)
|.+.+....++||.|+||||||||+||+||+++.||+.++.........++...++.+|++||+.|+..+. ++++..+.
T Consensus 161 ~d~k~~tg~~vGL~N~GaTCY~NsllQ~lf~~~~FR~~Vy~~~~~~~~~~~~~~v~~~lq~lF~~LQ~s~~k~Vdt~~~~ 240 (1093)
T KOG1863|consen 161 YDSKRLTGFPVGLKNLGATCYVNSLLQVLFLIPEFRRAVYSIPPFTGHEDPRRSIPLALQRLFYELQMSKRKYVDTSELT 240 (1093)
T ss_pred hhhhhcCCCCccccCCCceeeehHHHHHHHccHHHHHHHhcCCCCCCcccccchHHHHHHHHHHHHhhcCCCCcCchhhh
Confidence 45545444559999999999999999999999999999988653222335566699999999999997665 99999999
Q ss_pred HHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeece
Q 003615 655 SRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMM 734 (807)
Q Consensus 655 ~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~ 734 (807)
..++... ....+|||++||++.|+|.|++...... ....+.++|.|++.+.+.|..|...+.+.|.|+
T Consensus 241 ~~~~~~~--~~~~~QqDvqEf~~~l~d~LE~~~~~~~----------~~~~l~~lf~g~~~~~i~c~~~~~~s~r~e~f~ 308 (1093)
T KOG1863|consen 241 KSLGWDS--NDSFEQQDVQEFLTKLLDWLEDSMIDAK----------VENTLQDLFTGKMKSVIKCIDVDFESSRSESFL 308 (1093)
T ss_pred hhhhccc--ccHHhhhhHHHHHHHHHHHHHhhccchh----------hhhhhhhhhcCCcceEEEEEeeeeecccccccc
Confidence 9997543 4557999999999999999998543322 234689999999999999999999999999999
Q ss_pred eEEeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC--CCcccC
Q 003615 735 DLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF--SPLPIS 806 (807)
Q Consensus 735 ~LsL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~--~wvP~k 806 (807)
++.|++.+. .+|.++|..|+..|+++|+|+ +|..|...+.|.|...+.+||++|.|||+||.|+ ...++|
T Consensus 309 d~ql~~~g~-~nl~~sf~~y~~~E~l~gdn~-~~~~~~~~~~a~k~~~f~~lPpvl~~qL~Rf~~~~~~~~~~K 380 (1093)
T KOG1863|consen 309 DLQLNGKGV-KNLEDSLHLYFEAEILLGDNK-YDAECHGLQDAKKGVLFDSLPPVLFIQLMRFEYDFSTGQKIK 380 (1093)
T ss_pred Cccccccch-hhHHHHHHHhhhHHHhcCCcc-ccccccchhhhhcceeeccCCchhhhhhhheeeeccCCceee
Confidence 999999974 789999999999999999999 9999999999999999999999999999999985 344443
|
|
| >PF00443 UCH: Ubiquitin carboxyl-terminal hydrolase; InterPro: IPR001394 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=222.31 Aligned_cols=163 Identities=36% Similarity=0.573 Sum_probs=130.5
Q ss_pred ccccccCCCccchHHHHHHHhcChhHHHHHhhcc-----cccccccccchHHHHHHHHHHHHhCC---CCCCCHHHHHHH
Q 003615 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGL-----HSKECAKKDWCFTCELENLILRAKDG---KSPLSPIGILSR 656 (807)
Q Consensus 585 p~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~-----~~~~~~~~~~~~l~qL~kLf~~l~s~---~~~IsP~~fl~~ 656 (807)
|+||.|.||||||||+||+|+++|+|+++++... ..........+++++|++||..|+.. ...+.|..|+..
T Consensus 1 ~~Gl~N~gntCylNs~lQ~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~i~~~~~~~~ 80 (269)
T PF00443_consen 1 PVGLQNIGNTCYLNSVLQCLFHIPPFRNYLLSYNSEKENNESNPSKKIKEFLQQLQNLFRSLWSSNSSDSSISPSDFINA 80 (269)
T ss_dssp --EESBSSSTHHHHHHHHHHHTSHHHHHHHHTTCHHHHHHCSSTTSCTCHHHHHHHHHHHHHHSSCSSSSEEHCHHHHHH
T ss_pred CCCcEeCCCchHHhHHHHhhhhhhhhhhhhhhcccchhhccccccccccchhhhhhhhhhhhhhhcccccceeecccccc
Confidence 6899999999999999999999999999998651 11122244567999999999999965 678999999999
Q ss_pred HHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcC-CCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeecee
Q 003615 657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGV-NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMD 735 (807)
Q Consensus 657 L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~-~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~ 735 (807)
++...+.|..+.||||+|||..||+.|+++....... ..........+++.++|++++...++|..|+..
T Consensus 81 l~~~~~~~~~~~qqDa~E~l~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~c~~c~~~--------- 151 (269)
T PF00443_consen 81 LSSINPSFSNGEQQDAHEFLSFLLDWLDEEFNSSFKRKSWKNTNSSEDSLISDLFGGQFESSIKCSSCKNS--------- 151 (269)
T ss_dssp HHHHCGGGGSSSTEEHHHHHHHHHHHHHHHHTSCSSHHHHHHHHCCEESHHHHHH-EEEEEEEEETTTTCE---------
T ss_pred ccccccccccccccchhhhhcccccccchhhcccccccccccccccccccccccccccccccccccccccc---------
Confidence 9999999999999999999999999999876442110 000011245678899999999999999999977
Q ss_pred EEeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 736 LTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 736 LsL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
+..|.++|+||+|+|+||.++
T Consensus 152 --------------------------------------------~~~~~~~P~~L~i~l~R~~~~ 172 (269)
T PF00443_consen 152 --------------------------------------------QSSISSLPPILIIQLKRFEFD 172 (269)
T ss_dssp --------------------------------------------EEEEEEBBSEEEEEEE-EEEE
T ss_pred --------------------------------------------ccccccccceeeeccccceec
Confidence 568999999999999999653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C19 (ubiquitin-specific protease family, clan CA). Families within the CA clan are loosely termed papain-like as protein fold of the peptidase unit resembles that of papain, the type example for clan CA. Predicted active site residues for members of this family and family C1 occur in the same order in the sequence: N/Q, C, H. The type example is human ubiquitin-specific protease 14. Ubiquitin is highly conserved, commonly found conjugated to proteins in eukaryotic cells, where it may act as a marker for rapid degradation, or it may have a chaperone function in protein assembly []. The ubiquitin is released by cleavage from the bound protein by a protease []. A number of deubiquitinising proteases are known: all are activated by thiol compounds [, ], and inhibited by thiol-blocking agents and ubiquitin aldehyde [, ], and as such have the properties of cysteine proteases []. The deubiquitinsing proteases can be split into 2 size ranges (20-30 kDa, IPR001578 from INTERPRO, and 100-200 kDa) []: this family are the 100-200 kDa peptides which includes the Ubp1 ubiquitin peptidase from yeast. Only one conserved cysteine can be identified, along with two conserved histidines. The spacing between the cysteine and the second histidine is thought to be more representative of the cysteine/histidine spacing of a cysteine protease catalytic dyad [].; GO: 0004221 ubiquitin thiolesterase activity, 0006511 ubiquitin-dependent protein catabolic process; PDB: 2LBC_A 3MHH_A 3MHS_A 3M99_A 2Y6E_D 2VHF_A 2HD5_A 3NHE_A 2IBI_A 1NBF_B .... |
| >KOG1867 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-24 Score=243.40 Aligned_cols=219 Identities=33% Similarity=0.592 Sum_probs=191.2
Q ss_pred ccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccc-cchHHHHHHHHHHHHhCC--CCCCCHHHHHHHH
Q 003615 581 VELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKK-DWCFTCELENLILRAKDG--KSPLSPIGILSRL 657 (807)
Q Consensus 581 ~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~-~~~~l~qL~kLf~~l~s~--~~~IsP~~fl~~L 657 (807)
...+.+||+|+||||+||++||.|.+.+..+...+...+....... ..|+.+++.+++..+++. +.++.|..++..+
T Consensus 157 ~~~~l~g~~n~g~tcfmn~ilqsl~~~~~~~~~~l~~~h~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~~~sp~~~l~~~ 236 (492)
T KOG1867|consen 157 TALGLRGLRNLGSTCFMNVILQSLLHDPLSRSSFLSGIHSKEPSSSGSSCLVCDLDRLFQALYSGHNRTPYSPFELLNLV 236 (492)
T ss_pred eeecccccccccHHHHHHHHHHHhhccchhhccchhhhcccCCCCCCCcchhhhhhhhhhHhhcCCCCCCcChHHHHHHH
Confidence 4567899999999999999999999999999999988887555555 789999999999999965 5889999999999
Q ss_pred HhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCC-C-CCCCCCcccccccccceEEEEEEEECCCCCceeeeeecee
Q 003615 658 QSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN-A-SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMD 735 (807)
Q Consensus 658 ~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~-~-~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~ 735 (807)
++..+.+.+++|||||||+..+++.+|.+. +..+.. . ........+++...|.|.+...++|..|+..+..+++|++
T Consensus 237 ~k~~~~~~g~~Qqda~eF~~~~~~~~~~~~-~~~~k~~~~~~~~~~c~~iv~~~F~G~L~~~v~c~~c~~~S~~~dpf~d 315 (492)
T KOG1867|consen 237 WKHSPNLAGYEQQDAHEFLIALLDRLHREK-DDCGKSLIASQSNKQCPCIVHTIFSGTLQSDVTCQTCGSKSTTYDPFMD 315 (492)
T ss_pred HHhCcccccccccchHHHHHHhcccccccc-cccccccccccCCcccccccceeecceeccceeehhhcceeeeccCccc
Confidence 999999999999999999999999999876 111100 0 0011134688999999999999999999999999999999
Q ss_pred EEeecCCCC---------CCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 736 LTVEIEGDI---------GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 736 LsL~Ip~~~---------~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
|+|+||... ..+.+|+..|...|......++.|..|+.++.+.|+..|.++|.+|.+||+||++.
T Consensus 316 isL~i~~~~~~~~~~~~~~~~~~cl~~~~~~~~~~~~~~~~c~~c~~~~~~~kql~~~~lP~~l~~~lkRfe~~ 389 (492)
T KOG1867|consen 316 ISLDIPDQFTSSSVRSPELTLLDCLDRFTRSEQLGKDSKYKCSSCKSKQESTKQLTIRKLPAVLCLHLKRFEHS 389 (492)
T ss_pred eeeecchhccCcccccchhhhhhhhhhhhhhhhcCcccccccCCcccccccccccccccCCceeeeeecccccc
Confidence 999998532 56999999999999988888999999999999999999999999999999999874
|
|
| >cd02257 Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=211.73 Aligned_cols=154 Identities=34% Similarity=0.532 Sum_probs=132.7
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~ 666 (807)
||.|.||+||+||+||+|++
T Consensus 1 Gl~N~~n~Cy~ns~lq~l~~------------------------------------------------------------ 20 (255)
T cd02257 1 GLNNLGNTCYLNSVLQALFS------------------------------------------------------------ 20 (255)
T ss_pred CccccCcchHHhHHHHHHHH------------------------------------------------------------
Confidence 89999999999999999998
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCCC---
Q 003615 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD--- 743 (807)
Q Consensus 667 ~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~--- 743 (807)
.||||+|||..+|+.|+.++...... ........+.+.++|+|.+...++|..|+..+.....+..+.|++|..
T Consensus 21 -~q~Da~E~l~~ll~~l~~~~~~~~~~--~~~~~~~~~~i~~~F~~~~~~~~~c~~c~~~~~~~~~~~~l~l~~~~~~~~ 97 (255)
T cd02257 21 -EQQDAHEFLLFLLDKLHEELKKSSKR--TSDSSSLKSLIHDLFGGKLESTIVCLECGHESVSTEPELFLSLPLPVKGLP 97 (255)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhccc--ccccccCCchhhhhcccEEeeEEECCCCCCCccCcccceeEEeeccCCCCC
Confidence 79999999999999999877653221 111123456799999999999999999998888888888899888865
Q ss_pred CCCHHHHHHhhhcceeeCCCCceecCCCC--ceeeEEEEEEeccccceeEEEEeeeeeCC-CcccC
Q 003615 744 IGNLEEALRRYTGTEILDGENKYKCDRCK--SYEKAKKKLTIVEAPNILTIALKRFQVFS-PLPIS 806 (807)
Q Consensus 744 ~~SLed~L~~f~~~E~LdgdNky~CekC~--~k~~A~K~~~I~~lP~~LIIqLKRF~~~~-wvP~k 806 (807)
..+|+++|+.++.+|.+++ +.|..|+ +.+.+.++..|.++|+||+|+|+||.++. |..+|
T Consensus 98 ~~~l~~~l~~~~~~e~~~~---~~~~~c~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~k 160 (255)
T cd02257 98 QVSLEDCLEKFFKEEILEG---DNCYKCEKKKKQEATKRLKIKKLPPVLIIHLKRFSFNEDGTKEK 160 (255)
T ss_pred CCcHHHHHHHhhhhhccCC---CCcccCCCCcccceeEEEecccCCceeEEEeeceeecccccccc
Confidence 4899999999999999998 8899998 68889999999999999999999999876 55544
|
They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >cd02665 Peptidase_C19I A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=219.22 Aligned_cols=148 Identities=23% Similarity=0.259 Sum_probs=121.2
Q ss_pred ccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCCC
Q 003615 587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGN 666 (807)
Q Consensus 587 GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~~ 666 (807)
||.|.||||++|+|.|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------ 20 (228)
T cd02665 1 GLKNVGNTCWFSAVIQSLFS------------------------------------------------------------ 20 (228)
T ss_pred CccccCcchhHHHHHHHHHH------------------------------------------------------------
Confidence 89999999999999999975
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCCCCCC
Q 003615 667 GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN 746 (807)
Q Consensus 667 ~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~~~~S 746 (807)
.||||+||+..||+.|++.+...... ........++|.++|+|++.+++.| |+..+.+.|+|++|+|+|.+. .+
T Consensus 21 -~QQDa~Ef~~~Lld~Le~~l~~~~~~--~~~~~~~~~~i~~lF~G~~~~~~~~--~~~~s~~~E~F~~L~l~i~~~-~~ 94 (228)
T cd02665 21 -QQQDVSEFTHLLLDWLEDAFQAAAEA--ISPGEKSKNPMVQLFYGTFLTEGVL--EGKPFCNCETFGQYPLQVNGY-GN 94 (228)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcccccc--ccccccccchHhhceEEEEEEEEEE--CCCcccccCccEEEEEEECCC-CC
Confidence 59999999999999999977533210 0111245678999999999987777 778889999999999999875 89
Q ss_pred HHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCCCcccC
Q 003615 747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPLPIS 806 (807)
Q Consensus 747 Led~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~wvP~k 806 (807)
|++||+.|+.+|.+++++.++ ...+.|+..|.++|+||+||||||.++.....|
T Consensus 95 L~e~L~~~~~ee~l~~~~~~~------~~~~~~~~~i~~lP~vL~i~LkRF~~~~~~~~K 148 (228)
T cd02665 95 LHECLEAAMFEGEVELLPSDH------SVKSGQERWFTELPPVLTFELSRFEFNQGRPEK 148 (228)
T ss_pred HHHHHHHhhhhcccccccccc------hhhhhhhhhhhhCChhhEEEeEeeEEcCCccEE
Confidence 999999999999998854332 234667788999999999999999997644443
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >KOG1873 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-22 Score=230.43 Aligned_cols=158 Identities=28% Similarity=0.407 Sum_probs=118.9
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhccccccc-----------------ccccchHHHHHHHHHHHHhCC
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC-----------------AKKDWCFTCELENLILRAKDG 644 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~-----------------~~~~~~~l~qL~kLf~~l~s~ 644 (807)
....+||.|||||||+|||||+|..+|.+|+.|......... ..+...++.+|..|.......
T Consensus 202 ~~~VrGL~NLGNTCFFNavMQnL~qt~~L~d~l~e~~~Sgt~v~I~~~~~s~l~~L~~el~~~g~lt~al~~~~e~~e~~ 281 (877)
T KOG1873|consen 202 GYIVRGLTNLGNTCFFNAVMQNLAQTPALRDVLKEEKESGTSVKIRPPLDSSLSPLFSELSSPGPLTYALANLLEMSETT 281 (877)
T ss_pred cccccccccccchhhHHHHHHHHhhcHHHHHHHHhhccCCceeEecCccccchhhHHHhccCCcchhHHHHhhhhhhhcc
Confidence 345589999999999999999999999999999764332110 023445666666655555567
Q ss_pred CCCCCHHHHHHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcC-----------------------CCCCCCCC
Q 003615 645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGV-----------------------NASGPLED 701 (807)
Q Consensus 645 ~~~IsP~~fl~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~-----------------------~~~~~~~~ 701 (807)
.+.|.|+.|+..+...+|+|..+.||||||.|++|||.|..+..+.... .-.++...
T Consensus 282 ksv~~Pr~lF~~~C~k~pqF~g~~QhDsHELLR~LLD~l~~EE~~~~kk~Il~~fG~~t~~l~scle~~q~sKvYe~f~~ 361 (877)
T KOG1873|consen 282 KSVITPRTLFGQFCSKAPQFRGYDQHDSHELLRCLLDSLRSEESRRRKKNILSNFGGETSSLVSCLECGQKSKVYEPFKD 361 (877)
T ss_pred CCccCHHHHHHHHHHhCCcccccccccHHHHHHHHHHhhhHHHHHHHHHhHHHhhCccccchhhhhhccchhhccccccc
Confidence 8999999999999999999999999999999999999997643221110 00111223
Q ss_pred cccccccccceEEEEEEEECCCCCceeeeeeceeEEeec
Q 003615 702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740 (807)
Q Consensus 702 ~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~I 740 (807)
..-++-.+|.|-+.+.+.|..|. ++...+.|.+++|||
T Consensus 362 ~~~~vp~~~~~~~~s~~~~~~~~-vss~~~s~~~~t~pv 399 (877)
T KOG1873|consen 362 LSLPVPLSFNGPLTSQIECQACD-VSSVHESFLSETLPV 399 (877)
T ss_pred CCcccccccCCCcccchhhhccc-eeccchhhccccccc
Confidence 34455688999999999999998 777778888888777
|
|
| >KOG2026 consensus Spindle pole body protein - Sad1p [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=207.78 Aligned_cols=274 Identities=18% Similarity=0.188 Sum_probs=199.0
Q ss_pred cccCccceeeccccCCCC--CCC-ccchhhHhhhcccCCchhhhhhhcCccccCcccCCccccHHHHhhhcccCCccccc
Q 003615 509 VQRSSAMSAQIENSPSNV--GNG-LKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQP 585 (807)
Q Consensus 509 ~~~s~a~l~~Ite~~~~G--~~d-ly~~vle~~d~v~dp~l~khL~~~Gi~I~~~~keksL~~~E~~~kl~~~~~~~lgp 585 (807)
.++|.|+-+.|++.++.| ..+ +..++++..+++.||.+......+.-......-.+...-..+..+.+....+-.|.
T Consensus 55 ~~kS~A~~h~l~~ghhvf~nl~telkfyvlpe~~ei~d~s~~~ikhslkptftr~~cp~lD~~nr~~~raLd~~tYLpG~ 134 (442)
T KOG2026|consen 55 GEKSHAYTHSLEEGHHVFLNLSTELKFYVLPENYEIDDPSLGDIKHSLKPTFTKTDCPNLDKVNRKLSRALDGSTYLPGF 134 (442)
T ss_pred CccccchhccccccccceeccccceeEEecchhccccCchhhhhhccccceeehhhcccccccchhhhhhhcCCcceeee
Confidence 577889999999986555 344 57788887788888876654332221111111111111111233445555666788
Q ss_pred cccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCC---CCCCHHHHHHHHHhhc-
Q 003615 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK---SPLSPIGILSRLQSIG- 661 (807)
Q Consensus 586 ~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~---~~IsP~~fl~~L~k~~- 661 (807)
+||.|+-++-|+|++||+|.+.+++|+|++.... ..+....+...|..|++.+|+.+ +.++|.+|++++-...
T Consensus 135 VGLnNik~~dy~n~vl~~ls~v~PlRnyFl~~~n---~~d~~~~lv~rl~~l~rklw~~r~fk~hvSphe~lqaV~~~s~ 211 (442)
T KOG2026|consen 135 VGLNNIKANDYANAVLQALSHVVPLRNYFLLEEN---YFDNLTELVQRLGELIRKLWNPRNFKGHVSPHEFLQAVMKLSK 211 (442)
T ss_pred eccchhhhHHHHHHHHHHHhccchhhhhhccccc---ccchhHHHHHHHHHHHHHhcChhhhcccCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987532 11445678888999999999764 7899999999986544
Q ss_pred ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECC----CCCceeeeeeceeEE
Q 003615 662 SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTK----CHGKSERQERMMDLT 737 (807)
Q Consensus 662 ~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~----C~~vS~~~E~f~~Ls 737 (807)
..|..+.|-|+.|||.|||+.||..+.. .++..+||+..|+|.++..-+-.. -.......-+|++|+
T Consensus 212 k~f~i~~q~DpveFlswllntlhs~l~~---------~k~~~SIi~~~fqG~~ri~k~~~~~~~~~~~~~i~~~~Fl~Lt 282 (442)
T KOG2026|consen 212 KRFRIGQQSDPVEFLSWLLNTLHSDLRG---------SKKASSIIHKSFQGEVRIVKEKQGEASENENKEISVMPFLYLT 282 (442)
T ss_pred hheecCCCCCHHHHHHHHHHHHHHHhCC---------CCCchhHhhHhhcceEEeeeeccccccccccceEEEEeeEEEE
Confidence 4799999999999999999999986532 225568999999999987655433 122345667999999
Q ss_pred eecCCC-------------CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCCCcc
Q 003615 738 VEIEGD-------------IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPLP 804 (807)
Q Consensus 738 L~Ip~~-------------~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~wvP 804 (807)
|++|.. -+.|.+.|+.|.....-+ |. ....+ +|+++.++|+|||+|++||+-++|.-
T Consensus 283 LDLP~~plfkD~~e~niiPQV~l~~lL~Kf~g~t~~e----~~-----~~~~~-~rf~l~k~P~ylifh~~rF~kNn~f~ 352 (442)
T KOG2026|consen 283 LDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTE----VV-----TPKLA-MRFRLTKLPRYLIFHMKRFKKNNFFK 352 (442)
T ss_pred ecCCCCCcccchhhhcccccchHHHHHHHhcCceeee----ec-----chhhh-hheeeecCCceEEEEeeeccccCccc
Confidence 999852 268999999987544332 11 11223 88999999999999999999988763
|
|
| >PF13423 UCH_1: Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-21 Score=204.96 Aligned_cols=210 Identities=23% Similarity=0.393 Sum_probs=178.7
Q ss_pred cccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHh-CC-CCCCCHHHHHHHHHhhccc
Q 003615 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAK-DG-KSPLSPIGILSRLQSIGSQ 663 (807)
Q Consensus 586 ~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~-s~-~~~IsP~~fl~~L~k~~~~ 663 (807)
.||.|.+++||+||+||+|+.+|++|+.++... .| ....|++|+|.-||..|. .. .....+..|++.++.....
T Consensus 1 ~GlEn~~~nsY~NslLQ~l~f~~~~r~~~l~h~---~c-~~e~cL~cELgfLf~ml~~~~~g~~cq~sNflr~l~~~~~a 76 (295)
T PF13423_consen 1 SGLENHIPNSYCNSLLQVLYFIPPLRNFLLSHL---EC-PKEFCLLCELGFLFDMLDSKAKGINCQASNFLRALSWIPEA 76 (295)
T ss_pred CCCcCCCCcchHHHHHHHHHhCHHHHHHHHhCc---CC-CccccHHHHHHHHHHHhhhhcCCCcChHHHHHHHHhcCHHH
Confidence 499999999999999999999999999998765 33 678999999999999998 44 3566788999999877655
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHhhhcC---CCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeec
Q 003615 664 LGNGREEDAHEFLRYAIDTMQSVCIEEAGV---NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740 (807)
Q Consensus 664 F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~---~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~I 740 (807)
...+.|||.++|+++||++|+.++...... ..........+.|.++|+......++|..|+..+.+.+....+.|..
T Consensus 77 ~~l~~~~~iq~~~~Fll~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~~~c~~c~~~~~~~~~~~~~~l~y 156 (295)
T PF13423_consen 77 AALGLQQDIQSLNRFLLEQLSMELLTFKPDIFHTSENSSSSPESSISQLFGTSFETTIRCTSCGHESVKESSTLVLDLPY 156 (295)
T ss_pred HhcchhHHHHHHHHHHHHHHhHHHHhcCcccccccccccCCCcchHHHHhCcceeeeecccccCCeEEeecceeeeeccC
Confidence 666779999999999999999887654321 01112224456799999999999999999999999999888888888
Q ss_pred CC--CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC-CC
Q 003615 741 EG--DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF-SP 802 (807)
Q Consensus 741 p~--~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~-~w 802 (807)
|. ...++.++|+.++..|.... .+|++|++++....+..|.++|+||.|.++|+... .|
T Consensus 157 p~~~~~~tf~~~Le~sl~~e~~~~---a~C~~C~~~~~~~~~r~i~~LPpVL~In~~~~~~~~~w 218 (295)
T PF13423_consen 157 PPSNSNVTFSQVLEHSLNREQQTR---AWCEKCNKYQPTEQRRTIRSLPPVLSINLNRYSEEEFW 218 (295)
T ss_pred CCCCccchHHHHHHHHHhhccccc---ccccccccccceeeeeeccCCCcEEEEEccCCCccccc
Confidence 75 35899999999999999886 99999999999999999999999999999999986 45
|
|
| >KOG1870 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-22 Score=241.32 Aligned_cols=162 Identities=25% Similarity=0.392 Sum_probs=135.0
Q ss_pred CccccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccc-----cccchHHHHHHHHHHHHhCCCC-CCCHHHH
Q 003615 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-----KKDWCFTCELENLILRAKDGKS-PLSPIGI 653 (807)
Q Consensus 580 ~~~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~-----~~~~~~l~qL~kLf~~l~s~~~-~IsP~~f 653 (807)
....|.+||.|+|||||||+.+|+|.+.++++.+++...+...++ .....+...+..+...+|.... .+.|..+
T Consensus 241 ~~~~g~~Gl~nlGntcfmns~~q~l~~~~~l~e~f~~~~~~~ein~~n~~~~~~~~~~~~~~l~~~~~s~~~~~v~~~~~ 320 (842)
T KOG1870|consen 241 PSERGETGLSNLGNTCFMNSALQCLSNTPELLEYFLSDLYDREINESNPLGSAGEVASSFADLIKQLWSGNKSAVAPTSF 320 (842)
T ss_pred CCcccccccccCCccccchhhhhhhccCcchhHHHHhHhhHhhhcccCCCcccceechhhhhHHHHhccCCccccCchhh
Confidence 456788999999999999999999999999999998765544221 3345567778888889997665 7999999
Q ss_pred HHHHHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCC-------------------CCCCCCCcccccccccceEE
Q 003615 654 LSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN-------------------ASGPLEDETTLIGLTFGGYL 714 (807)
Q Consensus 654 l~~L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~-------------------~~~~~~~~~siI~~lF~Gkl 714 (807)
...+....+.|.++.|||.+|||-+|+|.+|+.+....... +......+.+++.++|.|.+
T Consensus 321 ~~~~~~~a~~~~g~~q~d~~E~lafllDglhedl~~~~~kpy~~~~d~~~rp~~~~~~~~~~~~~~~~~s~i~d~~~~~~ 400 (842)
T KOG1870|consen 321 RTSLASFASEFSGYGQQDSQELLAFLLDGLHEDLNRVSSKPYVEGKDSDLRPDQEVAAEVWDYHLKRNRSVIVDLFDGTY 400 (842)
T ss_pred hhhhhhccccccCcccccchhhhhHHhhhhhHHhhccCCcCcccccccccchhhhhhHHHHHhhhhhccceeeeeeccee
Confidence 99999999999999999999999999999999775443320 11112346789999999999
Q ss_pred EEEEEECCCCCceeeeeeceeEEeecC
Q 003615 715 RSKIKCTKCHGKSERQERMMDLTVEIE 741 (807)
Q Consensus 715 ~s~I~C~~C~~vS~~~E~f~~LsL~Ip 741 (807)
++.++|..|++++.++++|.+|+|++|
T Consensus 401 ~S~~~c~~C~~~svt~d~f~~Lslp~p 427 (842)
T KOG1870|consen 401 KSTLQCPTCGKVSVTFDPFGYLSLPLP 427 (842)
T ss_pred cccccCccCCCceEEeeccccccccCC
Confidence 999999999999999999999998884
|
|
| >KOG4598 consensus Putative ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-23 Score=230.48 Aligned_cols=181 Identities=24% Similarity=0.375 Sum_probs=151.4
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhc
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIG 661 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~ 661 (807)
..+++||+|-.-|||+|+.+|+|+..|.|++.++... +.++....+.+.++ +
T Consensus 84 ~~~yvglvnqa~~~~l~~~~~a~~~~~~~~~~~yts~--------------------------~~~~et~dlt~sfg--w 135 (1203)
T KOG4598|consen 84 GHRYVGLVNQASNDLLFEQSCAISLHDSGISKCYTSE--------------------------NDSLETKDLTQSFG--W 135 (1203)
T ss_pred CcceEeehhhHHHHHHHHHhhhhccChhhhhhhhCCC--------------------------cccccchhhHhhcC--C
Confidence 3478999999999999999999999999999987422 22333333333332 1
Q ss_pred ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecC
Q 003615 662 SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741 (807)
Q Consensus 662 ~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip 741 (807)
..-....|+|.+|.-+.++|.|+-..+. .+...+|.+++.|++...+.|..|+..+.+.+.|++|+|++.
T Consensus 136 ~s~ea~~qhdiqelcr~mfdalehk~k~----------t~~~~li~~ly~g~m~d~v~cl~c~~e~~~~d~fld~pl~v~ 205 (1203)
T KOG4598|consen 136 TSNEAYDQHDVQELCRLMFDALEHKWKG----------TEHEKLIQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAVK 205 (1203)
T ss_pred CcchhhhhhhHHHHHHHHHHHHHhhhcC----------chHHHHHHHHhcchHHHHHHHHHcCccccccceeeccccccc
Confidence 1123358999999999999999863321 234568999999999999999999999999999999999996
Q ss_pred C-----CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 742 G-----DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 742 ~-----~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
. ...+++++|..|.+||.|+|.|+|-|++|+++++|.|..+|+.||-+|+||||||.|+
T Consensus 206 pfg~~~ay~sieeal~afvqpe~ldg~nqy~ce~ck~k~dahkgl~~~~fpy~lt~~lkrfdfd 269 (1203)
T KOG4598|consen 206 PFGAIHAYKSVEEALTAFVQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRFDFD 269 (1203)
T ss_pred CCcchhhhhhHHHHHHHhcChhhcCCccHHHHhhhhhhhhhhcCceeeccceeeEEeeeccccc
Confidence 3 2479999999999999999999999999999999999999999999999999999974
|
|
| >cd02672 Peptidase_C19P A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-20 Score=196.68 Aligned_cols=154 Identities=23% Similarity=0.375 Sum_probs=126.8
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhc
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIG 661 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~ 661 (807)
..+++||.|.|.|||+||+||+|+++|+||+. +. +.........|++|+|..|| ..+
T Consensus 12 ~t~~~gl~~~~~~~y~n~~lq~~~~~~~~~~~-~~--~~~~~~~~~~~l~~el~~lf------------s~~-------- 68 (268)
T cd02672 12 KTNYAGLENHITNSYCNSLLQLLYFIPPFRNF-TA--IILVACPKESCLLCELGYLF------------STL-------- 68 (268)
T ss_pred cccccccccCCccchHHHHHHHHHhcHHHHHH-HH--hhcccCCcCccHHHHHHHHH------------HHH--------
Confidence 34689999999999999999999999999998 22 22222256789999999999 111
Q ss_pred ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecC
Q 003615 662 SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741 (807)
Q Consensus 662 ~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip 741 (807)
.+-|-++|++.+..+.... + ..|++++.+.+++++|+|++|
T Consensus 69 ----------iq~F~~fll~~i~~~~~~~-------------------~----------~~C~~~s~~~~~~~~LsLpip 109 (268)
T cd02672 69 ----------IQNFTRFLLETISQDQLGT-------------------P----------FSCGTSRNSVSLLYTLSLPLG 109 (268)
T ss_pred ----------HHHHHHHHHHHHHHHhccc-------------------C----------CCCCceeeccccceeeeeecC
Confidence 1346688899888543110 0 679999999999999999999
Q ss_pred CC----CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccc----eeEEEEeeeeeC
Q 003615 742 GD----IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPN----ILTIALKRFQVF 800 (807)
Q Consensus 742 ~~----~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~----~LIIqLKRF~~~ 800 (807)
.. ..+|.+||+.|+++|.+. +|+|++|++++.|.|+++|.++|+ ||+||||||...
T Consensus 110 ~~~~~~~~sl~~cL~~~~~~E~~~---~~~C~~C~~~~~a~k~~~i~~lP~~L~~VL~i~lkrf~~~ 173 (268)
T cd02672 110 STKTSKESTFLQLLKRSLDLEKVT---KAWCDTCCKYQPLEQTTSIRHLPDILLLVLVINLSVTNGE 173 (268)
T ss_pred ccccccCCCHHHHHHHHhhhhhcc---cccccccCcccccEEEEEeecCCCcccceEEEEEeccChh
Confidence 53 479999999999998654 499999999999999999999999 999999999863
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-19 Score=209.98 Aligned_cols=219 Identities=27% Similarity=0.435 Sum_probs=175.5
Q ss_pred ccccccccCCCccchH--HHHHHHhcChhHHHHHhhccccccc-ccccchHHHHHHHHHHHHh---CCCCCCCHHHHHHH
Q 003615 583 LQPCGLINCGNSCYAN--VVLQCLAFTPPLTAYFLQGLHSKEC-AKKDWCFTCELENLILRAK---DGKSPLSPIGILSR 656 (807)
Q Consensus 583 lgp~GL~NLGNTCYmN--SVLQ~LfsiP~Fr~~ll~~~~~~~~-~~~~~~~l~qL~kLf~~l~---s~~~~IsP~~fl~~ 656 (807)
....|..|.+++||.| +|.|.+..+..++...+........ ......++..+..++.... .....+.|..|+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~p~~~~~~ 309 (587)
T KOG1864|consen 230 ERVFGTNNFSNTCCCNFQSVEEALYFCRPFREAVLLYLTSLKRSYIIKEELLTCLLDLFSSISSRKKLVGRISPTRFISD 309 (587)
T ss_pred ccccCccccCccccccchhhHHHHHhhhhhcccccchhhcccchhhhhHHHHHHhhhhccchhhhcccccccCcchhhhh
Confidence 3458999999999999 9999999999988665442221111 0122333444444443322 23467899999999
Q ss_pred HHhhcccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCC----------CCCC------------CCcccccccccceEE
Q 003615 657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA----------SGPL------------EDETTLIGLTFGGYL 714 (807)
Q Consensus 657 L~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~----------~~~~------------~~~~siI~~lF~Gkl 714 (807)
+++....|.++.|||||||+.++++.+++....+..... .... .....++..+|.|++
T Consensus 310 ~~~~~~~f~~~~qQda~eF~~~l~~~~~e~~~~~~~~~~~~~~~~~~~gn~~~~~~~~~~~~~~~~~~~~~v~~lf~g~l 389 (587)
T KOG1864|consen 310 LIKENELFTNGMQQDAHEFLNFLLNEISETLERESSGTTTKVSPKESDGNSSTSAASWTNKGHHKSLRENWVSKLFQGIL 389 (587)
T ss_pred hhhcCCccCchhhccHHHHhhhhccchhhhhhhhccCCcccccccCCCCccccccccccccccccccchhHHHHhhcCee
Confidence 999999999999999999999999999986544331100 0000 124578999999999
Q ss_pred EEEEEECCCCCceeeeeeceeEEeecCC-CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEE
Q 003615 715 RSKIKCTKCHGKSERQERMMDLTVEIEG-DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793 (807)
Q Consensus 715 ~s~I~C~~C~~vS~~~E~f~~LsL~Ip~-~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIq 793 (807)
..+.+|..|..++.+.+.|.+++++++. +..++..||+.|..+|.+.|+|+|+|++|..++.|.|++.++++|.+|+||
T Consensus 390 ~~et~Clsc~t~T~~de~f~D~~~~v~~de~~si~~~l~~~~~~e~l~g~nky~c~~c~s~qeae~~l~~k~lp~~L~l~ 469 (587)
T KOG1864|consen 390 TNETRCLSCETITSRDEGFLDLSVAVEIDENTSITNLLKSFSSTETLSGENKYSCENCCSLQEAERRLKIKKLPYVLTLH 469 (587)
T ss_pred eeeeeeccccccccccccccccceeccccccccHHHHHHHhcchhhccCCCcccccccCchhhHHHhccccCCcceeeee
Confidence 9999999999999999999999999985 458999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeCC
Q 003615 794 LKRFQVFS 801 (807)
Q Consensus 794 LKRF~~~~ 801 (807)
||||.+..
T Consensus 470 Lkrfk~~~ 477 (587)
T KOG1864|consen 470 LKRFKYSE 477 (587)
T ss_pred hhcccccc
Confidence 99999863
|
|
| >KOG1871 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.6e-17 Score=175.53 Aligned_cols=214 Identities=23% Similarity=0.288 Sum_probs=152.1
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhccc-ccccccccchHHHHHHHHHHHHh------------------
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH-SKECAKKDWCFTCELENLILRAK------------------ 642 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~-~~~~~~~~~~~l~qL~kLf~~l~------------------ 642 (807)
.+.|+|++|-||-|||||+||+|+.+++|.+.+....- ..........++.++..++....
T Consensus 25 ~i~Prg~ink~n~c~~ns~Lqal~~c~pfy~l~~~i~~~~~~~~~~stp~lda~~~~~~df~n~~~~k~~r~N~~~~~~~ 104 (420)
T KOG1871|consen 25 PIDPRGSINKCNICFMNSILQALLYCSPFYNLLELIKRADGTVKEGSTPLLDASRPASSDFNNDSDAKLPRKNSLRVPEH 104 (420)
T ss_pred ccCCccccccceeEeeHHHHHHHHhCccHHHHHHhhhhhcCceecccchhHHHHHHHHhhccccchhhhhhhccCCcccc
Confidence 37899999999999999999999999999888754221 11111223334444444443221
Q ss_pred -----------CCCCCCCHHHHHHHHHhhcc--cCCCCccccHHHHHHHHHHHHHHHHHhhhcC--------------C-
Q 003615 643 -----------DGKSPLSPIGILSRLQSIGS--QLGNGREEDAHEFLRYAIDTMQSVCIEEAGV--------------N- 694 (807)
Q Consensus 643 -----------s~~~~IsP~~fl~~L~k~~~--~F~~~~QQDA~EFL~~LLd~L~ee~~~e~~~--------------~- 694 (807)
.+..++-|..+...++.... ....|+|.||.|||.++||.||++..+..+. +
T Consensus 105 ~~~~ses~~~d~~~dav~~d~~~~~l~t~~~~e~~~~g~qedAeefl~~~ld~lhee~~~v~~~~~~~n~e~t~~~~i~~ 184 (420)
T KOG1871|consen 105 VVEKSESNKSDLQGDAVKPDPIYLDLLTMSRFESLQVGKQEDAEEFLLDNLDFLHEESSEVPTELVPPNDEFTPRGLINN 184 (420)
T ss_pred ccchhhhhhhcccCccccCCchhhhcccCCchhhccccccccHHHHHHHHHhhhhHHHHhhhhhhcCCcccccccccccc
Confidence 01133444444444432221 2356899999999999999999976432110 0
Q ss_pred ----CCCC--------------------------CCCcccccccccceEEEEEEEECCCCCceeeeeeceeEEeecCC-C
Q 003615 695 ----ASGP--------------------------LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG-D 743 (807)
Q Consensus 695 ----~~~~--------------------------~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~~E~f~~LsL~Ip~-~ 743 (807)
.... ..-..+.|.++|+|++++.+.=.. .+++..-+||..|.|+|.. .
T Consensus 185 ~n~~n~~s~~e~~~~~~~~~~~~gk~~k~~i~r~~~~~~spiS~ifgg~~rs~l~~~~-nkeS~tlqPF~tlqldiq~~~ 263 (420)
T KOG1871|consen 185 GNLCNLDSTEEAGLSESSGVQLLGKIQKTDIPRADSFVRSPISEIFGGQLRSVLYQPS-NKESATLQPFFTLQLDIQSEK 263 (420)
T ss_pred cccccccchhhcccccCchhhhcCCcccCccCCCCCcccCcHHHhhccccccceeccc-cccccccCccceeeeeeeccc
Confidence 0000 001246899999999999987655 6778999999999999953 4
Q ss_pred CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeC
Q 003615 744 IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800 (807)
Q Consensus 744 ~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~ 800 (807)
..+++++|..+...|.+.+ |.-. -+....+.+++.+.+||.+|++|||||-|.
T Consensus 264 i~sv~~ales~~~re~lp~---~st~-s~~eV~~s~q~~leklp~vlilhlkrF~ye 316 (420)
T KOG1871|consen 264 IHSVQDALESLVARESLPG---YSTK-SGQEVEASSQTTLEKLPPVLILHLKRFVYE 316 (420)
T ss_pred cCCHHHHhhccChhhcccc---eecC-CCCeechhhhhhHhhcchhhhhhhhHHHHH
Confidence 6899999999999999986 5544 777888999999999999999999999984
|
|
| >KOG1872 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6e-15 Score=163.52 Aligned_cols=208 Identities=19% Similarity=0.214 Sum_probs=159.7
Q ss_pred cccccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccc---cccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 003615 582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA---KKDWCFTCELENLILRAKDGKSPLSPIGILSRLQ 658 (807)
Q Consensus 582 ~lgp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~---~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~ 658 (807)
...++||.|+|||||||+.+|+|-..|+++..+-......... .....+..+|+.+|..+... .++.|..++..+.
T Consensus 102 ~~lp~gl~nlgNtcymnrtVq~lk~v~el~~~~s~~~~~~~~~~t~~~a~~i~~~mR~~f~~~~~~-~~v~pi~llqtl~ 180 (473)
T KOG1872|consen 102 LPLPVGLPNLGNTCYMNRTVQCLKGVPELPDALSLYKRKRGRGDTWERRRRISIETRTCFRPLCEK-GAVAPINLLQTLS 180 (473)
T ss_pred ccCCccccchhHHHHhhhhhhhhhcCccCcchhhccchhccCCchhhhhhhHHHHHHHHHHhhhcc-CCcchHHHHHHHH
Confidence 3457899999999999999999999999998876533211111 11355778899999999988 9999999999999
Q ss_pred hhcccCCC------CccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceEEEEEEEECCCCCceee--e
Q 003615 659 SIGSQLGN------GREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSER--Q 730 (807)
Q Consensus 659 k~~~~F~~------~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~~C~~vS~~--~ 730 (807)
+..|+|.. ..||||.|++..++-.++..+...... ......+..+|++.+..+..|..-...... .
T Consensus 181 ~~~Pqfa~~~~~g~~~qqda~ec~~~~m~~l~~~~~~~~~~------~~~~~~~d~~f~~~~~~t~~~~e~e~~~~~~~~ 254 (473)
T KOG1872|consen 181 SQYPQFAEWVEYGIYMQQDAAECWMEEPGMLTEALTVATEA------PCLEAEAAAGFGAEFSTTMSCSEGEDEGGGAGR 254 (473)
T ss_pred HHhHHHHHHhhhhhHHHHHHhHhHHHhhhheeccccccccc------cchhHHHHHhhccccccceeeccCccccccccc
Confidence 88888854 799999999999999998744222111 134456888999999999999886655443 7
Q ss_pred eeceeEEeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCC
Q 003615 731 ERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801 (807)
Q Consensus 731 E~f~~LsL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~ 801 (807)
|.|..|..-|......+...|+.-+..++- ...+.-|......|.+.|.+||+||+||+-||.+..
T Consensus 255 E~~~~L~c~i~~~~~~~k~Gl~~~~~e~~~-----K~s~~lgr~a~y~k~~~isrlP~ylTvq~vrf~~k~ 320 (473)
T KOG1872|consen 255 ELVDQLKCIINKTVHDMRFGLKSGLSEEIQ-----KISSILGRPAAYQKVMYISRLPEYLTVQEVRFFSKA 320 (473)
T ss_pred ccccccceEEeeeechhhhhhhhhhhhhhh-----ccCcccCCChHHHHHhHhhcCcccceEEEEEEEecc
Confidence 888889988887777777777765544432 344455555556788999999999999999999854
|
|
| >cd02670 Peptidase_C19N A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.9e-13 Score=138.74 Aligned_cols=114 Identities=23% Similarity=0.314 Sum_probs=86.2
Q ss_pred ccccCCC-ccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhhcccCC
Q 003615 587 GLINCGN-SCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLG 665 (807)
Q Consensus 587 GL~NLGN-TCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~~~~IsP~~fl~~L~k~~~~F~ 665 (807)
|+.|.+| +|||-|.|=+||.
T Consensus 1 g~~~~~~~~cy~d~~~~~~f~----------------------------------------------------------- 21 (241)
T cd02670 1 GAQNHCNVSCYLDALLFAMFA----------------------------------------------------------- 21 (241)
T ss_pred CCccccCceeehHHHHHHHHH-----------------------------------------------------------
Confidence 7899999 9999999999876
Q ss_pred CCccccHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccccccccceE-EEEEEEECCCCCceeeeeeceeEEeecCC--
Q 003615 666 NGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGY-LRSKIKCTKCHGKSERQERMMDLTVEIEG-- 742 (807)
Q Consensus 666 ~~~QQDA~EFL~~LLd~L~ee~~~e~~~~~~~~~~~~~siI~~lF~Gk-l~s~I~C~~C~~vS~~~E~f~~LsL~Ip~-- 742 (807)
+|||+.|||.+|+++|+.-+. ++.-++|.|- ...... +...|.++.|.++.+.
T Consensus 22 --~q~D~~e~~~~l~~~~~~~~~---------------~~~~~~~~~g~~~~~~~-------~~~~e~~l~l~ip~~~~~ 77 (241)
T cd02670 22 --EQQDPEEFFNFITDKLLMPLL---------------EPKVDIIHGGKKDQDDD-------KLVNERLLQIPVPDDDDG 77 (241)
T ss_pred --HhcCHHHHHHHHHHHHhhhhh---------------hHHHHHHhcCccccccc-------cccccceEEeecccCCCC
Confidence 699999999999999985322 1234555442 221110 3335666666666542
Q ss_pred CCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEEEeeeeeCCCcccC
Q 003615 743 DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPLPIS 806 (807)
Q Consensus 743 ~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIqLKRF~~~~wvP~k 806 (807)
..++|++||+.|++.|+ |.++|+||+||||||.+..|.++|
T Consensus 78 ~~~tLedcLe~~~~~e~-----------------------i~~lP~vLiIhLKRF~~~~~~~~K 118 (241)
T cd02670 78 GGITLEQCLEQYFNNSV-----------------------FAKAPSCLIICLKRYGKTEGKAQK 118 (241)
T ss_pred CcCCHHHHHHHHhchhh-----------------------hhhCCCeEEEEEEccccCCCccee
Confidence 35899999999998886 899999999999999997776665
|
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome. |
| >PF01753 zf-MYND: MYND finger; InterPro: IPR002893 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.9e-10 Score=83.38 Aligned_cols=37 Identities=57% Similarity=1.200 Sum_probs=34.1
Q ss_pred cCCCCcccccccccCccceecChhhhhhhcchhhhccC
Q 003615 75 CAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDEC 112 (807)
Q Consensus 75 C~~C~~~~~~rCs~Ck~v~YCs~~CQ~~~W~~~HK~~C 112 (807)
|..|+++++.+|++|+.++|||++||++||. .||.+|
T Consensus 1 C~~C~~~~~~~C~~C~~~~YCs~~Cq~~~w~-~Hk~~C 37 (37)
T PF01753_consen 1 CAVCGKPALKRCSRCKSVYYCSEECQRADWP-YHKFEC 37 (37)
T ss_dssp -TTTSSCSSEEETTTSSSEESSHHHHHHHHH-HHCCTH
T ss_pred CcCCCCCcCCcCCCCCCEEecCHHHHHHHHH-HHhhhC
Confidence 7899999888999999999999999999997 899886
|
Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MYND-type zinc finger domains. The MYND domain (myeloid, Nervy, and DEAF-1) is present in a large group of proteins that includes RP-8 (PDCD2), Nervy, and predicted proteins from Drosophila, mammals, Caenorhabditis elegans, yeast, and plants [, , ]. The MYND domain consists of a cluster of cysteine and histidine residues, arranged with an invariant spacing to form a potential zinc-binding motif []. Mutating conserved cysteine residues in the DEAF-1 MYND domain does not abolish DNA binding, which suggests that the MYND domain might be involved in protein-protein interactions []. Indeed, the MYND domain of ETO/MTG8 interacts directly with the N-CoR and SMRT co-repressors [, ]. Aberrant recruitment of co-repressor complexes and inappropriate transcriptional repression is believed to be a general mechanism of leukemogenesis caused by the t(8;21) translocations that fuse ETO with the acute myelogenous leukemia 1 (AML1) protein. ETO has been shown to be a co-repressor recruited by the promyelocytic leukemia zinc finger (PLZF) protein []. A divergent MYND domain present in the adenovirus E1A binding protein BS69 was also shown to interact with N-CoR and mediate transcriptional repression []. The current evidence suggests that the MYND motif in mammalian proteins constitutes a protein-protein interaction domain that functions as a co-repressor-recruiting interface. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3QWW_A 3QWV_A 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3RU0_A .... |
| >KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-07 Score=111.78 Aligned_cols=208 Identities=19% Similarity=0.344 Sum_probs=137.3
Q ss_pred cccccccCCCccchHHHHHHHhcChhHHHHHhhcccccccccccchHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHhhcc
Q 003615 584 QPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-KSPLSPIGILSRLQSIGS 662 (807)
Q Consensus 584 gp~GL~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~~~~~~~~~~~l~qL~kLf~~l~s~-~~~IsP~~fl~~L~k~~~ 662 (807)
.+.||.--+-.-|.|++||+|+.+|+||..++... | ....|++|+|.-||..|... ..+.....|+.+++....
T Consensus 498 ~yaGLe~~i~N~YcNamiQllyfl~~~r~~vl~H~----C-~~e~CL~CELGFLF~Ml~~S~G~~Cqa~NFlraf~t~~~ 572 (1118)
T KOG1275|consen 498 TYAGLETDIPNSYCNAMIQLLYFLPPIRSIVLRHI----C-TKEFCLLCELGFLFTMLDSSTGDPCQANNFLRAFRTNPE 572 (1118)
T ss_pred eeeccCCCCchHHHHHHHHHHHhccHHHHHHHcCc----c-chhHHHHHHHHHHHHHHhhhcCCccchhHHHHHHhhChH
Confidence 45888888888899999999999999999998753 3 67899999999999988743 346777888888865432
Q ss_pred cCCCC----------------ccccHHHHHHHHHHHHHH--HHH---hhhcCCCCCCCCCcccccccccceEEEEEEEEC
Q 003615 663 QLGNG----------------REEDAHEFLRYAIDTMQS--VCI---EEAGVNASGPLEDETTLIGLTFGGYLRSKIKCT 721 (807)
Q Consensus 663 ~F~~~----------------~QQDA~EFL~~LLd~L~e--e~~---~e~~~~~~~~~~~~~siI~~lF~Gkl~s~I~C~ 721 (807)
.-.-| --|||..|..-...+..+ .+. +..........-.....+.+.|+-+++....|.
T Consensus 573 a~~LG~vl~d~~~~~~~~~~~liq~~~~~~~set~~~~d~~~~~~~~~s~~~~~~~~~vn~~~~l~q~F~~~~e~~~~Cg 652 (1118)
T KOG1275|consen 573 ASALGLVLSDTQISGTVNDDVLIQDAEGFISSETSRHLDCQDCRGLQQSESVDGESFKVNYAPVLQQSFCQEIEKSLRCG 652 (1118)
T ss_pred hhhhcccccchhhccccchHHHhhhhhhccchhhhhhhhHHHhhhhhhhhcccCceeeecchhHHHHHhhhHHHHhhhcc
Confidence 11110 123444333322222211 000 000111111111233578999999999999999
Q ss_pred CCCCceeeeeeceeEEeecCCC--------CCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEEEEeccccceeEEE
Q 003615 722 KCHGKSERQERMMDLTVEIEGD--------IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793 (807)
Q Consensus 722 ~C~~vS~~~E~f~~LsL~Ip~~--------~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~~~I~~lP~~LIIq 793 (807)
.|+..+.+......+.|..|.. .-.+.+.|++-.. +...-+-+|+.|++.+....+..+..+|++|.|.
T Consensus 653 ~C~~~~~~~k~l~~~~lsyp~~~~id~~~~~~~F~~iL~R~l~---l~kn~~~~C~~C~k~ep~~q~~~vr~LPd~L~in 729 (1118)
T KOG1275|consen 653 ECGDEKQKSKSLLRKVLSYPNVLLIDTLAKSNNFVEILKRSLS---LFKNKQAWCETCTKPEPTSQKKNVRSLPDCLSIN 729 (1118)
T ss_pred cccchhhhhhhhhheeecCCCccchhhcccccchHHHhhhhhh---cccccccccccccCCCCcccccccccCcceeeee
Confidence 9999988776666666666642 1233344443322 2211236899999999999999999999999998
Q ss_pred Eeeeee
Q 003615 794 LKRFQV 799 (807)
Q Consensus 794 LKRF~~ 799 (807)
..-+..
T Consensus 730 ~~~~~~ 735 (1118)
T KOG1275|consen 730 TCLNVH 735 (1118)
T ss_pred eeccch
Confidence 776653
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-08 Score=106.55 Aligned_cols=48 Identities=38% Similarity=0.821 Sum_probs=42.3
Q ss_pred cCCCCCCcCCCCcc-cccccccCccceecChhhhhhhcchhhhccCCCCC
Q 003615 68 YVPQHPQCAVCFSP-TTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPS 116 (807)
Q Consensus 68 ~~~~~~~C~~C~~~-~~~rCs~Ck~v~YCs~~CQ~~~W~~~HK~~C~~~~ 116 (807)
.+.....|..||.+ +.+||+.||++.||+++||+-||. .||++|..+-
T Consensus 315 ~~~d~~fCstCG~~ga~KrCs~CKav~YCdqeCQk~hWf-~HKK~C~~L~ 363 (396)
T KOG1710|consen 315 IAADCQFCSTCGHPGAKKRCSQCKAVAYCDQECQKFHWF-IHKKVCSFLL 363 (396)
T ss_pred eEEecccccccCCCCccchhhhhHHHHHHHHHHHHhhhH-HHHHHHHHHH
Confidence 33456789999976 589999999999999999999999 8999999883
|
|
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.58 E-value=4.1e-05 Score=90.38 Aligned_cols=100 Identities=24% Similarity=0.317 Sum_probs=59.1
Q ss_pred cccCCCccchHHHHHHHhcChhHHHHHhhcccc--------cccccccchHHHHHHHHHHHHh-----C-CCCCC--CHH
Q 003615 588 LINCGNSCYANVVLQCLAFTPPLTAYFLQGLHS--------KECAKKDWCFTCELENLILRAK-----D-GKSPL--SPI 651 (807)
Q Consensus 588 L~NLGNTCYmNSVLQ~LfsiP~Fr~~ll~~~~~--------~~~~~~~~~~l~qL~kLf~~l~-----s-~~~~I--sP~ 651 (807)
|+|.||+||.||+||+|..+|+|+-.+...... +..........+..+.+...+. + ....+ +-.
T Consensus 34 l~n~gn~cy~ns~~Q~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 113 (587)
T KOG1864|consen 34 LVNTGNSCYYNSTLQALSSCPPFVSRVEQLPRLVRPKIEALKDSLNRKKTRIFDEKSLEAVTLNFSKNSSSNESFNLSVT 113 (587)
T ss_pred EeecCCchhhhhHHHHHhhccHHHHHHHHHHHhcccccccCchhhccccccchhHHHHHHHHHhhhccCCccccccchHH
Confidence 999999999999999999999999888652111 1111111211222222211111 0 01111 112
Q ss_pred HHHHHH---HhhcccCCCCccccHHHHHHHHHHHHHHHH
Q 003615 652 GILSRL---QSIGSQLGNGREEDAHEFLRYAIDTMQSVC 687 (807)
Q Consensus 652 ~fl~~L---~k~~~~F~~~~QQDA~EFL~~LLd~L~ee~ 687 (807)
.+.... .+....|....|+||++|+.-|+-.+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~~~~~ 152 (587)
T KOG1864|consen 114 QLVQSRLNNGKKYAEFNNNDQRDAHNFLLELMAMVDDVM 152 (587)
T ss_pred HHHHHHhhhhhhhhhhhcccHhhhhhhhhhhhHHHhhhc
Confidence 222222 344557889999999999999988887643
|
|
| >KOG3612 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00011 Score=83.95 Aligned_cols=45 Identities=29% Similarity=0.783 Sum_probs=40.8
Q ss_pred CCCCcCCCCcccccccccCccceecChhhhhhhcchhhhccCCCCCcc
Q 003615 71 QHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSIS 118 (807)
Q Consensus 71 ~~~~C~~C~~~~~~rCs~Ck~v~YCs~~CQ~~~W~~~HK~~C~~~~~~ 118 (807)
+.--|++|...+...| |..+.||+.+||..||+ +|++.|+.-...
T Consensus 526 kKQWC~nC~~EAiy~C--CWNTSYCsveCQQ~HW~-~H~ksCrrk~~~ 570 (588)
T KOG3612|consen 526 KKQWCYNCLDEAIYHC--CWNTSYCSVECQQGHWP-EHRKSCRRKKTN 570 (588)
T ss_pred HHHHHHhhhHHHHHHh--hccccccCcchhhccch-hHhhhhcccCCC
Confidence 4567999999999999 99999999999999999 899999876655
|
|
| >KOG2061 consensus Uncharacterized MYND Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.045 Score=60.90 Aligned_cols=50 Identities=42% Similarity=0.858 Sum_probs=44.3
Q ss_pred CCCcCCCCcccccccccCccceecChhhhhhhcchhhhccCCCCCccccc
Q 003615 72 HPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHEI 121 (807)
Q Consensus 72 ~~~C~~C~~~~~~rCs~Ck~v~YCs~~CQ~~~W~~~HK~~C~~~~~~~~~ 121 (807)
...|..|+..+...|.+|+.+.|||..+|..||+.+|+..|.......+.
T Consensus 136 ~~~~~~~~~~a~~~~~~~~~a~~~S~~~q~~d~~~~~~~a~aq~~~~~~~ 185 (362)
T KOG2061|consen 136 ADLCGSCGCSAPAACSPCKAAAYCSKKHQSLDWPKGHKDACAQPSTLGEI 185 (362)
T ss_pred cchhccCcccCcccccccchhhhcCchhhcccccccccccccCccccccc
Confidence 47899999889999999999999999999999997899999877665543
|
|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.066 Score=61.11 Aligned_cols=42 Identities=29% Similarity=0.751 Sum_probs=35.9
Q ss_pred CCCCCcCCCCcccccccccCcc-------ceecChhhhhhhcchhhhccC
Q 003615 70 PQHPQCAVCFSPTTTRCARCKA-------VRYCSGKCQIVHWRQGHKDEC 112 (807)
Q Consensus 70 ~~~~~C~~C~~~~~~rCs~Ck~-------v~YCs~~CQ~~~W~~~HK~~C 112 (807)
+....|+.|++.+...|-.|.. .++||++|=+..|+ .||..=
T Consensus 7 ~~~~~c~~c~~~a~l~Cp~C~k~~~~~~~s~fCsq~CFk~~w~-~Hk~~h 55 (396)
T PLN03158 7 TSPLACARCSKPAHLQCPKCLELKLPREGASFCSQDCFKAAWS-SHKSVH 55 (396)
T ss_pred CCcccccCCCCcccccCccchhcCCCCCCceeECHHHHHHHHH-HHHHHH
Confidence 4566799999999999999965 68999999999999 787764
|
|
| >PF15499 Peptidase_C98: Ubiquitin-specific peptidase-like, SUMO isopeptidase | Back alignment and domain information |
|---|
Probab=87.67 E-value=0.2 Score=53.57 Aligned_cols=77 Identities=17% Similarity=0.380 Sum_probs=48.2
Q ss_pred ccccccccceEEEEEEEECCCCCceeee-e-eceeEEeecCCCCCCHHHHHHhhhcceeeCCCCceecCCCCceeeEEEE
Q 003615 703 TTLIGLTFGGYLRSKIKCTKCHGKSERQ-E-RMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKK 780 (807)
Q Consensus 703 ~siI~~lF~Gkl~s~I~C~~C~~vS~~~-E-~f~~LsL~Ip~~~~SLed~L~~f~~~E~LdgdNky~CekC~~k~~A~K~ 780 (807)
...+.++|.-...=...|..||+..... . ....++=-+| .|- .+....---|.+|+.+. ..++
T Consensus 120 d~~~E~lF~~sf~WeFeC~~Cg~~~~~R~~K~L~TFtnv~p-----------dwh---PLnA~h~~pCn~C~~ks-Q~rk 184 (275)
T PF15499_consen 120 DPWIEKLFLYSFSWEFECSQCGHKYQNRCTKTLVTFTNVIP-----------DWH---PLNAVHFGPCNSCNSKS-QRRK 184 (275)
T ss_pred chHHHhHhheeeEEEEEccccCChhhhhheeeecccCCCCC-----------CCC---cccccccCCCcccCChH-HhHh
Confidence 4568999999999999999999874321 1 0111111112 111 11111113599998754 4567
Q ss_pred EEeccccceeEEEE
Q 003615 781 LTIVEAPNILTIAL 794 (807)
Q Consensus 781 ~~I~~lP~~LIIqL 794 (807)
+.+.++|+++++|+
T Consensus 185 Mvlekv~~vfmLHF 198 (275)
T PF15499_consen 185 MVLEKVPPVFMLHF 198 (275)
T ss_pred hhhhcCchhhhhhh
Confidence 89999999999985
|
|
| >PF13824 zf-Mss51: Zinc-finger of mitochondrial splicing suppressor 51 | Back alignment and domain information |
|---|
Probab=83.95 E-value=0.31 Score=40.44 Aligned_cols=45 Identities=20% Similarity=0.445 Sum_probs=37.4
Q ss_pred CcCCCCc----ccccccccCccceecChhhhhhhcchhhhccCCCCCccc
Q 003615 74 QCAVCFS----PTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISH 119 (807)
Q Consensus 74 ~C~~C~~----~~~~rCs~Ck~v~YCs~~CQ~~~W~~~HK~~C~~~~~~~ 119 (807)
.|..|++ .....|..|....|||++.=..|.. .|+..|..++...
T Consensus 1 ~Cpv~~~~~~~~v~~~Cp~cGipthcS~ehw~~D~e-~H~~~c~~LRqvN 49 (55)
T PF13824_consen 1 LCPVCKKDLPAHVNFECPDCGIPTHCSEEHWEDDYE-EHRQLCERLRQVN 49 (55)
T ss_pred CCCCCccccccccCCcCCCCCCcCccCHHHHHHhHH-HHHHHHHHHHHhc
Confidence 4778877 4578899999999999999888888 7999998776643
|
|
| >PF04438 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
Probab=80.53 E-value=0.97 Score=33.02 Aligned_cols=28 Identities=46% Similarity=0.997 Sum_probs=21.8
Q ss_pred CCcCCCCcccccccccCccceecChhhhh
Q 003615 73 PQCAVCFSPTTTRCARCKAVRYCSGKCQI 101 (807)
Q Consensus 73 ~~C~~C~~~~~~rCs~Ck~v~YCs~~CQ~ 101 (807)
..|..|+..+.-+|.+|... |||.+|-+
T Consensus 3 ~~C~vC~~~~kY~Cp~C~~~-~CSl~C~k 30 (30)
T PF04438_consen 3 KLCSVCGNPAKYRCPRCGAR-YCSLACYK 30 (30)
T ss_dssp EEETSSSSEESEE-TTT--E-ESSHHHHH
T ss_pred CCCccCcCCCEEECCCcCCc-eeCcEeEC
Confidence 47999999889999999986 99999964
|
Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the HIT-type zinc finger, which contains 7 conserved cysteines and one histidine that can potentially coordinate two zinc atoms. It has been named after the first protein that originally defined the domain: the yeast HIT1 protein (P46973 from SWISSPROT) []. The HIT-type zinc finger displays some sequence similarities to the MYND-type zinc finger. The function of this domain is unknown but it is mainly found in nuclear proteins involved in gene regulation and chromatin remodeling. This domain is also found in the thyroid receptor interacting protein 3 (TRIP-3) Q15649 from SWISSPROT, that specifically interacts with the ligand binding domain of the thyroid receptor. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2YQP_A 2YQQ_A 1X4S_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 807 | ||||
| 4fip_A | 476 | Structure Of The Saga Ubp8(S144n)SGF11(1-72, Delta- | 3e-18 | ||
| 3mhh_A | 476 | Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE | 1e-17 | ||
| 3m99_A | 471 | Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Mod | 2e-17 | ||
| 2hd5_A | 359 | Usp2 In Complex With Ubiquitin Length = 359 | 4e-15 | ||
| 3v6c_A | 367 | Crystal Structure Of Usp2 In Complex With Mutated U | 5e-15 | ||
| 2ibi_A | 374 | Covalent Ubiquitin-Usp2 Complex Length = 374 | 2e-14 | ||
| 3nhe_A | 348 | High Resolution Structure (1.26a) Of Usp2a In Compl | 6e-14 | ||
| 3i3t_A | 355 | Crystal Structure Of Covalent Ubiquitin-usp21 Compl | 7e-14 | ||
| 2y5b_A | 370 | Structure Of Usp21 In Complex With Linear Diubiquit | 8e-14 | ||
| 3mtn_A | 373 | Usp21 In Complex With A Ubiquitin-based, Usp21-spec | 9e-14 | ||
| 3n3k_A | 396 | The Catalytic Domain Of Usp8 In Complex With A Usp8 | 1e-13 | ||
| 2gfo_A | 396 | Structure Of The Catalytic Domain Of Human Ubiquiti | 4e-12 | ||
| 2y6e_A | 367 | Ubiquitin Specific Protease 4 Is Inhibited By Its U | 6e-12 | ||
| 2f1z_A | 522 | Crystal Structure Of Hausp Length = 522 | 1e-10 | ||
| 1nbf_A | 353 | Crystal Structure Of A Ubp-Family Deubiquitinating | 6e-10 | ||
| 1nb8_A | 353 | Structure Of The Catalytic Domain Of Usp7 (Hausp) L | 6e-09 | ||
| 2ayn_A | 404 | Structure Of Usp14, A Proteasome-Associated Deubiqu | 4e-05 | ||
| 2dan_A | 60 | The Solution Structure Of The Mynd Domain (Leu384-C | 3e-04 |
| >pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72, Delta-Znf)SUS1SGF73 Dub Module Length = 476 | Back alignment and structure |
|
| >pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE Length = 476 | Back alignment and structure |
|
| >pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module Length = 471 | Back alignment and structure |
|
| >pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin Length = 359 | Back alignment and structure |
|
| >pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated Ubiquitin Length = 367 | Back alignment and structure |
|
| >pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex Length = 374 | Back alignment and structure |
|
| >pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With Ubiquitin Length = 348 | Back alignment and structure |
|
| >pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex Length = 355 | Back alignment and structure |
|
| >pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear Diubiquitin-Aldehyde Length = 370 | Back alignment and structure |
|
| >pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8 Specific Inhibitor Length = 396 | Back alignment and structure |
|
| >pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin Carboxyl-terminal Hydrolase 8 Length = 396 | Back alignment and structure |
|
| >pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its Ubiquitin- Like Domain Length = 367 | Back alignment and structure |
|
| >pdb|2F1Z|A Chain A, Crystal Structure Of Hausp Length = 522 | Back alignment and structure |
|
| >pdb|1NBF|A Chain A, Crystal Structure Of A Ubp-Family Deubiquitinating Enzyme In Isolation And In Complex With Ubiquitin Aldehyde Length = 353 | Back alignment and structure |
|
| >pdb|1NB8|A Chain A, Structure Of The Catalytic Domain Of Usp7 (Hausp) Length = 353 | Back alignment and structure |
|
| >pdb|2AYN|A Chain A, Structure Of Usp14, A Proteasome-Associated Deubiquitinating Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2DAN|A Chain A, The Solution Structure Of The Mynd Domain (Leu384-Cys430) Of Human Zinc Finger Mynd Domain Containing Protein 10 Length = 60 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} PDB: 2hd5_A 2ibi_A Length = 348 | Back alignment and structure |
|---|
Score = 248 bits (634), Expect = 1e-75
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 27/240 (11%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC---AKKDWCFTCELENLI--LR 640
GL N GN+C+ N +LQCL+ T L Y LQ L+ ++ + E LI +
Sbjct: 10 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 69
Query: 641 AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVC------------- 687
+SP +++Q + ++DA EFLR+ +D + +
Sbjct: 70 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPEN 129
Query: 688 ------IEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741
E+ LE E + IG F G L+S + CT C S + DL++ I
Sbjct: 130 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 189
Query: 742 GDI---GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L + +R +T ++LDG+ K C RC+ ++ KK +I P IL + LKRF
Sbjct: 190 KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFS 249
|
| >2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A Length = 396 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 5e-68
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 26/239 (10%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFT-----CELENLILR 640
GL N GN+CY N +LQCL P L YF + + + + + E ++
Sbjct: 63 TGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKA 122
Query: 641 AKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPL 699
G+ +SP + I Q ++D+ E L + +D + +
Sbjct: 123 LWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEE 182
Query: 700 ED-------------------ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
+ ++I F G +S ++C CH KS E M L++ +
Sbjct: 183 NNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPL 242
Query: 741 EGDI-GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L++ LR ++ E L N++ C C++ + KK+ I + P +L + LKRF
Sbjct: 243 ASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFS 301
|
| >3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 3m99_A Length = 476 | Back alignment and structure |
|---|
Score = 231 bits (590), Expect = 9e-68
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 21/233 (9%)
Query: 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK--KDWCFTCELENLILRAK 642
GLIN G++C+ + +LQCL P + + +HS C D CF+C L+ ++
Sbjct: 141 LSGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELY 200
Query: 643 DG-------------KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE 689
I +L+ I L ++DAHEF ++ I+ + +
Sbjct: 201 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 260
Query: 690 EAGVNASGP---LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQ-ERMMDLTVEIEGDIG 745
+ + ++ F G L S I C C S+ + +DL+++I+
Sbjct: 261 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKD-KK 319
Query: 746 NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L E L + E L N Y C C S + A K+L I + P++L + LKRF+
Sbjct: 320 KLYECLDSFHKKEQLKDFN-YHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFE 371
|
| >2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 215 bits (548), Expect = 5e-63
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 43/256 (16%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFT-----CELENLILR 640
CGL N GN+C+ N LQCL+ T PLT YFL+ + E + + LI +
Sbjct: 9 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 68
Query: 641 AKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVC------------ 687
G+ + ++P +++ Q +++D+ E L + +D +
Sbjct: 69 MWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELK 128
Query: 688 -------IEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
A ++I TF G +S + C +C S + LT+ +
Sbjct: 129 DANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 188
Query: 741 EG------------------DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLT 782
L + + +T E L + + C CK +++A KK
Sbjct: 189 PLKKDRVMEGPMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFD 248
Query: 783 IVEAPNILTIALKRFQ 798
+ P IL + LKRF
Sbjct: 249 LWSLPKILVVHLKRFS 264
|
| >1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A Length = 353 | Back alignment and structure |
|---|
Score = 197 bits (501), Expect = 1e-56
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 16/219 (7%)
Query: 580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLIL 639
K GL N G +CY N +LQ L FT L + L+ +
Sbjct: 1 KKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDD--SSKSVPLALQRVFY 58
Query: 640 RAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPL 699
+ P+ + L + + D E R +D +++
Sbjct: 59 ELQHSDKPVGTKKLTKSFG--WETLDSFMQHDVQELCRVLLDNVENKMKG---------- 106
Query: 700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
I F G + S I+C + +S+R+E D+ + I+G N+ E+ Y E
Sbjct: 107 TCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGK-KNIFESFVDYVAVEQ 165
Query: 760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
LDG+NKY ++A+K + + P +L + L RF
Sbjct: 166 LDGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFM 203
|
| >2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} Length = 522 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 1e-55
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 17/234 (7%)
Query: 566 LFSYELFVKLYNWN-KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA 624
+F W+ K GL N G +CY N +LQ L FT L + +
Sbjct: 155 VFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDS 214
Query: 625 KKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQ 684
K L+ + + P+ + L + + D E R +D ++
Sbjct: 215 SK--SVPLALQRVFYELQHSDKPVGTKKLTKSFG--WETLDSFMQHDVQELCRVLLDNVE 270
Query: 685 SVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
+ I F G + S I+C + +S+R+E D+ + I+G
Sbjct: 271 NKMKG----------TCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGK- 319
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
N+ E+ Y E LDG+NKY ++A+K + + P +L + L RF
Sbjct: 320 KNIFESFVDYVAVEQLDGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFM 372
|
| >3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} PDB: 2y5b_A 3mtn_A Length = 355 | Back alignment and structure |
|---|
Score = 188 bits (478), Expect = 2e-53
Identities = 65/256 (25%), Positives = 99/256 (38%), Gaps = 43/256 (16%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDW--CFTCELENLI--LRA 641
GL N GN+C+ N VLQCL+ T PL + L+ +E T ++I L
Sbjct: 4 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH 63
Query: 642 KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI------------- 688
D ++P + Q ++DA EFL+ ++ +
Sbjct: 64 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 123
Query: 689 ---------------------EEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKS 727
+ A + LE E + I F G L+S +KC C +S
Sbjct: 124 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS 183
Query: 728 ERQERMMDLTVEIEGD-----IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLT 782
E DL++ I +L + +T E L+ EN CDRC+ ++ KKLT
Sbjct: 184 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT 243
Query: 783 IVEAPNILTIALKRFQ 798
+ P IL + L RF
Sbjct: 244 VQRFPRILVLHLNRFS 259
|
| >2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A Length = 404 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 6e-46
Identities = 51/233 (21%), Positives = 84/233 (36%), Gaps = 25/233 (10%)
Query: 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD---WCFTCELENLILRA 641
PCGL N GN+CY N +QC+ P L + + + + T L +L
Sbjct: 14 PCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSM 73
Query: 642 KDGKSPLSPIGILSRLQSIGSQ------LGNGREEDAHEFLRYAIDTMQ---------SV 686
S + PI +L L Q G ++DA+E + +Q SV
Sbjct: 74 DKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSV 133
Query: 687 CIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLT--VEIEGDI 744
++ ++ + +LI FG + +KCT+ + + + L I ++
Sbjct: 134 KETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEV 193
Query: 745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
L L+ EI + + K I P LTI + RF
Sbjct: 194 KYLFTGLKLRLQEEIT-----KQSPTLQRNALYIKSSKISRLPAYLTIQMVRF 241
|
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} Length = 854 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 2e-27
Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 45/256 (17%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE---CAKKDWCFTCELENLI---- 638
G+ N GNSCY N V+Q L P ++ L F+ ++ L
Sbjct: 345 TGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLL 404
Query: 639 -----------------LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
K+ + ++P + + + R++DA EF + I+
Sbjct: 405 SGEYSKPVPESGDGERVPEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLIN 464
Query: 682 TMQSVCIEEAGVNASGPLEDETTLIGLT------------------FGGYLRSKIKCTKC 723
++ C N E + L +K + +
Sbjct: 465 MVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEY 524
Query: 724 HGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTI 783
K + E E+ L Y E +D + ++ A K
Sbjct: 525 EEKKRQAEEEKMALPELVRAQVPFSSCLEAYGAPEQVD---DFWSTALQAKSVAVKTTRF 581
Query: 784 VEAPNILTIALKRFQV 799
P+ L I +K+F
Sbjct: 582 ASFPDYLVIQIKKFTF 597
|
| >1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9 Length = 415 | Back alignment and structure |
|---|
Score = 101 bits (251), Expect = 8e-23
Identities = 44/241 (18%), Positives = 73/241 (30%), Gaps = 43/241 (17%)
Query: 578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-------KKDWCF 630
+ P G N GN+CY N LQ L L L S+ + +
Sbjct: 17 VQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQI 76
Query: 631 TCELENLILRAKDGK-SPLSPIGILSRLQ-------SIGSQLGNGREEDAHEFLRYAIDT 682
E++ ++ + P+ +L+ L+ SQ G +++DA E +
Sbjct: 77 VIEMKRCFENLQNKSFKSVLPVVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHS 136
Query: 683 MQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHG--KSERQERMMDLTVEI 740
M V F ++ IK T + E L I
Sbjct: 137 MSIVF---------------GDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQCHI 181
Query: 741 EGDIGNLEEALRRYTGTEILDGENKY---KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
G + +L+G N+ + D + + I P LT+ RF
Sbjct: 182 SGTTNFMRN--------GLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRF 233
Query: 798 Q 798
Sbjct: 234 F 234
|
| >2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A Length = 70 | Back alignment and structure |
|---|
Score = 66.6 bits (162), Expect = 5e-14
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 59 ASYGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPS 116
+S P+ P+CA C + + RC+RC+ YC +CQ+ HW + H C +
Sbjct: 2 SSGSSGLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEK-HGKTCVLAA 58
|
| >2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 60 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 1e-13
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 70 PQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPS 116
C C + C+ C RYC CQ W + H C PS
Sbjct: 13 DSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEK-HHHICSGPS 58
|
| >2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens} Length = 64 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 3e-13
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 70 PQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
C C + C+ C RYC CQ W + H C + +
Sbjct: 15 DSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEK-HHHICGQTLQAQQ 64
|
| >2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens} Length = 60 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-13
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 70 PQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
C C + C+ C RYC CQ W + H C + +
Sbjct: 11 DSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEK-HHHICGQTLQAQQ 60
|
| >2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 52 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 8e-13
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 70 PQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPS 116
+ C C + C C V YCS CQ W+ H+ C +
Sbjct: 7 RKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKD-HQHICGQSA 52
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.6 bits (159), Expect = 5e-11
Identities = 97/633 (15%), Positives = 170/633 (26%), Gaps = 211/633 (33%)
Query: 229 NESEKLDGP-LSADITLDMLDNALNVKK-LEERKPL---SPKFAKL-VDSVDNFTKLNR- 281
E +++ L + I + ++ + +E+R L + FAK V + + KL +
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA 143
Query: 282 FCETKPGCS----GDLQCTPANSLGLGASHMNVNAERSTVSSS------FW---GR---- 324
E +P + G L G G + + ++ S FW
Sbjct: 144 LLELRPAKNVLIDGVL--------GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195
Query: 325 --TLEPKMDSCSDAALPDSNGASKSKLSDSRSSLLSSINESPSPSLPEKS-PKA-----N 376
LE D N S+S S + + SI L K N
Sbjct: 196 ETVLEMLQKLLYQI---DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 377 VFSPKIVHP-----AVLGNTRDTEGVVLMESTNMDAPEVKNSSSLNCKSSSHAVNGTKSG 431
V + K + +L TR K + +
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRF-------------------------KQVTDFL------ 281
Query: 432 SHVVKSGEVKSSVSLSSYGPPLSCVGRDSVCSNGLNISGGTSLRFEKSNIVTNDIGSSSN 491
S + +SL + L+ S+ L+ L E
Sbjct: 282 -----SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-DLPREVLTT---------- 325
Query: 492 FVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCL 551
P S+ +E + A +N WK V+ + + + L
Sbjct: 326 ---NPRRLSIIAESIRD------GLATWDN-------------WKHVNCDKLTTIIESSL 363
Query: 552 SV--GCETAGRYSDKGLF------SYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQC 603
+V E + +F L + W V ++
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI--WFDVIKSDVMVV-------------- 407
Query: 604 LAFTPPLTAYFLQGLHSKECAKKDWC-FTCELENLILRAKDGKSPLSPIGILSRL-QSIG 661
+ LH +K T + ++ L K + L +SI
Sbjct: 408 -----------VNKLHKYSLVEKQPKESTISIPSIYLELK------VKLENEYALHRSIV 450
Query: 662 SQLGNGREEDAHEFLRYAIDT---------MQSVCIEEAGVNASGPLEDETTLIGLTFGG 712
+ D+ + + +D +++ IE ++ L F
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN--IEHPE------RMTLFRMVFLDF-R 501
Query: 713 YLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCK 772
+L KI R G I N + L+ Y Y CD
Sbjct: 502 FLEQKI-------------RHDSTAWNASGSILNTLQQLKFY---------KPYICDNDP 539
Query: 773 SYE-----------KAKKKLTIVEAPNILTIAL 794
YE K ++ L + ++L IAL
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 3e-05
Identities = 42/332 (12%), Positives = 86/332 (25%), Gaps = 100/332 (30%)
Query: 507 DNVQRSSAMSAQIENSPSN-----VGNGLKTS---LWKAV-----DQFRGSKSSKQCLSV 553
D V + + + + V L+ + L + ++ +
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 554 GCETAGRYSDKGLFSYELFVKLYNWNKVELQP------CGLINCGNSCYANVVLQ----- 602
++ + + ++KL EL+P G++ G + A V
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALL-ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177
Query: 603 -CLAF-----------TPPLTAYFLQGLHSKECAKKDWCFTCE-LENLILRAKDGKSPLS 649
+ F +P LQ L + +W + N+ LR ++ L
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ--IDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 650 -------------------------------PIGILSRLQSIGSQLGNGR---------- 668
I + +R + + L
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 669 ----EEDAHEFLRYAIDT-MQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKC 723
++ L +D Q + E N P + + +R +
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTN---PR-----RLSI-IAESIRDGL----A 342
Query: 724 HGKSERQERMMDLTVEIEGDIGNLEEA-LRRY 754
+ + LT IE + LE A R+
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 96/617 (15%), Positives = 171/617 (27%), Gaps = 207/617 (33%)
Query: 33 RAVARKEEIKRLL---------------ILASEEAARAEF-----EASYGY--------- 63
+++ KEEI ++ +L+ +E +F +Y +
Sbjct: 43 KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102
Query: 64 -----STTVYVPQH------PQCAVCFSP-TTTRCARCKAVRYC---------------- 95
T +Y+ Q Q F+ +R +R
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQV---FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 96 -SGK-------CQIVHWRQGHKDECQPPSISHEINDVGNFTSQKAA-EPDQSEAYGDRFK 146
SGK C +K +C+ +N + N S + E Q Y +
Sbjct: 160 GSGKTWVALDVCL------SYKVQCKMDFKIFWLN-LKNCNSPETVLEMLQKLLY----Q 208
Query: 147 FESKLPAKPIQMSSEESESSD-RSSSSEVPQRKD--------DEVEVEFHADGEGASC-- 195
+ ++ S+ + ++ + + K V+ + SC
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI 268
Query: 196 ---TYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLSADITLDMLDNALN 252
T F SA+ T+ S D S L+ D +L L+
Sbjct: 269 LLTTRFKQVTDF--LSAATTTHISLDHHS--------------MTLTPDEVKSLLLKYLD 312
Query: 253 VK--KL-EERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCTPANSLGLGASHMN 309
+ L E +P S+ + R D T N H+N
Sbjct: 313 CRPQDLPREVLTTNP----RRLSI--IAESIR----------DGLATWDNWK-----HVN 351
Query: 310 VNAERSTVSSSFWGRTLEP----KM-DSCSDAALPDSNGASKSKLSDSRSSLL------- 357
+ + + SS LEP KM D + P S + + SL+
Sbjct: 352 CDKLTTIIESSL--NVLEPAEYRKMFDRL--SVFPPS-----AHIPTILLSLIWFDVIKS 402
Query: 358 ---SSINESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGVV-----LMESTNMDAPE 409
+N+ SL EK PK + S + L E +++ N+
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTIS---IPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 410 VKNSSSLNCKSS---SHAVNGTKSGSHVVKSGEVKSSVSLSS-Y-------------GPP 452
+ SH G H+ + +
Sbjct: 460 DSDDLIPPYLDQYFYSHI------GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 453 LSCVGRDSVCSNGLNISGGTSLRFEKSNIVTND------IGSSSNFVGMPSVPSVRSERF 506
+ G N L L+F K I ND + + +F+ + S+
Sbjct: 514 WNASGS---ILNTLQ-----QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT 565
Query: 507 DNVQRSSAMSAQIENSP 523
D ++ A+ A E+
Sbjct: 566 DLLRI--ALMA--EDEA 578
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 1e-05
Identities = 21/85 (24%), Positives = 25/85 (29%), Gaps = 13/85 (15%)
Query: 32 RRAVARKEEIKRLLILASEEAARAEFEASYGYSTTVYVPQHPQCAVCFSPTTT--RCARC 89
R A +L S A C CF+ +C RC
Sbjct: 19 RGLRA-LRPFHVGDLLFSCPAYACVLTVGERGHH---------CECCFARKEGLSKCGRC 68
Query: 90 KAVRYCSGKCQIVHWRQGHKDECQP 114
K YC +CQ W HK EC
Sbjct: 69 KQAFYCDVECQKEDWPL-HKLECSS 92
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 9e-05
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 72 HPQCAVCFSPTTT--RCARCKAVRYCSGKCQIVHWRQGHKDECQ 113
+ C CF RC +CK YC CQ W HK+EC
Sbjct: 49 NFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLN-HKNECA 91
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 807 | ||||
| d2gfoa1 | 348 | d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal h | 4e-32 | |
| d2hd5a1 | 336 | d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hy | 2e-30 | |
| d2ayna1 | 383 | d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hy | 3e-25 | |
| d1nbfa_ | 347 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 2e-24 | |
| d1vjva_ | 397 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 2e-23 | |
| d2dana1 | 47 | g.85.1.1 (A:8-54) Zinc finger MYND domain-containi | 6e-13 | |
| d2jw6a1 | 38 | g.85.1.1 (A:503-540) Zinc finger MYND domain-conta | 2e-11 | |
| d2dj8a1 | 47 | g.85.1.1 (A:8-54) Zinc finger MYND domain-containi | 4e-11 |
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 8 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 4e-32
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 26/239 (10%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDW-----CFTCELENLILR 640
GL N GN+CY N +LQCL P L YF + + + + + E ++
Sbjct: 16 TGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKA 75
Query: 641 AKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPL 699
G+ +SP + I Q ++D+ E L + +D + +
Sbjct: 76 LWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEE 135
Query: 700 ED-------------------ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
+ ++I F G +S ++C CH KS E M L++ +
Sbjct: 136 NNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPL 195
Query: 741 -EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L++ LR ++ E L N++ C C++ + KK+ I + P +L + LKRF
Sbjct: 196 ASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFS 254
|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 336 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 2, USP2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 2e-30
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 27/240 (11%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC---AKKDWCFTCELENLI--LR 640
GL N GN+C+ N +LQCL+ T L Y LQ L+ ++ + E LI +
Sbjct: 4 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 63
Query: 641 AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGP-- 698
+SP +++Q + ++DA EFLR+ +D + + S P
Sbjct: 64 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPEN 123
Query: 699 -----------------LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741
LE E + IG F G L+S + CT C S + DL++ I
Sbjct: 124 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 183
Query: 742 GDIG---NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L + +R +T ++LDG+ K C RC+ ++ KK +I P IL + LKRF
Sbjct: 184 KRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFS 243
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (264), Expect = 3e-25
Identities = 49/232 (21%), Positives = 78/232 (33%), Gaps = 21/232 (9%)
Query: 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQ---GLHSKECAKKDWCFTCELENLILRA 641
PCGL N GN+CY N +QC+ P L + L + T L +L
Sbjct: 4 PCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSM 63
Query: 642 KDGKSPLSPIGILSRLQSIGSQLGNGRE------EDAHEFLRYAIDTMQ---------SV 686
S + PI +L L Q E +DA+E + +Q SV
Sbjct: 64 DKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSV 123
Query: 687 CIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN 746
++ ++ + +LI FG + +KCT+ + + + L + +
Sbjct: 124 KETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEV 183
Query: 747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L E + + K I P LTI + RF
Sbjct: 184 KY---LFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFF 232
|
| >d1nbfa_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 2e-24
Identities = 48/213 (22%), Positives = 77/213 (36%), Gaps = 16/213 (7%)
Query: 586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK 645
GL N G +CY N +LQ L FT L E L+ + +
Sbjct: 7 VGLKNQGATCYMNSLLQTLFFTNQLRKAVYM--MPTEGDDSSKSVPLALQRVFYELQHSD 64
Query: 646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
P+ + L + + D E R +D +++ L
Sbjct: 65 KPVGTKKLTKSFGW--ETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKL------ 116
Query: 706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENK 765
F G + S I+C + +S+R+E D N+ E+ Y E LDG+NK
Sbjct: 117 ----FRGKMVSYIQCKEVDYRSDRREDYYD-IQLSIKGKKNIFESFVDYVAVEQLDGDNK 171
Query: 766 YKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
Y ++A+K + + P +L + L RF
Sbjct: 172 YDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFM 203
|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 397 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 101 bits (250), Expect = 2e-23
Identities = 44/231 (19%), Positives = 71/231 (30%), Gaps = 37/231 (16%)
Query: 585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC-------AKKDWCFTCELENL 637
P G N GN+CY N LQ L L L S+ + E++
Sbjct: 6 PVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRC 65
Query: 638 ILRAKDGK-SPLSPIGILSRLQSI-------GSQLGNGREEDAHEFLRYAIDTMQSVCIE 689
++ + P+ +L+ L+ SQ G +++DA E +M V
Sbjct: 66 FENLQNKSFKSVLPVVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVF-- 123
Query: 690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGK--SERQERMMDLTVEIEGDIGNL 747
F ++ IK T + E L I G +
Sbjct: 124 -------------GDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQCHISGTTNFM 170
Query: 748 EEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
L E L+ + + + D + + I P LT+ RF
Sbjct: 171 RNGLL-----EGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFF 216
|
| >d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 | Back information, alignment and structure |
|---|
class: Small proteins fold: HIT/MYND zinc finger-like superfamily: HIT/MYND zinc finger-like family: MYND zinc finger domain: Zinc finger MYND domain-containing protein 10, ZMYND10 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.6 bits (149), Expect = 6e-13
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 69 VPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDEC 112
P+ P+CA C + + RC+RC+ YC +CQ+ HW + H C
Sbjct: 5 APERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEK-HGKTC 47
|
| >d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 38 | Back information, alignment and structure |
|---|
class: Small proteins fold: HIT/MYND zinc finger-like superfamily: HIT/MYND zinc finger-like family: MYND zinc finger domain: Zinc finger MYND domain-containing protein 2, MTG8 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 2e-11
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 75 CAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDEC 112
C C + C C V YCS CQ W+ H+ C
Sbjct: 2 CVNCGREAMSECTGCHKVNYCSTFCQRKDWKD-HQHIC 38
|
| >d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 | Back information, alignment and structure |
|---|
class: Small proteins fold: HIT/MYND zinc finger-like superfamily: HIT/MYND zinc finger-like family: MYND zinc finger domain: Zinc finger MYND domain-containing protein 2, MTG8 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 4e-11
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 73 PQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDEC 112
C C + C+ C RYC CQ W + H C
Sbjct: 9 ESCWNCGRKASETCSGCNTARYCGSFCQHKDWEK-HHHIC 47
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1ejda_ | 419 | UDP-N-acetylglucosamine enolpyruvyl transferase (E | 100.0 | |
| d2df7a1 | 419 | Birnavirus VP2 {Infectious bursal disease virus [T | 100.0 | |
| d1om4a_ | 418 | Nitric oxide (NO) synthase oxygenase domain {Rat ( | 100.0 | |
| d2gp4a2 | 418 | 6-phosphogluconate dehydratase EDD {Shewanella one | 100.0 | |
| d1f61a_ | 418 | Isocitrate lyase {Mycobacterium tuberculosis [TaxI | 100.0 | |
| d2r5ea1 | 418 | Kynurenine--oxoglutarate transaminase I {Yellowfev | 100.0 | |
| d1w7la_ | 418 | Kynurenine--oxoglutarate transaminase I {Human (Ho | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 100.0 | |
| d3bona1 | 417 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d1w6ga1 | 417 | Copper amine oxidase, domain 3 {Arthrobacter globi | 100.0 | |
| d2csga1 | 417 | Hypothetical protein YbiU {Salmonella typhimurium | 100.0 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 100.0 | |
| d1ltka_ | 417 | Phosphoglycerate kinase {Malaria parasite (Plasmod | 100.0 | |
| d1gff1_ | 417 | Microvirus capsid proteins {Bacteriophage G4 [TaxI | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1q2oa_ | 416 | Nitric oxide (NO) synthase oxygenase domain {Cow ( | 100.0 | |
| d1dfoa_ | 416 | Serine hydroxymethyltransferase {Escherichia coli | 100.0 | |
| d1d8wa_ | 416 | L-rhamnose isomerase {Escherichia coli [TaxId: 562 | 100.0 | |
| d2vnud4 | 416 | Exosome complex exonuclease RRP44 {Saccharomyces c | 100.0 | |
| d1igwa_ | 416 | Isocitrate lyase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1pb1a_ | 416 | Isocitrate dehydrogenase, ICDH {Escherichia coli [ | 100.0 | |
| d1dnva_ | 415 | Densovirus capsid protein {Galleria mellonella den | 100.0 | |
| d2ieaa2 | 415 | Pyruvate dehydrogenase E1 component, PP module {Es | 100.0 | |
| d1so2a_ | 415 | cGMP-inhibited 3',5'-cyclic phosphodiesterase B, p | 100.0 | |
| d16pka_ | 415 | Phosphoglycerate kinase {Trypanosoma brucei [TaxId | 100.0 | |
| d1qpga_ | 415 | Phosphoglycerate kinase {Baker's yeast (Saccharomy | 100.0 | |
| d2qeec1 | 415 | Uncharacterized protein BH0493 {Bacillus haloduran | 100.0 | |
| d1s5ja2 | 415 | Family B DNA polymerase {Sulfolobus solfataricus [ | 100.0 | |
| d1kbia1 | 414 | Flavocytochrome b2, C-terminal domain {Baker's yea | 100.0 | |
| d2b8na1 | 414 | Putative glycerate kinase (hypothetical protein TM | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1t0la_ | 414 | NADP-dependent isocitrate dehydrogenase {Human (Ho | 100.0 | |
| d1vh4a_ | 413 | Stabilizer of iron transporter SufD {Escherichia c | 100.0 | |
| d1t5la1 | 413 | Nucleotide excision repair enzyme UvrB {Bacillus c | 100.0 | |
| d1hdia_ | 413 | Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: | 100.0 | |
| d1zjca1 | 413 | Aminopeptidase S, AMPS {Staphylococcus aureus [Tax | 100.0 | |
| d2qgma1 | 413 | Succinoglycan biosynthesis protein BC3205 {Bacillu | 100.0 | |
| d1lwda_ | 413 | NADP-dependent isocitrate dehydrogenase {Pig (Sus | 100.0 | |
| d1a0tp_ | 413 | Sucrose-specific porin {Enterobacterium (Salmonell | 100.0 | |
| d1ulva1 | 413 | Glucodextranase, domain A {Arthrobacter globiformi | 100.0 | |
| d1yzya1 | 412 | Hypothetical protein HI1011 {Haemophilus influenza | 100.0 | |
| d1ocka_ | 412 | Malonamidase E2 {Bradyrhizobium japonicum [TaxId: | 100.0 | |
| d1yaaa_ | 412 | Aspartate aminotransferase, AAT {Baker's yeast (Sa | 100.0 | |
| d1rxxa_ | 412 | Arginine deiminase {Pseudomonas aeruginosa [TaxId: | 100.0 | |
| d1bw0a_ | 412 | Tyrosine aminotransferase (TAT) {Trypanosoma cruzi | 100.0 | |
| d1ajsa_ | 412 | Aspartate aminotransferase, AAT {Pig (Sus scrofa), | 100.0 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 100.0 | |
| d1t3ca_ | 411 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1izoa_ | 411 | Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1p1ja1 | 410 | Myo-inositol 1-phosphate synthase {Baker's yeast ( | 100.0 | |
| d1kfsa2 | 410 | DNA polymerase I (Klenow fragment) {Escherichia co | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d1s5ja1 | 410 | Exonuclease domain of family B DNA polymerases {Su | 100.0 | |
| d2cmza1 | 409 | Spike glycoprotein {Vesicular stomatitis indiana v | 100.0 | |
| d1tv5a1 | 409 | Dihydroorotate dehydrogenase {Plasmodium falciparu | 100.0 | |
| d1qtma2 | 409 | DNA polymerase I (Klenow fragment) {Thermus aquati | 100.0 | |
| d2g0da1 | 409 | Nisin biosynthesis protein NisC {Lactococcus lacti | 100.0 | |
| d1s9ra_ | 409 | Arginine deiminase {Mycoplasma arginini [TaxId: 20 | 100.0 | |
| d1b25a1 | 409 | Formaldehyde ferredoxin oxidoreductase {Archaeon P | 100.0 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 100.0 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1r76a_ | 408 | Polygalacturonic acid lyase (pectate lyase) {Azosp | 100.0 | |
| d1f1oa_ | 408 | Adenylosuccinate lyase {Bacillus subtilis [TaxId: | 100.0 | |
| d1c4oa1 | 408 | Nucleotide excision repair enzyme UvrB {Thermus th | 100.0 | |
| d2hhva2 | 408 | DNA polymerase I (Klenow fragment) {Bacillus stear | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t3ia_ | 408 | Probable cysteine desulfurase SufS {Synechocystis | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1qs0a_ | 407 | 2-oxoisovalerate dehydrogenase (E1B), PP module {P | 100.0 | |
| d1eu8a_ | 407 | D-maltodextrin-binding protein, MBP {Archaeon Ther | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d1ei6a_ | 406 | Phosphonoacetate hydrolase {Pseudomonas fluorescen | 100.0 | |
| d2ayia1 | 406 | Aminopeptidase T {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d1kl1a_ | 405 | Serine hydroxymethyltransferase {Bacillus stearoth | 100.0 | |
| d2nwwa1 | 405 | Proton glutamate symport protein {Pyrococcus horik | 100.0 | |
| d1h6za3 | 405 | Pyruvate phosphate dikinase, N-terminal domain {Tr | 100.0 | |
| d1jf9a_ | 405 | NifS-like protein/selenocysteine lyase {Escherichi | 100.0 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 100.0 | |
| d1qz9a_ | 404 | Kynureninase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1re9a_ | 404 | Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 | 100.0 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 100.0 | |
| d1z7da1 | 404 | Ornithine aminotransferase {Plasmodium yoelii yoel | 100.0 | |
| d2byla1 | 404 | Ornithine aminotransferase {Human (Homo sapiens) [ | 100.0 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 100.0 | |
| d1h12a_ | 404 | Endo-1,4-beta-xylanase {Pseudoalteromonas haloplan | 100.0 | |
| d1wsta1 | 403 | Multiple substrate aminotransferase, MSAT {Thermoc | 100.0 | |
| d1ueda_ | 403 | p450 monoxygenase OxyC {Amycolatopsis orientalis [ | 100.0 | |
| d1xksa_ | 403 | Nuclear pore complex protein Nup133 {Human (Homo s | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d3b55a1 | 403 | Succinoglycan biosynthesis protein BC3120 {Bacillu | 100.0 | |
| d1gwia_ | 403 | Cyp154c1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1dofa_ | 402 | Adenylosuccinate lyase {Archaeon Pyrobaculum aerop | 100.0 | |
| d2g5da1 | 402 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 100.0 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 100.0 | |
| g1w2w.1 | 402 | Putative methylthioribose-1-phosphate isomerase Yp | 100.0 | |
| d1z8oa1 | 402 | Cytochrome P450-ERYF {Saccharopolyspora erythraea | 100.0 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 100.0 | |
| d1fc4a_ | 401 | 2-amino-3-ketobutyrate CoA ligase {Escherichia col | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1q5da_ | 401 | Cytochrome P450epok {Sorangium cellulosum [TaxId: | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d2h6fb1 | 401 | Protein farnesyltransferase, beta-subunit {Human ( | 100.0 | |
| d1jdpa_ | 401 | Hormone binding domain of the atrial natriuretic p | 100.0 | |
| d7aata_ | 401 | Aspartate aminotransferase, AAT {Chicken (Gallus g | 100.0 | |
| d2r7da2 | 401 | Ribonuclease II family protein DR0020 {Deinococcus | 100.0 | |
| d1odoa_ | 401 | Cyp154a1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1tq4a_ | 400 | Interferon-inducible GTPase {Mouse (Mus musculus) | 100.0 | |
| d1ru4a_ | 400 | Pectate transeliminase {Erwinia chrysanthemi [TaxI | 100.0 | |
| d3ovwa_ | 400 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1inpa_ | 400 | Inositol polyphosphate 1-phosphatase {Cow (Bos tau | 100.0 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1oyaa_ | 399 | Old yellow enzyme (OYE) {Lager yeast (Saccharomyce | 100.0 | |
| d1jfba_ | 399 | Cytochrome P450-NOR, nitric reductase {Fungus (Fus | 100.0 | |
| d1s1fa_ | 399 | Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | 100.0 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 100.0 | |
| d1bn8a_ | 399 | Pectate lyase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d1ojja_ | 399 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1vpea_ | 398 | Phosphoglycerate kinase {Thermotoga maritima [TaxI | 100.0 | |
| d1qgna_ | 398 | Cystathionine gamma-synthase, CGS {Common tobacco | 100.0 | |
| d1vlja_ | 398 | NADH-dependent butanol dehydrogenase A (TM0820) {T | 100.0 | |
| d1y4ia1 | 397 | Methionine gamma-lyase, MGL {Citrobacter freundii | 100.0 | |
| d1q1la_ | 397 | Chorismate synthase, AroC {Aquifex aeolicus [TaxId | 100.0 | |
| d1vkoa1 | 397 | Myo-inositol 1-phosphate synthase {Caenorhabditis | 100.0 | |
| d3tata_ | 397 | Aromatic aminoacid aminotransferase, AroAT {Escher | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d1lf6a1 | 397 | Bacterial glucoamylase, C-terminal domain {Thermoa | 100.0 | |
| d2bwna1 | 396 | 5-aminolevulinate synthase {Rhodobacter capsulatus | 100.0 | |
| d2q7wa1 | 396 | Aspartate aminotransferase, AAT {Escherichia coli | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d1io1a_ | 395 | Phase 1 flagellin {Salmonella typhimurium [TaxId: | 100.0 | |
| g1f8v.1 | 395 | Alphanodavirus capsid protein {Pariacoto virus [Ta | 100.0 | |
| d2bfda1 | 395 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 100.0 | |
| d1aora1 | 395 | Aldehyde ferredoxin oxidoreductase {Archaeon Pyroc | 100.0 | |
| d1w36b2 | 395 | Exodeoxyribonuclease V beta chain (RecB), N-termin | 100.0 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 100.0 | |
| d1xi9a_ | 395 | Putative alanine aminotransferase {Pyrococcus furi | 100.0 | |
| d1n40a_ | 395 | Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub | 100.0 | |
| d1phpa_ | 394 | Phosphoglycerate kinase {Bacillus stearothermophil | 100.0 | |
| d1e5ea_ | 394 | Methionine gamma-lyase, MGL {Trichomonas vaginalis | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1u1ha1 | 394 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d2ay1a_ | 394 | Aromatic aminoacid aminotransferase, AroAT {Paraco | 100.0 | |
| d1lfka_ | 394 | p450 monoxygenase OxyB {Amycolatopsis orientalis [ | 100.0 | |
| d1c7na_ | 394 | Cystalysin {Treponema denticola [TaxId: 158]} | 100.0 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 100.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1q8ia2 | 394 | Family B DNA polymerase {Escherichia coli [TaxId: | 100.0 | |
| d1ldja2 | 394 | Cullin homolog 1, Cul-1 {Human (Homo sapiens) [Tax | 100.0 | |
| d1n8pa_ | 393 | Cystathionine gamma-lyase (CYS3) {Baker's yeast (S | 100.0 | |
| d1xlma_ | 393 | D-xylose isomerase {Arthrobacter, strain b3728 [Ta | 100.0 | |
| d1g8ma2 | 393 | AICAR transformylase domain of bifunctional purine | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d1gc0a_ | 392 | Methionine gamma-lyase, MGL {Pseudomonas putida [T | 100.0 | |
| d2d0ta1 | 392 | Indoleamine 2,3-dioxygenase {Human (Homo sapiens) | 100.0 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 100.0 | |
| d1xima_ | 392 | D-xylose isomerase {Actinoplanes missouriensis [Ta | 100.0 | |
| d1yvua2 | 392 | Argonaute homologue Aq_1447 {Aquifex aeolicus [Tax | 100.0 | |
| d1cl1a_ | 391 | Cystathionine beta-lyase, CBL {Escherichia coli [T | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 100.0 | |
| d1p3wa_ | 391 | Cysteine desulfurase IscS {Escherichia coli [TaxId | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 100.0 | |
| d1v6sa_ | 390 | Phosphoglycerate kinase {Thermus thermophilus [Tax | 100.0 | |
| d1nsca_ | 390 | Influenza neuraminidase {Influenza B virus, differ | 100.0 | |
| d1qopb_ | 390 | Tryptophan synthase, beta-subunit {Salmonella typh | 100.0 | |
| d1oj7a_ | 390 | Hypothetical oxidoreductase yqhD {Escherichia coli | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 100.0 | |
| d1sg6a_ | 389 | Dehydroquinate synthase, DHQS {Aspergillus nidulan | 100.0 | |
| d2gb3a1 | 389 | AAT homologue TM1698 {Thermotoga maritima [TaxId: | 100.0 | |
| d1jiha2 | 389 | DNA polymerase eta {Baker's yeast (Saccharomyces c | 100.0 | |
| d2o3ia1 | 389 | Hypothetical protein CV3147 {Chromobacterium viola | 100.0 | |
| d1f8ea_ | 388 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1u7la_ | 388 | Vacuolar ATP synthase subunit C {Baker's yeast (Sa | 100.0 | |
| d1qxoa_ | 388 | Chorismate synthase, AroC {Streptococcus pneumonia | 100.0 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 100.0 | |
| d2ch1a1 | 388 | 3-hydroxykynurenine transaminase {Malaria mosquito | 100.0 | |
| d1eepa_ | 388 | Inosine monophosphate dehydrogenase (IMPDH) {Lyme | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d2py5a2 | 388 | phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: | 100.0 | |
| d1gdea_ | 388 | Aromatic aminoacid aminotransferase, AroAT {Archae | 100.0 | |
| d1q8ia1 | 388 | Exonuclease domain of family B DNA polymerases {Es | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1h0ca_ | 388 | Alanine-glyoxylate aminotransferase {Human (Homo s | 100.0 | |
| d1j32a_ | 388 | Aspartate aminotransferase, AAT {Phormidium lapide | 100.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 100.0 | |
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1zeea1 | 387 | Hypothetical protein SO4414 {Shewanella oneidensis | 100.0 | |
| d2aepa1 | 387 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 100.0 | |
| d2ex0a1 | 387 | Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteur | 100.0 | |
| d1zsqa2 | 387 | Myotubularin-related protein 2, C-terminal domain | 100.0 | |
| d1vefa1 | 387 | Acetylornithine/acetyl-lysine aminotransferase Arg | 100.0 | |
| d1bxba_ | 387 | D-xylose isomerase {Thermus aquaticus, subsp. Ther | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 100.0 | |
| d1r6ta2 | 386 | Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo | 100.0 | |
| d1v8za1 | 386 | Tryptophan synthase, beta-subunit {Archaeon Pyroco | 100.0 | |
| d1muwa_ | 386 | D-xylose isomerase {Streptomyces olivochromogenes | 100.0 | |
| d3c10a1 | 386 | Histone deacetylase 7, HDAC7 {Human (Homo sapiens) | 100.0 | |
| d1v5da_ | 386 | Chitosanase {Bacillus sp., strain k17 [TaxId: 1409 | 100.0 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 100.0 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 100.0 | |
| d1xmxa_ | 385 | Hypothetical protein VC1899 {Vibrio cholerae [TaxI | 100.0 | |
| d1ir6a_ | 385 | Exonuclease RecJ {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1uhga_ | 385 | Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d2c5wb1 | 385 | Penicillin-binding protein 1a, transpeptidase doma | 100.0 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 100.0 | |
| d1n97a_ | 385 | Cyp175a1 {Thermus thermophilus [TaxId: 274]} | 100.0 | |
| d2ix0a4 | 385 | Exoribonuclease 2, RNB {Escherichia coli [TaxId: 5 | 100.0 | |
| d1cs1a_ | 384 | Cystathionine gamma-synthase, CGS {Escherichia col | 100.0 | |
| d3c0na2 | 384 | (Pro)aerolysin, pore-forming lobe {Aeromonas hydro | 100.0 | |
| d1mtyb_ | 384 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1b9ha_ | 384 | 3-amino-5-hydroxybenzoic acid synthase (AHBA synth | 100.0 | |
| d1hn0a1 | 384 | Chondroitin ABC lyase I {Proteus vulgaris [TaxId: | 100.0 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d1vz6a_ | 383 | Glutamate N-acetyltransferase 2 (ornithine acetylt | 100.0 | |
| d1mhyb_ | 383 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1u7ga_ | 383 | Ammonium transporter AmtB {Escherichia coli [TaxId | 100.0 | |
| d1bs0a_ | 383 | PLP-dependent acyl-CoA synthase (8-amino-7-oxonano | 100.0 | |
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1imva_ | 383 | Pigment epithelium-derived factor, PEDF {Human (Ho | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d1u08a_ | 382 | Putative methionine aminotransferase YdbL {Escheri | 100.0 | |
| d1b5pa_ | 382 | Aspartate aminotransferase, AAT {Thermus thermophi | 100.0 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d2bkwa1 | 382 | Alanine-glyoxylate aminotransferase {Baker's yeast | 100.0 | |
| d1t1ua1 | 382 | Choline O-acetyltransferase {Rat (Rattus norvegicu | 100.0 | |
| d1xl7a1 | 382 | Peroxisomal carnitine O-octanoyltransferase, COT { | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d1by7a_ | 381 | Plasminogen activator inhibitor-2 {Human (Homo sap | 100.0 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 100.0 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 100.0 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 100.0 | |
| d1elua_ | 381 | Cystine C-S lyase C-des {Synechocystis sp. [TaxId: | 100.0 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1ibja_ | 380 | Cystathionine beta-lyase, CBL {Thale cress (Arabid | 100.0 | |
| d1vbga3 | 380 | Pyruvate phosphate dikinase, N-terminal domain {Ma | 100.0 | |
| d1q45a_ | 380 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 100.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1elja_ | 380 | D-maltodextrin-binding protein, MBP {Archaeon Pyro | 100.0 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 100.0 | |
| d1lj5a_ | 379 | Plasminogen activator inhibitor-1 {Human (Homo sap | 100.0 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 100.0 | |
| d1jr1a1 | 378 | Inosine monophosphate dehydrogenase (IMPDH) {Chine | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1xqga_ | 378 | Maspin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 100.0 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 100.0 | |
| d1vjoa_ | 377 | Alanine-glyoxylate aminotransferase {Cyanobacteria | 100.0 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d2i71a1 | 377 | Hypothetical protein SSO1389 {Sulfolobus solfatari | 100.0 | |
| d1jmma_ | 377 | V-region of surface antigen I/II (SA I/II, PAC) {S | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d1nm8a1 | 377 | Carnitine acetyltransferase {Human (Homo sapiens) | 100.0 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 100.0 | |
| d1mdoa_ | 376 | Aminotransferase ArnB {Salmonella typhimurium [Tax | 100.0 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 100.0 | |
| d1k9oi_ | 376 | Alaserpin (serpin 1) {Tobacco hornworm (Manduca se | 100.0 | |
| d1eg5a_ | 376 | NifS-like protein/selenocysteine lyase {Thermotoga | 100.0 | |
| d2v3qa1 | 376 | PstS-like phosphate-binding protein {Human (Homo s | 100.0 | |
| d1wu4a1 | 376 | Xylanase Y {Bacillus halodurans [TaxId: 86665]} | 100.0 | |
| d1bhea_ | 376 | Polygalacturonase {Erwinia carotovora, subsp. caro | 100.0 | |
| d2fug41 | 375 | NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus | 100.0 | |
| d1o4sa_ | 375 | Aspartate aminotransferase, AAT {Thermotoga mariti | 100.0 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 100.0 | |
| d1ih7a1 | 375 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| g1hle.1 | 375 | Elastase inhibitor {Horse (Equus caballus) [TaxId: | 100.0 | |
| d1kbla3 | 375 | Pyruvate phosphate dikinase, N-terminal domain {Cl | 100.0 | |
| d1txka2 | 374 | Glucans biosynthesis protein G (MdoG, OpgG), N-ter | 100.0 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d2a0ua1 | 374 | Initiation factor 2b {Leishmania major [TaxId: 566 | 100.0 | |
| d1o69a_ | 374 | Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam | 100.0 | |
| d1nd7a_ | 374 | WW domain-containing protein 1, WWP1 {Human (Homo | 100.0 | |
| d1gwja_ | 374 | Morphinone reductase {Pseudomonas putida [TaxId: 3 | 100.0 | |
| d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacte | 100.0 | |
| d1rp4a_ | 374 | Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast | 100.0 | |
| d1so7a_ | 374 | Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 100.0 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 100.0 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 100.0 | |
| d1qo0a_ | 373 | Amide receptor/negative regulator of the amidase o | 100.0 | |
| d1ogmx2 | 373 | Dextranase, catalytic domain {Penicillium miniolut | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1m0wa2 | 373 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d1r5ya_ | 372 | Queosine tRNA-guanine transglycosylase {Zymomonas | 100.0 | |
| d1c3pa_ | 372 | HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | 100.0 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 100.0 | |
| d1noya_ | 372 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1qlpa_ | 372 | Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vkpa_ | 372 | Agmatine iminohydrolase {Thale-cress (Arabidopsis | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1mkfa_ | 371 | Viral chemokine binding protein m3 {Murid herpesvi | 100.0 | |
| d1r53a_ | 371 | Chorismate synthase, AroC {Baker's yeast (Saccharo | 100.0 | |
| d1to6a_ | 371 | Glycerate kinase GlxK {Neisseria meningitidis, (se | 100.0 | |
| d1c8ba_ | 371 | Germination protease {Bacillus megaterium [TaxId: | 100.0 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1n7oa1 | 371 | Hyaluronate lyase {Streptococcus pneumoniae [TaxId | 100.0 | |
| d1f1sa1 | 371 | Hyaluronate lyase {Streptococcus agalactiae [TaxId | 100.0 | |
| d1eg1a_ | 371 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2fnua1 | 371 | Spore coat polysaccharide biosynthesis protein C { | 100.0 | |
| d2dexx3 | 370 | Peptidylarginine deiminase Pad4, catalytic C-termi | 100.0 | |
| d2gx8a1 | 370 | Nif3-related protein BC4286 {Bacillus cereus [TaxI | 100.0 | |
| d2hgsa4 | 370 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d1itua_ | 369 | Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d1rwha1 | 369 | Chondroitinase AC {Arthrobacter aurescens [TaxId: | 100.0 | |
| d2ewoa1 | 369 | Agmatine iminohydrolase {Streptococcus mutans [Tax | 100.0 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 100.0 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 100.0 | |
| d2heka1 | 369 | Hypothetical protein aq_1910 {Aquifex aeolicus [Ta | 100.0 | |
| g1as4.1 | 369 | Antichymotrypsin, alpha-1 {Human (Homo sapiens) [T | 100.0 | |
| d1laxa_ | 369 | D-maltodextrin-binding protein, MBP {Escherichia c | 100.0 | |
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d2cu0a1 | 368 | Inosine monophosphate dehydrogenase (IMPDH) {Pyroc | 100.0 | |
| d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [T | 100.0 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonell | 100.0 | |
| d1v2da_ | 368 | Glutamine aminotransferase {Thermus thermophilus [ | 100.0 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 100.0 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 100.0 | |
| d1d3ga_ | 367 | Dihydroorotate dehydrogenase {Human (Homo sapiens) | 100.0 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 100.0 | |
| d1b65a_ | 367 | L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochr | 100.0 | |
| d1ue8a_ | 367 | Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 100.0 | |
| d1ursa_ | 367 | D-maltodextrin-binding protein, MBP {Alicyclobacil | 100.0 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 100.0 | |
| d1moqa_ | 366 | "Isomerase domain" of glucosamine 6-phosphate synt | 100.0 | |
| d1io7a_ | 366 | Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 | 100.0 | |
| d1h6za1 | 366 | Pyruvate phosphate dikinase, C-terminal domain {Tr | 100.0 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 100.0 | |
| d1u5ua_ | 366 | Allene oxide synthase-lipoxygenase protein, N-term | 100.0 | |
| d1jq5a_ | 366 | Glycerol dehydrogenase {Bacillus stearothermophilu | 100.0 | |
| d2aeua1 | 366 | Hypothetical protein MJ0158 {Archaeon Methanococcu | 100.0 | |
| d1fn9a_ | 365 | Outer capsid protein sigma 3 {Reovirus [TaxId: 108 | 100.0 | |
| d1um0a_ | 365 | Chorismate synthase, AroC {Helicobacter pylori [Ta | 100.0 | |
| d2pnwa1 | 365 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1zkda1 | 365 | Hypothetical protein RPA4359 {Rhodopseudomonas pal | 100.0 | |
| d1u1ha2 | 365 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1w85a_ | 365 | Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st | 100.0 | |
| d1zfja1 | 365 | Inosine monophosphate dehydrogenase (IMPDH) {Strep | 100.0 | |
| d3c8ya1 | 365 | Fe-only hydrogenase, catalytic domain {Clostridium | 100.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 100.0 | |
| d1t64a_ | 364 | Histone deacetylase 8, HDAC8 {Human (Homo sapiens) | 100.0 | |
| d2jera1 | 364 | Agmatine iminohydrolase {Enterococcus faecalis [Ta | 100.0 | |
| d1icpa_ | 364 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 100.0 | |
| d1kbla1 | 364 | Pyruvate phosphate dikinase, C-terminal domain {Cl | 100.0 | |
| d1kq3a_ | 364 | Glycerol dehydrogenase {Thermotoga maritima [TaxId | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 100.0 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 100.0 | |
| d1oc7a_ | 364 | Cellobiohydrolase II (Cel6) {Humicola insolens, Ce | 100.0 | |
| d2e7ja1 | 364 | Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl | 100.0 | |
| d1m7va_ | 363 | Nitric oxide (NO) synthase oxygenase domain {Bacil | 100.0 | |
| d1zaia1 | 363 | Fructose-1,6-bisphosphate aldolase {Rabbit (Orycto | 100.0 | |
| d1khba1 | 363 | Cytosolic phosphoenolpyruvate carboxykinase (GTP-h | 100.0 | |
| d1zq1a2 | 363 | Glutamyl-tRNA(Gln) amidotransferase subunit D, Gat | 100.0 | |
| d1vyra_ | 363 | Pentaerythritol tetranirate reductase {Enterobacte | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1cnza_ | 363 | 3-isopropylmalate dehydrogenase, IPMDH {Salmonella | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 100.0 | |
| d1kwfa_ | 363 | CelA cellulase {Clostridium thermocellum [TaxId: 1 | 100.0 | |
| d2a1ha1 | 363 | Branched-chain aminoacid aminotransferase {Human ( | 100.0 | |
| d1umga_ | 362 | ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1gqea_ | 362 | Polypeptide chain release factor 2 (RF2) {Escheric | 100.0 | |
| d1umda_ | 362 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 100.0 | |
| d1nqka_ | 362 | Alkanesulfonate monooxygenase SsuD {Escherichia co | 100.0 | |
| d1vlca_ | 362 | 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga | 100.0 | |
| d3thia_ | 362 | Thiaminase I {Paenibacillus thiaminolyticus [TaxId | 100.0 | |
| d1pvna1 | 362 | Inosine monophosphate dehydrogenase (IMPDH) {Tritr | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 100.0 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 100.0 | |
| d1qjwa_ | 362 | Cellobiohydrolase II (Cel6) {Trichoderma reesei, C | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d2ozla1 | 361 | E1-beta subunit of pyruvate dehydrogenase (PP modu | 100.0 | |
| d1dhsa_ | 361 | Deoxyhypusine synthase, DHS {Human (Homo sapiens) | 100.0 | |
| d1x1ia1 | 361 | Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | 100.0 | |
| d1m32a_ | 361 | 2-aminoethylphosphonate transaminase {Salmonella t | 100.0 | |
| d2c0ra1 | 361 | Phosphoserine aminotransferase, PSAT {Bacillus cir | 100.0 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 100.0 | |
| d1lt7a_ | 361 | Betaine-homocysteine S-methyltransferase {Human (H | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1d2fa_ | 361 | Modulator in mal gene expression, MalY {Escherichi | 100.0 | |
| d1pe9a_ | 361 | Pectate lyase {Erwinia chrysanthemi, type A [TaxId | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d1qo5a_ | 360 | Fructose-1,6-bisphosphate aldolase {Human (Homo sa | 100.0 | |
| d1sq1a_ | 360 | Chorismate synthase, AroC {Campylobacter jejuni [T | 100.0 | |
| d1w23a_ | 360 | Phosphoserine aminotransferase, PSAT {Bacillus alc | 100.0 | |
| d1jdwa_ | 360 | L-arginine: glycine amidinotransferase {Human (Hom | 100.0 | |
| d1bjna_ | 360 | Phosphoserine aminotransferase, PSAT {Escherichia | 100.0 | |
| d1xfia_ | 360 | Hypothetical protein At2g17340 {Thale cress (Arabi | 100.0 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 100.0 | |
| d1oxwa_ | 360 | Patatin {Heartleaf nightshade (Solanum cardiophyll | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d4bcla_ | 359 | Bacteriochlorophyll A protein {Prosthecochloris ae | 100.0 | |
| d1goxa_ | 359 | Glycolate oxidase {Spinach (Spinacia oleracea) [Ta | 100.0 | |
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1yvra1 | 359 | 60-kda SS-aARo ribonucleoprotein {African clawed f | 100.0 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 100.0 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 100.0 | |
| d1idka_ | 359 | Pectin lyase {Aspergillus niger, type A [TaxId: 50 | 100.0 | |
| d1qcxa_ | 359 | Pectin lyase {Aspergillus niger, type B [TaxId: 50 | 100.0 | |
| d1o2da_ | 359 | Alcohol dehydrogenase TM0920 {Thermotoga maritima | 100.0 | |
| g1lq8.1 | 358 | Protein C inhibitor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1dosa_ | 358 | Fructose-bisphosphate aldolase (FBP aldolase) {Esc | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 100.0 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 100.0 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d1taza_ | 357 | Catalytic domain of cyclic nucleotide phosphodiest | 100.0 | |
| d2qapa1 | 357 | Fructose-1,6-bisphosphate aldolase {Trypanosome (L | 100.0 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 100.0 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 100.0 | |
| d1a05a_ | 357 | 3-isopropylmalate dehydrogenase, IPMDH {Thiobacill | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d16vpa_ | 356 | Conserved core of transcriptional regulatory prote | 100.0 | |
| d1r3sa_ | 356 | Uroporphyrinogen decarboxylase, UROD {Human (Homo | 100.0 | |
| d2ebsa2 | 356 | Oligoxyloglucan reducing end-specific cellobiohydr | 100.0 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 100.0 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 100.0 | |
| d1v53a1 | 356 | 3-isopropylmalate dehydrogenase, IPMDH {Bacillus c | 100.0 | |
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 100.0 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 100.0 | |
| d1vbga1 | 356 | Pyruvate phosphate dikinase, C-terminal domain {Ma | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 100.0 | |
| d1fuia2 | 355 | L-fucose isomerase, N-terminal and second domains | 100.0 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 100.0 | |
| d1luca_ | 355 | Bacterial luciferase alpha chain, LuxA {Vibrio har | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| g1mtp.1 | 355 | Thermopin {Thermobifida fusca [TaxId: 2021]} | 100.0 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1iq8a1 | 355 | Archaeosine tRNA-guanine transglycosylase, N-termi | 100.0 |
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=31727.37 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~w~~~~~~~~~~~~~viYe~~~~~f~~~Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G 80 (420)
T d2bhua3 1 TFDWTDADWHGIKLADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYG 80 (420)
T ss_dssp SSCCCCTTCCCCCGGGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 96899989798884224899996002188999999998679999769998995998768888998888566888685659
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVD 160 (420)
T d2bhua3 81 RPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD 160 (420)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC
T ss_conf 99999999999974054534465535667777633334443334554322345545368699999988764032014653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 GfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
T d2bhua3 161 GLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTDDFHHETRVTLTGEQEGYYAGYR 240 (420)
T ss_dssp EEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCCTHHHHTTCCSEEECTHHHHHHHHHHHCCCSGGGGGCC
T ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 78873333202122310079998888764687425620357753121001125422323210444301334445312330
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~nHD~~~~~~~~~r~~~~~~~~~~~~k~a~~~ll 320 (420)
T d2bhua3 241 GGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHEYRGAAALLL 320 (420)
T ss_dssp CSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTSTTCCCGGGSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHCHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 26678999985144446520443153554126433455213034321566323553112356643565999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 t~pG~P~iy~GdEig~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 400 (420)
T d2bhua3 321 TLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPDPQAEQTFLNSKLNWAEREGGEHART 400 (420)
T ss_dssp HSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCCTTSHHHHHTTSCCSGGGGSHHHHHH
T ss_pred HCCCCCEEECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
T ss_conf 48998798577511789986323456402203544466311367776665557886555544456678788623476899
Q ss_pred -------------------C
Q ss_conf -------------------9
Q 003615 112 -------------------C 112 (807)
Q Consensus 112 -------------------C 112 (807)
-
T Consensus 401 ~~~yr~Li~lRk~~p~l~~~ 420 (420)
T d2bhua3 401 LRLYRDLLRLRREDPVLHNR 420 (420)
T ss_dssp HHHHHHHHHHHHHCTTTTCC
T ss_pred HHHHHHHHHHHHCCHHHHCC
T ss_conf 99999999999568987575
|
| >d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: EPT/RTPC-like family: Enolpyruvate transferase, EPT domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=31656.74 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~s~D~~~~~~al~~LG~~I~~~~~~~I~~~~~~~~ 80 (419)
T d1ejda_ 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERDGSVWIDASNVNNF 80 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESSSEEEECTTCCCC
T ss_pred CCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC
T ss_conf 98699948890477997888389999999999984998999259901999999999997799899898799989997777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~~~~g~~~~~i~g~l~g~~~~~~~ 160 (419)
T d1ejda_ 81 SAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDK 160 (419)
T ss_dssp EECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTEEEEECSSSCBCCEEECSS
T ss_pred CCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCEEECCC
T ss_conf 66554540354320024425665277524666643457774267889998536169962892445337886674674587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Ssq~~s~llla~~~~~g~~~i~~~~~~~~i~~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~ 240 (419)
T d1ejda_ 161 VSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLV 240 (419)
T ss_dssp CCHHHHHHHHHHHTTSBSEEEEETCCCCHHHHHHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHH
T ss_conf 62567788984455237963542024441566677776522010011795499980542346774053570664311333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 aa~i~g~~i~i~~~~~~~~~~~~~~l~~mg~~i~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 320 (419)
T d1ejda_ 241 AAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGT 320 (419)
T ss_dssp HHHTTTCEEEEESCCGGGCHHHHHHHHHTTCEEEECSSEEEEECTTCCCBCCCEECCSTTSCCGGGHHHHHHHHHTSBSE
T ss_pred HHCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCC
T ss_conf 22156865521677806778898876642313997377699997676544300256632234421145541222187361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~ke~dr~~~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiAMa~aia~l~~~g~~~I~~~~~i~~SyP 400 (419)
T d1ejda_ 321 GVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYE 400 (419)
T ss_dssp EEEECCSCSSCCTHHHHHHHTTCEEEEETTEEEEECCSCCBCCEECCSSHHHHHHHHHHHHHSBEEEEECCTHHHHHHSS
T ss_pred EEEEEECCCHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEECCCEEEECCCH
T ss_conf 67764023438789999996889799969999997999863761613838999999999981999499836137868734
Q ss_pred ------------------C
Q ss_conf ------------------9
Q 003615 112 ------------------C 112 (807)
Q Consensus 112 ------------------C 112 (807)
=
T Consensus 401 ~F~~~l~~LGa~I~~~~~~ 419 (419)
T d1ejda_ 401 RIEDKLRALGANIERVKGE 419 (419)
T ss_dssp SHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEECCC
T ss_conf 0999999679899997179
|
| >d2df7a1 b.121.4.9 (A:11-429) Birnavirus VP2 {Infectious bursal disease virus [TaxId: 10995]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: Positive stranded ssRNA viruses family: Birnaviridae-like VP domain: Birnavirus VP2 species: Infectious bursal disease virus [TaxId: 10995]
Probab=100.00 E-value=0 Score=31665.13 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~ylksll~PetgpasIPDD~~~rH~l~~etstyNL~~~~sGsGllv~fp~~P~s~vGaHY~~~~~~~l~FDq~l~TsQ 80 (419)
T d2df7a1 1 IVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQ 80 (419)
T ss_dssp CCHHHHHHHCGGGCCCCCCSSCCCCBEEEEEEEEEEEECCTTSCEEEEECTTCSSSEEEEEEEECTTSCEEEEEEEECSS
T ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHHH
T ss_conf 91465554285678878971788877542033045369726885699991799875210278972788576465556667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 dLkk~~nYgRliSr~~~i~SstLPaGvYAlnGT~Na~tf~GslSEv~~~sYn~lmS~ttN~~DKv~NvLV~~GVtVLsLP 160 (419)
T d2df7a1 81 NLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLP 160 (419)
T ss_dssp CGGGTEEEEEEEEEEEEEEECCCCTTCCBCCCEEEEEEESSCGGGCSCCSTTGGGGSCSCGGGEEEEEETTTCEEEECCC
T ss_pred HHHHHHCHHHHHCEEEEEEECCCCCEEEEECCEEEEEEEECCHHHHHCCCHHHHEECCCCHHHHHCCEEECCCEEEEECC
T ss_conf 66766333321002466651357743455246154589824667600246101002126802530789823864999757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 TgfD~pYVRLgDetP~~gl~p~~~a~ct~a~~PR~Y~I~~a~~yq~~sq~q~gGtt~Tlfs~NiDavtSlsVtGdivFq~ 240 (419)
T d2df7a1 161 TSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVTITLFSANIDAITSLSIGGELVFHT 240 (419)
T ss_dssp SCSSCCCEECCEECCCCCSCTTCCCEECCCSSCEEEEEEEEEEEEEEEECCTTCEEEEEEEEEEEESSCEEEEEEEEEEC
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEE
T ss_conf 66788735647888765778765430365568733575367545547755678688898750001104267400699972
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~dati~~IG~DGt~vi~~avas~nGlt~G~dn~~pfnlviPT~eITqPITsIKLeivt~k~gg~ag~~~s~~~~ 320 (419)
T d2df7a1 241 SVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSAS 320 (419)
T ss_dssp SSSSEEEEEEEEEEETTSCEEEEEEEEEEEECCTTSCEEEEEEEEECGGGCCSCEEEEEEEEEEEETTCCTTCEEEEEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 36651873799996326974788899706765356355443103236776775512789999952136754753222456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 gs~svT~~gGN~PGvLRPvTlVAYE~vapgsilTVaGVSNyELIPNPeL~KN~~t~yG~~dP~~l~y~K~iLs~Re~L~i 400 (419)
T d2df7a1 321 GSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGI 400 (419)
T ss_dssp EEEEEEETTTTSTTSSCCEEEEEEESCCTTCEEEEEEEEEEEEEECHHHHTTCCCBCCCCCTTHHHHHHHHHHTHHHHTC
T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCHHHCCHHHHHHCCHHHCCC
T ss_conf 64699965887778768658999840257746999602451324897897406332356583434288777434311486
Q ss_pred ------------------C
Q ss_conf ------------------9
Q 003615 112 ------------------C 112 (807)
Q Consensus 112 ------------------C 112 (807)
-
T Consensus 401 rtvw~~~~Y~~~~~~f~e~ 419 (419)
T d2df7a1 401 KTVWPTREYTDFREYFMEV 419 (419)
T ss_dssp CSEEEHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHCC
T ss_conf 3660277878999887439
|
| >d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=31589.71 Aligned_cols=1 Identities=0% Similarity=-0.196 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~p~~~~~~p~~~~~~e~ll~~A~~Fi~qyy~e~~~~~~~~~~ 80 (418)
T d1om4a_ 1 RFLKVKNWETDVVLTDTLHLKSTLETGCTEHICMGSIMLPSQHTRKPEDVRTKDQLFPLAKEFLDQYYSSIKRFGSKAHM 80 (418)
T ss_dssp CCEEEEBTTTCCEEEECGGGGCCSCCSCCSSCBCTTCSCC-----------CHHHHHHHHHHHHHHHHHHTTCTTSHHHH
T ss_pred CCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 95245540478756320434167889987564366222453457888889987899999999999999863435868999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Rl~ev~~eI~~tGtY~~T~~EL~~GAk~AWRNs~RCIGRi~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~Ir~~ 160 (418)
T d1om4a_ 81 DRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSA 160 (418)
T ss_dssp HHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSCCCE
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 99999999997455620899999887899870454233500116571565678999899999999999997079987623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ITVFpp~~~~~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLviq~~g~~p~~feiP~ 240 (418)
T d1om4a_ 161 ITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKAPRGRFDVLPLLLQANGNDPELFQIPP 240 (418)
T ss_dssp EEECCCCSSSSSCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHTTTCCCCCCTTCBCCEEEECTTCCCEEECCCG
T ss_pred EEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCH
T ss_conf 89737988899986565488886626568998764783137999999976898999987702089997899972574887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRNl~D~~RYN~L~~VA~~mGLDT 320 (418)
T d1om4a_ 241 ELVLEVPIRHPKFDWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMDLDM 320 (418)
T ss_dssp GGCCEEECCCSSCTTGGGGCCEEESCCCBCSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHHTCCC
T ss_pred HHEEEECCCCCCCHHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78246435598975477559837625011365232088855346745341123365415667565664899999849788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~Sgs~tpvfH~~~~n~ 400 (418)
T d1om4a_ 321 RKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNY 400 (418)
T ss_dssp SCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCCCCHHHHSCSSSGGGSGGGGBCCCBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHCC
T ss_conf 99740577889999999999899887964805278999999999999981899998852777888653441677765353
Q ss_pred -----------------C
Q ss_conf -----------------9
Q 003615 112 -----------------C 112 (807)
Q Consensus 112 -----------------C 112 (807)
-
T Consensus 401 ~l~P~f~yq~~~w~th~w 418 (418)
T d1om4a_ 401 RLTPSFEYQPDPWNTHVW 418 (418)
T ss_dssp CCSSEEECCCCGGGTCCC
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 147886557986446789
|
| >d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IlvD/EDD N-terminal domain-like superfamily: IlvD/EDD N-terminal domain-like family: lvD/EDD N-terminal domain-like domain: 6-phosphogluconate dehydratase EDD species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=31583.03 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~i~~vt~rI~~RS~~~r~~Yl~~i~~~~~~~~~r~~l~c~nlAh~~aa~~~~dk~~l~d~~kP~IGIvns~~d~~pc 80 (418)
T d2gp4a2 1 MHSVVQSVTDRIIARSKASREAYLAALNDARNHGVHRSSLSCGNLAHGFAACNPDDKNALRQLTKANIGIITAFNDMLSA 80 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97179999999999708779999999999875488711135521777887068302556763179969998352346464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 h~hl~~l~~~vK~gv~~~gg~~~~~~~~p~~cDGit~G~~GM~~SL~SRelIA~siE~~~~~~~~Dg~V~l~~CDK~vPG 160 (418)
T d2gp4a2 81 HQPYETYPDLLKKACQEVGSVAQVAGGVPAMCDGVTQGQPGMELSLLSREVIAMATAVGLSHNMFDGALLLGICDKIVPG 160 (418)
T ss_dssp ---------CCC---CCCCEEEEECC-BC--CCCCCCSSSGGGGHHHHHHHHHHHHHHHHTTCCCSEEEEECCSTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH
T ss_conf 24299999999999997178663567645534651378653013130022789899998624765617997338998768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~lMaa~r~n~lPsI~v~gGpm~~G~~~~~~~~~~~~~~~G~i~~~el~~~E~~a~p~~GtC~~mgTANTm~~l~EalGl~ 240 (418)
T d2gp4a2 161 LLIGALSFGHLPMLFVPAGPMKSGIPNKEKARIRQQFAQGKVDRAQLLEAEAQSYHSAGTCTFYGTANSNQLMLEVMGLQ 240 (418)
T ss_dssp HHHHHHTTTTSCEEECCCCC-------------------CCTHHHHHHHTTSSCHHHHHHHHHCC-----CHHHHHTTCS
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999843678779971577689746777725753032233569999999874668878663267798999999971567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 LPGsa~vpa~~~~r~~~a~~ag~~~~~~~~~~~~~~~~~dIlt~~a~~NAi~~~~A~GGSTNavlHL~AIA~eaGi~l~l 320 (418)
T d2gp4a2 241 LPGSSFVNPDDPLREALNKMAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLTMHIVAAARAAGIIVNW 320 (418)
T ss_dssp CTTGGGSCTTCHHHHHHHHHHHHHHHHTSTTSSSCCCHHHHSSHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHTTCCCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCH
T ss_conf 52124788861899999998999999999851267897786199999711168760562675320629999654898989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~dfd~is~~~P~L~~l~P~G~~~m~d~~~AGGvp~v~k~L~~~glLh~D~~TVtG~tl~e~l~~~~~~~~~i~~~~~p~~ 400 (418)
T d2gp4a2 321 DDFSELSDAVPLLARVYPNGHADINHFHAAGGMAFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTV 400 (418)
T ss_dssp HHHHHHHTTCCBCBCCGGGSSCCHHHHHHHTHHHHHHHHHHHHTCSCCCCEETTEECGGGGGEEEEEETTEEEEEECCSS
T ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCC
T ss_conf 99999857888544441598621889876069999999998788856999883886799997077766774000468777
Q ss_pred -----------------C
Q ss_conf -----------------9
Q 003615 112 -----------------C 112 (807)
Q Consensus 112 -----------------C 112 (807)
=
T Consensus 401 ~~d~~VIrp~~~P~~~~G 418 (418)
T d2gp4a2 401 SLDTEVLTSVATPFQNNG 418 (418)
T ss_dssp CSCTTTBCCSSSCSBSSC
T ss_pred CCCCCEECCCCCCCCCCC
T ss_conf 899887576555779999
|
| >d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=31580.60 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~pRw~~i~r~yta~dv~~lrgs~~~~~~~a~~~a~~Lr~lL~~~~~v~~~Ga~d~~~A~~~ 80 (418)
T d1f61a_ 1 ASVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQ 80 (418)
T ss_dssp CCCTTCCCCHHHHHHHHHHCGGGTTCCCSSCHHHHHHTSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
T ss_conf 98456504599999998629882778799899999986688775425789999999999836997884144778999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~kaGf~aiY~SG~~vaa~~s~s~~g~PD~gl~~~~ev~~~v~~I~~~~~~~d~~~~~~~~~~~~~~~~PIIaDaDtGfG~ 160 (418)
T d1f61a_ 81 VRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGG 160 (418)
T ss_dssp HHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTCSSS
T ss_pred HHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
T ss_conf 98199889854276523454556886665555167899999999988788999998740466433567768753333453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~nv~rtvk~~i~AGaAgihiEDQ~~~~KkCGH~~GK~lvp~~e~~~ki~Aa~~a~d~~~~~~~iiARTDA~~a~~i~s~ 240 (418)
T d1f61a_ 161 ALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSD 240 (418)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
T ss_conf 78999999999983786899734677776556667766688999999999998766437998489997160232355333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~d~~D~~~i~g~rt~eG~y~~~~g~e~AI~Ra~aya~~gd~i~~e~~~~~~ee~~~f~~~v~~~~~~~~l~~~~sPsf~w 320 (418)
T d1f61a_ 241 VDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNW 320 (418)
T ss_dssp CSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCSSSCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
T ss_conf 43233444455457664001457789999999963543671885057899999999986248873332035676567770
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~eL~~~Gy~~~~i~la~~~a~~~a~~~la~~~~~~Gm~ay~elQ~re~~~~~~Gy~~~khQ~~vG~~ 400 (418)
T d1f61a_ 321 KKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAG 400 (418)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCCTTSHHHHTTHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
T ss_conf 11467766543399999609629996138999999999999999986676277877658888874698556401330532
Q ss_pred -----------------C
Q ss_conf -----------------9
Q 003615 112 -----------------C 112 (807)
Q Consensus 112 -----------------C 112 (807)
-
T Consensus 401 y~D~~~~~~~~~~s~~a~ 418 (418)
T d1f61a_ 401 YFDRIATTVDPNSSTTAL 418 (418)
T ss_dssp HHHHHHHHHCTTSCCCCC
T ss_pred HHHHHHHHHCCCHHHHCC
T ss_conf 788889884787053139
|
| >d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]
Probab=100.00 E-value=0 Score=31576.50 Aligned_cols=1 Identities=0% Similarity=0.437 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~ 80 (418)
T d2r5ea1 1 KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS 80 (418)
T ss_dssp CCCCCGGGTTCCCCHHHHHHHHHHHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98643464179988999999986589988716889999889999999999983899667678998788999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (418)
T d2r5ea1 81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLD 160 (418)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECC
T ss_pred HHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 98599999641589917973321100222013333200122345004678987498699997214556663055666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~ 240 (418)
T d2r5ea1 161 NNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 88776654114441241786865443331888777753442178122102102120157876531003655543145665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d2r5ea1 241 SAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASF 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57754268876445323431133444211222333345620210122233222334453256788888988764667766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~ 400 (418)
T d2r5ea1 321 LAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK 400 (418)
T ss_dssp HHHTTCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCC
T ss_conf 76428701379812499787223565111012034467899999999878999968256478877667899899995699
Q ss_pred -----------------C
Q ss_conf -----------------9
Q 003615 112 -----------------C 112 (807)
Q Consensus 112 -----------------C 112 (807)
-
T Consensus 401 ~e~l~~a~~rl~~~lg~~ 418 (418)
T d2r5ea1 401 DENLQKAAEILRKWKGSS 418 (418)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999987359
|
| >d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31573.79 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~r~~~~~~~~~~~~~~~~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~ 80 (418)
T d1w7la_ 1 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80 (418)
T ss_dssp CCSCGGGTTCCCCTHHHHHHHHHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97670002799899999999747899788889889998899999999999857974468899867899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d 160 (418)
T d1w7la_ 81 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 160 (418)
T ss_dssp HTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECC
T ss_pred HCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 58998810115642585799999998622677615304556600689999749874014566542223443224575300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~ 240 (418)
T d1w7la_ 161 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEC
T ss_conf 55430223566531112676776564333889999999998629871155666775158989989777165445552001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d1w7la_ 241 SAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRS 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 56764268877434322320255553023322322232025677887765222333344332223102333200012345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~ 400 (418)
T d1w7la_ 321 LQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK 400 (418)
T ss_dssp HHTTTCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECC
T ss_conf 66438812379820499887710002320101345553589999999997999997454426787667779979999738
Q ss_pred -----------------C
Q ss_conf -----------------9
Q 003615 112 -----------------C 112 (807)
Q Consensus 112 -----------------C 112 (807)
=
T Consensus 401 ~~~~l~~a~~rl~~~~~~ 418 (418)
T d1w7la_ 401 DEATLQAMDEKLRKWKVE 418 (418)
T ss_dssp CHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998667
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31510.79 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~ 80 (417)
T d1pv7a_ 1 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWII 80 (417)
T ss_dssp CHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 98665715899999999999999999999999999802999999999999999999999999999999817539999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (417)
T d1pv7a_ 81 TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGI 160 (417)
T ss_dssp HHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999988763014678889999877650122233202211222344113456777788765403554455300012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (417)
T d1pv7a_ 161 MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD 240 (417)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 33456653211003489999999999842332102322002320233222211001222222110246688999887641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T d1pv7a_ 241 QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKT 320 (417)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 22222222223333210000011222223322221024444200122210003657888886520113322111457899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l 400 (417)
T d1pv7a_ 321 LHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL 400 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998798489999999999999999999999999999997989999999999999999999753
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 ~~~~~~~~~r~~~~e~a 417 (417)
T d1pv7a_ 401 SGPGPLSLLRRQVNEVA 417 (417)
T ss_dssp CCSSCTTHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHCCCC
T ss_conf 27785436675323379
|
| >d3bona1 d.92.1.7 (A:3-419) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]
Probab=100.00 E-value=0 Score=31506.49 Aligned_cols=1 Identities=0% Similarity=-1.557 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~nnnFNyndPVnn~~Ily~~~p~~~~~~~~KAF~I~~nIWIiPER~~~~~~~~~d~~~p~~~~~~~~~yYDpnyLsTD~ 80 (417)
T d3bona1 1 FVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDN 80 (417)
T ss_dssp CCSCCCCTTSCCCSSSEEEEECC--CCCCCEEEEEEETTEEEEEEECCSSCTTCCSCSCC----CCSSCCCCTTTTCSHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCH
T ss_conf 96677777898899718999567788776034477426768830343567888666689701025876412753245613
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 EKD~FLk~~IKLf~RINsn~~G~~LL~~I~~aiPflG~s~~~~~~~~~~~~svni~~~~g~~~~~~~NlvIfGPgpnI~e 160 (417)
T d3bona1 81 EKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQ 160 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHCCCCCBCCSSTTEEBCCGGGEEEEECTTSCEEEEECSEEEEECCSSTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEECCCCCCCC
T ss_conf 78899999999999854857899999999726877789988711256641157764489854554215899889863145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 n~~~~~~~~~~n~s~~GfGsi~~i~FsPe~~~~f~~~~~~~~~~~~~~~~F~~DPAl~L~heLIhsLh~LYGik~~~~~~ 240 (417)
T d3bona1 161 FECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRV 240 (417)
T ss_dssp CEEECCCCSSCCTTTSSCCCCEEEECCTTEEEEECSSHHHHTCTTSCCCCEECCHHHHHHHHHHHHHHHHTTCCCCTTCE
T ss_pred CCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 54323034457733047650589997764377604533455555545343542889999999999988760756788741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~i~~eEl~tFGG~D~~iI~~~~~~~~~~k~l~~yk~Ia~rl~kvn~~~~~~~~l~~yK~~F~~KY~ 320 (417)
T d3bona1 241 FKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYL 320 (417)
T ss_dssp EECCSCHHHHHTTCEEEHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHCCEESSSSSCHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 32121122343246645777765169781105846788899999999999999987525678885236999999988744
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 l~~d~~g~~~vn~~kF~~~yk~L~~~fTe~~~a~~fkvk~Rk~Y~~~~~~~~~~nlldd~iYtI~eGFNi~~~nl~~~~~ 400 (417)
T d3bona1 321 LSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFN 400 (417)
T ss_dssp CEECTTCCEECCHHHHHHHHHHHHHTSCHHHHHHHHTCCCCSCSSSCCCEEEECCCSSTTTCBTTTBTSCTTSTTSSTTG
T ss_pred CCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCCEECCCCCCCCCCCCCCCCC
T ss_conf 65278885895389999999999711588888766501434420000244100144676531314552146665345557
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 GQN~~iN~~~~~~~~~~ 417 (417)
T d3bona1 401 GQNTEINNMNFTKLKNF 417 (417)
T ss_dssp GGBTTTTGGGCEEEEEC
T ss_pred CCCHHHCHHHHHHHCCC
T ss_conf 76522153442442069
|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31505.57 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 P~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r~r~i~Y~lsl~E~~vpY~~~~p~~ 80 (417)
T d1w6ga1 1 PLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIR 80 (417)
T ss_dssp SCCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred CCCCCCCCCEEECCCCCCEEECCCCEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCHH
T ss_conf 98888998305689999879778988997687899970787661999999818984766899801236798788998356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L 160 (417)
T d1w6ga1 81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM 160 (417)
T ss_dssp TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEEEEE
T ss_conf 21016733452633412346558999866768237872688998861653788624788227888704781368750069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG~~Nsv~ 240 (417)
T d1w6ga1 161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVE 240 (417)
T ss_dssp EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred EEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCEEE
T ss_conf 99999973202089999994696799999988999871347888986437646756555321357774355479976699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~~s~~~ 320 (417)
T d1w6ga1 241 EEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIA 320 (417)
T ss_dssp EEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHH
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 99617842797665454789999988762563220266686489998799858899944599855887764579876011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~gf~L 400 (417)
T d1w6ga1 321 RRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKL 400 (417)
T ss_dssp HHTGGGGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEE
T ss_pred HCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEE
T ss_conf 02322106378856877662677777447789998467510899423786799995784248985447997620577999
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 ~P~nFF~~nPald~p~s 417 (417)
T d1w6ga1 401 RPEGFFDRSPVLDVPAN 417 (417)
T ss_dssp EESSCSSSCTTTTCCCC
T ss_pred ECCCCCCCCCCCCCCCC
T ss_conf 87877899986678999
|
| >d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: YbiU-like domain: Hypothetical protein YbiU species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31504.88 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~p~dl~~~i~~~K~~Lr~~~~~~~~~f~~l~~~i~~ev~eI~~l~~~G~~iIPeI~F~dI~~~~~~~~~~~~I 80 (417)
T d2csga1 1 TPFTHETLPADPKAAIRQMKQALRAQIGDVQAVFDRLSATIAARVAEINDLKAQGQPVWPIIPFSELAMGNISDATRAEV 80 (417)
T ss_dssp CTTCCSSCCSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCBCCHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHH
T ss_conf 99876678898389999999999965678999999999999999999999996199985065589952678998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 krrG~vVIRnV~p~e~a~~w~~~l~~Yle~n~~~~~~~~~~d~~f~~lp~~~pqiy~lyws~~q~~aR~~p~~~~~~~~l 160 (417)
T d2csga1 81 KRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQSFL 160 (417)
T ss_dssp HHHSEEEETTSSCHHHHHHHHHHHHHHHHHTTHHHHCCCCCCCTTTTSSSCCCSSCCCCCBHHHHHHHHCHHHHHHHHHH
T ss_pred HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHH
T ss_conf 86188998887899999999999999998286420036864310012355677744242689999874495899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~lw~~~~~~~~~~~~~~~l~y~DR~r~r~Pg~~~~~l~pH~D~Gs~erW~d~~y~~~y~~if~g~we~ydPw~~~~R~~ 240 (417)
T d2csga1 161 NRLWQVEHDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFASVFNGNVEQYDPWNAAHRTD 240 (417)
T ss_dssp HTTSBCCSSSSCSSEEEEECCCCCCEECCCTTCCBCCEEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGG
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 85202368866412577743045503137999876786755689850103563125688887558842279876423320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~l~~~~~~cs~FR~fQGwlaLs~~~p~dGtL~v~P~~~~~ay~llrpf~~d~~~~~~~g~~pg~~~~~~~~~h~~l~ 320 (417)
T d2csga1 241 VEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPISEQWHPLLM 320 (417)
T ss_dssp CCCCCCTTCCCCCSCCSEEEEEESSCBCTTSSCEEECCCGGGHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH
T ss_pred CHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 00034478765414778887752366788887379963403577887240125556655677776655545633315650
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~v~ip~~~pGD~V~Wh~d~iH~v~~~~~g~~~s~V~Yi~~~P~~~~N~~yl~~qr~aF~~g~~ppdFp~~~~E~~~~g 400 (417)
T d2csga1 321 AALTSIPPLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYARKVKAALETGASPGDFPREDYETTWEG 400 (417)
T ss_dssp TTCEECCCBCTTCEEEEETTCCEEECCBSSCSSCCCEEECCBCEESHHHHHHHHHHHHHHHHTCCCTTSCSCCGGGSCSS
T ss_pred CCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 86155245688887887078753446678999865389842788846559999999999975999877789987543356
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 r~~~~~ls~~G~r~mGL 417 (417)
T d2csga1 401 RFTLRDLNIHGKRALGI 417 (417)
T ss_dssp BCCGGGCCHHHHHHTTC
T ss_pred CCCHHHCCHHHHHHCCC
T ss_conf 88946528999986289
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31504.71 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~PL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 80 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK 80 (417)
T ss_dssp CCCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHH
T ss_conf 99898999899847704899999999983993999898999871210488898985188897089984999769398899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~nP~lI~~sisgfG~~GP~~~~~~~D~~~qA~sG~~~~~g~~~~~P 160 (417)
T d1q7ea_ 81 EVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP 160 (417)
T ss_dssp HHHHHHHHHCSEEEECCCC-------CCHHHHHHHCTTCEEEEEESSCTTSTTTTSCCCHHHHHHHTTHHHHSSCTTSCC
T ss_pred HHHHHHHHCCCCCEECCCCCCHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999984086407546887175528889999866878788763222454344565334543333223201126656798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (417)
T d1q7ea_ 161 LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP 240 (417)
T ss_dssp CCCSSCTTTHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTSTTTTTSCCCSSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 52224431679999999999999999985499739997789999986689998554320002222244344655677788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~~~~~~~~~p~~~~~~~~~~t~dg~i~~~~~~~~~w~~l~~~lg~~dl~~d~~~~~~~~r~~~~~~l~~~i~~~~~~~t 320 (417)
T d1q7ea_ 241 RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTID 320 (417)
T ss_dssp CCTTCCSSSSCEEEEECTTTTTCTTCEEEEECCGGGHHHHHHHTTCGGGGTCTTTSSHHHHGGGHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66656888886430133015517983999732312556899985885101332000000122119999877765211333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~e~~~~l~~~~ip~~pV~~~~e~~~dpq~~~r~~~~~~~~p~~g~~~~~g~p~~~s~~~~~~~~aP~lGeht~eIL~el 400 (417)
T d1q7ea_ 321 KHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQEL 400 (417)
T ss_dssp HHHHHHHHGGGTCCEEECCCHHHHHHCHHHHHTTSEEEEEETTTEEEEEECCSSCCSSCCCCCCCCCCTTTTHHHHHHHT
T ss_pred CCHHEEEEECCCEEEEECCCHHHHHHCHHHHHCCCEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 10110123237702674488999976989897299999666998823644788604899999999999984599999986
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
=
T Consensus 401 G~s~~~I~~L~~~gvI~ 417 (417)
T d1q7ea_ 401 GYSDDEIAAMKQNHAIE 417 (417)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHCCCCC
T ss_conf 99999999999781939
|
| >d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=31502.82 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~n~~ti~d~~d~~gK~VllRvD~NvPi~~g~i~dd~RI~~~~pTI~~l~~~~a~kvil~sH~GRP~g~~~~~~SL~ 80 (417)
T d1ltka_ 1 HHHLGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLK 80 (417)
T ss_dssp CCCSSSCCBSSSCCCCTTCEEEEEECCCCCEETTEESCTHHHHHTHHHHHHHHTTCCSEEEEECCCSCCTTSCCGGGCSH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH
T ss_conf 97444675023111258998999943477654993896889999999999999879985999847999999889875879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~IlLLENvRF~~eE~~~~~~~~~~~~~~~~~n~~~f~k~LA~laD 160 (417)
T d1ltka_ 81 PVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLAD 160 (417)
T ss_dssp HHHHHHHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCGGGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999868465556553202245430247865378740021021012356432221000122307999999860385
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 vyVNDAF~~aHR~haS~vgi~~~~~~aG~L~ekEl~~L~~~l~~~~kP~vaIlGGaKvsdKi~vi~~L~~k~D~iiigG~ 240 (417)
T d1ltka_ 161 VFINDAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGG 240 (417)
T ss_dssp EEEEECTTSCSSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESS
T ss_pred EEEECCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEHH
T ss_conf 89963531231047632312120112368999999999999854566736998567744269999878865111663036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 mantfL~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~ 320 (417)
T d1ltka_ 241 MAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPK 320 (417)
T ss_dssp HHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEEEEETTTCCCTTCEEEEECHH
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCH
T ss_conf 67889886148766753103567899999999998639961002322430234567643312333567753444411511
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 Ti~~~~~~I~~aktI~WNGP~GvfE~~~F~~GT~~l~~~i~~~t~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~ 400 (417)
T d1ltka_ 321 SIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGAS 400 (417)
T ss_dssp HHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECCSTTHHHHHHHTCGGGSSEECCCSHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHH
T ss_conf 12679998646877999898344446624278999999999883179979995789999999639746880897578999
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 Le~L~G~~LPgieaL~~ 417 (417)
T d1ltka_ 401 LELLEGKELPGVLALSN 417 (417)
T ss_dssp HHHHTTCCCHHHHTSCC
T ss_pred HHHHCCCCCCCEECCCC
T ss_conf 99987999762001249
|
| >d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4 [TaxId: 10843]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Microviridae-like VP domain: Microvirus capsid proteins species: Bacteriophage G4 [TaxId: 10843]
Probab=100.00 E-value=0 Score=31502.67 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~DlsH~~~~t~~~G~L~PI~~~eVLPGDtf~l~~~~f~Rlat~~~pvmdn~~~d~ffFfVP~RlvW~dnWekF~g~~~ 80 (417)
T d1gff1_ 1 VPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECDMVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGV 80 (417)
T ss_dssp CEECCCEEEEEEECSSBCEEEEEEEECTTCEEEEEEEEEEEECCBSSSCCSCEEEEEEEEEEESHHHHTHHHHHHHHHGG
T ss_pred CCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCHHHHHEEEEEEEEECCEEEEEHHHHHHHHCCCC
T ss_conf 98554500110455650678775142589755644123201266532211210667899852411354125899756878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 np~~vP~vt~~~g~~~~dYlG~P~~~~~~~~~l~~rAYn~I~NewfRd~nl~ds~~v~~~dgpdd~a~y~lr~~~~~dyf 160 (417)
T d1gff1_ 81 NASPLPPVTCSSGWDSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPSEDYKWGVRVANLKSIW 160 (417)
T ss_dssp GCCCCCCEECCSSTTSSGGGSSCCCTTSEECHHHHHHHHHHHHHHTSCTTSCCCCCSSGGGSCTTTTTTCCBCBCCCCST
T ss_pred CCCCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 98878706458874387618888888732102478999999997713734355335147778875102222201101310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Ts~LP~~~~~s~~~g~~~~s~d~~gL~~a~a~ti~~lr~a~flQr~~Ei~argG~r~~~~v~~~d~rlqr~eylggg~~~ 240 (417)
T d1gff1_ 161 TAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKEFGGHTSYDGDNRPLLLMRSEFWASGYDV 240 (417)
T ss_dssp TSCCCTTCCSCCCCCCCSSCCCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHTTTCCCCTTTTTCCEEEEEEEEEECCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 13589998877556888664470435666667899999999999999999734983554576827765214765366422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~Tdqt~lg~~sg~g~~~~~~~v~~~~~~EHG~I~~L~~vr~~~t~~q~~~~~~~~~d~~~p~fa~Dp~l~geqP~~n~e 320 (417)
T d1gff1_ 241 DGTDQSSLGQFSGRVQQTFNHKVPRFYVPEHGVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVS 320 (417)
T ss_dssp ECCSTTTTTCEEEECEEEEEEEEEEEECCSSEEEEEEEEEECCCCBTTBCCHHHHSSSCCHHHHSCCHHHHTTSCCEEEE
T ss_pred CCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCCCC
T ss_conf 46653112331032487215633553245541899999853786101045541562001452330680110347742323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 i~~~~~s~d~~v~Gy~~r~~~YR~~p~~V~g~f~sLd~W~~~~~~psl~~~~~v~v~~~~~D~~f~s~~~~q~~~~~~fn 400 (417)
T d1gff1_ 321 LKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTDLKDRVLVNTNNYDEIFQSMQLAHWNMQTKFN 400 (417)
T ss_dssp TTTTBSSCCTTCEEEECTTGGGSCCCCCCCTTTTTCTTCCSBCSCCCSSTGGGTBCCGGGGGGGBSSCSSCSEEEEEEEE
T ss_pred HHHHCCCCCCCEEECCHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCHHHCEEECCCCCCHHHHCCCHHHHHEEEEEE
T ss_conf 54404778864014012045552472010200004564132114889984460152687503666137505500114775
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
.
T Consensus 401 ~~v~R~mPt~~~~i~~~ 417 (417)
T d1gff1_ 401 INVYRHMPTTRDSIMTS 417 (417)
T ss_dssp EEEECCCCCHHHHSCCC
T ss_pred EEEEECCCCCCCCCCCC
T ss_conf 67860489854332469
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31498.93 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~v~VmlPLd~v~~~~~~~~~~~~L~~LK~aGV~gV~vdVwWGivE~~~Pg~Ydws~yd~l~~mv~~~GL 80 (417)
T d1vema2 1 AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGM 80 (417)
T ss_dssp CGGGCCCCTTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98887788995389986622245667889999999999983997899933424310589983570899999999998698
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Ki~vvmsfH~cGgnvgd~~ti~lP~Wv~e~~~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I 160 (417)
T d1vema2 81 KMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVI 160 (417)
T ss_dssp EEEEEEECSCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGB
T ss_pred EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 28999874235787788615688888870554888167768898883703766698701004167887999987740047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~ei~vglGp~GELRYPsyp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln~aWG~~~~~~~~~~~p~~~~ff 240 (417)
T d1vema2 161 AKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQF 240 (417)
T ss_dssp CCEEECCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTCCCSSGGGCCSCSCHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99986057420003788810015657998866578999999999999860665632235228999754576778888766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~g~~s~YG~fFL~WYs~~L~~Hgdrvl~~A~~~F~~~~~v~l~~Kv~giHWwy~~~t~shaaElTAGydgY~~i~~~~ 320 (417)
T d1vema2 241 LMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGYNDYSHLLDAF 320 (417)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTTCSSSTTTTHHHHTCSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 67983533335589999999999999999999985189877279999465033689999874154405855779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~r~~~~l~ftc~em~d~~~~~~~s~Pe~Lv~qv~~aa~~~gv~~~gENAl~~~d~~~~~~i~~~~~~~~~~~fTylRm~~ 400 (417)
T d1vema2 321 KSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLANEKGIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQD 400 (417)
T ss_dssp HHHTCEEEESCCSCCCCCCTTTCCCHHHHHHHHHHHHHHHTCCEEEECSSCCCSHHHHHHHHHHHHHTTCSEEEESCHHH
T ss_pred HHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
T ss_conf 86697598761244568899655797999999999999829936510053014867999999971127876157975656
Q ss_pred ----------------C
Q ss_conf ----------------9
Q 003615 112 ----------------C 112 (807)
Q Consensus 112 ----------------C 112 (807)
-
T Consensus 401 ~l~~~~n~~~F~~fv~~ 417 (417)
T d1vema2 401 VMYNNSLMGKFKDLLGV 417 (417)
T ss_dssp HHTCHHHHHHHHHHTSC
T ss_pred HHCCCCCHHHHHHHHCC
T ss_conf 55796428889887439
|
| >d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=31436.17 Aligned_cols=1 Identities=0% Similarity=-0.594 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~p~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~~~~~~~~p~~~~~~~e~ll~eA~~Fi~q~y~e~~~~~~~ 80 (416)
T d1q2oa_ 1 GPKFPRVKNWELGSITYDTLCAQSQQDGPCTPRRCLGSLVLPRKLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQ 80 (416)
T ss_dssp CCSSCEEEBTTTCCEEECCGGGGCCBCCSCCSSCBCTTCSCC-----------CCHHHHHHHHHHHHHHHHHHTTCTTSH
T ss_pred CCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99745655404687563324442678899876733560025644466888999998999999999999999862756778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGR~~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~I 160 (416)
T d1q2oa_ 81 AHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNRGNL 160 (416)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999997464620899999887899870455222300216572665678999899999999999997079987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 r~~ITVFp~~~~g~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLViq~~g~~p~~fe 240 (416)
T d1q2oa_ 161 RSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEAPELFV 240 (416)
T ss_dssp CCEEEECCCCBTTBCCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHHTTCCCCCSSSCBCCEEEECTTSCCEEEC
T ss_pred CEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
T ss_conf 63389737988999986675488786626578998764684216999999976888999987710289997899972673
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 iP~elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRnl~D~~RYN~L~~VA~~mG 320 (416)
T d1q2oa_ 241 LPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFSAAPFSGWYMSTEIGTRDLCDPHRYNILEDVAVCMD 320 (416)
T ss_dssp CCGGGSCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHTT
T ss_pred CCHHHEEEECCCCCCCCHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 88778357346798983066638857605211255000077844245645330022355430455566666899999848
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 LDT~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~S~s~TpvfH~~~ 400 (416)
T d1q2oa_ 321 LDTRTTSSLWKDKAAVEINLAVLHSFQLAKVTIVDHHAATVSFMKHLDNEQKARGGCPADWAWIVPPISGSLTPVFHQEM 400 (416)
T ss_dssp CCTTCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCBCCHHHHSCSSSGGGSGGGGBCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHH
T ss_conf 78889740467789999999999899877964704068899999999999983899998852777888754541676665
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
-
T Consensus 401 ~n~~l~P~f~yq~~~w 416 (416)
T d1q2oa_ 401 VNYILSPAFRYQPDPW 416 (416)
T ss_dssp BBCBCSSEEECCCCCC
T ss_pred HHCCCCCCCCCCCCCC
T ss_conf 5034588865589999
|
| >d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31431.79 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 l~~~~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r 80 (416)
T d1dfoa_ 1 LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR 80 (416)
T ss_dssp CCTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98658845519999999999999987690586476657899999855741475658899975447773099999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~lF~a~~anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~ 160 (416)
T d1dfoa_ 81 AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ 160 (416)
T ss_dssp HHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99983998205601557557999999863898866421465433335555544467237999646687667447899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrggiI~~ 240 (416)
T d1dfoa_ 161 AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA 240 (416)
T ss_dssp HHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSCEEEEE
T ss_pred HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEE
T ss_conf 99836564873432255655879999998751715872212000003244347860000046521001046878638984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlv 320 (416)
T d1dfoa_ 241 KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV 320 (416)
T ss_dssp SSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
T ss_conf 23117689998766086534685177898988779987097889999999999999999998389443369988753688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~~~~~~~~~ 400 (416)
T d1dfoa_ 321 DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER 400 (416)
T ss_dssp ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 73045898999999999729688678588999988889821767789984899879999999999999972786799999
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
-
T Consensus 401 ir~~V~~l~~~fPly~ 416 (416)
T d1dfoa_ 401 IKGKVLDICARYPVYA 416 (416)
T ss_dssp HHHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHCCCCCC
T ss_conf 9999999998089989
|
| >d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: L-rhamnose isomerase domain: L-rhamnose isomerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31429.26 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 s~i~~~ye~a~e~ya~~GID~e~al~~L~~~~Is~h~WqGddv~gFe~~~g~ltGGi~~tGnyPG~aR~~~E~~~D~~~~ 80 (416)
T d1d8wa_ 1 TQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQA 80 (416)
T ss_dssp CHHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCEEEEGGGGTTTCCCCC--------------CSCCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 91679999999999983988999999985484443036678765534677767776021278899889989999889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~Lipg~~~vnLH~~y~~~~~~vdrd~i~p~hf~~w~~wAk~~glglDfNpt~Fshp~~~~g~sLshpd~~iR~~wI~H~ 160 (416)
T d1d8wa_ 81 MRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHC 160 (416)
T ss_dssp HHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEEEECCCSSSGGGTTSCSTTCSSHHHHHHHHHHH
T ss_pred HHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98568998400033320258866412258574899999999749774757655578442257762588889999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~c~~I~~~~G~~~g~~~v~niWi~DG~k~~~~d~~~~R~Rl~eSLdeI~a~~~d~~~~ld~vE~K~Fg~g~esy~vgs~ 240 (416)
T d1d8wa_ 161 KASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSN 240 (416)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEECCCCEESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEECCSCBTTBCSEESSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEEECCCH
T ss_conf 99999999986300776204776577676888683159999999999998715876650454230125565035763738
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 df~~~yal~~~a~~llD~GH~hPtenI~dkisalll~~~~~~lH~sr~~rwDsDhvvi~~del~~I~~ElVr~~~ld~v~ 320 (416)
T d1d8wa_ 241 EFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVH 320 (416)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCTTCCHHHHHHHHTTTSSCEEEEECBCSSSSCCBCCCSSHHHHHHHHHHHHTTGGGTEE
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 88998763489679986798787665999999999727542576388856677612036489999999999645544422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~LD~fdasinrI~a~v~g~rn~qka~l~ALL~p~~~L~~~q~~gD~t~rla~~Ee~K~~P~~avW~~~c~r~~vp~~~~ 400 (416)
T d1d8wa_ 321 IGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAPGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSE 400 (416)
T ss_dssp EEECCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHHHHHTTSCHHHHHHHHHHHTTCCCSTT
T ss_pred ECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 30023422466199999999999999999976899999999986799999999999851981889999999739998768
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
=
T Consensus 401 ~~~~v~~Ye~~v~~kR 416 (416)
T d1d8wa_ 401 WLESVRAYEKEILSRR 416 (416)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 8999999999885349
|
| >d2vnud4 b.40.4.16 (D:495-910) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exosome complex exonuclease RRP44 species: Saccharomyces cerevisiae [TaxId: 4932]
Probab=100.00 E-value=0 Score=31426.04 Aligned_cols=1 Identities=0% Similarity=-1.889 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisi~~~~~g~~~l~VHIADva 80 (416)
T d2vnud4 1 FSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVT 80 (416)
T ss_dssp CCHHHHTTSCTTGGGCCCCSSTTCHHHHHHCGGGGGSEECTTSCCEEEESSSCCCCCEEEEEEECTTSCEEEEEEEECHH
T ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHH
T ss_conf 98789964432368643764453122115752323771177898799769999546565899995899599999983578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~v~~~s~Ld~~A~~R~~t~Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~~~~~g~i~~~~~~~s~I~~~~~ltY 160 (416)
T d2vnud4 81 HFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSY 160 (416)
T ss_dssp HHSCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHTTTSSCCBTSEEEEEEEEEEECTTCCEEEEEEEEEEEEBSEEEEH
T ss_pred HHHCCCCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEHHHHCCCCCCCH
T ss_conf 86299998999999848037589971144788886545205698202467765540210144420332012033322321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~ev~~~l~~~~~~~~~~~~l~~L~~~a~~l~~~R~~~g~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~s~~lVeE~Mi~A 240 (416)
T d2vnud4 161 EQAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLA 240 (416)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCEEEEECSSSSCEEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 66788751354321000678999999999999998568754578742799423335565431122242014078776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 N~~vA~~l~~~~~~~~~~R~h~~p~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~~~~~ 320 (416)
T d2vnud4 241 NISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMM 320 (416)
T ss_dssp HHHHHHHHHHHCTTTCEEEEBCCCCGGGGHHHHHHHHHHHSCCCCCSCHHHHHHHHHTCCBTTBTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 08999999984788876400079997999999999997012676865225578999987475672699999999887788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~a~~~~~~~~s~~~~~H~gLgl~~YthfTSPIRRY~DLv~hrqL~a~l~~~~~~~~~~~~e~l~~i~~~~~~~e~~a~~a 400 (416)
T d2vnud4 321 AAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFA 400 (416)
T ss_dssp CCEEEEGGGSCGGGGCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHTTSSCCCGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87763015579976273765722015168677637899999999999737999977443999999999999999999999
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
-
T Consensus 401 er~~~~~~~~~~lk~~ 416 (416)
T d2vnud4 401 GRASIEYYVGQVMRNN 416 (416)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999997578
|
| >d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31423.44 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~~~~~v~~~~~~w~~pRw~~ikR~Yta~dV~~lRgs~~~~~~~a~~~A~kL~~lL~~~~~~~~v~~lGa~d~~~A~~~~ 80 (416)
T d1igwa_ 1 KTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQA 80 (416)
T ss_dssp CCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
T ss_conf 96799999999986696515689998999999966985876837899999999998604445706547757799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 kaGf~aiYvSG~~~sA~~~~~~~~~PD~gl~~~~~v~~~~~~I~~a~~~~d~~~~~~~~~~~~~~~~d~~lPIIADaDtG 160 (416)
T d1igwa_ 81 KAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAG 160 (416)
T ss_dssp HHTCCCEEECHHHHHHHSCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTCTTCCCCCCCEEEECTTC
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 80998899646100165555678877765462889999999999988889999875200235444444310157742245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 fG~~~nv~r~vk~~i~AGaagihiEDQ~~~~KkCGHl~gK~lv~~~e~~~ki~AA~~a~d~~~~~~~IiARTDA~~a~li 240 (416)
T d1igwa_ 161 FGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLCADVTGVPTLLVARTDADAADLI 240 (416)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEESBCGGGCCCC----CEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
T ss_conf 67658999999999967871897226766430100148974678999999999999877427998279986230555444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~sd~d~~D~~fi~g~Rt~eG~yr~~~G~d~aI~R~~aya~gADli~~Et~~~~~e~a~~fa~~v~~~~p~~~l~yn~SPs 320 (416)
T d1igwa_ 241 TSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPS 320 (416)
T ss_dssp SCCCCGGGGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC--
T ss_pred HCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCC
T ss_conf 20131115672057647343522247859999999984322667753168998999999998607876567623478887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 fnw~~~~~~~~~~~~~~eL~~lGy~~~~~~la~~ha~~~a~~~l~~~~~~~~gm~ayv~~~Q~~E~~~~~~g~~~~~hQ~ 400 (416)
T d1igwa_ 321 FNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQ 400 (416)
T ss_dssp --------------HHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTHHHHHHHHTTTCCTTSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 67201235567999999999659888996768999999999999999863498899999875898887744863020886
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
-
T Consensus 401 ~~G~~y~D~~~~~~~g 416 (416)
T d1igwa_ 401 EVGTGYFDKVTTIIQG 416 (416)
T ss_dssp HTTHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHCC
T ss_conf 7542489999987169
|
| >d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: Isocitrate dehydrogenase, ICDH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31422.47 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~IavipGDGIGPEV~~ealkVL~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~ 80 (416)
T d1pb1a_ 1 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQ 80 (416)
T ss_dssp CCCCCCCCSSCBCCEEETTEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCSHHHHHHHCT
T ss_pred CCCCCCCCCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
T ss_conf 99752279998679977998818999889998988624999999999999999874268985589998235799998499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~lp~~t~~~~~~~da~l~Gav~~P~~~~~~~~~l~lR~~ldlyanvRP~r~~pg~~spl~~~~~iD~vIvREnteG~Y 160 (416)
T d1pb1a_ 81 DVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 (416)
T ss_dssp TCSSCHHHHHHHHHHSEEEECCCCCCSSSCCCCHHHHHHHHTTCCEEEEEEECCTTCCCSSSCGGGCEEEEEEECSSGGG
T ss_pred CCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 77799999999985498952886699988876667889987486474132002678886434556446599861134422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~t~~~~~Ri~r~AF~~A~~~~r~~vt~v~Kanvl~~~~gl 240 (416)
T d1pb1a_ 161 AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA 240 (416)
T ss_dssp GCCEECTTCHHHHHHHHHHHHTSCCCCCSCCSSCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
T ss_conf 45033456520688998766530530113653036765402122228999999999996699968999789765401678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 f~~~~~e~a~e~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~vDa~~~~lv~~P~~fdViv~~NlfGDIlSDlaa~l~Ggl 320 (416)
T d1pb1a_ 241 FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGI 320 (416)
T ss_dssp HHHHHHHHHHHHHCCEECTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCC
T ss_conf 99999999987631223344431101046676334289999999999985210467789613578777777888862376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 Gl~pSanig~~~a~fEp~HGSAPdiaGk~iANP~a~Ils~amML~~lg~~~~A~~i~~Av~~~l~~g~~T~Dl~~~~~~g 400 (416)
T d1pb1a_ 321 GIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGA 400 (416)
T ss_dssp TTCCCEEECSSCEEEECCSCCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTEECHHHHTTSSSC
T ss_pred CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 65445466877248877888615547999759299999999999987997899999999999997598124300046899
Q ss_pred ---------------C
Q ss_conf ---------------9
Q 003615 112 ---------------C 112 (807)
Q Consensus 112 ---------------C 112 (807)
-
T Consensus 401 g~~~T~e~~daI~~~l 416 (416)
T d1pb1a_ 401 KLLKCSEFGDAIIENM 416 (416)
T ss_dssp EECCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHCC
T ss_conf 7727999999999659
|
| >d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria mellonella densovirus [TaxId: 37138]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Densovirinae-like VP domain: Densovirus capsid protein species: Galleria mellonella densovirus [TaxId: 37138]
Probab=100.00 E-value=0 Score=31352.76 Aligned_cols=1 Identities=0% Similarity=-1.224 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~IpRPi~~~~~~~~tyrK~HkFltfGlA~kvi~~~~t~~t~~~~~lTTsLaeiPw~~p~~YMnpsEF~lLP~Gs~v~e 80 (415)
T d1dnva_ 1 VYIIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVNRLLTTCLAEIPWQKLPLYMNQSEFDLLPPGSRVVE 80 (415)
T ss_dssp CCCCCCCCCCCCCEECCEEEEEEEEEECCCSCCCEECSSTTTCSBEEEEEEEEECCTTBGGGTCCHHHHHTCCTTCBCCC
T ss_pred CEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCEECCHHHHHHCCCCCEEEE
T ss_conf 93746676778886799965446776200121001456662023232210151160345525248878710689866889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~vkvv~rn~RiAFeTnSS~T~lATLNQnk~~~~A~GLN~~~~G~nr~~T~f~s~epMiPt~t~~~~y~~v~~~~~y~~~ 160 (415)
T d1dnva_ 81 CNVKVIFRTNRIAFETSSTVTKQATLNQISNVQTAIGLNKLGWGINRAFTAFQSDQPMIPTATTAPKYEPVTGDTGYRGM 160 (415)
T ss_dssp EEEEEEEEEEEECCCCSCTTSCCCCSCCCCEEEEESTHHHHTTCBCCCCCCCCSSSCCSCCCCCCCCSSEECSSSCEECH
T ss_pred EEEEEEEECCEEEEEECCCCCCCEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77899984670577755763101001022330110100302454213654556888745667786522355654689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~~~YG~~~~n~~~~~~~~~~P~hq~g~~~~L~nYfc~~~~~~~~tgGwpcl~~hi~e~da~~~~g~~vl~~~YkPk~g~ 240 (415)
T d1dnva_ 161 IADYYGADSTNDTAFGNAGNYPHHQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVTYKPKMGL 240 (415)
T ss_dssp HHHHHCCCSSCTTSSSSSSSCCGGGGCCEEECCCEEEECCBSSSSCCCCCCGGGGSEECCTTTTTTSBCCCCEECCSSCB
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf 99974766678633457777875672772110002577652046889836789998750256678857888852776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ik~P~~~~i~g~p~~~g~~sv~~n~~~~~~a~~~~~~~at~n~s~s~~nl~~~fp~~~~~iyt~IEKsQ~~~~G~~g~~~ 320 (415)
T d1dnva_ 241 IKSPLNYKIIGQPTVKGTISVGDNLVNMRGAVVTNPPEATQNVAESTHNLTRNFPADLFNIYSDIEKSQVLHKGPWGHEN 320 (415)
T ss_dssp CSCCCCBCCCCCTTBTTBBSCCCCCCCSCCSCEECCCCCBCSSSCBCCCCCEECCCCCCCCCSSCTTSSBSCCTTTCCCT
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCC
T ss_conf 46743354336655332120010044225765478255443321200204315884103023422133402126766668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 p~iQPSlHIGv~pVPaLTTa~l~~~~~~~~n~TDt~~ywdV~~~~~V~~~~Pt~~P~~~~~nv~~~~~~y~~nl~~~~~t 400 (415)
T d1dnva_ 321 PQIQPSVHIGIQAVPALTTGALLINSSPLNSWTDSMGYIDVMSSCTVMEAQPTHFPFSTEANTNPGNTIYRINLTPNSLT 400 (415)
T ss_dssp TCCCCCCCCCCEEEEECCBCCCCSSCCSCCCBCCEEEEEEEEEEECCEECCCCCSTTCCSCCBCTTTCCCCCCCSSCSSC
T ss_pred CCCCCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 75376246332204400113223378776762202589999988999855886544556678883303230446765556
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
-
T Consensus 401 s~~~GlY~~~~~~~~ 415 (415)
T d1dnva_ 401 SAFNGLYGNGATLGN 415 (415)
T ss_dssp SSSCCSSSCCSSCCC
T ss_pred CCCCCEEECCHHCCC
T ss_conf 521212641110379
|
| >d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: TK-like PP module domain: Pyruvate dehydrogenase E1 component, PP module species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31350.52 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~e~~~~~~iR~~~~~~v~~a~~~~~~~GGH~g~~ls~~~l~~vl~~~~~~~p~~~~~d~ 80 (415)
T d2ieaa2 1 ISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGD 80 (415)
T ss_dssp CCCSSCSSCGGGCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCCHHHHHHHHHHHHHHHHTCCCCCSSSCCC
T ss_pred CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99853688854368999889999999999999999999982678998898254679999999999985148987688887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ilskGHas~~lYa~l~~~g~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~a~~~ 160 (415)
T d2ieaa2 81 LVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRG 160 (415)
T ss_dssp EEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79835750299999999839875035777753135789898888777888776798202157899999999987876530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~gDg~~~eg~~~ea~~~a~~~~l~nl~~i~d~N~~~~~~~~~~~~~~~~~~~~~~~~~gw~v~~~~~~ 240 (415)
T d2ieaa2 161 LKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWG 240 (415)
T ss_dssp SCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBC
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 23578842899954320023899999988887288808999967863356671014311488999998648626874031
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~d~~~al~~~~~~~v~g~~~~~~~~~ga~~~~~~~~~~~~~~~l~~~l~~~~~~~l~~dGHd~~~l~~a~~~ 320 (415)
T d2ieaa2 241 SRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKK 320 (415)
T ss_dssp GGGHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTGGGSHHHHTTSTTSCHHHHTTCCBGGGCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 02444320102434334121033431100002441566665303421046787663131455665315740446899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ak~~~d~P~vI~a~TiKGkGlp~A~e~~n~~H~~kkl~~Ee~~~~r~rl~~pl~d~~~e~~pf~~p~~~s~e~~~l~err 400 (415)
T d2ieaa2 321 AQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQR 400 (415)
T ss_dssp HHHCCSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHHHTTCSCCHHHHTTCCCCCCCTTSHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98658996289973523368874334621012788899999999999839999813443179778888889999999999
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
.
T Consensus 401 ~~Lgg~lP~r~~~~~ 415 (415)
T d2ieaa2 401 QKLHGYLPSRQPNFT 415 (415)
T ss_dssp HTTTSCSSCCCSSCC
T ss_pred HHHCCCCCCCCCCCC
T ss_conf 984898876787889
|
| >d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31349.71 Aligned_cols=1 Identities=0% Similarity=-1.855 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~l~~l~~W~Fd~f~l~~~~~~~~~~~L~~~~~~lf~~~gl~~~f~i~~~~l~~Fl~~v~~~Y~~nPYHN 80 (415)
T d1so2a_ 1 LDLILVEEYDSLIEKMSNWNFPIFELVEKMGEKSGRILSQVMYTLFQDTGLLEIFKIPTQQFMNYFRALENGYRDIPYHN 80 (415)
T ss_dssp CCSHHHHHHHHHHHHHTSTTCCHHHHHHHHGGGGGGHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHTTSCSCSSSS
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 96110688999997224689882020155212334489999999999778377529899999999999998579998827
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~HA~dV~q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lE~~alliAA 160 (415)
T d1so2a_ 81 RIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDESYGCLSSNIPALELMALYVAA 160 (415)
T ss_dssp HHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCCTTCCCSSTTEECGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 89999999999999956554422111222233221111222332100122222333322201565408999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~HDvdHpG~nN~Flv~t~~pLA~lYnd~SVLEnhH~a~a~~lll~~~~~nil~~l~~~e~~~~r~lii~~ILATDm~~H 240 (415)
T d1so2a_ 161 AMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKH 240 (415)
T ss_dssp HHTTTTCCSCCHHHHHHTTCHHHHHTTTSSHHHHHHHHHHHHHHHTCGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 97226999966889987188789985898888999999999999648542143069999999999999999970464567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 f~~l~~f~~~~~~~~~~~~~~~~~~~r~lv~~~lik~ADIs~~~rp~~v~~~W~~~l~~EF~~QGd~E~~lglp~sp~~D 320 (415)
T d1so2a_ 241 FDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMD 320 (415)
T ss_dssp HHHHHHHHHHHTSSSCCCCCTTCHHHHHHHHHHHHHHHHTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999998740047767787888999999999998624744582889999999999999987799866999985668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 R~~~~~~k~QigFi~~iv~PLf~~l~~a~~~~~~~~~~~~~n~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (415)
T d1so2a_ 321 RSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWLEAEEDNDTESGDDEDGEELDTEDEEMENNLNPKPPRRKSRRRIF 400 (415)
T ss_dssp TTSCCHHHHHHHHHHHTHHHHHHHHHHTTCSCCEECC-------------------------------------CCSSEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 66564157899999998999999999983255999999998898778757664134400015554455776056677776
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
=
T Consensus 401 ~~~~~~l~en~~~w~ 415 (415)
T d1so2a_ 401 CQLMHHLTENHKIWK 415 (415)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 689999986255129
|
| >d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=31349.39 Aligned_cols=1 Identities=100% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~ktl~d~~~~~K~VlvRvD~NvPi~~g~I~d~~RI~~~~pTi~~ll~~~akvvl~SH~GRPkg~~~~~~~~~~~~~~~~ 80 (415)
T d16pka_ 1 EKKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
T ss_dssp CBCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCCT
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99741013878998999934675555995897388999999999999788979999058998987555322222223312
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~sL~~~a~~L~~~l~~~V~f~~~~~~~~~~i~~l~~g~i~LLEN~Rf~~eE~~~~~~~~~~fak~LA~laDiyVN 160 (415)
T d16pka_ 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVVSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYIS 160 (415)
T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHHHHTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 36833473889999998758674234431024456650577416874200024532322122138999998722868994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 DAFg~sHR~haS~~Gi~~~lps~~gg~L~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~~i~~l~~k~D~iligG~~a 240 (415)
T d16pka_ 161 DAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMA 240 (415)
T ss_dssp ECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHH
T ss_pred CCCCHHHCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH
T ss_conf 56202204675122200014224678999999999999970977551899853653437999998885365565322188
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ntfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d16pka_ 241 YTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEK 320 (415)
T ss_dssp HHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999809805544304443212666522321151678511203303101334443112222234543777787776667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~I~~AktI~wNGP~GvfE~~~F~~GT~~l~~~ia~~t~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~ 400 (415)
T d16pka_ 321 YVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLEL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTTTSSEECSCHHHHHHH
T ss_pred HHHHHHHHCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHH
T ss_conf 76766513569996653213155151799999999998413479989987789999999719735870798778999999
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
=
T Consensus 401 L~G~~LPgi~aL~~k 415 (415)
T d16pka_ 401 LEGKTLPGVTVLDDK 415 (415)
T ss_dssp HTTCCCHHHHTSCBC
T ss_pred HCCCCCCHHHHHHCC
T ss_conf 879996257785069
|
| >d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31348.39 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~kltl~d~dl~gK~VlvRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~~ak~vIL~SH~GRP~g~~~~~~Sl~~va 80 (415)
T d1qpga_ 1 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVA 80 (415)
T ss_dssp CTTSBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHH
T ss_pred CCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH
T ss_conf 98666850322757998999932467643997896789999999999999879988999624899999879776869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~I~LLENvRF~~eE~~~~~~~~~~~~~~~~n~~~fak~La~laDiyVN 160 (415)
T d1qpga_ 81 KELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYIN 160 (415)
T ss_dssp HHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99985319846984577776311012334467579942111143310246543011100100269999987547848996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 DAFg~aHR~haS~~g~~~~~s~aG~lmekEl~~L~~~l~~p~rP~vaIlGGaKvsdKi~vl~~l~~k~D~iiigG~mant 240 (415)
T d1qpga_ 161 DAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFT 240 (415)
T ss_dssp CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf 55011100565423455785633288999999999996499998599995476442899998787535557751103577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 flk~~~g~~ig~s~~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d1qpga_ 241 FKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKL 320 (415)
T ss_dssp HHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 88760377666531122211023689999876598675512278730245555531230013558765123466046789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~I~~a~tI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L 400 (415)
T d1qpga_ 321 FAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
T ss_conf 99875368679997774152465240689999999997215798299957899999997598568806967789999998
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
=
T Consensus 401 ~G~~LPgi~aL~~~k 415 (415)
T d1qpga_ 401 EGKELPGVAFLSEKK 415 (415)
T ss_dssp TSCCCHHHHTSCBCC
T ss_pred CCCCCCHHHHHHHCC
T ss_conf 799970798885288
|
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uncharacterized protein BH0493 species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=31344.18 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~s~~~ia~~L~~~i~~~PIID~H~HL~p~~~~~~~f~~~~~l~~~hyyk~r~mr~~gv~e~~itg~~~~~~~~~~~~~ 80 (415)
T d2qeec1 1 SINSREVLAEKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEE 80 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHSCEEECSCSCCCGGGGGGSBCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
T ss_conf 97458999999999975898868888969778511677881888431799999998539998980789847889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~p~~~w~~~~l~~~~~l~~~~~~~~~~~i~~~~~~~~~e~~~r~ll~~~nVe~v~tTDdP~D~L~~H~~~~~~~~ 160 (415)
T d2qeec1 81 LFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDTVLQLANVSDVVMTNDPFDDNERISWLEGKQP 160 (415)
T ss_dssp HTTSSCCCSHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHTCCHHHHHHHHHHHTTEEEEECCBCTTCHHHHHHHHTTCCC
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 97428935899999888852567666767899999999762511179999998282035213797321899998604688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~v~ptfRpD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (415)
T d2qeec1 161 DSRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPEESNRGRIIR 240 (415)
T ss_dssp CTTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHHHHCCSCEEEEECTTCCSSCSSHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 75223002479886321007899999886145644576799999999999987325688885687788677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~~~~e~g~~mQlH~Ga~Rn~n~~~~~~g~~~g~~~~~~L~~ll~~~~~~k~il~~l~~~~~~e~a~lag~f~~v~l 320 (415)
T d2qeec1 241 DCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLREYPNNKFLVTMLSRENQHELVVLARKFSNLMI 320 (415)
T ss_dssp HTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHHHCTTSCEEEEECCGGGHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 99999987569817873376667773103478775767999999999848998879996896538999999853887067
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 gg~WWf~d~~~gm~~~l~~~~e~~~~~fvg~~TDsRsf~~~~~rheyfRRil~~~L~~~v~d~v~~g~~~~~~~l~~~v~ 400 (415)
T d2qeec1 321 FGCWWFMNNPEIINEMTRMRMEMLGTSFIPQHSDARVLEQLIYKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRDVA 400 (415)
T ss_dssp BCCCGGGCSHHHHHHHHHHHHHHHTTCSBCCCCCCSBTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 77016636899999999999874400112254586644303378999999999999999999973689997999999999
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
=
T Consensus 401 dI~y~Na~~yfg~~~ 415 (415)
T d2qeec1 401 DLFSRNFWRFVGRND 415 (415)
T ss_dssp HHHTHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999828899
|
| >d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=31343.19 Aligned_cols=1 Identities=100% Similarity=0.836 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~iP~k~~~~~~~~~~~~~~~~~~~~y~Gg~V~~P~~G~~~~V~~lDf~SLYPSii~~~Ni~ 80 (415)
T d1s5ja2 1 EISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGKGYKGAVVIDPPAGIFFNITVLDFASLYPSIIRTWNLS 80 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTBCCCCHHHHHHTTCC--------------CCCCCCCSEEEEEEEEEEETTHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCC
T ss_conf 96489999999999977985789742245453201110034577387387079987657647878345339999996889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~R~~~~~~~~k~~~~~~~~~~~~d~~Q~A~Ki~~NS~ 160 (415)
T d1s5ja2 81 YETVDIQQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLRDFRVKIYKKKAKNPNNSEEQKLLYDVVQRAMKVFINAT 160 (415)
T ss_dssp TTTBSCSCCSSCCEECCSSSCCCEEBCCSSCCHHHHHHHHHHHHHHHTHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30237534578765445799745786378887427899999999987420021123442268888788999999877777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 YG~~G~~~~~~~~~~~A~~iT~~GR~~i~~~~~~~~~~g~~viygDTDSv~v~~~~~~~~e~~~~~i~~~~~~~le~e~~ 240 (415)
T d1s5ja2 161 YGVFGAETFPLYAPRVAESVTALGRYVITSTVKKAREEGLTVLYGDTDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKT 240 (415)
T ss_dssp HHHHHSTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEESCCHHHHHHHHHHHHHHSSCCEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 77775466442328999899999999999888876605962466423314896288753999999987332212554425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~KKrY~g~~~dgkl~~kGie~vRrd~~~~~k~~~~~vl~~il~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ 320 (415)
T d1s5ja2 241 YKFVAFSGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFNEVKELMISINSPNDVKEIKRKIVDVVKGSYEKLKNKG 320 (415)
T ss_dssp EEEEEEC----CEEEECSSSCCCEESCCC--------CCSHHHHHHHHHHTTCCSCCTTHHHHHHHHHHHHHHCTTC---
T ss_pred EEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51664431033203220255400110000356537889999999999997169878888878899999999999986079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 i~~~dl~~~k~l~k~~~~Y~~~~p~hv~~A~~l~~~g~~~~~GdrI~YViv~~~~~~~p~~~~~~~~iD~~yYi~~l~~p 400 (415)
T d1s5ja2 321 YNLDELAFKVMLSKPLDAYKKNTPQHVKAALQLRPFGVNVLPRDIIYYVKVRSKDGVKPVQLAKVTEIDAEKYLEALRST 400 (415)
T ss_dssp -------------------------------------------------------------------CCSSTTHHHHHTT
T ss_pred CCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 78688202320146734311799389999999985599999989899999947999882220357998889999999999
Q ss_pred --------------C
Q ss_conf --------------9
Q 003615 112 --------------C 112 (807)
Q Consensus 112 --------------C 112 (807)
-
T Consensus 401 l~~il~~~g~~~~el 415 (415)
T d1s5ja2 401 FEQILRAFGVSWDEI 415 (415)
T ss_dssp STTHHHHHSCCCCCC
T ss_pred HHHHHHHHCCCHHHC
T ss_conf 999998628994439
|
| >d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Flavocytochrome b2, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31276.93 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~aFd~i~l~Pr~L~dvs~i 80 (414)
T d1kbia1 1 APGETKEDIARKEQLKSLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKV 80 (414)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCGGGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSC
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC
T ss_conf 99885444556777631599812167999999999986888888887146665099999999997360665335787678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Dlst~~lG~~l~~P~~Isp~g~~~~~~~~~~~~~~A~a~aa~~~~~~~~ls~~~~~~~~~~~~~a~~~~~~~~~q~y~~~ 160 (414)
T d1kbia1 81 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNS 160 (414)
T ss_dssp BCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCS
T ss_pred CCCEEECCCCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCC
T ss_conf 88534898417888788745640456822367887764777641365322322346568899872177541011021124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~l~~ra~~ag~~al~~tvD~~~~g~re~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~i~~ 240 (414)
T d1kbia1 161 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEE 240 (414)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 58889999999987188510123344324651787872556654331444203554553277899985066899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~~~~~~~~i~kgi~~~~da~~~~~~G~~~i~vsnhggr~~d~~~~~~~~l~~i~~~~~~~~v~~~~~viadGGIR~G~D 320 (414)
T d1kbia1 241 LKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTD 320 (414)
T ss_dssp HHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHH
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 86157752775200006777788743886245223211111112200000024666664111488513885388676789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 VaKALALGAdaVgigrp~L~~la~~G~egv~~~l~~l~~EL~~~M~l~G~~si~eL~~~~l~~~~~~~~~~~~p~~~~~~ 400 (414)
T d1kbia1 321 VLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLKARTVGVPNDVLYN 400 (414)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTTCEECCCCCCHHHH
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf 99999758998877689999998446999999999999999999998589997891998834232243367899512210
Q ss_pred -------------C
Q ss_conf -------------9
Q 003615 112 -------------C 112 (807)
Q Consensus 112 -------------C 112 (807)
.
T Consensus 401 ~~~~~~~~~~~~~~ 414 (414)
T d1kbia1 401 EVYEGPTLTEFEDA 414 (414)
T ss_dssp HHCCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCC
T ss_conf 35678775333679
|
| >d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: GckA/TtuD-like superfamily: GckA/TtuD-like family: GckA/TtuD-like domain: Putative glycerate kinase (hypothetical protein TM1585) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31276.62 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~lr~~~~~if~a~v~av~P~~~v~~~l~~~~~~~i~vvg~GKAa~~MA~~~~~~lg~~i~~g~vv~~~~~~~~~~~~i 80 (414)
T d2b8na1 1 PESLKKLAIEIVKKSIEAVFPDRAVKETLPKLNLDRVILVAVGKAAWRMAKAAYEVLGKKIRKGVVVTKYGHSEGPIDDF 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTSHHHHHHTTHHHHCCCSEEEEEESTTHHHHHHHHHHHHGGGEEEEEEEEETTCCCSCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 95689999999999998419789999847757999889999818999999999997276677059995898677888874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk 160 (414)
T d2b8na1 81 EIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRK 160 (414)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 89978999998779999999999996489887689985088540011488999999999999999858998799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvpd~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~~~~v 240 (414)
T d2b8na1 161 HLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPDSSTSEDALKVLEKYGIETSESVKRAILQETPKHLSNV 240 (414)
T ss_dssp TTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSCCSSE
T ss_pred HHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98753662799971558568999805889981312048867899888999999998398777689986513578433454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~ii~~n~~al~aa~~~a~~~G~~~~~~~~~l~Gea~~va~~~a~~~~~~~~~~~~~~~p~~li~GGEtTV~v~g~G~G 320 (414)
T d2b8na1 241 EIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEAREAGRFIASIMKEVKFKDRPLKKPAALIFGGETVVHVKGNGIG 320 (414)
T ss_dssp EEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHHCCSSCSSEEEEEEECCBCCCCSCCCC
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCC
T ss_conf 13895689999999999998749943995342457689999999999999985278888974899756568870689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 GRNqElaL~~a~~l~~~~~~~~ls~gTDG~DGptdaAGAivd~~t~~~~~~~gld~~~~L~~~DS~~f~~~~~~li~TGp 400 (414)
T d2b8na1 321 GRNQELALSAAIALEGIEGVILCSAGTDGTDGPTDAAGGIVDGSTAKTLKAMGEDPYQYLKNNDSYNALKKSGALLITGP 400 (414)
T ss_dssp CHHHHHHHHHHHHTTTCTTEEEEEEETTSCCSSSSCCEEEEETTHHHHHHHTTCCHHHHHHTTCHHHHHHHTTCEECCCC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCEECCCC
T ss_conf 64399999999983699996999975478878988775887662799999869999999987786999997699786199
Q ss_pred -------------C
Q ss_conf -------------9
Q 003615 112 -------------C 112 (807)
Q Consensus 112 -------------C 112 (807)
-
T Consensus 401 TgTNV~Dl~i~li~ 414 (414)
T d2b8na1 401 TGTNVNDLIIGLIV 414 (414)
T ss_dssp CSCCCCEEEEEEEC
T ss_pred CCCCHHHHEEEEEC
T ss_conf 99656350777969
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31271.46 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 97999999999999998629999999999999999997699999999999865886041177787874249999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~ 160 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAI 160 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCHHEECCCCHHCCCCCCCCCCCCHHHHHH
T ss_conf 99999865511233443344332101211221232012315717776514101001365201045600011002034677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~ 240 (414)
T d1o20a_ 161 REALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240 (414)
T ss_dssp HHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCCHHHHH
T ss_conf 76543212432124555543103444123334358699746079999876540344021046987871053335434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~FgPvl~v~~~ 320 (414)
T d1o20a_ 241 PVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVV 320 (414)
T ss_dssp HHHHHHHHSCTTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCSSEEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCEEEEEEEEEEEE
T ss_conf 68875441378643355522010889999999986899976986555465542110000002456770220037999994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t 400 (414)
T d1o20a_ 321 KNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELT 400 (414)
T ss_dssp SSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGE
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHC
T ss_conf 99999999985589998179995899999999983981499991898688888879978156249989987456799849
Q ss_pred -------------C
Q ss_conf -------------9
Q 003615 112 -------------C 112 (807)
Q Consensus 112 -------------C 112 (807)
=
T Consensus 401 ~~K~vv~~~~~~~~ 414 (414)
T d1o20a_ 401 TYKFVVLGEYHVRE 414 (414)
T ss_dssp EEEEEEECSSCCCC
T ss_pred EEEEEEECCCCCCC
T ss_conf 57799987875378
|
| >d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31270.34 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~iV~l~GDE~tr~i~~~i~~~~~~~~~di~~~~~d~G~e~~~~tg~~l~~daieaik~~~v~lkG~~~tP~~ 80 (414)
T d1t0la_ 1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDE 80 (414)
T ss_dssp CCCCEEEEEEEEEECCHHHHHHHHHHHHHTTTTTEEEEEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 98643368779956718999999999999707897752799826789998629967799999998669886678679873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~s~n~~lR~~~~~~~~~rp~~~~~~~~~~~~~~~d~vvvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (414)
T d1t0la_ 81 KRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSD 160 (414)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECC
T ss_conf 33330012211010028889862765231126864899876787674367404554425436899779860689985046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~a~~~a~~~r~~v~~~~K~nv~~~t~glfr~~~~eva~~yp~~~~~ 240 (414)
T d1t0la_ 161 GTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFE 240 (414)
T ss_dssp CSCCEEEEEEEECSCCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCEEECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 65310000123467784268776205566788889999998469735875035614445288999999999876330134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~v~~~~~~~Da~~~~~~~~p~fdVivt~NLfGDILSDl~a~l~GglGl~pSanig~~~~~~~fe~~hg~aP~hGsapd 320 (414)
T d1t0la_ 241 AQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQ 320 (414)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf 32025666677789874148988728997674530566566562577431210115764334412355555543221001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 iAGk~iANP~A~ILS~amML~~lg~~d~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~lsT~ef~da 400 (414)
T d1t0la_ 321 KGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDK 400 (414)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHSCGGGCCGGGCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 37766539099999999999985265643689999999999999999679988231877666665556676589999999
Q ss_pred -------------C
Q ss_conf -------------9
Q 003615 112 -------------C 112 (807)
Q Consensus 112 -------------C 112 (807)
-
T Consensus 401 vi~~L~~~l~~~~~ 414 (414)
T d1t0la_ 401 LGENLKIKLAQAKL 414 (414)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999998865659
|
| >d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Stabilizer of iron transporter SufD family: Stabilizer of iron transporter SufD domain: Stabilizer of iron transporter SufD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31198.89 Aligned_cols=1 Identities=0% Similarity=-0.359 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~GlPt~k~E~WKyT~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivf 80 (413)
T d1vh4a_ 1 NALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVF 80 (413)
T ss_dssp CHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHCCCCCSEEEEE
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE
T ss_conf 97899999998628846299999999999729889987281479879974357765677668002000234568548999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 vnG~~~~~ls~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~LN~a~~~~g~~I~V~~~~~~~~PI~i~~~~~~~~~~~~~~ 160 (413)
T d1vh4a_ 81 VDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNT 160 (413)
T ss_dssp ETTEECGGGSCCCTTSSCEEEEESCCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEE
T ss_pred ECCEECHHCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCC
T ss_conf 89998210056755577288515755404110110012332321025432674125357604541467503644344333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~r~~I~v~ena~v~iiE~~~~~~~~~~~~n~~~ei~l~~nA~l~~~~iq~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 240 (413)
T d1vh4a_ 161 AHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLL 240 (413)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEECTTCEEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHCCCCCCCCCEECCEEEEEECCCCEEEEHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC
T ss_conf 11145653055202211121145544100002205899526642430334442233421220112003454146532000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 G~~~~r~~~~~~L~G~~a~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~A~~t~a 320 (413)
T d1vh4a_ 241 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDG 320 (413)
T ss_dssp CCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEE
T ss_pred CCCHHHCCCHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHH
T ss_conf 21100110000112000110011023466422433222320155542041343124666640488653035655225665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~q~~~~llls~~a~~~s~P~Lei~~ddv~~~Hgatvg~id~~~lfYL~sRGi~~~eA~~ll~~gF~~~~~~~~~~~~~~~ 400 (413)
T d1vh4a_ 321 QMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQ 400 (413)
T ss_dssp EEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHCCCCCCEEEECCEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 77665301567744875522899639816994000467898999999976999999999999998999998698299999
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
-
T Consensus 401 ~~~~~i~~~l~~~ 413 (413)
T d1vh4a_ 401 QVLARIGQRLPGG 413 (413)
T ss_dssp HHHHHHHTTSTTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999872489
|
| >d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Bacillus caldotenax [TaxId: 1395]
Probab=100.00 E-value=0 Score=31198.71 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~f~~~~~~~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 1 EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp CCCCCCCCSSCCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 98427705889999888999999999865998589967787489999999999739998999489999999999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~v~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~vIVv~~~a~~~~l~~p~~~~~~~l~l 160 (413)
T d1t5la1 81 PHNAVEYFVSYYDYAQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSL 160 (413)
T ss_dssp TTSEEEEECCGGGTCCCSEEETTTTEEECCCSCCCHHHHHHHHHHHHHHHHCSCEEEEECGGGGSCCCCHHHHHHTSEEE
T ss_pred CCCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEE
T ss_conf 87745432421211442014743443322345677788888766655203567714653000253257857843105898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~G~~i~~~~l~~~L~~~GY~r~~~V~~~GeFsvRG~IiDIfp~~~~e~PvRIEffgDeIesIr~Fd~~tQrs~~~~~~v 240 (413)
T d1t5la1 161 RVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREHV 240 (413)
T ss_dssp ETTCSCCHHHHHHHHHHTTCEECSSSCCTTEEEECSSEEEECCTTCSSEEEEEEESSSSEEEEEEEETTTCCBCCCCSEE
T ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHHHCCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCCCCEE
T ss_conf 66862528899999998435103100000205775351642478533564030650301103551135457211243179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~I~Pa~e~i~~~~~~~~a~~~i~~el~~~~~~~~~~~~~~ea~rl~~~~~~d~e~l~e~~~~~gie~y~~~~~~r~~~~~ 320 (413)
T d1t5la1 241 AIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGST 320 (413)
T ss_dssp EECCSSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTCC
T ss_pred EEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 96346036269999999999999999999999987785889999998767579999852764444555443204666688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~tLlDY~~~d~l~~iDE~~~~~~q~~~~~~~~~~r~~~l~e~G~~LP~a~dn~pL~~ee~~~~~~~~i~vsatP~~~e~ 400 (413)
T d1t5la1 321 PYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYEL 400 (413)
T ss_dssp CCCHHHHSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHHTSSCGGGGGSSCCCHHHHHHHCSEEEEEESSCCHHHH
T ss_pred CCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHH
T ss_conf 73244104787089993626569999999988899899888651657556557976889999864987999579970557
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
=
T Consensus 401 ~~~~~~v~q~irp 413 (413)
T d1t5la1 401 EHSPGVVEQIIRP 413 (413)
T ss_dssp HHSSSCEEECCCT
T ss_pred HHCCCEEEEEECC
T ss_conf 7468846886286
|
| >d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31195.11 Aligned_cols=1 Identities=0% Similarity=0.304 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~ltl~d~d~~gK~VllRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~gak~Vvl~SH~GRP~~~~~~d~~SL~pva~~ 80 (413)
T d1hdia_ 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE 80 (413)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCCSSCCTTTSCSHHHHHH
T ss_pred CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98754102868998999931587744990897489999999999999879998999537889999977854587999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 L~~~L~~~V~f~~d~~g~~~~~~i~~l~~geilLLENvRF~~~E~~~~~~~~~~~~~~e~~n~~~f~~~La~l~DvyVND 160 (413)
T d1hdia_ 81 LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND 160 (413)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTEEECTTSCEEECCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99986886066056513556554320234317980221104211134432011000110243699999876328889953
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 AF~~aHR~haS~~gi~~~~~~~G~LmekEi~~L~~~l~~p~~P~vaIlGGaKvsdKi~vi~~L~~k~d~iiigGgmantf 240 (413)
T d1hdia_ 161 AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240 (413)
T ss_dssp CGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEECCSCSGGGHHHHHHHHTTCSEEEECGGGHHHH
T ss_pred CHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECCHHHHHH
T ss_conf 42111125762220135642116899999999876540788761699842554338999998875310154035468999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 L~a~~g~~iG~sl~e~~~~~~~~~~~~~~~~~~~~i~lp~d~~~~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~~ 320 (413)
T d1hdia_ 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY 320 (413)
T ss_dssp HHHHHCCCBTTCCCCTTGGGTHHHHHHHHHHHTCEEECCCEEEEESSSSTTCCEEEEETTTCBCTTCEEEEECHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 99715974563340322004677777789871984344541354124566555455442113588764431530236788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~I~~aktI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~a~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L~ 400 (413)
T d1hdia_ 321 SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE 400 (413)
T ss_dssp HHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCTTTSSEECSCHHHHHHHHT
T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
T ss_conf 88761587799988834566761538999999999985148998999377999999974986798479278799999987
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
-
T Consensus 401 G~~LPgi~aL~~~ 413 (413)
T d1hdia_ 401 GKVLPGVDALSNV 413 (413)
T ss_dssp TCCCHHHHTSCBC
T ss_pred CCCCCHHHHHHCC
T ss_conf 9996246352049
|
| >d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase S, AMPS species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=31192.86 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~~~d~~i~r~~~~~~~~e~l~~~e~ 80 (413)
T d1zjca1 1 NYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEI 80 (413)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEEEECHHHHHHHHHHSCHHHHHHTSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCC
T ss_conf 97899999999999983068999989999567439999999999998699648995087899999871899668353202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~a~i~i~~~~p~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~a~A~~a~~~l 160 (413)
T d1zjca1 81 KSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPEL 160 (413)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCTTTTTTSCHHHHHHHHHHHHHHTHHHHHHHHTTCSCEEEEECCCHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC
T ss_conf 56679999999865884899726895242037989999999999999899999986476566999568767776645899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~e~~~~~~d~if~a~~lD~~dpv~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~gTDLt~~l~~~~~~~~~~~~~~~~~ 240 (413)
T d1zjca1 161 SVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKE 240 (413)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEETTEEEEEEECTTBCCBCSEEEGGGTS
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCC
T ss_conf 87999999999999750788051799999999999999999854072479943898407999358737716875236777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~NlP~gEvft~P~~~~~~G~i~~~~~~~~~G~~~~~i~l~f~~G~vv~~~~~~~~~~l~~~l~~d~~a~~~gE~~i 320 (413)
T d1zjca1 241 QAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVAL 320 (413)
T ss_dssp SEEESBSSCCCEEECEEEEEEEEEEECSSCEEETTEEEEEEEEEEETTEEEEEEEEESHHHHHHHHTSSGGGGSEEEEEE
T ss_pred CCCCCCCCCCCEEEEECCCCEEEEEEECEECCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 76648899800686131586137999782526298832481899989999999747659999876404866536767753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 g~n~~~~~~~~~~~~~~L~DEkgt~H~a~G~~Y~~~~~~~~~~~~~~~~~~G~n~s~~H~D~~i~~~~~~i~gv~~dG~~ 400 (413)
T d1zjca1 321 VPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSK 400 (413)
T ss_dssp CCSSSTTGGGCCCCSSHHHHTTTSCEEEEECCCGGGBTTGGGCCHHHHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCE
T ss_conf 16886543435442451587489744667756421113665578145401798676457876347871568999818978
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
-
T Consensus 401 ~~I~~~G~f~~~~ 413 (413)
T d1zjca1 401 ELVFENGNWASTF 413 (413)
T ss_dssp EEEEETTEECTTC
T ss_pred EEEEECCEECCCC
T ss_conf 8999899976769
|
| >d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein BC3205 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3205 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31192.10 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~i~~~a~pl~~~d~~~~~~DL~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~vA~E 80 (413)
T d2qgma1 1 SGQSVQKNIVKSIQSQANPLKTIEPSKPFEDLKPLKKMIGNAQYVGLGENTHGSSEIFTMKFRLVKYLVTEMGFTNFAME 80 (413)
T ss_dssp CCSSHHHHHHHHHHHHCEECCCCCTTSCCGGGHHHHHHHTTCSEEEECCSSSCBHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98427789999999846558778989876789999986479749998468667079999999999999997599789992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~d~~~~~~vn~yV~~g~g~~~~~~~~~w~~~e~~~lv~WlR~~N~~~~~~~~v~f~G~D~~~~~~~s~~~v~~yl~~~~p 160 (413)
T d2qgma1 81 EDWGNGLKLNEYIQTGKGNPREFLKLLYPTDEIIAMIEWMKDYNADPSNKKKIQFIGLDLKALDQGSFNKVIDYVRLHRP 160 (413)
T ss_dssp EEHHHHHHHHHHHHHCCSCGGGTSCTTSCBHHHHHHHHHHHHHHHCTTCCSCCEEEEEECSCCCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCH
T ss_conf 69588999999986388787887787525177999999999970458978842699744465535469999999986196
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~ 240 (413)
T d2qgma1 161 DLLAEVEENYKELSSFTGSIQEYMKLTPKLKEKFKANAERVARLLKDENEQANTEIIPSEYIWAKATASAIEKFTTMLLP 240 (413)
T ss_dssp TSHHHHHHHHHTGGGSCSCHHHHTTSCHHHHHHHHHHHHHHHHHTSCC-----------CHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78999999974603123478999775176788899999999999997676505432344899999999999999999706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~RD~~Maenl~~~~~~~~~KiivwAHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~ 320 (413)
T d2qgma1 241 NDYPSIIKLHEQYLADHAMWAQETFGGKTMVWAHNIHIAKGIIDEKLYPYVAGQFLKERLDNNYVTIGSTTTEGNFTLYS 320 (413)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHCSCEEEECCHHHHCSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCC
T ss_conf 87401377899999999999974789978999554110757565433666589999998488469999873466041257
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~~p~~~~s~e~~l~~~~~~~~~ld~r~~~~~~~~~l~~~r~~r~iG~~y~P~~~~y~~~~~~~~fDa 400 (413)
T d2qgma1 321 EYNPSTGGKITTDTIPQDVKSFNYTLGKVPYKMFLLDNRHLKGQAEKWVKAKRPLLSIGGQILPNSSVYFDTSLLEQFDI 400 (413)
T ss_dssp CC-----CCCEEEECCCCTTSHHHHHHHSSCSEEEEEGGGCCHHHHHHHHSEEEEECCCSCC-----CEEEEEHHHHCSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCHHHHCCE
T ss_conf 77875566303678999952699997135877467552004535678883711211310244588764446895997978
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
=
T Consensus 401 li~i~~ttPa~~~ 413 (413)
T d2qgma1 401 IFHIRKTSPSHIK 413 (413)
T ss_dssp EEEEEEECBCCBC
T ss_pred EEEECCCCCCCCC
T ss_conf 9997146703129
|
| >d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31192.07 Aligned_cols=1 Identities=0% Similarity=-0.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~ki~v~~pIv~l~GDeit~~~~~~i~~~l~~~~~di~~~~~d~G~~~~~~tg~~l~~eaiea~k~~~aiLkGa~~tP~ 80 (413)
T d1lwda_ 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf 99750305777995486379999999999970678886279970788999874996769999999975977788867997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~s~n~~lR~~ldl~an~RP~~~~~~~~~~~~~~~d~VivREnteg~Y~g~e~~~~~~~~~~i~~~~~ 160 (413)
T d1lwda_ 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCCCEEEEECC
T ss_conf 32235444432210001568976387458721002578876788887727752254443503423226766320577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ria~~af~~a~~~~~~vt~v~K~nvl~~~~glf~~~~~eva~~~p~~~~~ 240 (413)
T d1lwda_ 161 DGSSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFD 240 (413)
T ss_dssp TCCCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 66542233200256652000001332025678999999997159605775046356600479999999999874003564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~I~~~~~~vd~~~~~lv~~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag~~~ 320 (413)
T d1lwda_ 241 KYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQ 320 (413)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
T ss_conf 23799861455555565228988739997563405676677874389777764324787554333346566000000121
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 iagk~iANP~a~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~sT~ef~d 400 (413)
T d1lwda_ 321 KGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLD 400 (413)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 17765659599999999999973454444579999999999999999779988465887666655555677638999999
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
=
T Consensus 401 aV~~~L~~~l~~~ 413 (413)
T d1lwda_ 401 TIKSNLDRALGRQ 413 (413)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999987529
|
| >d1a0tp_ f.4.3.2 (P:) Sucrose-specific porin {Enterobacterium (Salmonella typhimurium) [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane beta-barrels superfamily: Porins family: Maltoporin-like domain: Sucrose-specific porin species: Enterobacterium (Salmonella typhimurium) [TaxId: 90371]
Probab=100.00 E-value=0 Score=31187.84 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~GfeFhGY~RsG~g~s~~g~~~~~~~~~~~~~~~~g~~gRLGNE~d~y~El~l~~~~~~~~g~~~~~~~~~a~~~~~~~d 80 (413)
T d1a0tp_ 1 SGFEFHGYARSGVIMNDSGASTKSGAYITPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTSYND 80 (413)
T ss_dssp CCEEEEEEEEEECCEETTSSCCCCCTTCSGGGGGTCCCCCTTCCCSEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCSS
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC
T ss_conf 95168527785734847898654563216565666565424664351798883457781599599999997115655578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~q~yve~~nl~~f~~~~~~a~~WaGkR~y~r~~dIhi~D~~y~~~sG~GaGieni~lG~g~~~~~~~~~~ 160 (413)
T d1a0tp_ 81 WTASTSDLNVRQAFVELGNLPTFAGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKWNDGLRSNFSLYGR 160 (413)
T ss_dssp CCGGGCCCEEEEEEEEEESCTTCCGGGTTCEEEEEEEECTTCEEEGGGTEEEEBCEEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCCCCHHEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECEEEEECCCCCEEEEEEEEC
T ss_conf 75666530110303464586434677998639744420366567542310468658857564721037884688999942
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~G~~~G~nk~~ 240 (413)
T d1a0tp_ 161 NFGDIDDSSNSVQNYILTMNHFAGPLQMMVSGLRAKDNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTA 240 (413)
T ss_dssp EEECTTCGGGEEEEEEEEEEEEETTEEEEEEEEECTTGGGCBCSSSSBSCSSCCSEEEEEEEEEEEEESTTSSEEEEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEH
T ss_conf 56776667875111687531157379999964303773443215654346764465308999996142000358635151
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lQyg~G~~a~~~~~~~~~~~~~~~~s~Rl~~~G~~~~~~~~~~~~~~~y~~~~d~~~~~~~~~~~s~gvRP~y~~~~~~~ 320 (413)
T d1a0tp_ 241 LLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPLSENWSVAPAMLAQRSKDRYADGDSYQWATFNLRLIQAINQNFA 320 (413)
T ss_dssp EEEEEETTCSCSBTTCCTTCCTTCEEEEEEEEEEEESSSSEEEEEEEEEEEEESSSSTTCEEEEEEEEEEEEEESSSSEE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEE
T ss_conf 62375715577565787862799508999986644135876776668999851667789970799999888589668689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~E~gy~~~~~~~~g~~~~~~~~~~~~K~TlA~~~~~g~~~~fwsRPeiR~faTY~~w~~~~~~~~~~~~~~~~~~~~~ 400 (413)
T d1a0tp_ 321 LAYEGSYQYMDLKPEGYNDRQAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSG 400 (413)
T ss_dssp EEEEEEEEEEEEECTTGGGCCCEEEEEEEEEEEEEEESSCTTCTTCCCEEEEEEEEEEECGGGGGSCSSSSTTBTTBCSS
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 99998886640344675366666783589999763132897876779789999999805412200224565454677888
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
=
T Consensus 401 ~~~~fGvQ~E~Ww 413 (413)
T d1a0tp_ 401 GEWSFGVQMETWF 413 (413)
T ss_dssp CEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEC
T ss_conf 8789999998769
|
| >d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Glucodextranase, domain A species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31188.74 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~S~l~lk~~~~~~~~GaiiAapt~~~pe~~~~~~n~d~Yry~W~RDaa~~~~al~~~G~~~~a~~~ 80 (413)
T d1ulva1 1 PATSLTGALRTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARG 80 (413)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 98657889999999999999973468999848875888887666775689871166180599999999986998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~~~~~~~G~~~~~y~~dg~~~~~~~Q~D~~g~~l~~~~~~~~~~~~~~~~~i~~a~~~l~~~~~~~~~~lWEe~~ 160 (413)
T d1ulva1 81 VEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDETAFPILLANQIGRTDAGFYRNELKPAADYLVAAGPKTPQERWEETG 160 (413)
T ss_dssp HHHHHHHTCCTTSCCCSCBCTTSCBCCCCCBTHHHHHHHHHHHHHTCCCHHHHHHTHHHHHHHHHHHCSCBSBCTTSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999985079996056546687767776763038999999999853001678999999999999738898745454678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~T~~~~~~aL~~aa~la~~~gd~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~y~~r~~~~~~~~~~~~~~~~~ 240 (413)
T d1ulva1 161 GYSTSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGN 240 (413)
T ss_dssp BEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECST
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 85431189999999999999998398167889999999999999996018655623321011036666654320000123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~vDas~l~~~~~g~~~~~d~r~~~t~~~i~~~L~~~~~~g~~~~Ry~~D~y~~~~~g~~~~~~~i~t~W~~ 320 (413)
T d1ulva1 241 GAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDASISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPL 320 (413)
T ss_dssp TCCEEEGGGCCBGGGGHHHHTTSSCTTCHHHHHHHHHHHHHHEEEETTEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTH
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 45666677765788763112178798887899999999998546778777420024667657788887633112789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~a~~~~g~~~~A~~ll~~l~~~~~~~G~LpEqv~~~~~~~~~~~~~~~~~~sa~PlaWS~A~~i~l~~~l~~g~~~ 400 (413)
T d1ulva1 321 LSGERGEYALANGQDALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGAPV 400 (413)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999998648788999999999976687886563016788830025778999888776374789999999998669976
Q ss_pred ------------C
Q ss_conf ------------9
Q 003615 112 ------------C 112 (807)
Q Consensus 112 ------------C 112 (807)
-
T Consensus 401 ~~~~~~~~~~~~~ 413 (413)
T d1ulva1 401 ETPQNVAARYAAG 413 (413)
T ss_dssp SSCHHHHHHHTSS
T ss_pred CCCHHHHHHHHCC
T ss_conf 6762899874149
|
| >d1yzya1 c.146.1.1 (A:1-412) Hypothetical protein HI1011 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YgbK-like superfamily: YgbK-like family: YgbK-like domain: Hypothetical protein HI1011 species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=31118.47 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 i~iIADDlTGA~dt~~~~~~~G~~t~~~~~~~~~~~~~~~dvv~i~t~SR~l~~~eA~~~v~~~~~~l~~~~~~~~~~Kv 80 (412)
T d1yzya1 1 LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKY 80 (412)
T ss_dssp CEEEESSHHHHHHHHHHHHTTTCCEEEEESCCSSCCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 96895273528999999998799099971788500057899899985778999999999999999999863897158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~s~~DStlRGnig~Ei~a~~~~~~~~~~~v~PA~P~~gR~t~~G~~~v~g~pl~~t~~a~dP~tP~~~s~l~~ll~~qs~ 160 (412)
T d1yzya1 81 CSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAK 160 (412)
T ss_dssp CTTCCCCTTCTHHHHHHHHHHHHTCCCEEECCCBGGGTEEEETTEEEETTEEGGGSGGGGCSSSCCCCCBHHHHHHHHCS
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 73133777678589999999763997699946756577699998999898875676100288989775027777555237
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~~i~~~~v~~~~~~~~~~l~~~~~~~~~~vv~Da~t~~dL~~ia~a~~~~~~~~GsaGla~~l~~~~~~~~~~~~~~ 240 (412)
T d1yzya1 161 GKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSGGKKGTNAF 240 (412)
T ss_dssp SCEEEECHHHHTTCHHHHHHHHHHHHHTTCSEEEECBSSTHHHHHHHHHTTTCSEEEESHHHHHHHHHHHHTSCCGGGCC
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCC
T ss_conf 85354219988645067999999876179866998369889999999973288079954407778887512466654345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~Lvv~GS~s~~T~~Ql~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1yzya1 241 TPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIEQLYQWVIANLDSEFAPMVYATVPPDALKAIQHQ 320 (412)
T ss_dssp CCCSCCEEEEECCCSHHHHHHHHHHTTTSCEEECCHHHHHHCTTHHHHHHHHHHTTTTSSSCCEEECCCCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 78888679998267488999999998509859963899617817999999999998736997588843764555566543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~i~~~l~~~~~~l~~~~~~~lv~tGGdTa~av~~~Lg~~~l~~~~ei~pGvp~~~~~~~gl~ivtK~G~fG~ 400 (412)
T d1yzya1 321 FGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPWLKAVEEDIFLALKSGNFGK 400 (412)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEESHHHHHHHHHHHTCCEEEEEEEEETTEEEEEESSSSCEEEEECTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
T ss_conf 01677999999999999999875587869992639999999975998666757426982079766998079997898898
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
-
T Consensus 401 ~D~~~~a~~~~~ 412 (412)
T d1yzya1 401 EDFFEYAQGMFL 412 (412)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHHHC
T ss_conf 569999999759
|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Malonamidase E2 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=100.00 E-value=0 Score=31118.45 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~ls~~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~lna~~~~~~~~~~~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~ 80 (412)
T d1ocka_ 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYR 80 (412)
T ss_dssp CCCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCCCCSSSTTTTCEEEEETTBCCSSSCCCTTSGGGT
T ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 98789999999869998999999999999976961598174439860766798688879987661778974166486661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~a~~V~~L~~aGaii~gkt~~~e~~~~~~~~~~np~~~~~~~GgSSgG~aaava~g~~~~a~GsDtgGSiR~PA 160 (412)
T d1ocka_ 81 GWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPA 160 (412)
T ss_dssp TCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSCCCSCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHH
T ss_pred CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
T ss_conf 78875301477652012433000001666502566543334466666777678761111034566557654023441015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~cGi~GlKPT~G~v~~~g~~~~s~~~dt~Gp~arsv~Dl~~~l~~i~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 240 (412)
T d1ocka_ 161 AYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAE 240 (412)
T ss_dssp HHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCCCCSSCEEEECCCGGGCCCCHHHH
T ss_pred HHHCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 55302101344100123344443201111223445188999999864288721244776444334432323345106777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~a~~~L~~~G~~v~e~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 320 (412)
T d1ocka_ 241 QGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARR 320 (412)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHSGGGSCHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 78888888888764023223453102333455541125789887777640242321245544333210122210001124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~r~~~~~~~~~~f~~~D~ll~Pt~p~~ap~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~GlPvGlQiig~~~~D~~lL 400 (412)
T d1ocka_ 321 IGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGDPRYNRLWTLMGNPCVNVPVLKVGGLPIGVQVIARFGNDAHAL 400 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEESSSSSCCBGGGCCCCCCTTTHHHHHHCCCEEEEEEEEETTEEEEEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
T ss_conf 67899999999982799999689988776300045687577599999789849983668999607688889999899999
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
=
T Consensus 401 ~~A~~~E~alg~ 412 (412)
T d1ocka_ 401 ATAWFLEDALAK 412 (412)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998583
|
| >d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
Probab=100.00 E-value=0 Score=31115.77 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~ 80 (412)
T d1yaaa_ 1 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp CTTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 94734458747998699999998467898968830677748889988868999999999728654777899877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~ 160 (412)
T d1yaaa_ 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC
T ss_conf 99999723447665666526871442046799999987503899877246435740679999859910105633334344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1yaaa_ 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCC
T ss_conf 21101000124578751799944899985445899999999866114887974520010000588656524432223212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 320 (412)
T d1yaaa_ 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 46887599982577645676760799975056666788888888889999987736797688999999706847789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l 400 (412)
T d1yaaa_ 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHH
T ss_conf 89999999999999999999997289888753689952798229699999999996788878988798515988889999
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
-
T Consensus 401 ~~ai~~v~k~~~ 412 (412)
T d1yaaa_ 401 AKAIDEVVRFYA 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999998509
|
| >d1rxxa_ d.126.1.4 (A:) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=31114.53 Aligned_cols=1 Identities=0% Similarity=-1.092 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~v~sE~g~Lk~Viv~~Pg~e~~~l~p~~~~~~lf~~~~~~~~a~~eh~~f~~~L~~~Gv~V~~l~~~l~e~~~~~~~ 80 (412)
T d1rxxa_ 1 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEA 80 (412)
T ss_dssp CCSEECCSSSCEEEEEECCCCHHHHTCCTTTTGGGTCSCCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHHHTTSHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHH
T ss_conf 97753777100007896698388773690015664367788999999999999999997798899705768877349588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plpn~~F~R 160 (412)
T d1rxxa_ 81 LKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTR 160 (412)
T ss_dssp HHHHHHHHSCHHHHCTTTHHHHHHHHHTSCHHHHHHHHHHCEEGGGSCSCHHHHHHHHHHHHSCCCCEEECCCGGGGCTT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECC
T ss_conf 99999875032334655899999998708989999998626421003444332112211000356533578862121315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 D~~~~i~~gvii~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~EGGDvl~~g~~~l~~g~s~RTn 240 (412)
T d1rxxa_ 161 DTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSS 240 (412)
T ss_dssp TTEEECSSEEEECCCSSGGGHHHHHHHHHHHHHCHHHHTSCCEEEECCTTSCCTTCCCCGGGEEEEETTEEEEEESSSSC
T ss_pred CCCCEECCCEEECCCCCHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
T ss_conf 77534669789668997365436799999998580220576310147655547766042560899679689999431050
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~gi~~L~~~l~~~~~~~~v~~~~~p~~~~~~HLDt~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1rxxa_ 241 RQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTF 320 (412)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEECCC--CCCCHHHHEEEEETTEEEECHHHHTTCEEEEEEECTTSTTSEEEEECSSCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCCH
T ss_conf 99999999986642806775502678765420025427751798599831242754430442156655551010254317
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~l~~~l~~~~~~~i~~~~d~~~~~~e~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gi~vi~v~~~el~~~gGg~h 400 (412)
T d1rxxa_ 321 LEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGH 400 (412)
T ss_dssp HHHHHHHTTCSCCEEEECCCSCC--CCSSCCCCCCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCTTTTSSSCCTT
T ss_pred HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCE
T ss_conf 89999971898707955798525555666406520899679989984889999999997899899966567413798867
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
=
T Consensus 401 C~T~pl~Re~i~ 412 (412)
T d1rxxa_ 401 CMTCPIVRDPID 412 (412)
T ss_dssp TTCEEEEECCCC
T ss_pred ECCCCCCCCCCC
T ss_conf 887034627999
|
| >d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Tyrosine aminotransferase (TAT) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=0 Score=31113.94 Aligned_cols=1 Identities=0% Similarity=-1.255 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LRea 80 (412)
T d1bw0a_ 1 WDVSMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREA 80 (412)
T ss_dssp CCCCCCHHHHTCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 98781234568852899999856777799984788697899999852129999999998628777788998688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 160 (412)
T d1bw0a_ 81 VATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 160 (412)
T ss_dssp HHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999975475435687888886999446222025666543114432046411330144455405864222332223333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1bw0a_ 161 EADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTV 240 (412)
T ss_dssp EECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 12467887653111222222334333332201443023211222377666520217875447888764100001223433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 320 (412)
T d1bw0a_ 241 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 320 (412)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 11311555755756877743201240433003555554034553347750343202222333222333322110278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~l~~~~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal 400 (412)
T d1bw0a_ 321 YLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAV 400 (412)
T ss_dssp HHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHCCCEECCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 99999987349254378971499995782343788899999999998699999966214899939999738999999999
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
-
T Consensus 401 ~Rl~~~l~~~~~ 412 (412)
T d1bw0a_ 401 ERIKAFCQRHAA 412 (412)
T ss_dssp HHHHHHHHHHBC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999986179
|
| >d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]
Probab=100.00 E-value=0 Score=31113.23 Aligned_cols=1 Identities=0% Similarity=-0.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~s~~~~~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lr 80 (412)
T d1ajsa_ 1 APPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80 (412)
T ss_dssp CCCCTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHH
T ss_pred CCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 99584440876899769999999836899996884178875888999886899999999973787688889977789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 eaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~ 160 (412)
T d1ajsa_ 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRY 160 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 99999985157843245662230365305678899999988764047998989994786331689999859927874223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 240 (412)
T d1ajsa_ 161 WDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp EETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCHHHH
T ss_conf 36233554378999999725677389995589998687899999999999986389789830765654059865651566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1ajsa_ 241 RYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT 320 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 65444124321234663223577777345445616788999999999998631535641689999999853888899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~ 400 (412)
T d1ajsa_ 321 GNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHH
T ss_conf 99999999999999999999998489887036658975798459899999999985999981898688336988889999
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
=
T Consensus 401 a~aI~~av~~~~ 412 (412)
T d1ajsa_ 401 ATSIHEAVTKIQ 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999639
|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Hypothetical protein TT1467, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=31113.36 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~lalvlH~HqP~vr~~~~~~~~e~w~~~a~~e~YlPll~~~~~l~~~~~~~k~t~~lsP~LleqL~D~~l~~~f~~~l 80 (412)
T d1ufaa2 1 MARFALVLHAHLPYVRAHGMWPFGEETLYEAMAETYLPLIRVLERLRAEGVEAPFTLGITPILAEQLADARIKEGFWAYA 80 (412)
T ss_dssp CEEEEEEEEECCCCCTTSCSTTTSHHHHHHHHHHTHHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCHHHHHHHHHHH
T ss_conf 96379998257876568987874245999999998888999999998428983399997789999850878888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~r~L~~~G~vEl~~~~y~H~ilpll~~~~~~~~ 160 (412)
T d1ufaa2 81 KDRLERAQGDYQRYRGTALEASARHQVAFWELTLDHFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWA 160 (412)
T ss_dssp HHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHH
T ss_conf 99998750556532340667888888999999999999965458999999997598688835412333321796799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Qi~~~~~~~~~~fG~~P~G~W~~E~a~s~~~l~~~~~~g~~~~~~~gl~~iL~~~Gi~y~~~d~~~l~~~~~~~~~~~~~ 240 (412)
T d1ufaa2 161 QIKTGVSTYRRHFAKDPTGFWLPEMAYRPKGPWKPPVEGPPEGVRPGVDELLMRAGIRYTFVDAHLVQGGEPLSPYGEAA 240 (412)
T ss_dssp HHHHHHHHHHHHHSSCCCBEECGGGCBCCSEEECCSSSSSCCEEECCHHHHHHHTTCCEEEECHHHHHCSCCCCC-----
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
T ss_conf 99999999999759998867674222044113433321442102452889999739978997749985078766555556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~y~~~~~~~~v~~ffRD~~lSd~I~~~~~Gf~~~~~~~e~a~~d~~~~l~~~r~t~~~~~~~~~~~~Dgen 320 (412)
T d1ufaa2 241 LGPVESQEATYHVHELESGLRVLARNPETTLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAEKAPYDPEA 320 (412)
T ss_dssp ---CCCCGGGGSCEECTTSCEEEEBCHHHHHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCEECCCSSCCGGGCEECCHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 67533345650330489738999668777546332326988765356665221334489987113467855361068899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 awe~~~~~a~~Fl~~l~~~~~~~~~~ivv~~~D~ElFGhww~eg~~fL~~l~~~l~~~~~i~~tT~se~l~~p~~~v~lp 400 (412)
T d1ufaa2 321 AFAKTEEHARHFVGLLERLAGRHPEGVILSPYDAELFGHWWYEGVAWLEAVLRLLAQNPKVRPVTAREAVQGPAVRTALP 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHTCSSEEECCHHHHTCSCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCEEECC
T ss_conf 99998977999999999875058887589445588604024310999999999863189839976999982889714258
Q ss_pred -----------C
Q ss_conf -----------9
Q 003615 112 -----------C 112 (807)
Q Consensus 112 -----------C 112 (807)
-
T Consensus 401 ~sSWg~gg~~~v 412 (412)
T d1ufaa2 401 EGSWGRGGDHRV 412 (412)
T ss_dssp SBCSSGGGSSTT
T ss_pred CCCCCCCCCCCC
T ss_conf 988767898889
|
| >d1t3ca_ d.92.1.7 (A:) Botulinum neurotoxin {Clostridium botulinum, serotype E [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype E [TaxId: 1491]
Probab=100.00 E-value=0 Score=31048.49 Aligned_cols=1 Identities=100% Similarity=3.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~InnFNyndPVnn~~I~~~r~~~~~~~~KAFkI~~nIWViPER~~~~t~p~d~~pp~~~~~~d~~yYDpnyLsTD~EKD 80 (411)
T d1t3ca_ 1 PKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKD 80 (411)
T ss_dssp CCCCCCCTTSCCCSSSEEEEECTTCSSCEEEEEEETTEEEEEEECCTTCCGGGGSCSCSTTTTSSCCBCTTTTCSHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
T ss_conf 97666667898899728999448899712435620776875111247778212489732346887513753145621788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~FLk~iIKLf~RINs~~~G~~LL~~Is~aiPf~G~~~t~~~ef~~~~~~~~n~~~s~~~~~~~~~NlvIfGPg~nI~en~ 160 (411)
T d1t3ca_ 81 RFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETN 160 (411)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHTCCCCSCCTTSCTTSCCCCTTTCEEEECTTSCEEEECCSEEEEECCSBTTCCE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCCC
T ss_conf 99999999999863745799999999736875789999853311355430356336885201310269987885425665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~n~~~s~nGfGt~~~i~F~P~~t~~f~~~~~~~F~~DPAl~L~heLIhsLh~LYGIk~i~~~~~i~~~~~~~~ 240 (411)
T d1t3ca_ 161 SSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHQLIHSLHGLYGAKGITTKYTITQKQNPLI 240 (411)
T ss_dssp EEECCCGGGCCGGGTTSCCCEEEECCTTEEEEEECTTSCEEECCHHHHHHHHHHHHHHHHTTCCTTTTTCEECTTTTTCC
T ss_pred CEEEEECCCCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 03787405776322476504799976634786136777714248899999999999987618667887642101000556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~v~~eelltfGG~D~~~I~t~~~~~~~~~~l~~f~~ia~~l~~i~~~n~~~n~yK~~~~~Ky~~~~d~~g~~~vN~ 320 (411)
T d1t3ca_ 241 TNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNI 320 (411)
T ss_dssp SCTTCEEHHHHHHHCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTSCCSCGGGHHHHHHHHHHTTEEECTTSCEEECH
T ss_pred HCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEH
T ss_conf 41477554000300687800048711677999999999999999888627884178999999998577657887288548
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~kF~~~y~~l~~fTE~~~~~~f~v~~r~~Y~~~y~~~~~~nlldd~iYti~eGFNi~nl~~n~~GQN~~~N~~~~~~i~~ 400 (411)
T d1t3ca_ 321 NKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITG 400 (411)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHTCCCCSCSCSCCCEEEESCTTCTTTCBTTTBTCCGGGGGGGGGGBTTTSGGGEECCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99999999986223344668886887776886357632255467653221467433432001367653238465346785
Q ss_pred ----------C
Q ss_conf ----------9
Q 003615 112 ----------C 112 (807)
Q Consensus 112 ----------C 112 (807)
|
T Consensus 401 ~glv~~~~~~C 411 (411)
T d1t3ca_ 401 RGLVKKIIRFC 411 (411)
T ss_dssp TTHHHHHSSCC
T ss_pred CHHHHHHHHCC
T ss_conf 20588776339
|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: Putative NAG isomerase YihS species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31041.48 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~r~wL~~~~~~l~~~~~~~~~~gGF~~l~~dG~~~~~~~k~~~~~aR~~~~fs~a~~~g~~~~~~~A~~g~~f 80 (411)
T d2afaa1 1 KWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKA 80 (411)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHGGGEETTEECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 97687777899999999999864617789972346899897888772147768999999999975897799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 L~~~~~d~~~Gg~~~~~~~~~~~d~~k~~Y~~AF~l~ala~~~~~g~~~~~~~a~~~~~~l~~~~~~~~~G~~~~~~~~~ 160 (411)
T d2afaa1 81 MNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA 160 (411)
T ss_dssp TTTTTBCTTTSSBCSEECSSSEEECCEEHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 99856767998489862699986532104889999999999988588889999999999999996075689743220555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~n~~mhl~eA~~~l~~at~d~~~~~~a~~~~~~~~~~~~~~~~~~l~E~f~~dw~~~~~~~~~~~~~~~~~ 240 (411)
T d2afaa1 161 FSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRA 240 (411)
T ss_dssp SCCBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTCCBCTTTTTTCTTCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 67754424467448999999999884288999999999999888765156678411112666541443301264324564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~pGH~iE~aWlll~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~d~~gg~~~~~~~~g~~~~~~k~~W~qaEa 320 (411)
T d2afaa1 241 YGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEA 320 (411)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSSCCEEHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 33474138899999999999973134567299999999999999985726578980584015899967777455599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 i~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D~~~G~W~~~l~~~g~p~~~~~~g~~~~yH~~~a~~~~~~~~~~~~~~ 400 (411)
T d2afaa1 321 MGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAP 400 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCSEECTTSCBCC----CCCCCTTTHHHHTGGGSCSSSCHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99999999866989999999999999998687999983464589997998888999987206999998615889974218
Q ss_pred ----------C
Q ss_conf ----------9
Q 003615 112 ----------C 112 (807)
Q Consensus 112 ----------C 112 (807)
-
T Consensus 401 ~~~~~~~~~~~ 411 (411)
T d2afaa1 401 AVAAGLLDINA 411 (411)
T ss_dssp HHHTTCTTTTC
T ss_pred HHHCCCCCCCC
T ss_conf 88701346689
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Bni1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31037.92 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~PkP~~klK~l~W~ki~~~~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~~~~~~~~~~~~~lLd~kr~qni 80 (411)
T d1ux5a_ 1 KYPRPHKKLKQLHWEKLDCTDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCCCSSCBCCCCCCCCSSCCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 96989999989776159998988200204410036788663099999986447777776666666662001767899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d~~~L~~ 160 (411)
T d1ux5a_ 81 GINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQR 160 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCH
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCH
T ss_conf 89998706999999999998368542487899999830210134799999817993789999999851445478454387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~~~A~GF 240 (411)
T d1ux5a_ 161 ADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGF 240 (411)
T ss_dssp HHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999862334499999999999999999999999999999999999957679999999999860625899871235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 kL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~ 320 (411)
T d1ux5a_ 241 KLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLS 320 (411)
T ss_dssp CGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTT
T ss_pred EHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 23898876521179998018999999999869075332877888998861899999999999999999999999862025
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~~~~~~~~fF~~~~~F~~~~~~a~~en~~ 400 (411)
T d1ux5a_ 321 DSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLA 400 (411)
T ss_dssp CTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40002511169999999999999999999999999999999999983899888789999999999999999999999999
Q ss_pred ----------C
Q ss_conf ----------9
Q 003615 112 ----------C 112 (807)
Q Consensus 112 ----------C 112 (807)
=
T Consensus 401 ~~e~e~~~~k~ 411 (411)
T d1ux5a_ 401 AEEEERLYIKH 411 (411)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
T ss_conf 99999987209
|
| >d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome p450 152a1 (Bs-beta) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=31032.09 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 p~~~~~~~~l~~~~~~~~f~~~~~~kyg~~if~~~~~g~~~vvv~~pe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (411)
T d1izoa_ 1 PHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQ 80 (411)
T ss_dssp CBCCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCC
T ss_conf 98997014999997799999999999799769999889528999799999999769997113777287777644899645
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~dg~~h~~~R~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~l~~~v~~~~~g~~~~~~~~~~~~~~ 160 (411)
T d1izoa_ 81 GMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADD 160 (411)
T ss_dssp GCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 77808999999999873199999999999999999999985425751299999999998888874887647999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~k~~~a~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ag~~ 240 (411)
T d1izoa_ 161 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV 240 (411)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999876321310399999999999999999998621224586322899999986751775311013456665320332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 tts~~l~~~l~~L~~~P~vq~kl~~e~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ipkgt~V~~~~~~~~~dp 320 (411)
T d1izoa_ 241 AISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP 320 (411)
T ss_dssp THHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 30288999999987310123221001330499999999986503322344333334431043464221101355530442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~p~~F~PeR~~~~~~~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~ 400 (411)
T d1izoa_ 321 RLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE 400 (411)
T ss_dssp TTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC
T ss_conf 00899562186535899999776479899899988088439999999999999999826898179986887255377568
Q ss_pred ----------C
Q ss_conf ----------9
Q 003615 112 ----------C 112 (807)
Q Consensus 112 ----------C 112 (807)
=
T Consensus 401 ~~~~~~~~~Rr 411 (411)
T d1izoa_ 401 SGFVMSGIRRK 411 (411)
T ss_dssp TCCEEEEEEEC
T ss_pred CCCEEEEEECC
T ss_conf 99079988693
|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=30968.85 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~wwp~~~~~~~l~~~~~~~~p~~~~f~y~~~~~~ld~~a~~~d~~~l~~~s~~wwpaD~G~ygP~lVRl 80 (410)
T d2ccaa1 1 MKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRM 80 (410)
T ss_dssp CCCGGGTCCGGGTSTTCCCGGGGSCSCGGGCTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 98987899766628644587555148877899999862899986269999999999998544335765456633001100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 AWHsAGTYR~~DgRGGanGg~iRfaPe~sWp~N~~LdkAr~LL~piK~ky~~~iS~ADLi~LAG~vAiE~mGg~~i~f~~ 160 (410)
T d2ccaa1 81 AWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGF 160 (410)
T ss_dssp HHHHHTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHTTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCB
T ss_pred HHHHHCEEECCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECCEECCCCCCCCC
T ss_conf 22331301212677899877466541115312231899999988888760546567660336350210141255112455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 GR~D~~~~~~~~~g~~~~~~~~~R~~~~~el~d~l~~~~m~li~~np~g~~g~pd~~~~a~~lRd~f~rMglnD~E~VAL 240 (410)
T d2ccaa1 161 GRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAAL 240 (410)
T ss_dssp CCCCCSSCCCCCCCSCSSTTCCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 54435544200378866377899857632456754444458767787534689871017999999998706871766533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 iaGgHtlGk~Hg~~~~~~~g~~p~~a~~~~~G~g~~~~~~~~~~~~~~~sG~eg~WT~~P~~~dN~yF~~Ll~~~we~~k 320 (410)
T d2ccaa1 241 IVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTK 320 (410)
T ss_dssp HHHHHTSCCCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEE
T ss_pred HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECC
T ss_conf 12421113346788734257784658702157755688787778555367865547668514535777541356515214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 sp~g~~qw~~~d~~~~~~~pda~~~~~~~~~ml~tDlaL~~Dp~~r~iae~ya~d~d~F~~dFa~AW~KL~hrDmgp~~r 400 (410)
T d2ccaa1 321 SPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVAR 400 (410)
T ss_dssp CTTSCEEEEEGGGTTTTCBCCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGG
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 45655310355777777777776776678764226677520987899999997099999999999999986125796342
Q ss_pred ---------C
Q ss_conf ---------9
Q 003615 112 ---------C 112 (807)
Q Consensus 112 ---------C 112 (807)
.
T Consensus 401 ~~g~~~p~e~ 410 (410)
T d2ccaa1 401 YLGPLVPKQT 410 (410)
T ss_dssp CBSTTCCSCC
T ss_pred CCCCCCCCCC
T ss_conf 0689999889
|
| >d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30965.76 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~v~s~~~~y~~~~i~~~y~y~~t~v~~~~~g~~~v~p~~~~~~f~t~~~~p~klGVmlVG~GGnngTT~~aGv~An 80 (410)
T d1p1ja1 1 ITSVKVVTDKCTYKDNELLTKYSYENAVVTKTASGRFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLAN 80 (410)
T ss_dssp CCEEEECCTTEEEETTEEEEEEEEEEEEEEECTTSEEEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCCEEEECCCEEECCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 96569828980773411799988510389976897089987567789994256786478998417852899999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 k~gl~w~tk~G~~~pny~GSltq~stirlG~~~~g~~~~~p~kd~lPl~~p~DiVfGGWDI~~~nl~eAa~rA~VLd~~l 160 (410)
T d1p1ja1 81 KHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDL 160 (410)
T ss_dssp HTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEECSSCCCHHHHHHHHTCSCHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHH
T ss_conf 62786333556546763230210031431455788845663776188898412789245699988999998769999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~ql~~~L~~i~P~psV~~~dfiaanq~~ra~nvi~~d~~~~~~~~sk~e~ve~Ir~DIr~Fk~~n~lDrVVVlWtASTE 240 (410)
T d1p1ja1 161 QQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTANTE 240 (410)
T ss_dssp HHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHHHHHHHTTCSCEEEEECSCCC
T ss_pred HHHHHHHHHCCCCCCCEECCHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999998638634320060555212112102322456545546655899999999999999987389748999458887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~~~~~p~v~~t~e~l~~ai~~n~~eIsPS~lYA~AAI~eG~pyvNgsPq~t~vPal~eLA~~~gv~iaG~DfKdslLA~ 320 (410)
T d1p1ja1 241 RYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKDSLLAT 320 (410)
T ss_dssp CCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 68888832124399999887559987787999999999739984468864456579999984279458715124322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 pli~dL~vl~e~~trI~~~~dg~vl~d~~~f~~~~~Vls~Lsyl~KAPl~p~g~~vvnal~~Qr~~len~~ra~~Gl~p~ 400 (410)
T d1p1ja1 321 PLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQ 400 (410)
T ss_dssp HHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999887650368621765457622162153089898887538989999965016888999999999997289986
Q ss_pred ---------C
Q ss_conf ---------9
Q 003615 112 ---------C 112 (807)
Q Consensus 112 ---------C 112 (807)
-
T Consensus 401 ~~m~le~~l~ 410 (410)
T d1p1ja1 401 NELRFEERLL 410 (410)
T ss_dssp CCCCHHHHCC
T ss_pred CCCEEEEECC
T ss_conf 6651146329
|
| >d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30962.61 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~g~~~~~~~iE~~~~~~la~Me~~Gi~vD~e~l~~~~~~~~~~~~~l~~~~~~~~g~~fn~~S~~ql~~~Lf~~lgl~~ 80 (410)
T d1kfsa2 1 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 80 (410)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCBCBCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCSCTTTTSHHHHTTTSSCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99689999999988999999999739898899999999999999999999999995990899999999999997429998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~t~~g~~~t~~~~L~~~~~~~~~~~~l~~~r~~~k~~~~~~~~~~~~~~~~~gri~~~~~~~gt~TGR~s~s~pnlQn 160 (410)
T d1kfsa2 81 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQN 160 (410)
T ss_dssp CCCCC----TTTCCHHHHHTTTCHHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSSBCCEEESSCCSSSCCEEESSCGGG
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
T ss_conf 76478898554055410112223899999999999999887652433125778995412575124200232136863035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~P~~~~~~~~iR~~fia~~G~~lv~~D~sqiE~Rv~A~ls~D~~l~~~~~~g~D~h~~~A~~~~~~~~~~~~~~~R~~aK 240 (410)
T d1kfsa2 161 IPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 240 (410)
T ss_dssp SCSSSHHHHHHHTTBBCCTTEEEEEEEETTHHHHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHTTCCTTTCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHEEECCCCCEEEEECHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHH
T ss_conf 78887423255632736999779985545384443444676224788885265067641999819973210220043320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~g~~YG~G~~~la~~l~~s~~eA~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~v~t~~Grr~~~~~~~~~~~~~r~~ 320 (410)
T d1kfsa2 241 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 320 (410)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCTTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECTTTTCSSHHHHHH
T ss_pred HEEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 31230141356778998809899999999999988787846899999999997595530368503699754405878888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~r~a~N~~iQg~aadi~k~a~~~i~~~l~~~~~~~~~v~~VHDEiv~ev~~~~~~~~~~~i~~~M~~~~~~~vPl~~e~ 400 (410)
T d1kfsa2 321 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 400 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEETTEEEEEEETTTHHHHHHHHHHHHHHSSCSSSCCCEEE
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 88888652013389999999999999999852899889998453258998389999999999999846456898468320
Q ss_pred ---------C
Q ss_conf ---------9
Q 003615 112 ---------C 112 (807)
Q Consensus 112 ---------C 112 (807)
=
T Consensus 401 ~~g~~w~e~h 410 (410)
T d1kfsa2 401 GSGENWDQAH 410 (410)
T ss_dssp EEESBHHHHC
T ss_pred CCCCCHHHHC
T ss_conf 5628868829
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=0 Score=30960.69 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~ 80 (410)
T d1uuqa_ 1 EHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG 80 (410)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99879989999999989999999317765566567879999999999999977995999687366545555568776554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1uuqa_ 81 FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQE 160 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 33245889999999999999739856874034556657754465312477767655555553335665300368999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~ 240 (410)
T d1uuqa_ 161 YRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGS 240 (410)
T ss_dssp HHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 99999999986546666765577067666533665776676543320346677777775455408995576424566666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~ 320 (410)
T d1uuqa_ 241 VNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYA 320 (410)
T ss_dssp TTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCGGGCCC
T ss_pred CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 44321013440477655688612754446555433322222015666778888888876249976650255656788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~d~~~~~~ 400 (410)
T d1uuqa_ 321 MDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAI 400 (410)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSCEETTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 76468999999999999999999828998999995416878888887778779987798985347348998899748899
Q ss_pred ---------C
Q ss_conf ---------9
Q 003615 112 ---------C 112 (807)
Q Consensus 112 ---------C 112 (807)
=
T Consensus 401 ~~~~~~~~~~ 410 (410)
T d1uuqa_ 401 MKEFNARFQP 410 (410)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHCCC
T ss_conf 9999974197
|
| >d1s5ja1 c.55.3.5 (A:40-449) Exonuclease domain of family B DNA polymerases {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=30960.44 Aligned_cols=1 Identities=100% Similarity=1.035 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~ll~~~Y~~~~~~~vi~~~g~~~~~~~v~~~~~gf~PYFyv~~~~~~~~~~~~~~~~~~~~~~e~v~k 80 (410)
T d1s5ja1 1 EWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDKETQKIYALYDNTGHKPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSK 80 (410)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTTTEEEEEEEETTTTEEEEEECCSCCCCEEEESSCHHHHTTCHHHHTCTTEEEEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 97655456875899986886329989999974269938999968896530899888216899998764236561799997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~ki~~~~p~~v~~~r~~~~~~~EadI~~~~RfliD~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1s5ja1 81 IDPYTWNKFKLTKIVVRDPLAVRRLRNDVPKAYEAHIKYFNNYMYDIGLIPGMPYVVKNGKLESVYLSLDEKDVEEIKKA 160 (410)
T ss_dssp ECTTTCCEEEEEEEEESSHHHHHHHTTSSSCEESCSSCHHHHHHHHHTCCTTSEEEEETTEEEECCCCCCHHHHHHHHHH
T ss_pred EECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 71237853069999982899999999874654013668421179994886635899558743334555672011010133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~lsfDIE~~~~~~~~fP~p~~~~~~ii~I~~~~~~~~~~v~~~~~~~~~~~~~ 240 (410)
T d1s5ja1 161 FADSDEMTRQMAVDWLPIFETEIPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSV 240 (410)
T ss_dssp TTTSCHHHHHHHHHHTHHHHSCCCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEEEEECSSCCCCCCE
T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 34443000000011354333689984199999997878889897953367549999998165878999981677766544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~v~~~~sE~eLL~~F~~~i~dpDii~GyN~~~FD~pyL~~Ra~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (410)
T d1s5ja1 241 KLDGISVERFNTEYELLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKF 320 (410)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHTTCSEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEECCE
T ss_conf 67980999978999999998754316666898435688689999999995996321531104741016855458976062
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~d~~~~~~~~~~l~sy~Ld~Va~~~Lg~~K~d~~~~~~~~~~~~l~~Y~~~D~~L~~~L~~~~~~~~l~~~~~~s~i~ 400 (410)
T d1s5ja1 321 FFNKAVRNYAFEGKYNEYNLDAVAKALLGTSKVKVDTLISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRIS 400 (410)
T ss_dssp HTSHHHHHHTSTTCCSSCSHHHHHHHHHCCCCC--SSCTTTCCHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62148998752358788987999999869695567776565897999886099999999998652588899999999985
Q ss_pred ---------C
Q ss_conf ---------9
Q 003615 112 ---------C 112 (807)
Q Consensus 112 ---------C 112 (807)
-
T Consensus 401 ~~plddv~r~ 410 (410)
T d1s5ja1 401 RLGIEELTRT 410 (410)
T ss_dssp CCCHHHHTTS
T ss_pred CCCHHHCCCC
T ss_conf 9798980479
|
| >d2cmza1 e.76.1.2 (A:1-409) Spike glycoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Viral glycoprotein ectodomain-like superfamily: Viral glycoprotein ectodomain-like family: Spike glycoprotein-like domain: Spike glycoprotein species: Vesicular stomatitis indiana virus [TaxId: 11277]
Probab=100.00 E-value=0 Score=30890.65 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~iv~p~~~~~~W~~v~~~~l~CP~~~~~~~~~~~~~~~~~~~~p~~~t~~kv~G~~Chk~~w~ttC~~~wyg~~~it~ 80 (409)
T d2cmza1 1 KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTAIQVKMPKSHKAIQADGWMCHASKWVTTCDFRWYGPKYITQ 80 (409)
T ss_dssp CEEEEEECSCCCCCEECCTTCCCCGGGGCTTTCCSCEEEEEEEEEECCCSCCEECEEEEEEEEEEEEEEECTTSCEEEEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCEEEEEEEEEEEEEEEEECCEEEEE
T ss_conf 97689168888888237711244999745467786245558998103566336552798655899998746307558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~i~~~~pt~~~C~~ai~~~~~G~~~~p~fPp~~C~w~tv~t~e~~~i~i~ph~V~lDpY~~~~~D~~F~gGkCs~~~C~T 160 (409)
T d2cmza1 81 SIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVTDAEAVIVQVTPHHVLVDEYTGEWVDSQFINGKCSNYICPT 160 (409)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTCCCCCCSCCCCCCTTSEEEEEEEEEEEEECCEEEETTTTEEECTTBGGGEECSSEEEB
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCC
T ss_conf 99974499899999998876587258989985515631211037999996455325377882746757999668970677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~h~~tiWi~d~~~~~~C~~~~~~~~i~~~~~~gk~~s~g~~~~g~~~~~~~~~~~~gACkl~fCG~~GIRl~~GeWv~i~ 240 (409)
T d2cmza1 161 VHNSTTWHSDYKVKGLCDSNLISMDITFFSEDGELSSLGKEGTGFRSNYFAYETGGKACKMQYCKHWGVRLPSGVWFEMA 240 (409)
T ss_dssp SSSSCEEEESSCHHHHHGGGEEEEEEEEEESSCCGGGTTCSSCEEEETTEEEEECTTCEEEEETTEEEEECTTSBEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCEEEEE
T ss_conf 67861661577666501355301211684255600014653038983785545778831254348754687798589986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~p~C~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~Cl~tl~ki~~~~~iS~~dLSyL~p~~PG~G~AY~i~n 320 (409)
T d2cmza1 241 DKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILDYSLCQETWSKIRAGLPISPVDLSYLAPKNPGTGPAFTIIN 320 (409)
T ss_dssp CHHHHHHTTCCBCCTTCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHTTSCCSSEEEEEEEEET
T ss_pred CCCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 66641002577799998655036775166778999877879998999999974798775555420567999864379989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 gtL~~~~~~Y~~v~~~~~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~G~NG~~~~~~~~~~p~~~~~~~~~d~~l~~~~ 400 (409)
T d2cmza1 321 GTLKYFETRYIRVDIAAPILSRMVGMISGTTTERELWDDWAPYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSS 400 (409)
T ss_dssp TEEEEEEEEEEEEEESSSEESSSEEEETTSCCEEECCCCCEEETTEEECGGGCEEETTEEECCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCEEEEECCEEEECHHHHCCCCHHHHHHHHH
T ss_conf 94897668999998226653332564477774542244646868844466526985994895656711520034444440
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
=
T Consensus 401 ~~~~~~HPh 409 (409)
T d2cmza1 401 KAQVFEHPH 409 (409)
T ss_dssp CCEECCCCC
T ss_pred CCCCCCCCC
T ss_conf 267678999
|
| >d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Plasmodium falciparum [TaxId: 5833]
Probab=100.00 E-value=0 Score=30888.86 Aligned_cols=1 Identities=0% Similarity=-1.723 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~y~~~~~~~l~~l~pe~ah~~~~~~l~~~~~~~~~~~~~~~L~~~v~Gl~f~NPiglAAG~dk~~~~i~~~ 80 (409)
T d1tv5a1 1 FESYNPEFFLYDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGFDKNGVCIDSI 80 (409)
T ss_dssp CCTTSTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTTTTTCSSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHH
T ss_conf 98778326789999999852599899999999999735777534677744466788764489687560668788999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~lGfG~ve~gTvT~~p~~GNp~PR~~r~~~~~~liN~~Gl~n~G~~~~~~~l~~~~~~~~~~~~~~~~i~gi~~~~~~~ 160 (409)
T d1tv5a1 81 LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKD 160 (409)
T ss_dssp HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTT
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 86688769951023035647897322345433321024677763589999987777654430566654300231454420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~aD~~elNiScPNt~glr~~~~~~~L~~ll~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
T d1tv5a1 161 TVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKN 240 (409)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 15788877999998850143100010265433442456889999999999999875301222221111111001111000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppi~vKlsPd~~~~~i~~i~~~~~~~g~dgii~~Nt~~~~~~~~~~~~~~GGlS 320 (409)
T d1tv5a1 241 NFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 320 (409)
T ss_dssp ----------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11222222110000000110123567865998589987024688999988606541011322225555334234677643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 G~~l~~~al~~v~~v~~~~~~~ipIIGvGGI~s~~Da~e~i~AGAs~VQv~T~li~~Gp~~v~~I~~~L~~~l~~~g~~~ 400 (409)
T d1tv5a1 321 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYN 400 (409)
T ss_dssp EHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 10178899999999999708996099989979999999999849978763067871192899999999999999829998
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
-
T Consensus 401 i~e~iG~~h 409 (409)
T d1tv5a1 401 LKEAIGRKH 409 (409)
T ss_dssp SGGGTTTTC
T ss_pred HHHHCCCCC
T ss_conf 999539889
|
| >d1qtma2 e.8.1.1 (A:423-831) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Thermus aquaticus [TaxId: 271]
Probab=100.00 E-value=0 Score=30886.32 Aligned_cols=1 Identities=100% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~l~~~y~~lE~~l~~vl~~me~~Gi~vD~~~l~~~~~~~~~~~~~l~~~~~~~~g~~fN~~S~~ql~~~L~~~l~l~~ 80 (409)
T d1qtma2 1 EERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPA 80 (409)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 90789999999968999999999729284899999999999999999999999995991899999999999999739997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~g~~~~~~~~l~~l~~~~~~~~~~~~~~~~~kl~~~~~~~~~~~~~~~~grih~~~~~~gt~TGR~ss~~pnlq 160 (409)
T d1qtma2 81 IGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQ 160 (409)
T ss_dssp CCBCTTTCCBCCCHHHHHHTTTTCTHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSEECCEEESSCCSSSCCEEESSCCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 66656678755323368887421168999999889988888878778775038899163144556666665466650120
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~p~~~~~~~~~R~~f~a~~G~~lv~aD~sqiElRvlA~ls~D~~l~~~~~~g~D~~~~~a~~~~~~~~~~v~~~~R~~a 240 (409)
T d1qtma2 161 NIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAA 240 (409)
T ss_dssp SCCCSSHHHHHHHTTEECCTTEEEEEEEETTHHHHHHHHHHCCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHCCCCCEEECHHHHHHH
T ss_conf 25410014454100555789968998530236324688860674411110157620101012212764223140676667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 K~~~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~v~t~~Gr~~~~~~~~~~~~~~~~ 320 (409)
T d1qtma2 241 KTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRE 320 (409)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSCHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 76410123576334566665442778999999998864235677788999887627233235653332100001254432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~N~~iQg~aAdi~k~a~~~~~~~l~~~~~~iv~~VHDEiv~ev~~~~a~~~~~~i~~~M~~~~~l~vPl~~e~~ 400 (409)
T d1qtma2 321 AAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVG 400 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEEEEEEETTTHHHHHHHHHHHHHTSSCCSSCCCEEEE
T ss_pred HHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 20200121320399999999999999999886699899974413499987789999999999998603268997786621
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
=
T Consensus 401 ig~~W~e~k 409 (409)
T d1qtma2 401 IGEDWLSAK 409 (409)
T ss_dssp EESBHHHHC
T ss_pred ECCCHHHCC
T ss_conf 558967749
|
| >d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: LanC-like family: LanC-like domain: Nisin biosynthesis protein NisC species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30885.82 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~sLy~G~~GiaL~l~~l~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~g 80 (409)
T d2g0da1 1 KKNIKRNVEKIIAQWDERTRKNKENFDFGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGS 80 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC-----CGGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 95188999999985566530365569989983238779999999999886498789999999999999998607998863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lf~G~~Gi~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~D~l~G~aG~~~~LL~~~~~~~~~~~~ 160 (409)
T d2g0da1 81 LYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLINDEQYDDLKI 160 (409)
T ss_dssp TTTSHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCCCGGGHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf 00787999999999986050356899999999999999999874402367766212226188999999833222407899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~sGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (409)
T d2g0da1 161 LIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYE 240 (409)
T ss_dssp HHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999997413554333454445552200036778776426550799999999998843788218999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~la~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (409)
T d2g0da1 241 KFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDS 320 (409)
T ss_dssp HHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98642335688987676531123334456766655437884679999999998719889999999999999983548998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~LCHG~aG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGi~~~Ll~~~~~~~~~~W~~~~L 400 (409)
T d2g0da1 321 YMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVLSKFEYSINFTYWRQALL 400 (409)
T ss_dssp CCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHHHSCCSTTCSSTTTSHHHHHHHHHHHHSCCCSSCGGGGGT
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHC
T ss_conf 93568689999999999988488799999999999888743467899997244169999999998268999987112110
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
-
T Consensus 401 ~~~~~~~~~ 409 (409)
T d2g0da1 401 LFDDFLKGG 409 (409)
T ss_dssp CCTTTTTCC
T ss_pred CCCCCCCCC
T ss_conf 456234488
|
| >d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini [TaxId: 2094]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Mycoplasma arginini [TaxId: 2094]
Probab=100.00 E-value=0 Score=30885.06 Aligned_cols=1 Identities=0% Similarity=-0.262 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~v~SE~g~Lk~V~vhrPg~e~~~l~P~~~~~~lfd~~~~~~~a~~Ehd~f~~~L~~~Gv~V~~l~~ll~e 80 (409)
T d1s9ra_ 1 SVFDSKFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAE 80 (409)
T ss_dssp CCSCTTCCSCBBCCSSSCEEEEEECCCCGGGGGCCGGGHHHHTCSSCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
T ss_conf 93113778641577700131799769848987269311577514777799999999999999999789889983786876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~g~~~~e~~~~~~~~~~~~plpn~~F~RD 160 (409)
T d1s9ra_ 81 TYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRD 160 (409)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHTCSSHHHHHHHHHHCEEHHHHTCCCSSSEEECCCGGGGCTTS
T ss_pred HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHCCC
T ss_conf 55407999999999863101134454768888999986048889999988524515442555676334678755200057
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~gvil~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~EGGD~l~~g~~~~~iG~s~RTn~~gie~L 240 (409)
T d1s9ra_ 161 PFASVGNGVTIHYMRYKVRQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTDLQTVTLL 240 (409)
T ss_dssp SEEEEBTEEEECCCSSHHHHTTHHHHHHHHHHCTTTTTCCEEECGGGCSCCCGGGEEECSSSEEEEEESSSCCHHHHHHH
T ss_pred CEEEECCCEEECCCCCHHHCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHH
T ss_conf 43687486897899984665477999999984844349855972687664556747998996799997876798999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~L~~~~~~~~~~v~~~~~p~~~~~mHLDt~f~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (409)
T d1s9ra_ 241 AKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQS 320 (409)
T ss_dssp HHHHHHCTTCCCCEEEEEECCCBTTBCSGGGTEEECSSSEEEECGGGTTTCEEEEEETTTSCSSCCCEEECCCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99863447712689875047886552233560243279849982543564220012203676654101210338999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~i~~~~~~~~~~~~~~E~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gievi~i~~~el~~~gGg~hCmT~ 400 (409)
T d1s9ra_ 321 IINKKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEKTNAALEAAGIKVLPFHGNQLSLGMGNARCMSM 400 (409)
T ss_dssp HHSSCCEEEETTCTTCCHHHHHHHHHTTTTCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCHHHHTTSCCTTTTCE
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCEECCC
T ss_conf 74799808984688764566655540574049997799899858869999999978899999673785327998777870
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
.
T Consensus 401 pl~Re~v~~ 409 (409)
T d1s9ra_ 401 PLSRKDVKW 409 (409)
T ss_dssp EEEECCCCC
T ss_pred CCEECCCCC
T ss_conf 345279899
|
| >d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Formaldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=30884.29 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 D~e~~~~~~~~~~~~i~~~~~~~~~~~~GT~~~~~~~~~~g~lP~rNf~~g~~~~a~~isge~~~~~~~~~~~C~~Cpi~ 80 (409)
T d1b25a1 1 DKEELKKLSQEAYNEILNSPGYPFWKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEGMKVQQRGCPYCNMP 80 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTHHHHHHHGGGGHHHHHHHTTCSCBTTTTBSCCTTGGGGSHHHHHHHEEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999999999999987194176788368599999998759968177878878873445899998775127888999678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 C~~~~~~~~g~~~gpEYEt~~~~Gs~~gi~D~~~v~~~n~lcd~~GlDtIs~G~~ia~amE~~e~Gll~~~~~~Gd~e~~ 160 (409)
T d1b25a1 81 CGNVVLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILKEGPTFGDFKGA 160 (409)
T ss_dssp CEEEEECTTSCEEEECHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSSSSCCTTCHHHH
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88358728987078536479887660289999999999999998687456450599999999977999866667886999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~ll~~Ia~r~GeiG~~La~G~~~aae~~G~~~~a~~vKG~e~p~~dpR~~~g~~l~yats~rGa~H~~~~~~~~~~~~~ 240 (409)
T d1b25a1 161 KQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTA 240 (409)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCHHHHHHHHTCGGGCCEETTEECCSCCCTTCHHHHHHHHHCTTSSCSTTCCCHHHHHTCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
T ss_conf 99999998667857899973399999994982321020777666527763024666551246787045533220331357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dslg~C~F~~~~~~~~~e~~~~~l~avTG~~~t~eel~~~GeRi~ 320 (409)
T d1b25a1 241 PIEGEKAEKVEYKISYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVTYTWDDLYKAADRVY 320 (409)
T ss_dssp TTC--------CCCCCCTHHHHHHHHHHHHHTTHHHHHTCCSHHHHHHCCCTTHHHHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 41110123312345678078999999999999999860404552214577899999999984388999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~L~R~fN~r~G~~~~~~~dD~lP~r~~~ep~~~Gp~~G~~~d~~~~e~~l~~YY~~rGWde~G~Pt~e~L~~LgL~~v~~ 400 (409)
T d1b25a1 321 SLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSEYYRIRGWDERGIPKKETLKELDLDFVIP 400 (409)
T ss_dssp HHHHHHHHHHTTTCCCGGGGCCCTHHHHCCCSSSTTTTCCCCHHHHHHHHHHHHHHHTBCTTSCBCHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHH
T ss_conf 99999998606679983427797154118887787578868999999999999997399988846999999879966899
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
=
T Consensus 401 ~l~~~~~~~ 409 (409)
T d1b25a1 401 ELEKVTNLE 409 (409)
T ss_dssp HHHTTSCCC
T ss_pred HHHHHHCCC
T ss_conf 999986169
|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30881.44 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~~L~~V~il~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~G~LT~~G~~q~~~lG~~lr~~Y~~~~~~~~~~~~~~~ 80 (409)
T d1dkla_ 1 SEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSG 80 (409)
T ss_dssp CCSCEEEEEEEEEEECCCBCCCCCCHHHHHTCSSCCCCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCCTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99888898999997188899999866557688433557999930526999999999999999998774367887778712
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~i~vrSt~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1dkla_ 81 QVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQT 160 (409)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHHSTTCCCCEECCSCTTSCCGGGCTTTTTSSCCCHHHHHHHHHHHTTSSHHHHHHTTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 06987279729999999999852788676655445556667566777577667536777789987745647778899889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~p~~~~~~~~~ 240 (409)
T d1dkla_ 161 AFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSH 240 (409)
T ss_dssp HHHHHHHHHTGGGSHHHHTC-----CCCHHHHSCCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCSSGGGGTCCSHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHH
T ss_conf 99999999721121037877510037889999899988640477767726667659999999998599972110357799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~k~~l~s~HD~ti~~ll~aLgl~~~~~ 320 (409)
T d1dkla_ 241 QWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLP 320 (409)
T ss_dssp HHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHSCCCCEECGGGCEESCSEEEEEECHHHHHHHHHHHTCCCCBT
T ss_pred HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf 99999999998650005887899873668999999999876404555678888638999568414999999819853456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~p~as~~~~El~~~~~~~~~~vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~~~C~l~~F~~~~~ 400 (409)
T d1dkla_ 321 GQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVN 400 (409)
T ss_dssp TBSCSSCTTCEEEEEEEEETTTTEEEEEEEEEECCHHHHHTTCCCCSSSCCEEEECCCTTCCCBCTTSCEEHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66899997663899999846999725999995376201245665201025775046479998889999368999999999
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
-
T Consensus 401 ~~~~p~c~~ 409 (409)
T d1dkla_ 401 EARIPACSL 409 (409)
T ss_dssp HHSCGGGCC
T ss_pred HHHHHHCCC
T ss_conf 775021279
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=100.00 E-value=0 Score=30881.39 Aligned_cols=1 Identities=0% Similarity=-1.457 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~k~~v~Y~~~~~~f~d~~~~~~Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~ 80 (409)
T d1wzaa2 1 FEKHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGT 80 (409)
T ss_dssp CCCCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCC
T ss_pred CCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98761799996412137999987489999975533210022277616866799798887989888684567875834599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~dlk~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1wzaa2 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGY 160 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999866988998213344445673123331146553345322356444567654579853322346664466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~dln~~n~~vr~~~~~~~~~wi~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (409)
T d1wzaa2 161 FWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDISET 240 (409)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 77887620325689999999999999982987212253532166032020068999999740037880799986037521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~r~~~~~~~~~~~~~~ 320 (409)
T d1wzaa2 241 VAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHDQNRILDQLGQDRNKARV 320 (409)
T ss_dssp HGGGGTTTCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHTCTTSCCCBCBSCCTTSCCHHHHTTTCHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 13444202232012468999988774167521678877777766543002456556312455567310002786678999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~lt~pG~P~iy~G~E~G~~~~~~~~~~R~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~Li~l 400 (409)
T d1wzaa2 321 AASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFTSVEQEEKNLDSLLNHYRRLIHF 400 (409)
T ss_dssp HHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTCCHHHHTTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999838998799558653766899986546788777788888776775555655468998863748999999999999
Q ss_pred --------C
Q ss_conf --------9
Q 003615 112 --------C 112 (807)
Q Consensus 112 --------C 112 (807)
-
T Consensus 401 Rk~~pal~s 409 (409)
T d1wzaa2 401 RNENPVFYT 409 (409)
T ss_dssp HHHCTHHHH
T ss_pred HHHCCHHCC
T ss_conf 960813039
|
| >d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Family 10 polysaccharide lyase family: Family 10 polysaccharide lyase domain: Polygalacturonic acid lyase (pectate lyase) species: Azospirillum irakense [TaxId: 34011]
Probab=100.00 E-value=0 Score=30812.89 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~a~~~t~ar~~~~p~~~~aAw~~y~a~s~~~~~a~~~~~~a~~~~g~~~p~~p~~~~~~~~~~l~~~~~wy~s 80 (408)
T d1r76a_ 1 AVIGMNEAASALTPSRVSSLPDTQRAAWQEYLARSEAQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDKPAAWYTS 80 (408)
T ss_dssp CCCEECCCCCCCCHHHHSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSSCGGGGGS
T ss_pred CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 95554541011687776369878888986436665556766776666653248878999986643033671467444577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~eA~~iAd~lL~~Q~p~GGWpKn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TiDN~aTt~el~~La~ 160 (408)
T d1r76a_ 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 79999999999853447998776653200110102232210134455300144555542246788686248999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~y~~a~~~~~~~ll~~Q~~~Ggwpqf~p~~~~Y~~~ItfND~~m~~~l~~l~~~~~~~~~~~~~~~~~r 240 (408)
T d1r76a_ 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99973763214699999999999997317799964437887552343112755899799999999973465344787889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~r~~~a~~rgi~~ll~~Q~~~gg~~~~Wg~Qhd~~tl~P~~aR~yE~~sls~~eS~~i~~~LM~~~~ps~~~~~aI~~av 320 (408)
T d1r76a_ 241 TRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQAIRGGV 320 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999987610488867486525835567344336677264003189999999717777755999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~lwaRfyel~tn~P~f~~Rd~~~~~~~~ei~~err~gy~w~~~~~~~~~~~ 400 (408)
T d1r76a_ 321 AWLNTSVIRDRAWVKSDQGYQLVTEQGAKPLWSRFYSLDGNKPVFGDRDKTIHDDVMGISQERRTGYAWYTTSPQKALSA 400 (408)
T ss_dssp HHHHHSCCCC---------------CCSSCCEESEECSSSCCBCEECTTSEEESCGGGSCHHHHSSSCCEESTTHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCEECCHHHCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 99986646785355348884242089998533256775899624657998653477662097628702427776999998
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
-
T Consensus 401 y~~w~~~~ 408 (408)
T d1r76a_ 401 FTKWEKRS 408 (408)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 89987449
|
| >d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30813.21 Aligned_cols=1 Identities=100% Similarity=1.035 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 em~~ifs~~~~~~~~l~ve~A~a~a~~e~G~ip~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~a~~~~L~e~~g~~~~~v 80 (408)
T d1f1oa_ 1 EMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMRENASFDINRILEIEKDTRHDVVAFTRAVSESLGEERKWV 80 (408)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 94787790799999999999999999877999999999999847677999998874538858999999998738646341
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 H~G~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 160 (408)
T d1f1oa_ 81 HYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERF 160 (408)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 67887899998999999998488888899999999999999828860146675177777408899999999999879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~lGGA~Gt~~~~~~~~~~~~~~~lg~~~~~~~~~~~~rd~~~e~~~~l~~la~~l~kia~Dl~~~~s~~~ 240 (408)
T d1f1oa_ 161 KQAKAGIEVGKISGAVGTYANIDPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSET 240 (408)
T ss_pred HHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987650124460431346788558999999846767872278887788999987999999999987789998871344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~e~~~~~~~GSSiMP~K~NP~~~E~v~~~~~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~ 320 (408)
T d1f1oa_ 241 REVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPLWHERDISHSSAERIILPDATIALNYMLNRFS 320 (408)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 61440366789875200035564079999987601111378998726431200304567776214009999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~l~~l~vn~e~m~~nl~~~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~l~~~~~i~~~Ls~eel 400 (408)
T d1f1oa_ 321 NIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKI 400 (408)
T ss_pred HHHHCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHH
T ss_conf 87637865799999999730472689999999998299989999999999999999798899998706786668999999
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
.
T Consensus 401 ~~~lDp~~ 408 (408)
T d1f1oa_ 401 ADCFDYNY 408 (408)
T ss_pred HHHCCCCC
T ss_conf 98659998
|
| >d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30811.06 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~l~~~ 80 (408)
T d1c4oa1 1 TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPEN 80 (408)
T ss_dssp CCCCCSCCCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 96214899998779999999999866997379856888789999999999859999999189999999999999864766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVv~~~a~l~~l~~~~~~~~~~~~l~~G 160 (408)
T d1c4oa1 81 AVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVERG 160 (408)
T ss_dssp EEEECCCGGGTSCCCEEEGGGTEEECCCCSCCHHHHHHHHHHHHHHHHCSCEEEEEEGGGCSCCCCHHHHHHCCBC----
T ss_pred CEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHCEEEEECC
T ss_conf 45567753422575456845554444421034677764446555320467659995112321678818876114885179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~l~~~L~~~gY~r~~~V~~~GefsvRG~IlDIfp~~~~~P~RIeffgDeIdsIr~Fd~~tQrs~~~~~~~~i~P 240 (408)
T d1c4oa1 161 KPYPREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELFGDEVERISQVHPVTGERLRELPGFVLFP 240 (408)
T ss_dssp --------------------------------------------------------------------------CCCBCC
T ss_pred CEEEHHHHHHHHHHHHCEECCEEECCCEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC
T ss_conf 89508999999997522214305336605730671276002457637899946733268997278896567655456522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~Gie~yl~~f~~~~~~e~~~tL~ 320 (408)
T d1c4oa1 241 ATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLL 320 (408)
T ss_dssp SCSCCCCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTSCCCCGG
T ss_pred CCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
T ss_conf 41110135578888876566899999998737416777799999988877875188765777799865778899852466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 DYlp~~~lv~~De~~~~~~~~~~~~~e~~e~~~~lle~g~~lP~~~d~~~L~~ee~~~~~~q~i~~S~~p~~~e~~~~~~ 400 (408)
T d1c4oa1 321 DYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGR 400 (408)
T ss_dssp GGSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHTTSSCGGGGGSSCCCHHHHHHTCSEEEEEESSCCHHHHHHCSE
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCCC
T ss_conf 51687508999582877999999998899999868757867885434798899999985598899808998422306885
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
=
T Consensus 401 ive~~~Rp 408 (408)
T d1c4oa1 401 VVEQIIRP 408 (408)
T ss_dssp EEEECSCT
T ss_pred EEEEEECC
T ss_conf 47996088
|
| >d2hhva2 e.8.1.1 (A:469-876) DNA polymerase I (Klenow fragment) {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
Probab=100.00 E-value=0 Score=30809.12 Aligned_cols=1 Identities=100% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~e~ll~~lE~~l~~vLa~ME~~Gi~vD~e~l~~~~~~l~~~~~~le~~i~~~~G~~fN~~S~~ql~~~Lf~~L~l~~~~ 80 (408)
T d2hhva2 1 EQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLK 80 (408)
T ss_dssp TCHHHHHTTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 97689999988899999999984969789999999999999999999999999699679999999999999855999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~r~~~k~~~~~~~~~~~~~~~~~gRih~~~~~~gt~TGR~s~~~Pnlqn~p~ 160 (408)
T d2hhva2 81 KTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPI 160 (408)
T ss_dssp BCSSSBCCCHHHHHHHGGGCHHHHHHHHHHHHHHHHHTTTHHHHHHSCTTTCEECCEEESSCCSSSCCEEESSCTTCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEECCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 58788655335677750112579999999999888886533324305089985787200357654445557632146777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~r~~~~~~~g~~lv~~DysqiElRvlA~ls~D~~l~~~~~~g~D~h~~~a~~~~~~~~~~~~~~~R~~aK~~ 240 (408)
T d2hhva2 161 RLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAV 240 (408)
T ss_dssp SSHHHHGGGGGEECSSTTEEEEEEEESSHHHHHHHHHHTCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 64335023312113047845887220215199999994888899987744215665455404777888070677889987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~~~~~~grrr~~p~~~~~~~~~r~~~~ 320 (408)
T d2hhva2 241 NFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAE 320 (408)
T ss_dssp HHHHHHCCCHHHHHHHHTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSSHHHHHHHH
T ss_pred HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH
T ss_conf 61533245115546101222788999999998640116255789999999828875467984158865566676767888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 r~a~N~~iQgsaAdi~k~a~~~~~~~l~~~~~~~~lv~~VHDEiv~ev~~~~~~~~~~~~~~~M~~~~~l~vPl~~d~~i 400 (408)
T d2hhva2 321 RMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHY 400 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEECSSEEEEEEEGGGHHHHHHHHHHHHHTSSCCSSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 87760011489999999999999999984489978999763105899778999999999999995476788807865044
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
=
T Consensus 401 G~~W~e~k 408 (408)
T d2hhva2 401 GSTWYDAK 408 (408)
T ss_dssp ESSTTTCC
T ss_pred CCCHHHCC
T ss_conf 78967759
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30808.01 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~ 80 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 80 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 98699999884899999999787899988999988999999868899999999885998877999899999999869977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~ 160 (408)
T d1n11a_ 81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 160 (408)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999874100123211122024555430332222222211001001456464289999875989999999976998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 240 (408)
T d1n11a_ 161 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240 (408)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 78767409999998599999999986588400457789971024320210455555432001221247789999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g 320 (408)
T d1n11a_ 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320 (408)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred HCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC
T ss_conf 08676754420022111112478997334543028489999999779965621023445302210058621355301333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~~~~ 400 (408)
T d1n11a_ 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400 (408)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----CCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 32234689999999999986889999999987889988799998999999983999999999998736564560003668
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
=
T Consensus 401 ~~~~~~~~ 408 (408)
T d1n11a_ 401 SFPETVDE 408 (408)
T ss_dssp CCCCCCCC
T ss_pred CCCHHCCC
T ss_conf 76410149
|
| >d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Probable cysteine desulfurase SufS species: Synechocystis sp. PCC 6803 [TaxId: 1148]
Probab=100.00 E-value=0 Score=30806.94 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~a~iR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llg 80 (408)
T d1t3ia_ 1 PSLAATVRQDFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN 80 (408)
T ss_dssp CCHHHHHGGGCGGGSCEETTEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96278998758256666589986983185115799999999999998668987731519999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~ 160 (408)
T d1t3ia_ 81 ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 160 (408)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
T ss_conf 89821377505307898888764100226899889850354411211344433026825765420123320077764224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~t~lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~ 240 (408)
T d1t3ia_ 161 SEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEE 240 (408)
T ss_dssp CTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 89966999965554443358089876565214730453130104643224334678648861432357887411121033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~ 320 (408)
T d1t3ia_ 241 ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQ 320 (408)
T ss_dssp HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45308965069854344455555557733543478578999999999999999708799999999877677665225764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L 400 (408)
T d1t3ia_ 321 LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSL 400 (408)
T ss_dssp EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 23468884446754189999589899999999966996996574225587886069960999799999999999999999
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
-
T Consensus 401 ~~~~~~f~ 408 (408)
T d1t3ia_ 401 QATIRFFS 408 (408)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
T ss_conf 99999759
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30806.79 Aligned_cols=1 Identities=0% Similarity=-1.489 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~rGvNlGgWlv~E~wi~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~ 80 (408)
T d1h4pa_ 1 YYDYDHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFA 80 (408)
T ss_dssp CCCTTSCTTSSCEEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 96666787798325886515540466667315554256666555542209999998687889999999885328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T d1h4pa_ 81 NIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSN 160 (408)
T ss_dssp HHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHH
T ss_pred HHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99977998799854499934778887758158999999999999889989998378998776778877656645578168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~ 240 (408)
T d1h4pa_ 161 LAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDF 240 (408)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 99999999999999631345664234412567665666557789999999999998634668569980687770145554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~~~~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~ 320 (408)
T d1h4pa_ 241 MTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWV 320 (408)
T ss_dssp SCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHHHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCC
T ss_pred CCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCC
T ss_conf 26677786367610223541377556775543311433344543156885243112331104441256554430104413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~~~~~~~~~ 400 (408)
T d1h4pa_ 321 NGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKYP 400 (408)
T ss_dssp BTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTTEEEESCSCCSSCSTTCHHHHHHTTSSCSSTTCCSST
T ss_pred CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 67767655565446677001778899999999999999984589777852137999878889999787808896124687
Q ss_pred -------C
Q ss_conf -------9
Q 003615 112 -------C 112 (807)
Q Consensus 112 -------C 112 (807)
-
T Consensus 401 ~~cg~~~~ 408 (408)
T d1h4pa_ 401 NQCGTISN 408 (408)
T ss_dssp TGGGSCCC
T ss_pred CCCCCCCC
T ss_conf 75567889
|
| >d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: 2-oxoisovalerate dehydrogenase (E1B), PP module species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30737.89 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~p~~~~~p~p~~rp~~~~d~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~vrvld~~g~~~~~~~~~l~~e~l~~~y 80 (407)
T d1qs0a_ 1 NEYAPLRLHVPEPTGRPGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSYSLVRVLDEQGDAQGPWAEDIDPQILRQGM 80 (407)
T ss_dssp CCSCCCCCCCCCCSCCTTSCCCGGGSCCCCTTCSCCCCTTCCGGGGHHHHTSCBCCBCTTSCBCSGGGSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99898545799999999988885445568876679995568911244245670899899998998778998999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 r~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~~~aL~~~D~~f~~yR~~g~~larG~~~~~~~~e~~g~~~g~~ 160 (407)
T d1qs0a_ 81 RAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPL 160 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999669730668998849999999986797798982545799999987619999999862457877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Gr~~~~h~~~~~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvifv~eN 240 (407)
T d1qs0a_ 161 KGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVN 240 (407)
T ss_dssp TTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 78875443355323200025653346623356677776516760101245655433201888999873057626999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 N~~aist~~~~~~~~~~~~~~ra~~~Gi~~~~VDGnD~~avy~a~~~A~e~aR~g~gP~lIE~~TyR~~gHs~sDD~~~Y 320 (407)
T d1qs0a_ 241 NQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKY 320 (407)
T ss_dssp CSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGT
T ss_pred ECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 02301364111200100688888861865278625439999999998889985389746997741018988765554345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 R~~~E~~~w~~~DPI~rl~~~Li~~g~~se~e~~~i~~ei~~eV~~A~~~Ae~~~~~~~~p~P~~~~lf~~VY~e~p~~l 400 (407)
T d1qs0a_ 321 RPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHL 400 (407)
T ss_dssp SCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHH
T ss_pred CCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHH
T ss_conf 89999998883897999999999879999999999999999999999999987221036899699999845225999889
Q ss_pred ------C
Q ss_conf ------9
Q 003615 112 ------C 112 (807)
Q Consensus 112 ------C 112 (807)
-
T Consensus 401 ~eQ~~el 407 (407)
T d1qs0a_ 401 RRQRQEL 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHHC
T ss_conf 9999739
|
| >d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=100.00 E-value=0 Score=30729.71 Aligned_cols=1 Identities=0% Similarity=-1.689 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g 80 (407)
T d1eu8a_ 1 IEEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASG 80 (407)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHT
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCC
T ss_conf 97426999978976699999999999998886918999973684599999999999828999879998948899999879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~~~~~l~~~~~ 160 (407)
T d1eu8a_ 81 WLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGER 160 (407)
T ss_dssp CBCCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 93338576553113255404889987513454230276301234554161255542157988899999999999873045
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (407)
T d1eu8a_ 161 ETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEP 240 (407)
T ss_dssp TTCTTCEEEECCCSSSHHHHHHHHHHHHTTTCCSEEEETTEEEECTTCHHHHHHHHHHHHHHHTSCCSCGGGGTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 76775221234555544302446789984488611024677521469999999999999999705657632000001577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~f~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fl~~l~s~e~ 320 (407)
T d1eu8a_ 241 VRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSV 320 (407)
T ss_dssp HHHHHHTTCEEEEEECTHHHHHHTSTTCTTTTCEEEECCCBCTTSCCCCBEEEEEEEEBTTCSCHHHHHHHHHHHTSHHH
T ss_pred HHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99998568745742572888765320145455534411125678654311304202676787549999999874002789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~eal~~~~~~ 400 (407)
T d1eu8a_ 321 QKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKE 400 (407)
T ss_dssp HHHHHHHTCCCBSBTTGGGSHHHHHHCTHHHHTHHHHHTCBCCCCCTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999851888662777739875611967999999997285278888789999999999999985999999999999999
Q ss_pred ------C
Q ss_conf ------9
Q 003615 112 ------C 112 (807)
Q Consensus 112 ------C 112 (807)
=
T Consensus 401 ~~~~l~~ 407 (407)
T d1eu8a_ 401 AEELVKQ 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHCC
T ss_conf 9999576
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=100.00 E-value=0 Score=30728.62 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~v~Y~i~~drF~~gd~~~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~ 80 (407)
T d1qhoa4 1 SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDT 80 (407)
T ss_dssp CTTSCCTTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSS
T ss_pred CCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 97132057779996355506799877766555455577655667657848999998799999769988996965207765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
T d1qhoa4 81 LAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYF 160 (407)
T ss_dssp CSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSS
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67889988774012224777778998899999999866302113331201455677622222223676556676555555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~f~~~ 240 (407)
T d1qhoa4 161 DDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKS 240 (407)
T ss_dssp SCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 65555422246777786645342234456776655700332025678999876777865315643101101251467899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~i~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (407)
T d1qhoa4 241 LADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKEN 320 (407)
T ss_dssp HHHHHHHHCCCEEEECCCCCCTTSTTHHHHHHHHHHSSCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999742685345565588735667777631135665412102577888887640220146788999875201345202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~f~~nHD~~R~~~~~~~~~~~~~a~a~ll~~pGiP~iyyGdE~G~~g~~d~~~r~~~~~~~~~~~~~~~~~~L~~lR~ 400 (407)
T d1qhoa4 321 LITFIDNHDMSRFLSVNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRR 400 (407)
T ss_dssp CEECSCCTTSCCHHHHCCCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHHHHHHHHHHHH
T ss_pred HCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 12000368854401124899999999999997279868863874397899895410137866688599999999999985
Q ss_pred ------C
Q ss_conf ------9
Q 003615 112 ------C 112 (807)
Q Consensus 112 ------C 112 (807)
.
T Consensus 401 ~~paLr~ 407 (407)
T d1qhoa4 401 NNAAIQY 407 (407)
T ss_dssp HCHHHHH
T ss_pred HCHHHCC
T ss_conf 0984474
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30657.98 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (406)
T d1u2za_ 1 SSTFVDWNGPCLRLQYPLFDIEYLRSHEIYSGTPIQSISLRTNSPQPTSLTSDNDTSSVTTAKLQSILFSNYMEEYKVDF 80 (406)
T ss_dssp CCBSSCTTSCEEECCSCCBCHHHHHHCCCCCCCCCCGGGCCC------------------EEEEECSSCTTCEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEC
T ss_conf 97532587743465553020665310553379877772000477771443068876898605887324666103788850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~p~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~l~~~~ 160 (406)
T d1u2za_ 81 KRSTAIYNPMSEIGKLIEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRIIDHLETID 160 (406)
T ss_dssp SSCCSSSCHHHHHHHHHHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56524569899999999999986488489999999999999998742799999999999999999866615988876267
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~i~~~~y~r~v~p~~~~L~~Y~~fs~~vYGEl~~~~i~~Il~~l~Lkpgd~fLDLGCG~G~~vl~aA~~~g~ 240 (406)
T d1u2za_ 161 KIPRSFIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGC 240 (406)
T ss_dssp EEEHHHHHHHHHHHHHHHTGGGGGGGCSCCSSGGGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCC
T ss_conf 88889999998886446036886776266789977403478899999999838999998996789875999999997699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~ 320 (406)
T d1u2za_ 241 ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKIL 320 (406)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 76999848999999999999987555555303566520334404221654224545643999733167367999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 r~LKPGGrIVs~~~~~~~~~~it~r~~~~~~~il~v~~~~~~~~sVSWt~~~v~yyl~tv~~~i~~~~f~~~~~~R~~r~ 400 (406)
T d1u2za_ 321 QTAKVGCKIISLKSLRSLTYQINFYNVENIFNRLKVQRYDLKEDSVSWTHSGGEYYISTVMEDVDESLFSPAARGRRNRG 400 (406)
T ss_dssp TTCCTTCEEEESSCSSCTTCCCCSSSTTCGGGGEEEEEEECCTTCBTTBSSCCEEEEEEECSSCCGGGSCCC------C-
T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHCCCCCHHCCCCHHHCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 72699828999114678740145520353000033132145336633466987653739998888721462113553347
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
-
T Consensus 401 ~P~kyt 406 (406)
T d1u2za_ 401 TPVKYT 406 (406)
T ss_dssp --CCBC
T ss_pred CCCCCC
T ss_conf 888889
|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=100.00 E-value=0 Score=30657.36 Aligned_cols=1 Identities=0% Similarity=-0.627 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~~d~~~~~~di~~l~~~~~~~wpaD~g~~gP~lVRlAWHs 80 (406)
T d1itka1 1 KRPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHS 80 (406)
T ss_dssp CCCCCHHHHCTTSCCTHHHHTTSCCCSSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99986566586444773245687667989988678999876449999999999974433357544466313676555553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 AgTYR~sD~RGGanGariRfaPe~sW~~N~~LdkAr~lLepIK~kyg~~IS~ADLivLAG~vAiE~~ggp~i~f~~GR~D 160 (406)
T d1itka1 81 AGTYRTADGRGGAAGGRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 160 (406)
T ss_dssp HTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCC
T ss_pred HCCEECCCCCCCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 10011257888998762575666266777422999999999998627355443042000155564426863224557765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~~~d~~~g~~~e~~~d~~~~~~~~l~~pl~a~~~~liyv~Peg~~g~~d~~~~a~~lrd~f~rMgl~d~E~VALigG 240 (406)
T d1itka1 161 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAG 240 (406)
T ss_dssp CSSCCTTCCCCSCSSTTCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 55655554557655656666677655555430013235555688665677884115899999999824881999998750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~htlG~~hg~~~~~~~~g~~Pe~~~~~~~g~g~~~~~~~g~g~~~~~sG~~G~wT~~p~~~~N~yF~~Ll~~~w~~~~s~ 320 (406)
T d1itka1 241 GHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGP 320 (406)
T ss_dssp HTTSCEECBSSCHHHHBCCCGGGSCGGGTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECC
T ss_conf 24246335788743357878655544346764457888775765545775544455434345612100135565410036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~g~~~~~~~~~~~~~~~pda~~~~~~~~~~ml~tDlaL~~Dp~~R~iaE~YA~d~e~F~~DFa~Aw~KL~~~D~gp~~ry 400 (406)
T d1itka1 321 GGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHRDMGPPERF 400 (406)
T ss_dssp TSCEEEEESSSTTTTCEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77437526776544577756566775577503667876009878999999960999999999999999972678983345
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
=
T Consensus 401 ~gp~~p 406 (406)
T d1itka1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Burkholderia pseudomallei [TaxId: 28450]
Probab=100.00 E-value=0 Score=30657.36 Aligned_cols=1 Identities=0% Similarity=-0.727 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~wp~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~lD~~alk~di~~l~~~s~d~wpaD~G~ygp~lVRlAWHsA 80 (406)
T d1mwva1 1 NGTSNRDWWPNQLDLSILHRHSSLSDPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSA 80 (406)
T ss_dssp CCCCHHHHCTTSCCGGGGSCSCGGGCCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99886666831138741356876569898887789998750599999999999745321475534662168998888763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gTYR~~D~RGGanGg~iRfaPe~sW~~N~~Ldkar~lLepIK~ky~~~IS~ADLivLAG~vAiE~~Gg~~i~f~~GR~d~ 160 (406)
T d1mwva1 81 GTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRADT 160 (406)
T ss_dssp TTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred CCCCCCCCCCCCCCCEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCC
T ss_conf 24104579889987615775443578754679999999999997477754233256620788987369813777676664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Plaa~~~gliyvnpeg~~g~pd~~~~a~~lrd~f~rMglnd~E~vAL 240 (406)
T d1mwva1 161 WEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVAL 240 (406)
T ss_dssp SSCCCCCCCSCSSTTCCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 33223556644443454456544566753334764444456666687645688970235899999987606870889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~G~HtlG~~hg~~~~~~~g~~pe~~~~~~~g~gw~~~~~~g~~~~~~~sg~eG~wT~~P~~~dN~yF~~Ll~~~we~~~ 320 (406)
T d1mwva1 241 IAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTK 320 (406)
T ss_dssp HHHHTTSCBCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEE
T ss_pred HHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEC
T ss_conf 86432211135788510047754567510025666666554577766778873676799761116888656447645520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 s~~g~~q~~~~~~~~~~pda~~~s~~~~~~ml~tDlal~~Dp~~R~iaE~YA~d~e~F~~dFa~AW~KLm~~Dmgp~~~y 400 (406)
T d1mwva1 321 SPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTHRDMGPRARY 400 (406)
T ss_dssp CTTCCEEEEETTCCSCEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
T ss_conf 45655245645755577766588777476402443333029888999999962999999999999999974688980202
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
=
T Consensus 401 ~g~~~p 406 (406)
T d1mwva1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 699999
|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Synechococcus sp. pcc 7942 [TaxId: 1140]
Probab=100.00 E-value=0 Score=30656.61 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~wp~~~~~~~l~q~~~~~~p~~~~~~y~~~~~~ld~a~k~Dl~~l~~~s~~~wpaD~G~ygP~lVRlAWhsAgTYR 80 (406)
T d1ub2a1 1 STAEWWPKALNLDILSQHDRKTNPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYR 80 (406)
T ss_dssp CTTSSCTTSCCGGGGSCSCTTTCCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 97555887768521015887679899997889999999999999999997455234755457621377865554014321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~sD~RGGanGgriRfaP~~sW~~N~~LdkAr~lL~pIK~ky~~~IS~ADLivLAG~vAiE~agg~ti~f~~GR~Da~~~~ 160 (406)
T d1ub2a1 81 IADGRGGAGTGNQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPE 160 (406)
T ss_dssp TTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCC
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 67898899877446822304566318899999998887642876531137776129999873498335677766666776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~dv~~g~~~e~l~~~~~~~~~~~~~~~l~~pl~a~~~~liyvnP~g~~g~pd~~~~a~~ir~~f~rM~mnd~E~vAL~aG 240 (406)
T d1ub2a1 161 KDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAG 240 (406)
T ss_dssp TTCCCCSCSSSSCCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 55455554455788767544467754322465420157311177534678974555788655677753788998642153
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~ht~Gk~hg~~~~~~~g~~p~g~~~e~~g~~~~n~~~~g~g~~t~tSg~eg~wt~~p~~~dn~yF~~ll~~~~W~~~ks~ 320 (406)
T d1ub2a1 241 GHTVGKCHGNGNAALLGPEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNP 320 (406)
T ss_dssp HHTSCCBCBCSCSTTBCCCGGGSCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCC
T ss_conf 31002136777501237655565410067766777773646666688888777656443467412333205640102453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~ga~q~~~~~~~~~~~~~~~~d~s~~~~~~mt~tDLal~~Dp~~R~iaE~Ya~d~e~F~~dFa~AW~KL~~~Dmgp~~~~ 400 (406)
T d1ub2a1 321 AGAWQWEPINPREEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTHRDMGPKARY 400 (406)
T ss_dssp TSCEEEEESSCCGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHC
T ss_conf 30114455675323477755477777577503567763108878999999971999999999999999971677976531
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
=
T Consensus 401 ~g~~~p 406 (406)
T d1ub2a1 401 IGPDVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Alkaline phosphatase-like superfamily: Alkaline phosphatase-like family: Phosphonoacetate hydrolase domain: Phosphonoacetate hydrolase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30656.05 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~vi~I~iD~l~~~~l~~~~~~~~TPnid~La~~G~~f~~~~~~~~~c~PsrasllTG~yp~~hG 80 (406)
T d1ei6a_ 1 TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHG 80 (406)
T ss_dssp CCEEEETTEEEECCSSCEEEEECTTCCHHHHHHHHHTTSCHHHHHGGGTSEEEEEECCSSCCHHHHHHHHHHTSCHHHHC
T ss_pred CCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC
T ss_conf 96484786104678998899997899978874005557991899999689348322049971589999999678988879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T d1ei6a_ 81 ICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENIL 160 (406)
T ss_dssp CCSSEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCSEEEESTTCSSCCHHHHSCCCHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 57775446554410100332123456544311123465302114565645555430321456567786523444543221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~i~~l~~~~~~~~~~~d 240 (406)
T d1ei6a_ 161 ARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITAD 240 (406)
T ss_dssp HHHTCCCCCSSSTHHHHHHHHHHHHHHHTTCCSEEEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 10233222123332102444432220247884201123433334456899889999999999999999867966999934
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d1ei6a_ 241 HGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLT 320 (406)
T ss_dssp CCCEECBCTTSCBCEEEHHHHHHHHHCTTSEEEECTTSCTTCCBGGGCBSEEEEEECTTSCHHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHCC
T ss_conf 54345675223320232144201110110000245422210000122320234313327899999998752365223304
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~igdii~~sd~g~~lg~~~~~~~~s~~~~~~~~hGg~~e~~VPlIi~~P~~~~~~~~~i~~~Di~d~ 400 (406)
T d1ei6a_ 321 RSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLDSPGRLRNFDIIDL 400 (406)
T ss_dssp HHHHHHHHTCCGGGSCSEEEEECTTCEEESCTTTCBGGGCCSCCEECCSGGGCEEEEEESSCBCCCC--CCCBGGGHHHH
T ss_pred HHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHH
T ss_conf 98999973999787466999956996877455445433467767565651147308799558656777884325061887
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
.
T Consensus 401 ~~~~~~ 406 (406)
T d1ei6a_ 401 ALNHLA 406 (406)
T ss_dssp HHHCBC
T ss_pred HHHHCC
T ss_conf 763039
|
| >d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase T species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30653.40 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~~~d~~i~r~~~~~a~~e~l~~~p~ 80 (406)
T d2ayia1 1 AFKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVIYGDQELARKRLALAPEEGLDKAPA 80 (406)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEECCHHHHHHHHHHSCTTCTTCCCH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCH
T ss_conf 96799999999999971268999989997166569999999999998699738996067699999996399988743624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~a~i~I~~~np~~l~~vdp~ki~~~~ka~~~~~~~~~~~~~~~~~~W~i~~~P~~~~A~~~~~~l~~ 160 (406)
T d2ayia1 81 WLYEGMARAFREGAARLAVSGSDPKALEGLPPEKVGRAQKANARAYKPALEAITEFVTNWTIVPFAHPGWARAVFPGLPE 160 (406)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCBCBEECCCTTTHHHHCCCSCH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCH
T ss_conf 46889999997189289961698520126996899999998899879999998536566399975782177661789767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~e~~~~l~d~if~~~~ld~~dp~~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~GTDL~~~i~~~~~w~~~~~~~~~g~~~ 240 (406)
T d2ayia1 161 EEAVRRLWEAIFQATRADQEDPIAAWEAHNRALHEKVAYLNARRFHALHFKGPGTDLVVGLAEGHLWQGGATATKGGRLC 240 (406)
T ss_dssp HHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTEEEEEECCTTBCCEESSCCCSSSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999976346651079999999999999999985165148996389369999945884015887642278767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~NlP~GEvftaP~e~svnG~i~~d~~~~~~g~l~~~i~l~f~~G~vv~~~~~~~~~~l~~~~~~d~~a~~lgE~~ig~n 320 (406)
T d2ayia1 241 NPNLPTEEVFTAPHRERVEGVVRASRPLALGGTLVEGIFARFERGFAVEVRAEKGEEVLRRLLDTDEGARRLGEVALVPA 320 (406)
T ss_dssp CSBSSCCCEEECCCTTCEEEEEECSSCEEETTEEEBSCEEEEETTEEEEEECSBCHHHHHHHTTSSSGGGSEEEEECCCT
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 68899832585020484211998045454433303473799948879997557649999987624867636788876047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~n~L~DE~gt~Hia~G~~Y~~~~~g~~~~~~~~~~g~n~s~~H~D~~~~~~~~~~dgv~~dG~~~~i~~ 400 (406)
T d2ayia1 321 DNPIAKTGLVFFDTLFDENAASHIAFGQAYQENLEGRPSGEAFRKRGGNESLVHVDWMIGSEEMDVDGLYEDGTRTPLMR 400 (406)
T ss_dssp TSHHHHHTCCCCCHHHHHTTSCEEEEECCCGGGBCC---CCSHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEE
T ss_conf 88540345111330587478604766876411134788756763079806644786713887178999984891889988
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
-
T Consensus 401 ~G~f~i 406 (406)
T d2ayia1 401 RGRWVV 406 (406)
T ss_dssp TTEECC
T ss_pred CCEEEC
T ss_conf 989969
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=100.00 E-value=0 Score=30650.16 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~viY~i~~drF~~g~~~~d~~~~~~~~~~~~~~~~~gGdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~ 80 (406)
T d3bmva4 1 ASDTAVSNVVNYSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPV 80 (406)
T ss_dssp CCTTSTTCTTCCTTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCE
T ss_pred CCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCC
T ss_conf 98766678888753708996123306899777878876577777657667858999987448888987597789979753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~ 160 (406)
T d3bmva4 81 ENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYD 160 (406)
T ss_dssp EECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEE
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 56544567777789712127665235456844461899999999997436431365201566566522012034675356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~~~~~giDGfR~D~~~~~~~~~~ 240 (406)
T d3bmva4 161 NGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQ 240 (406)
T ss_dssp TTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEESCGGGSCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 87411466545566434556764445666311245554210226689999999887777530777532245444632568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d3bmva4 241 KNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDYNFIND 320 (406)
T ss_dssp HHHHHHHHHHSCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99988888753212334333455100022110247776500122023788876405740267789987620013443344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~fl~nHD~~R~~~~~~~~~~~~a~~~~lt~pG~P~IyyGdE~g~~g~~dp~~r~~~~~~~~~~~~~~~~~~Li~lRk~ 400 (406)
T d3bmva4 321 MVTFIDNHDMDRFYNGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKS 400 (406)
T ss_dssp CEECSCCSSSCCSCCSSCSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHHHHTTHHHH
T ss_pred HCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 32566677646660688799999999999971797777657653868998824440489877896999999999999863
Q ss_pred -----C
Q ss_conf -----9
Q 003615 112 -----C 112 (807)
Q Consensus 112 -----C 112 (807)
.
T Consensus 401 ~paLry 406 (406)
T d3bmva4 401 NPAIAY 406 (406)
T ss_dssp CHHHHH
T ss_pred CHHHCC
T ss_conf 944159
|
| >d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=30585.27 Aligned_cols=1 Identities=0% Similarity=-1.722 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~ 80 (405)
T d1kl1a_ 1 MKYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQ 80 (405)
T ss_dssp CCHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 93155549999999999999997691586067767899999856752475768899964607762299999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lF~a~~anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~ 160 (405)
T d1kl1a_ 81 LFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKAR 160 (405)
T ss_dssp HHCCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHH
T ss_pred HHCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCHHHHHHHHH
T ss_conf 83999414414676588999999844899878873035566445676223364588877732313025313999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrgg~I~~~~ 240 (405)
T d1kl1a_ 161 LHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE 240 (405)
T ss_dssp HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCCCEEEECC
T ss_conf 62765377523146665586999998764198786035667665443126984652110323355334677773587500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (405)
T d1kl1a_ 241 QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQ 320 (405)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCC
T ss_conf 35777776508653468415678899999998738388999999999888999998648943435887664563243446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~~~~~~~~~~ir~~V 400 (405)
T d1kl1a_ 321 QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEARQRV 400 (405)
T ss_dssp TCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 77499999999980959767869899999998872265688998589988999999999999996589679999999999
Q ss_pred ----C
Q ss_conf ----9
Q 003615 112 ----C 112 (807)
Q Consensus 112 ----C 112 (807)
=
T Consensus 401 ~~L~~ 405 (405)
T d1kl1a_ 401 AALTD 405 (405)
T ss_dssp HHHHC
T ss_pred HHHHC
T ss_conf 99639
|
| >d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Proton glutamate symport protein superfamily: Proton glutamate symport protein family: Proton glutamate symport protein domain: Proton glutamate symport protein species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=30582.22 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 l~~rili~lv~Gi~~G~~~~~~~~~~~~~~~l~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~ 80 (405)
T d2nwwa1 1 VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL 80 (405)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTTHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
T ss_conf 98899999999999999972222127899999989999999999999999999999999745501002089999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 tt~iA~~igl~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~Ni~~al~~~~~l~vi~fail~Gial~~~~~~ 160 (405)
T d2nwwa1 81 TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNS 160 (405)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCCCCCCCCCCCCCCCCCHHHHHGGGSCSCHHHHHHSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999860133322000000014311001899999705587899964678630356788889999985022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~l~~~~~~l~~v~~kii~~im~laPigvf~l~a~~~~~~g~~~l~~l~~~~~~~~~~~~l~~~~~~~i~~ 240 (405)
T d2nwwa1 161 ENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLL 240 (405)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00345667889999999999999999898887778889999998753334555567899999999999999888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~~~~~~~~gv~~~i~~fvlPlgatin~~G~a~~~~~~~~f~a~~~g~ 320 (405)
T d2nwwa1 241 KIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGS 320 (405)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHCCTGGGHHHHHHHHHTTTCCTTTHHHHTTTTSSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 98289848884322310421200166556617899999975999352010236302100364124899999999987197
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~l~~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~glP~~~~~~~~~i~li~~id~l~D~~rT~~Nv~gd~~~a~i 400 (405)
T d2nwwa1 321 HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAI 400 (405)
T ss_dssp CCCSSTTHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
T ss_conf 99989999999999999986178616799999999998699886410565888887498550550898828776588841
Q ss_pred ----C
Q ss_conf ----9
Q 003615 112 ----C 112 (807)
Q Consensus 112 ----C 112 (807)
=
T Consensus 401 v~k~e 405 (405)
T d2nwwa1 401 VAKTE 405 (405)
T ss_dssp HHHHC
T ss_pred EECCC
T ss_conf 33579
|
| >d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=30581.08 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~~ 80 (405)
T d1h6za3 1 VAKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKEM 80 (405)
T ss_dssp CCCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99747997399865578455750568899899999786999998886299999999738976889999999997664776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 160 (405)
T d1h6za3 81 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 160 (405)
T ss_dssp CCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTSTT
T ss_pred HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 66523543115553023210122100455666665456689998742550566899999999763011246305678898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~~ 240 (405)
T d1h6za3 161 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 240 (405)
T ss_dssp THHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
T ss_conf 88888751651124572888887888999866541387541054677678888987620572377778761754113331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (405)
T d1h6za3 241 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 320 (405)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCSCCEESSHHHHHHHHTTSSCCHHHHHHHSCC
T ss_pred HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCHHHCCCCCEECCCCCCCC
T ss_conf 11234542135665443334556777898753368646676233213765770466403310100145321104665545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~l~~e~~~~La~l~~~iE~~fg~PqDIEWAi~dg~L~ILQaRPv~~t~~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 400 (405)
T d1h6za3 321 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 400 (405)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHHTSSCHHHHHHTSCGGGG
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
T ss_conf 55528799999999999999982998204999989989999766788668889999999997699798999872798278
Q ss_pred ----C
Q ss_conf ----9
Q 003615 112 ----C 112 (807)
Q Consensus 112 ----C 112 (807)
-
T Consensus 401 ~~~~~ 405 (405)
T d1h6za3 401 DHLMH 405 (405)
T ss_dssp GGGGC
T ss_pred HHHCC
T ss_conf 67448
|
| >d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30574.72 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 m~d~~~vR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~ 80 (405)
T d1jf9a_ 1 IFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN 80 (405)
T ss_dssp CCCHHHHHHTCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHCHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98979998758211467189982997382006899999999999998666987630409999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i 160 (405)
T d1jf9a_ 81 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 160 (405)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHC
T ss_conf 98755430237688897788842331026789989998375331699999999973968999877998838799999753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~t~lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~ 240 (405)
T d1jf9a_ 161 DEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEA 240 (405)
T ss_dssp CTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEECHH
T ss_conf 69957999966777655438467766678873975641554000015653333078646613230156887510242265
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~ 320 (405)
T d1jf9a_ 241 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP 320 (405)
T ss_dssp HHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54036863223565675344555655553224307787677899999999999981849999999999988776651388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i 400 (405)
T d1jf9a_ 321 DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 400 (405)
T ss_dssp TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 65556876767479997389899999999987892997660321567886099988999788999999999999999999
Q ss_pred ----C
Q ss_conf ----9
Q 003615 112 ----C 112 (807)
Q Consensus 112 ----C 112 (807)
-
T Consensus 401 ~r~~~ 405 (405)
T d1jf9a_ 401 HRLLG 405 (405)
T ss_dssp HHHHC
T ss_pred HHHCC
T ss_conf 99609
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30574.47 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~g~~~~~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~ 80 (405)
T d1lnsa3 1 LDNHYHFFNDKSLATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHD 80 (405)
T ss_dssp CCSSCCEETTEECSCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCC
T ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98855433783413205887568688982888878899874799999742889974599996786787766544322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~ 160 (405)
T d1lnsa3 81 MNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQ 160 (405)
T ss_dssp CCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 65433445543333233454222234555665555654455664445568898679879997888788999755468866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G 240 (405)
T d1lnsa3 161 QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENG 240 (405)
T ss_dssp HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCC
T ss_conf 63009999999871563333433443211454387458995289999999998608865419994476655888754178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~G 320 (405)
T d1lnsa3 241 LVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHG 320 (405)
T ss_dssp SBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEE
T ss_conf 40035421255666653146655555400221115565154203455541233233555536853565137988899975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 w~D~~v~~~~~~~~y~al~~~~~~~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~LkG~~ng~~~~~~~~~~~~g~~~W~ 400 (405)
T d1lnsa3 321 LQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLDRDLNLNLPPVILQENSKDQVWT 400 (405)
T ss_dssp TTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCCCCCCCCSEEEECTTSSSCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 06889897899999999873799379995887899765555369999999999986889889898987999737999741
Q ss_pred ----C
Q ss_conf ----9
Q 003615 112 ----C 112 (807)
Q Consensus 112 ----C 112 (807)
=
T Consensus 401 ~~~~W 405 (405)
T d1lnsa3 401 MMNDF 405 (405)
T ss_dssp EESCS
T ss_pred CCCCC
T ss_conf 08989
|
| >d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Kynureninase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30501.68 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~d~~d~l~~~R~~F~~~~~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA 80 (404)
T d1qz9a_ 1 TTRNDCLALDAQDSLAPLRQQFALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLA 80 (404)
T ss_dssp CCHHHHHHHHHTCTTGGGGGGBCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 96699997567781899985189999989867851033789999999999998750467565552328999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~llga~~~ei~~~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
T d1qz9a_ 81 TLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQA 160 (404)
T ss_dssp TTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHH
T ss_pred HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECEECCCCCCCHHHHHH
T ss_conf 99689987579956706777777655555420357885799962543347788775422132100010354542668986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~~~T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~ 240 (404)
T d1qz9a_ 161 IDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWV 240 (404)
T ss_dssp CSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred CCCCCEEEEEECCCCCCCCEECHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEEEE
T ss_conf 69884599984245555616238997310324443326885123321233444454509998050214668856999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 320 (404)
T d1qz9a_ 241 SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELV 320 (404)
T ss_dssp CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36556307863223577555522234544335604554320010467888777888877668999999987678999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~ 400 (404)
T d1qz9a_ 321 EQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 400 (404)
T ss_dssp HHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75435898799788883120139999169999999999888989862599869997997789999999999999999971
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
.
T Consensus 401 ~~~~ 404 (404)
T d1qz9a_ 401 KTWA 404 (404)
T ss_dssp TTTC
T ss_pred CCCC
T ss_conf 7889
|
| >d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-CAM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30501.15 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 l~p~p~~~p~~~~~d~d~~~p~~~~~dp~~~~~~lr~~~~~~~~~~~~~~g~w~vtr~~dv~~vl~d~~~Fss~~~~~~~ 80 (404)
T d1re9a_ 1 LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPR 80 (404)
T ss_dssp CCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHGGGGSTTSCSEEEECGGGCEEEECSHHHHHHHHHCTTTEETTSCSSSH
T ss_pred CCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98877999832266789898577632818999999960899779856999989976999999997699757689987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~D~p~H~~~R~~l~~~Fs~~~l~~~~~~i~~~~~~ll~~~~~~g~~D~v~~~a~~l~~~vi~~llG~p 160 (404)
T d1re9a_ 81 EAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLP 160 (404)
T ss_dssp HHHHHCCCTTTTCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 44333456654578889999997526757843189998999999999974421467346420344577888799987420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~li~~~r~~~~~d~~~~~~~~~~~~~~~~~~e~~~~~~~l~~ag~ 240 (404)
T d1re9a_ 161 EEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGL 240 (404)
T ss_dssp GGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02102321335655431226899999999999999998887506654402333100233345758899999999998763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 eTt~~~l~~~~~~L~~~p~~~~~l~~~~~~~~~~v~E~lR~~~p~~~~r~~~~~~~~~G~~ip~G~~V~~~~~aanrDp~ 320 (404)
T d1re9a_ 241 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDER 320 (404)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCCBCCEEEESSCEEETTEEECTTCEEECCHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 34678899999997550588999876410111123342234553333433223200388667640233243675367854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~f~dPd~F~p~R~~~~hl~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~g~~~lpv~~~P~~ 400 (404)
T d1re9a_ 321 ENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPAT 400 (404)
T ss_dssp TSSSTTSCCTTCSSCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCCEECSSBCEESCCEEECCGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCEEEEEEEEECC
T ss_conf 47993331889999998877998616801999999999999999997898589999964315887258543468992068
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
-
T Consensus 401 ~~~~ 404 (404)
T d1re9a_ 401 TKAV 404 (404)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 6869
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30501.23 Aligned_cols=1 Identities=0% Similarity=-0.625 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~P~Pi~~~~Dp~dR~v~~~P~~~~pyD~R~~i~g~~~~~~~~~~i~D~~sF~E~~~~~a~svVtG~ARL~G~PVGVIAn 80 (404)
T d1uyra2 1 NMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGV 80 (404)
T ss_dssp TSCCCCCCCSSCSSSCCCCCCCSSSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTTSCTTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 98989789999800135657899999777999846755555445010287025520046786699999999999999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 e~~~~~g~i~aDpa~~~s~~~~~~~~Ggv~~p~sA~K~A~~i~d~cd~~~lPLi~l~D~pGF~~G~~~E~~gilr~GA~i 160 (404)
T d1uyra2 81 ETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFI 160 (404)
T ss_dssp CCSCEEEEECCCTTCSSCCCEEEEECTTCBCHHHHHHHHHHHHHHHTTSCCCEEECCCCCCBCC------CTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 76102687568755653055565404786685579999999998652346645886137766676899987899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~A~~~~~vP~i~vI~~~g~~~GGa~vv~~~~~~~~~~~~yAwP~a~~gVm~pEGav~I~fr~e~~~~~~~r~d~~~~el 240 (404)
T d1uyra2 161 VDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYREL 240 (404)
T ss_dssp HHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGGTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHC-------
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEECCHHHHCCHHHHHHHHHHH
T ss_conf 99998548997999957864130234103676677655488878654106786654321033021113265568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~~a~e~~~~l~~~i~~re~~l~p~y~qvA~~Fadlhdt~~Rm~~kG~I~~iv~w~~tR~~~~~~lrr~l~e~~ 320 (404)
T d1uyra2 241 RSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEY 320 (404)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTTSSHHHHHHHTCSSEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98725755587789999999999999862789999999998508687898568466122878859999999999874999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (404)
T d1uyra2 321 LIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQDLAKKIRSDHDNAIDGLS 400 (404)
T ss_dssp HHHTTTTCCSSCCHHHHHHHHHTTSCTTSCTTCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999985777787999999999987346865639999999847799999999998999999999997539088999999
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
=
T Consensus 401 ~~~~ 404 (404)
T d1uyra2 401 EVIK 404 (404)
T ss_dssp TCCC
T ss_pred HHHC
T ss_conf 9849
|
| >d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Plasmodium yoelii yoelii [TaxId: 73239]
Probab=100.00 E-value=0 Score=30500.83 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~y~p~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~ 80 (404)
T d1z7da1 1 KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFS 80 (404)
T ss_dssp CCHHHHHHHHHHHBCCCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 98799997787617888999885699946388997998999983306887846259699999999999857886665102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~ 160 (404)
T d1z7da1 81 VPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 160 (404)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999997444314433024410243037789999998875213443222442222245788744333456554455677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~ 240 (404)
T d1z7da1 161 GPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC 240 (404)
T ss_dssp -----CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 88876300236656899999706997799999778388897409999999999999881978999767547774434345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~ 320 (404)
T d1z7da1 241 VHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 320 (404)
T ss_dssp GGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
T ss_conf 00059887778872311289887554456399871478998576889895013555544344300003443001015789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~al 400 (404)
T d1z7da1 321 ENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTV 400 (404)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999975699727887527199999748865599999999969938943899989997986789999999999999999
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
=
T Consensus 401 k~~~ 404 (404)
T d1z7da1 401 KFFD 404 (404)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9629
|
| >d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30500.33 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~ 80 (404)
T d2byla1 1 GPPTSDDIFEREYKYGAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAF 80 (404)
T ss_dssp CCCCHHHHHHHHHHHBCSCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98967999999877546788987844898454999979879999926889988553798999999999996478755643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~ 160 (404)
T d2byla1 81 YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYD 160 (404)
T ss_dssp EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 31049999876543011332220147666403589999987640366312311223357884556510340577865455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~p~~~~~~~~p~~d~~~l~~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~ 240 (404)
T d2byla1 161 GFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW 240 (404)
T ss_dssp TSCSCCTTEEEECTTCHHHHHHHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
T ss_conf 77888887157346679999985579986999978843888971499999999999998628079960465364635533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 320 (404)
T d2byla1 241 LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 320 (404)
T ss_dssp SGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CHHHHCCCCCCEEEECCHHHCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 33654699988999774646898662104521023312578887859886999999999999999854703566676688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 l~~~l~~l~~~~i~~vRg~Gl~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~a 400 (404)
T d2byla1 321 LRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKT 400 (404)
T ss_dssp HHHHHHTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 99999960136631356246289999826886129999999996991992489998999799678999999999999999
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
.
T Consensus 401 l~~f 404 (404)
T d2byla1 401 ILSF 404 (404)
T ss_dssp HHTC
T ss_pred HHCC
T ss_conf 9729
|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Alpha-amylase AmyC species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30499.34 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~k~~l~lvlH~HqP~~~~~~~~~~~ee~W~~~~~~~~Y~pll~~l~~~~~~r~t~n~sP~LleQL~D~~~~~~f~~~~~~ 80 (404)
T d2b5dx2 1 MRGKILIFLHAHLPYVHHPEYDHFLEERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHMEK 80 (404)
T ss_dssp CCEEEEEEEEECCCCCCCTTCSSCTTHHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 93489999945888644899886443669999999988999999985868619998779999987586756446999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~r~L~~~G~vEll~~~y~Hpilpll~~~~e~~~ 160 (404)
T d2b5dx2 81 LIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVN 160 (404)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHH
T ss_conf 99986666552234204788999999999999999999966478999999997698048723520123455049869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Qi~~g~~~~~~~fG~~P~G~W~pE~a~~~~l~~~l~~~Gi~~~~~d~~~l~~~~~~~~~~~~~p~~~~~~~~~~~rd~~ 240 (404)
T d2b5dx2 161 AQITVGVKNYEKHMKKHPRGIWLAECGYYQGLDLYLAQNNVEYFFVDSHAFWFADEQPRYGVYRPIMTPSGVFAFARDPE 240 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEECGGGCBCTTHHHHHHHTTCCEEEECTHHHHTSSSCCTTGGGSCEECTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 99999999999986999988978753558769999997798699968335523577887666576215886157742510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~vws~~~G~pg~~~~~~~~~~~~~~~~~~~i~~~frd~~ls~~igf~y~~~~~~~~~~~~k~~Yd~~~A~~~a~~~a 320 (404)
T d2b5dx2 241 SSEQVWSAAVGYPGDPRYREFYRDIGFDREMEYIKDYIDPSGVRINTGIKYHRITSKSLDASQKEYYDIDLAMEAVEEHA 320 (404)
T ss_dssp GCGGGGCTTTSGGGCTTSBCTTCCHHHHSCHHHHGGGSCTTSCCCCCSCCCBBCCSSCSCGGGCCBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 01235414568878842121024533467776135764477632011402303566446643234479899999999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~f~~~~~~~~~~~~~~~~~~~vv~i~~DgE~fGh~w~eG~~fL~~l~~~l~~~~~i~~~T~se~l~~~~~~~~~~l~~g 400 (404)
T d2b5dx2 321 RDFLHKKESQARRLMDIMGVEPVIVAPFDAELFGHWWFEGVFFLKRFFELVNESKDLKLVTASEVIDTLEEVQIATPADS 400 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHHCSSEEECCHHHHHHHCCCCCBCCCCSB
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999876523689987999755132066713379999999999863898389769999986899772230799
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
-
T Consensus 401 SWg~ 404 (404)
T d2b5dx2 401 SWGA 404 (404)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 9998
|
| >d1h12a_ a.102.1.2 (A:) Endo-1,4-beta-xylanase {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Endo-1,4-beta-xylanase species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=0 Score=30496.74 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~a~~~~~y~n~~~~~~~~~i~~k~~~~~~~~f~~~~~~~~y~~~~~~~~~~~~~~~~i~d~~~~dv~SEGq 80 (404)
T d1h12a_ 1 AFNNNPSSVGAYSSGTYRNLAQEMGKTNIQQKVNSTFDNMFGYNNTQQLYYPYTENGVYKAHYIKAINPDEGDDIRTEGQ 80 (404)
T ss_dssp CCCSSCCSSCHHHHCCCCCHHHHTTCCSHHHHHHHHHHHHSSSCSSSCCEEEEEETTEEEEEEEEECCTTTCCEEEHHHH
T ss_pred CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98888787761333755478898619999999999999971789884489971687665200012255479986654378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gYGMl~Av~~ndr~~FD~Lw~Wt~~~l~~~d~~~~~~~~gL~aW~~~~~~~~~~~v~d~nsAtDGDl~iA~ALl~A~~~W 160 (404)
T d1h12a_ 81 SWGMTAAVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARW 160 (404)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999809999999999999998604555444455677613345888987556889999768999999999999861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~~~Y~~eA~~il~~i~~~~~~~~~~~l~P~~~~f~nPSY~~P~~~~~fa~~~~~~~~~~~W~~v~~~s~~ll~~~~ 240 (404)
T d1h12a_ 161 GNSGEFNYYNDAITMLNTIKNKLMENQIIRFSPYIDNLTDPSYHIPAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF 240 (404)
T ss_dssp CSSSSCCHHHHHHHHHHHHHHHSEETTEECSCTTCSSCBCGGGCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89407799999999999888740578852556875578686325489999999860577540889999999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~s~~p~~gL~~d~~~~dg~~~~~~~~~~~~~~~~~~~yDA~Rvpl~~a~dy~w~~~d~~~~~~~~~~~~f~~~~~~~~ 320 (404)
T d1h12a_ 241 TKVSGSPHWNLPTFLSRLDGSPVIGYIFNGQANPGQWYEFDAWRVIMNVGLDAHLMGAQAWHKSAVNKALGFLSYAKTNN 320 (404)
T ss_dssp HHHSSTTTTTCCCSCBCTTSCBCCSCCSTTCCSCTTEECTTTHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 13467887789957872489736676667676778865502888778998887505888455799999999999875026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~~G~~~~~~~~~g~~a~~a~a~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~L~~ll~lsG~~r~~ 400 (404)
T d1h12a_ 321 SKNCYEQVYSYGGAQNRGCAGEGQKAANAVALLASTNAGQANEFFNEFWSLSQPTGDYRYYNGSLYMLAMLHVSGNFKFY 400 (404)
T ss_dssp TTSSCBSCEETTEECSSCBCCHHHHHHHHHHGGGCCCHHHHHHHHHHHHTCCCCCSTTHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 88877631316896478888889999999999864793789999999970357888888789999999999963984772
Q ss_pred ---C
Q ss_conf ---9
Q 003615 112 ---C 112 (807)
Q Consensus 112 ---C 112 (807)
-
T Consensus 401 ~~~~ 404 (404)
T d1h12a_ 401 NNTF 404 (404)
T ss_dssp CCC-
T ss_pred CCCC
T ss_conf 4579
|
| >d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Multiple substrate aminotransferase, MSAT species: Thermococcus profundus [TaxId: 49899]
Probab=100.00 E-value=0 Score=30423.05 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~s~ire~~~~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~ai 80 (403)
T d1wsta1 1 INFDSFFSEKAMLMKASEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLAL 80 (403)
T ss_dssp CCGGGGCCHHHHHCCCHHHHHHHHHHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98789999998508981899999972899958899978895206989999999999974760014889986779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 160 (403)
T d1wsta1 81 ARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEK 160 (403)
T ss_dssp HHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 99999984899876773642221178899999986268755567886303567776404540267523667743112122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S 240 (403)
T d1wsta1 161 LEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGT 240 (403)
T ss_dssp HHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHEECCCCCCCCCCCCCCCCCEEEECC
T ss_conf 00011101343212322466898786399999999998887449265345021212347887874345677770799845
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~SK~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 320 (403)
T d1wsta1 241 FSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE 320 (403)
T ss_dssp STTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55133685663444456578899999876402345530145677654114430467889999888999999999864668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l~~~~ 400 (403)
T d1wsta1 321 GVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEM 400 (403)
T ss_dssp TCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 73780788146999989999999999999997897999336636899989979999567999999999999999999998
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
-
T Consensus 401 k~~ 403 (403)
T d1wsta1 401 KRV 403 (403)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 449
|
| >d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyC species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30422.24 Aligned_cols=1 Identities=0% Similarity=0.569 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~dP~~~~~~lR~~gPv~ri~~~~~~~~g~~~~w~vt~~~~vr~vl~d~~~fss~~~~~~~ 80 (403)
T d1ueda_ 1 DIDQVAPLLREPANFQLRTNCDPHEDNFGLRAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQS 80 (403)
T ss_dssp CCCSCCCEEECCTTTTCEETTEECHHHHHHHTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC---
T ss_pred CHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 93234767688344023117997699999995399798516776435888489979999999997598646488665644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~l~~~Dg~~h~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~ 160 (403)
T d1ueda_ 81 KSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALCE 160 (403)
T ss_dssp ------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55442202216764157815799999998686597999876179999999999874124875203566654456666677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rr~~~~~~~~~~~~~~~~~~ls~~~l~~~~~~~l 240 (403)
T d1ueda_ 161 LLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALI 240 (403)
T ss_dssp HHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 73260333456655554302301567888877777899999999999862133115555422366466888877788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~R~~~~d~~~~G~~ip~G~~V~~~~~~ 320 (403)
T d1ueda_ 241 LGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILM 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHC
T ss_conf 40104678999999999862320101122202442212333202223344322010134645589743333210001000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~rdp~~f~dP~~F~PeR~~~~~lpFG~G~r~CiG~~lA~~el~~~l~~Ll~~f~~~~l~~~~~~~~~~~~~~~~~~~lp 400 (403)
T d1ueda_ 321 ANRDEALTPDPDVLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCPDQVP 400 (403)
T ss_dssp HTTCTTTSSSTTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCBSCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCEECCEEEE
T ss_conf 25783227994243889999999979998846918999999999999999996797788988776544477510764656
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
-
T Consensus 401 v~f 403 (403)
T d1ueda_ 401 VTW 403 (403)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 569
|
| >d1xksa_ b.69.14.1 (A:) Nuclear pore complex protein Nup133 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nuclear pore complex protein Nup133 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30420.64 Aligned_cols=1 Identities=100% Similarity=0.204 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~ve~~g~~LPv~V~EaLt~a~~~~~~s~~~s~~G~awvv~g~~l~VW~y~~s~~~~~~~C~~L~LP~sdl~~~a~ 80 (403)
T d1xksa_ 1 ESVNYDVKTFGSSLPVKVMEALTLAEVDDQLTINIDEGGWACLVCKEKLIIWKIALSPITKLSVCKELQLPPSDFHWSAD 80 (403)
T ss_dssp CCSSEEEEECSSCCCHHHHHHHHHCCTTSCEEEEECTTSEEEEEETTEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 97542676778987688998862057887447999899679999799999971578887787521797189645455676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Lv~v~~~~~~~~~~~~~~~gvi~vs~tG~VryW~sI~~~~s~~e~~i~l~~~E~~~~l~~~e~~g~ilatstg~l~l~~~ 160 (403)
T d1xksa_ 81 LVALSYSSPSGEAHSTQAVAVMVATREGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIP 160 (403)
T ss_dssp GEEEEECC-------CTTEEEEEECTTCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCEEEECHHCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCEEEEEEEC
T ss_conf 56761367767667887657999979921898710255766423431368966899888507842999947514999923
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~l~~~~L~~~~g~l~Gi~~~~sSl~~~~~~~~~~~~~s~~~~~~~~~v~~ls~~~lq~W~l~~~~e~~~~~~di~~ 240 (403)
T d1xksa_ 161 ESSGKIHQHILPQGQGMLSGIGRKVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTSSNISKWELDDSSEKHAYSWDINR 240 (403)
T ss_dssp CTTSCEEEEECTTCCCC------------------CCCCEEEEEEETTTTEEEEEESSEEEEEEECSSCEEEEEEEEHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHH
T ss_conf 78982899993588754555334542002124775434211133455314999977995478980389861567513789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~i~e~~~~~i~~~~~~~~~~~~~i~~~~LD~~~~~~g~~iL~~~~~~~~~~~~~yy~L~ti~~~~~~~~~~~~~~l~~~~ 320 (403)
T d1xksa_ 241 ALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYN 320 (403)
T ss_dssp HHHHHHHHHHHTTSTTHHHHHTTCEEEEEEEEEETTEEEEEEEEECTTSSSCBEEEEEEEECCBTTBCCSCEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf 99999998752023556565444305998875848976999999732668870799999998278713788999867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~~~rl~vp~p~~~~ayv~~~~~V~~~~~~~~~~~~~~d~I~F~~~~d~il~~~~~~~~pl~fs~~~Glv~it 400 (403)
T d1xksa_ 321 PPFQSEDLILCQLTVPNFSNQTAYLYNESAVYVCSTGTGKFSLPQEKIVFNAQGDSVLGAGACGGVPIIFSRNSGLVSIT 400 (403)
T ss_dssp CBCCCGGGCCCEEECCCSSSSEEEEECSSEEEEEECTTCTTCCCCEEEECCGGGCCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEE
T ss_conf 85674434760599658998389999099899995789989984417888454677885121578769999234189995
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
=
T Consensus 401 ~~~ 403 (403)
T d1xksa_ 401 SRE 403 (403)
T ss_dssp ECC
T ss_pred CCC
T ss_conf 799
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30419.53 Aligned_cols=1 Identities=100% Similarity=0.538 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~~~~g~~~i~~~f~w~~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk 80 (403)
T d1hx0a2 1 EYAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFR 80 (403)
T ss_dssp CCSCCCCTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHH
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH
T ss_conf 98998889972589700076899999999999981998799496815766788999876003687771489999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Lv~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T d1hx0a2 81 DMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDC 160 (403)
T ss_dssp HHHHHHHHTTCEEEEEECCSEEEETTCCCBSCBSSCCCBBGGGTBBTTTTBCGGGBCTTTCCSTTSBCCCTTCHHHHHHS
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 99999986699799997124466655321345666764543334577788887667887656788874655771002331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~~~pDLn~~np~Vr~~~~~~l~~~~~~GvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (403)
T d1hx0a2 161 QLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE 240 (403)
T ss_dssp BGGGEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECCCCCSSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 23445864679999999999999999873977653232321678899999999875073200156775278877516830
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~~ 320 (403)
T d1hx0a2 241 AIKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARL 320 (403)
T ss_dssp SSCGGGGTTTSEEECHHHHHHHHHHHTTCTTCCGGGGGGTTGGGTCCCGGGEEECSCCTTGGGTCSSCGGGCCCGGGHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 21022025887102243223245787641620478998750111368845057863467775556678864144456789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~a~af~lt~p~G~P~iy~gy~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~ 400 (403)
T d1hx0a2 321 YKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNV 400 (403)
T ss_dssp HHHHHHHHHHSCSSEEEEEECBCCCCCEETTEETTTTCCSSEETTEECCCCBCTTSCBCTTBCCGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987898164676306644544577667778999888874688747767778518777668999999998663
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
=
T Consensus 401 ~~g 403 (403)
T d1hx0a2 401 VDG 403 (403)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 679
|
| >d3b55a1 c.150.1.3 (A:40-442) Succinoglycan biosynthesis protein BC3120 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3120 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=30424.16 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~wi~~~a~pL~~~~p~~~~~Dl~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~va~E~d~~~~ 80 (403)
T d3b55a1 1 NQIAKWLEAHAKPLKTTNPTASLNDLKPLKNMVGSASIVGLGEATHGAHEVFTMKHRIVKYLVSEKGFTNLVLEEGWDRA 80 (403)
T ss_dssp HHHHHHHHHHCEEECCCCTTSCSGGGTTHHHHHTTCSEEEEEESCTTBHHHHHHHHHHHHHHHHHSCCCEEEEEEEHHHH
T ss_pred CHHHHHHHHHCEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf 95899999846718888999984779999987479739997267656079999999999999997699889994795889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~vn~yV~~g~g~~~~~~~~~w~~~e~~~li~WmR~yN~~~~~~~~v~f~G~D~~~~~~s~~~~v~~yl~~~~p~~~~~~ 160 (403)
T d3b55a1 81 LELDRYVLTGKGNPSQHLTPVFKTKEMLDLLDWIRQYNANPKHKSKVRVIGMDIQSVNENVYNNIIEYIKANNSKLLPRV 160 (403)
T ss_dssp HHHHHHHHHSCSCGGGTSCGGGCBHHHHHHHHHHHHHHHCTTCSCCCEEEEEECSCCCHHHHHHHHHHHHHHHGGGTHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 99988875488887787676435288999999999984458877842799854565205578999999986198889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 240 (403)
T d3b55a1 161 EEKIKGLIPVTKDMNTFESLTKEEKEKYVLDAKTISALLEENKSYLNGKSKEFAWIKQNARIIEQFTTMLATPPDKPADF 240 (403)
T ss_dssp HHHHHHHGGGSSSHHHHHTSCHHHHHHHHHHHHHHHHHHHHTGGGGTTTSHHHHHHHHHHHHHHHHHHHTTCCTTCTTHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99874123333465667764155578899999999999998476541274679999999999999999998456774667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~RD~~Maenl~wl~~~~~kiivwaHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~~~~~~~~ 320 (403)
T d3b55a1 241 YLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLSFIYPKVAGQHLAEYYGKRYVSIGTSVYEGQYNVKNSDGEFGP 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSEEEEEEHHHHSSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCC
T ss_conf 77899999999999870689889995705425677554557554889999884874499999734640512567788663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~v~~~~~~S~E~~l~~~~~~~~~ldlr~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~fDali~i~~~tP~ 400 (403)
T d3b55a1 321 YGTLKSDDPNSYNYIFGQVKKDQFFIDLRKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKAFDILVQIQKVSPS 400 (403)
T ss_dssp EEECCCCCTTSHHHHHHTSSCSEEEEEGGGCCHHHHHHHTSCEEEECCCSBCBTTBCSEEEECHHHHCSEEEEEEEECBC
T ss_pred EEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCC
T ss_conf 02227999988999997369986898764365331557630424045357898666754058859969589996565745
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
-
T Consensus 401 ~~~ 403 (403)
T d3b55a1 401 QVH 403 (403)
T ss_dssp CBC
T ss_pred CCC
T ss_conf 369
|
| >d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154c1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30420.48 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~lR~~GPv~~~~~~g~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (403)
T d1gwia_ 1 ARIPLDPFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLAN 80 (403)
T ss_dssp CCEECCTTCSCHHHHHHHHHHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888987669559999998149978988479960999679999999966976133765333222466765443200003
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~ll~~dG~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~a~~~~~~~~~~~~g~~~~~~ 160 (403)
T d1gwia_ 81 PGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARL 160 (403)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 68862158857899999997640443313222447989899875321035844431034433333233221047641000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ag~~tt 240 (403)
T d1gwia_ 161 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETT 240 (403)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 00022233222222048999999999987689999987427642222111112123320123358999999987064210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~~~l~~~p~~~~~l~~~~~~l~~~i~E~lRl~pp~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rd~~~ 320 (403)
T d1gwia_ 241 ISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA 320 (403)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCCCCCHHH
T ss_conf 11445555433421589999997620100001220221275200024344687670435654632353100245677654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~pdP~~F~PeR~~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~p~~~~~~~~~~~~~~~~~lpv~~~ 400 (403)
T d1gwia_ 321 HGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLA 400 (403)
T ss_dssp HCGGGGSCCTTCCCSSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESS
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 09955434878899998376688872680199999999999999999679788888834464688655579876479995
Q ss_pred --C
Q ss_conf --9
Q 003615 112 --C 112 (807)
Q Consensus 112 --C 112 (807)
-
T Consensus 401 ~~~ 403 (403)
T d1gwia_ 401 HHH 403 (403)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 079
|
| >d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=0 Score=30355.50 Aligned_cols=1 Identities=100% Similarity=3.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~sP~d~ry~~~~~~~ifs~~~~~~~~l~ve~a~a~a~~e~G~ip~~~a~~i~~~~~d~~~i~~~e~~~~hdv~a~~~~l 80 (402)
T d1dofa_ 1 HVSPFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRLERETGHDILSLVLLL 80 (402)
T ss_dssp CCCGGGTTSSCHHHHTTSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC--------CHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 92987656498899987294999999999999999999874989889999998723388999999988589804799998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~vH~G~TsnDi~~ta~~l~~r~~~~~l~~~l~~l~~~L~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~ 160 (402)
T d1dofa_ 81 EQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYY 160 (402)
T ss_dssp HHHHCCSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 65347888502676487661598999986466788899999999999987640211003765256554229988888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~r~~~rl~~~~~~~~~~~gGa~g~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~rd~~~e~~~~L~~~a~~L~kia 240 (402)
T d1dofa_ 161 ELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLA 240 (402)
T ss_dssp HHHHHHHHHHHHHHHCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCSSCSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999875034566552224430445789999887345555235555541001688999888898999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~Di~~~s~~e~ge~~e~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~ 320 (402)
T d1dofa_ 241 VEIRELSRPEIGEVVEGGGGSSAMPHKANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALD 320 (402)
T ss_dssp HHHHHHTSTTTCSEESCC---------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 99999717753541134675410258878428998724378887888999875124432120245655302532599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~l~~~~~~l~~l~vn~erm~~~l~~s~~~i~ae~~~~~L~~~gl~~~~Ah~~v~~~~~~a~e~~k~~~e~l~~d~~~l~ 400 (402)
T d1dofa_ 321 EILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLK 400 (402)
T ss_dssp HHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCC
T ss_conf 99999999876499989999999985158667999999999869999999999999999999958985999860825147
Q ss_pred -C
Q ss_conf -9
Q 003615 112 -C 112 (807)
Q Consensus 112 -C 112 (807)
|
T Consensus 401 l~ 402 (402)
T d1dofa_ 401 LC 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d2g5da1 b.52.1.4 (A:40-441) Membrane-bound lytic murein transglycosylase A, MLTA {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Neisseria gonorrhoeae [TaxId: 485]
Probab=100.00 E-value=0 Score=30349.51 Aligned_cols=1 Identities=0% Similarity=-1.192 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 p~~p~~~p~pa~~~~~~~~a~~~~vsf~~LpGW~~dd~~~al~af~~sC~~l~~~~~w~~~C~~a~~~~~~~~~aR~Ffe 80 (402)
T d2g5da1 1 PDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFE 80 (402)
T ss_dssp CCCCCCCCCCTTCEEEETTEEEEECCGGGSTTCTTCCHHHHHHHHHHHHHHHTTSTTCHHHHHHHHTSCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 98887899997654567764234546888889740139999999999877503246789999999717998099999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~F~p~~v~~~g~~~Gl~TGYYEP~l~gS~~r~~~y~~PlY~~P~DLv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
T d2g5da1 81 RYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGG 160 (402)
T ss_dssp HHEEEEEEEETTBSCEEEEEEEECEEEEESSCCSSCCEEEEBSCTTCEEEECC--------CEEECCCBTTBCC------
T ss_pred HHCEEEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 72789998407987525877403057653366888887734589532225555433322222222334455443334444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~dl~~~~~~~~~~~~~gR~~~~~~vPY~~R~eI~~g~l~~~~~elaW~~Dpvd~FFLqIQGSGrl~l~dG~~~rvgY 240 (402)
T d2g5da1 161 THTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGY 240 (402)
T ss_dssp -EEECTTTSCCCSCCSEEEEEEETTEEEECCCHHHHHTTTTTTSSCEEEEESCHHHHHHHHHHSCEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHEEECCCEEEEECCCCEEEEEE
T ss_conf 33354112563222101100102785134776999864875677745788378255352665263699937999899986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ag~NG~pY~sIGr~Li~~G~i~~~~~Smq~Ir~Wl~~nP~~~~ell~~NpsYVFFr~~~~~~~~GP~Ga~gvpLtp~rSi 320 (402)
T d2g5da1 241 ADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGGDGPVGALGTPLMGEYAG 320 (402)
T ss_dssp EEECCCCCCCHHHHHHTTTSSCTTSCSHHHHHHHHHHCGGGHHHHHTTCCCCEEEEEC-----CCCBCTTSSBCCTTSEE
T ss_pred CCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 36789965108999976698671128999999999979799999997499749988778888899864367756677046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 AvD~~~iPlG~pv~l~t~~p~~~~~~~rL~iAQDTGgAIkG~~R~D~f~G~G~~Ag~~AG~mk~~G~~~~LlPk~~~p~~ 400 (402)
T d2g5da1 321 AIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEY 400 (402)
T ss_dssp EECTTTSCTTCEEEEEEECTTTCSEEEEEEEEEEECTTCCSSSEEEEEEEESHHHHHHHHHCEEEEEEEEEEETTCCCCC
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 61776257887389974577778850027998515765348861698751888999887452575259999528888677
Q ss_pred -C
Q ss_conf -9
Q 003615 112 -C 112 (807)
Q Consensus 112 -C 112 (807)
=
T Consensus 401 ~~ 402 (402)
T d2g5da1 401 RP 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 97
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30348.54 Aligned_cols=1 Identities=0% Similarity=-1.989 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~gPL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~ 80 (402)
T d1xk7a1 1 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFL 80 (402)
T ss_dssp CCCCCCSTTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 98899969999888883780289999999998299599989999997434588516773899859998693978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Lv~~aDv~i~n~rpg~~~~lGl~~~~L~~~nP~lI~~sisgfG~~~~gp~~~~~~~D~~~qA~sG~~~~~G~~~~p~~~ 160 (402)
T d1xk7a1 81 KLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPA 160 (402)
T ss_dssp HHHTTCSEEEEECSSSHHHHTTCCHHHHHHHCTTCEEEEEESSCSSSCTTTTTSCCCHHHHHHHHTSGGGSEETTEECCC
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 98750587534101222113465421001002443213655565776765467777663212210000101455455433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~d~~~g~~aa~ailaAL~~r~~TG~Gq~VdvSm~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~y~~~D 240 (402)
T d1xk7a1 161 FPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCAD 240 (402)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCCCCBBTTBCSSBTTEEEEEETT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 44322123124431345777640345788665443432201344321111000123332222234677422458553146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 G~i~i~~~~~~~~~~l~~~~g~~~l~~dp~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~t~~e~~~~l~~~gvp~apV~ 320 (402)
T d1xk7a1 241 GYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVL 320 (402)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCGGGTTSSSSCTTCCCCBTTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCC
T ss_conf 76211233222222201121001222322233322221000366778899999999865021145566550795010478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~e~~~dpq~~~r~~~~~~~~~~~g~~~~p~~p~~fs~t~~~~~~~aP~lGeht~eIL~eLG~s~~eI~~L~~~gvi~~ 400 (402)
T d1xk7a1 321 TVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKV 400 (402)
T ss_dssp CGGGSTTCHHHHHHTCEEEEECTTSCEEEEECCSSCCSSSCCCCCCCCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSEEC
T ss_pred CHHHHHHCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEC
T ss_conf 99998779898971999988768997667305770158999887899999985499999986999999999998829868
Q ss_pred -C
Q ss_conf -9
Q 003615 112 -C 112 (807)
Q Consensus 112 -C 112 (807)
=
T Consensus 401 ~~ 402 (402)
T d1xk7a1 401 ED 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: N-acyl-D-glucosamine 2-epimerase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30347.47 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~l~~ilpfW~~~~~D~~~GGf~~~ld~dg~~~~~~k~~~~~~R~l~~fs~a~~~~~~~~~~~~ 80 (402)
T d1fp3a_ 1 MEKERETLQAWKERVGQELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPEL 80 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 94168999999999999999999878855807678972143789998579886365549999999999997463489899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~a~~g~~~L~~~~~~d~~~Gg~~~~vd~dG~~~~~~k~~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~i~~~~~~ 160 (402)
T d1fp3a_ 81 LDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVRE 160 (402)
T ss_dssp HHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999981883589998898878999967654564120899999899886039989999999999999998421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~g~~~~~~~~~~~~~g~~~~m~l~ea~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 240 (402)
T d1fp3a_ 161 DPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCL 240 (402)
T ss_dssp CGGGGCCCCCTTSCCEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 56888741247875434354179999999997343430579999999999998875016541257764314667666834
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~i~pGh~~e~~wLll~a~~~~~~~~~~~~a~~~~~~~~~~~g~d~~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i 320 (402)
T d1fp3a_ 241 GRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAM 320 (402)
T ss_dssp HHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 47278502359999999999873990479999999999999829557899588875378886655441377787899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~~~~~~~g~~~~~~k~~p~~~~YH~~ral~~~~~~l~~~~~~ 400 (402)
T d1fp3a_ 321 IAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKGGPFKGCFHVPRCLAMCEEMLSALLSR 400 (402)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSSCSSCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987049989999999999999986877999766743899989986677888898461899999999999999851
Q ss_pred -C
Q ss_conf -9
Q 003615 112 -C 112 (807)
Q Consensus 112 -C 112 (807)
.
T Consensus 401 ~~ 402 (402)
T d1fp3a_ 401 LA 402 (402)
T ss_dssp HC
T ss_pred CC
T ss_conf 39
|
| >d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-ERYF species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=0 Score=30345.86 Aligned_cols=1 Identities=0% Similarity=-0.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~f~~dpy~~y~~lr~~gPv~~~~~~g~~~~vvt~~e~v~~vl~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T d1z8oa1 1 TVPDLESDSFHVDWYRTYAELRETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDV 80 (402)
T ss_dssp CCCBTTSGGGTSSHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHH
T ss_pred CCCCCCCHHHHHCHHHHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98787974566594999999983499789850895389988999999996497534483112565544564223442667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~l~~~dg~~H~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 160 (402)
T d1z8oa1 81 RNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEK 160 (402)
T ss_dssp HHHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGG
T ss_pred HHHHCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77741562016577776420212210243205677888899999875203222223333212330344556666300377
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~aG 240 (402)
T d1z8oa1 161 YRGEFGRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAG 240 (402)
T ss_dssp GTTTHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf 88888888889875065112566788899999999988999728887779999985664288787789888888873064
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 320 (402)
T d1z8oa1 241 FEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD 320 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 54315678888888765058999975013445430155654220244332134567555784134543022334452168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 p~~f~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 400 (402)
T d1z8oa1 321 PKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 400 (402)
T ss_dssp TTTSSSTTSCCTTSCCTTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEE
T ss_conf 53278911228899999988989986578139999999999999999967977578887876352787668988557996
Q ss_pred -C
Q ss_conf -9
Q 003615 112 -C 112 (807)
Q Consensus 112 -C 112 (807)
-
T Consensus 401 ~~ 402 (402)
T d1z8oa1 401 DG 402 (402)
T ss_dssp TC
T ss_pred CC
T ss_conf 59
|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: RecA protein-like (ATPase-domain) domain: Extracellular secretion NTPase EpsE species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=30273.90 Aligned_cols=1 Identities=0% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~pi~~lv~~ll~~A~~~~ASDIHi~~~~~~~~V~~RidG~L~~~~~~~~~~~~~l~~~~ 80 (401)
T d1p9ra_ 1 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRV 80 (401)
T ss_dssp CHHHHHHC-------------CHHHHHHHHHHHHHHHHTCSEEEEEEETTEEEEEEEETTEEEEEECCCGGGHHHHHHHH
T ss_pred CHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHH
T ss_conf 95464312787344654257767999999999999982980599981788846999989998887888855699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~a~~~~~~~~~~q~g~~~~~~~~~~i~~Rv~~~p~~~g~~~vlRl~~~~~~~~~l~~LG~~~~~~~~l~~l~~~~~Gl 160 (401)
T d1p9ra_ 81 KVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 160 (401)
T ss_dssp HHHTTCCTTCCSSCEEEEEEC-----CEEEEEEEECCTTSCEEEECCEETTTTCCCGGGSCCCHHHHHHHHHHHTSSSEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCE
T ss_conf 98513678887530120022313894488754442202344566543112332001443013577789999998641054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 iLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~~ 240 (401)
T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 240 (401)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHH
T ss_conf 89876787774477999866625787469996267434567887026558767799999999984138889845768759
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ta~~a~~aa~tGhlV~tTlHa~~a~~~~~Rl~~~~~~~~~l~~~l~~vv~QrLv~~lCp~Ck~~~~~~~~~~~~~~~~~~ 320 (401)
T d1p9ra_ 241 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKK 320 (401)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHTCCHHHHHHHEEEEEEEEEEEEECTTTCEEEECCHHHHTTC-----
T ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 99999999724985899833676676654321002445667777898874205342188867688999999962354545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~~GC~~C~~~Gy~GR~~v~Evl~~d~~l~~~I~~~~~~~~l~~~~~~g~~tl~~~a~~~v~~G~~s~eEv~R~ 400 (401)
T d1p9ra_ 321 EPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRG 400 (401)
T ss_dssp CCCEEEECCCCSSSCSSSEEEEEEEEEEEECCHHHHHHHHTTCCHHHHHHHHHTTCCCHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 66379808996303799888732999998189999999984998999999998099029999999998599989998243
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
-
T Consensus 401 ~ 401 (401)
T d1p9ra_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 2-amino-3-ketobutyrate CoA ligase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30271.95 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~m~~~~~~~~~~~l~~~~~~g~~r~~~~i~~~~g~~v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 1 GSHMRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96044899999999999999759987513304788884893499889998765402546899999999999998198865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~sr~~~g~~~~~~~lE~~lA~~~g~e~al~~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d 160 (401)
T d1fc4a_ 81 SVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND 160 (401)
T ss_dssp SCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCC
T ss_conf 42131257088999999888761677447734445666789997457886899677643888705122575079975788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~di 240 (401)
T d1fc4a_ 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDI 240 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHCCCCCCCEE
T ss_conf 47899999985514567159997577789895565057898875428189800210145145799850101268888729
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g 320 (401)
T d1fc4a_ 241 ITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp EEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99651430156776111378789999871792665067888788998875431234689999999987899986401358
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~~~~pIv~v~~~~~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg~i 400 (401)
T d1fc4a_ 321 FTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVI 400 (401)
T ss_dssp CCBCCSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76379999879999799999999999999789059758899789998439999787799999999999999999984888
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
-
T Consensus 401 ~ 401 (401)
T d1fc4a_ 401 A 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30270.85 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 97999889872689999999999998799899996830677898769748977850654541035200799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1iira_ 81 ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQ 160 (401)
T ss_dssp HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
T ss_conf 99999999976147642774124257888988887535422344565445532356412466542100001135566566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d1iira_ 161 SAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPPP 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSSCCEECCCCCCCCCCCCCHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 77877778888999984476410233210231023235644467777654332236755676555677888763148975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~V~hgG~~t~~Eal~~ 320 (401)
T d1iira_ 241 VYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGTTHVAARA 320 (401)
T ss_dssp EEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHH
T ss_conf 99715754665689999999999769807984267764233578978997025879999545899963771699999981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~a~~~~~~~~~~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 321 GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (401)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 99999806614179999999987988876847899999999999996979999999999998750839999999999846
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 ~ 401 (401)
T d1iira_ 401 E 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450epok species: Sorangium cellulosum [TaxId: 56]
Probab=100.00 E-value=0 Score=30270.40 Aligned_cols=1 Identities=0% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~p~~~~dP~~~~~~lr~~gPv~~~~~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (401)
T d1q5da_ 1 DFKPFAPGYAEDPFPAIERLREATPIFYWDEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGL 80 (401)
T ss_dssp CCCTTSTTTTTCCHHHHHHHHHHCSEEEETTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHST
T ss_pred CCCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 97989867885949999999846998997999989983999999996598735475433454444655510233013651
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~dg~~h~~~Rk~l~~~fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1q5da_ 81 FGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRF 160 (401)
T ss_dssp TTSCHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 46888889876320421134213566788889888888876531011111578776543101100001100237888888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~i~~~~~~~l~ag 240 (401)
T d1q5da_ 161 GSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAG 240 (401)
T ss_dssp HHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999875112222101677888899999999999877754125644327889876304565207889999999987046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~etta~~l~~~l~~L~~~p~~~e~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~d~~~~g~~ip~G~~v~~~~~~~~r 320 (401)
T d1q5da_ 241 TDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALR 320 (401)
T ss_dssp SHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 32024677778999975299999864465323343210000011134433323345620257666764067421002478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 dp~~f~dP~~F~PeR~~~~~lpFg~G~r~C~G~~lA~~e~~~~la~ll~rf~~~~l~~~~~~~~~~~~r~~~~l~v~~~p 400 (401)
T d1q5da_ 321 DGTVFSRPDVFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKP 400 (401)
T ss_dssp CTTTSSSTTSCCTTSCCTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEECCCSSBCCEEECEEESSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCEEEEEC
T ss_conf 82227995434889999999998997558822999999999999999996799848899840678765686645399961
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
-
T Consensus 401 ~ 401 (401)
T d1q5da_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30269.97 Aligned_cols=1 Identities=0% Similarity=0.437 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~h~~~~~~~G~vy~wG~n~~GqLG~g~~~~~~~~P~~v~~~~~i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG 80 (401)
T d1a12a_ 1 KKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALG 80 (401)
T ss_dssp CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTC
T ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf 93106678999789889999699988889999886503577908999929999189889999679989999589998877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g 160 (401)
T d1a12a_ 81 RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 160 (401)
T ss_dssp SCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 44655664235542354220022011100101000345311202145655544666775431001100168850699820
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~l~~~g~ 240 (401)
T d1a12a_ 161 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 240 (401)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEECCCE
T ss_conf 35225650378500346687662288875344567755544335652000035677778439999936876999955981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~ 320 (401)
T d1a12a_ 241 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL 320 (401)
T ss_dssp EEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEE
T ss_pred EEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 86512221020354566310000010123554036999851012013561489788840334675678862333558888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 i~~~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~~v~~v~~G~~hs~~l~~d~~~ 400 (401)
T d1a12a_ 321 ISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 400 (401)
T ss_dssp CCSSSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEEEEEEECSSEEEEEEEECSC
T ss_pred CCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCCCCEEEEEEECCCEEEEEEECCCC
T ss_conf 57999829999308879999489969999259988778999988860789643578998899999752439999979966
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
-
T Consensus 401 ~ 401 (401)
T d1a12a_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30269.80 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 94999889875689999999999998799899997834677898779748976870776421566543378999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1rrva_ 81 VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAA 160 (401)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999844898599982842668999999827974000000000102556423465556532001246788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~v 240 (401)
T d1rrva_ 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPV 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCCHHHHHHHHSSSCCE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 77765478999999983785331255430354211011133203577788689788866655459989997522479839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~I~hgG~~t~~Eal~ 320 (401)
T d1rrva_ 241 HIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATR 320 (401)
T ss_dssp EECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEECCCCHHHHHHHH
T ss_conf 99878644578899999999998626974899505443455457898899731481777621248886177248999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 321 AGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp HTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 39998980661208999999998798897574789999999999998497999999999998755179999999999857
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 r 401 (401)
T d1rrva_ 401 R 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 6
|
| >d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Terpenoid cyclases/Protein prenyltransferases family: Protein prenyltransferases domain: Protein farnesyltransferase, beta-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30270.21 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~t~ts~~q~~~e~~~~~~~~~~~~~~~~~~~~L~r~~H~~y~~~~L~~lp~~~~~lD~~r 80 (401)
T d2h6fb1 1 EPLYSLRPEHARERLQDDSVETVTSIEQAKVEEKIQEVFSSYKFNHLVPRLVLQREKHFHYLKRGLRQLTDAYECLDASR 80 (401)
T ss_dssp CCCGGGSGGGGGGSCCCTTCCCHHHHHHHHHHHHHHHHHHTTCBTTBCCCCCCCHHHHHHHHHHHTTEECGGGGGGTTCH
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC
T ss_conf 97345467664331468898637889999999999999987534037865532599999999999986988760625462
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~l~yw~l~~L~LL~~~~~~~~~~~ii~~l~~~q~~~GGF~g~pg~~~hla~Ty~Al~~L~ilg~~~~~~~idR~~i~~f 160 (401)
T d2h6fb1 81 PWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQY 160 (401)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHBCTTSSBBSSTTCCBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999985998538999999999999718999968999987433999999999997177521023339999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 L~slQ~pDGsF~~~~~ge~D~R~~Y~Av~i~~lL~~~~~~~~~~~~~~I~scQ~~dGGfg~~pg~EaHgg~TfCalAaL~ 240 (401)
T d2h6fb1 161 LYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALV 240 (401)
T ss_dssp HHTTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCCCTTTTTTHHHHHHHHBCTTSSBCSSTTSCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99951888980002367766212699999999958997778999999999806888874578788763539899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lL~~~~~~d~~~l~~WL~~RQ~~~eGGF~GR~nKlvD~CYSfW~ga~l~lL~~~~~~~~~~~~~~~~~l~d~~~l~~yiL 320 (401)
T d2h6fb1 241 ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYIL 320 (401)
T ss_dssp HHTCGGGSCHHHHHHHHHHTBCTTTCSBBSSTTSCBCTTHHHHTTTHHHHHHHHHHHTTCTTCCSSCCSSCHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 84788645899999999973778778437887887635788899889999999861246631113333437999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~Q~~~GGf~d~Pg~~pD~yHT~y~L~gLSl~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~i~~~~~~~~~~~f~~~p~ 400 (401)
T d2h6fb1 321 MCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPV 400 (401)
T ss_dssp HHSBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHHEEEETTEEEECCCSSGGGCCCCCCTTTSSCHHHHHHHHHHHHTSCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 97478999948897899870088899999986577676676643235775346633798615889999999999985899
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 ~ 401 (401)
T d2h6fb1 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 9
|
| >d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Hormone binding domain of the atrial natriuretic peptide receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30268.56 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~a~~~~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~iN~~g~~~~~~~~g~~i~~~~~D~~~~~~~~~~~~~~l~~~~~ 80 (401)
T d1jdpa_ 1 EALPPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG 80 (401)
T ss_dssp CCCCCCEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEECTTSTHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99899722899997799940221678999999999999866786556789948999998289997999999999997366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~v~~iiG~~~s~~~~a~~~~~~~~~ip~is~~~~~~~~~~~~~~~~~~fr~~~~~~~~~~al~~~l~~~~~~~v~il~~ 160 (401)
T d1jdpa_ 81 AKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYS 160 (401)
T ss_dssp CCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCSGGGGCTTTTTTTEEECSCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 88089999987503678878888619854631445542122345677279831546889999999877517737999995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~i~~~~~~~g~~~~~~~ 240 (401)
T d1jdpa_ 161 DDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYA 240 (401)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHTCEEEEEEECTTSCCCHHHHHHHHHHHCSEEEEESCHHHHHHHHHHHHHTTCTTTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 68652057899998888736534899740245676268999998632574069999346889999999998188888769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~a~~~yDav 320 (401)
T d1jdpa_ 241 FFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAI 320 (401)
T ss_dssp EEEECSSCCCSTTTCTTCCSSTTHHHHHHHGGGEEEEEECCCCCHHHHHHHHHHHHHHHTTTCCCCSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 99633114643347301025542367888865414212458898689999999999984067776666207889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~l~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~~Gdr~~~~~~~~~~~~~~g~~~~Vg~~~~~~~~~~~~ 400 (401)
T d1jdpa_ 321 LLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMR 400 (401)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHSSEEEEETTEEEEECTTSBBCCEEEEEEEEETTTTEEEEEEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEE
T ss_conf 99999999998568999889999999867917717668998999882576799999997898799999998997669974
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 ~ 401 (401)
T d1jdpa_ 401 P 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]
Probab=100.00 E-value=0 Score=30267.85 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 80 (401)
T d7aata_ 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 97010689799986999999983778999588617877688899898789999999996289888889977789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T d7aata_ 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 99984247865576753885462578899999876674358985599816777640258998599689985424446665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d7aata_ 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 37888888722777618999647889855458999999999987356379998636144314886553356666532201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T d7aata_ 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 13406751330005515531021261888889888888888764033563057888998841787889999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v~ 400 (401)
T d7aata_ 321 RIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999857988863577997589953979999999998299998897179852699888999999999974
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 k 401 (401)
T d7aata_ 401 K 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2r7da2 b.40.4.16 (A:3-403) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Ribonuclease II family protein DR0020 species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=30267.34 Aligned_cols=1 Identities=0% Similarity=-0.461 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~p~~~~~~~v~ve~~~~~~~~~~~i~~~lg~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 80 (401)
T d2r7da2 1 QPELTPAQRTEVELLARGRADKSRVLRDLKLPETPEAAHALLLRLGVWDEARTPYADRLRAALNAVELPVPDFDPAEERL 80 (401)
T ss_dssp CCCCCHHHHHHHHHHHTTSCSCCHHHHHTTCCCSHHHHHHHHHHHTSSCTTCCCHHHHTTCCCSCCCCCCCCCCTTSCCE
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99899888899998123899973124522999996569999998199865566780999999863267888743334661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Dlr~l~~~tID~~~a~D~DDAisie~~~~g~~~l~VHIADVs~~v~~~s~Ld~eA~~R~tSvYlp~~~~pMLP~~ls~~~ 160 (401)
T d2r7da2 81 DLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVAKA 160 (401)
T ss_dssp ECTTSCEEEEECTTCCCCCEEEEEEECSTTCEEEEEEEECGGGTCCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHHHH
T ss_pred CCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCC
T ss_conf 52028679988998864421036787479968999961356662067776899999858464089972423758874132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 SL~~~~~r~als~~~~ld~~g~i~~~~~~~s~I~~~~ltY~~v~~~~~~~~~~l~~l~~~~~~l~~~R~~~gal~~~~~~ 240 (401)
T d2r7da2 161 GLGLHEVSPALSICLDLDPDGNAEAVDVLLTRVKVQRLAYQEAQARLEAGEEPFVTLARLARASRRLREGEGALSIDLPE 240 (401)
T ss_dssp STTSSSSEEEEEEEEEECTTSCEEEEEEEEEEECEEEEEHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 24567566541147887267872332488878998301277899886314136788888999999999866884335654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~d~~~~~~~~~~~~~s~~lVeE~MilAN~~~A~~l~~~~~p~iyR~~~~p~~~~~~~~l~~~~~~~~~~~~a~ys~ 320 (401)
T d2r7da2 241 VRVKADETGASVFPLPKPEMRTVVQECMTLAGWGTAIFADDNEIPLPFATQDYPTREVAGDTLPAMWARRKTLARTRFQP 320 (401)
T ss_dssp EEEEEETTEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCSSCCCCCSHHHHHHHHHHCCCEEEES
T ss_pred CEEEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCEEEECC
T ss_conf 20221367751002541312456676765301548999864368753103678824432110788887640044006758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~H~gLgl~~YthfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~l~~~~~~~~~~~~~~~~~er~~~~~~~~~yl~~~ 400 (401)
T d2r7da2 321 SPGPHHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAGRDPLSSKVMAAHIAESQMNADATRQAERLSRRHHTLRFIAAQ 400 (401)
T ss_dssp SCCCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98867110678606269725405789999999999769999999999999999999999999999999999999999859
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
=
T Consensus 401 p 401 (401)
T d2r7da2 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 2
|
| >d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154a1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30268.96 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~dp~~~d~~~~~~~lr~~Gpv~~~~~~g~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1odoa_ 1 ALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVEN 80 (401)
T ss_dssp CEECCTTCTTHHHHHHHHHTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCS
T ss_pred CEECCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 94358899981999999996399899964991199988999999996397724366666532223455541123304787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~~~g~~h~~~R~~l~~~fs~~~v~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~ 160 (401)
T d1odoa_ 81 MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDG 160 (401)
T ss_dssp GGGCCHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 62388599999999877651721477777788999999976422013332222321000000011221235653112123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~l~~~g~~t 240 (401)
T d1odoa_ 161 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYET 240 (401)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 44455554310102578899999999999987664136776642232112333334689799999999999998656521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~e~~R~~p~~~~~~~~~~~~d~~~~~G~~ip~Gt~v~~~~~~~hrd~ 320 (401)
T d1odoa_ 241 TVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHP 320 (401)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHCCC
T ss_conf 02355543201343214431001233311000001111112455333322346525229779617952324488870772
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 321 ~~~~dp~~F~PeR~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~ 400 (401)
T d1odoa_ 321 DWHEDADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLH 400 (401)
T ss_dssp TTSTTTTSCCTTCSCCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 22896543287878999987789884783599999999999999999779868899877771467875579874059983
Q ss_pred C
Q ss_conf 9
Q 003615 112 C 112 (807)
Q Consensus 112 C 112 (807)
-
T Consensus 401 ~ 401 (401)
T d1odoa_ 401 A 401 (401)
T ss_dssp -
T ss_pred C
T ss_conf 9
|
| >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: G proteins domain: Interferon-inducible GTPase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=30194.65 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~dl~ss~~~~~~~~~~~~~~l~~e~~~~i~~~~~~~~~~~~~~~i~~~l~~~~~~~l~Iai~G~~n~GKSSLiNaL~G~~ 80 (400)
T d1tq4a_ 1 NDLPSSFTGYFKKFNTGRKIISQEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIG 80 (400)
T ss_dssp CCHHHHHHHHHTTSCGGGCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCEEEEEEECTTSSHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 96178899999877654004409899999998861777989999999997443677179998999997899999995888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~g~~~tT~~~~~~~~~~~~~~~l~DtPG~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~d~~l~~~l~~ 160 (400)
T d1tq4a_ 81 NEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM 160 (400)
T ss_dssp TTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 67775678999887044553110689707998379854333449999987433226599996588887889999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~k~~~~V~nK~D~~~~~~~~~~~~~~~~e~~l~~ir~~~~~~l~~~~~~~~~vflvS~~~~~~~d~~~L~~~l~~~L~~ 240 (400)
T d1tq4a_ 161 MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPI 240 (400)
T ss_dssp TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHSCG
T ss_pred CCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69987999708632101354322011227889999999999999874899897797337764515899999999998399
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~l~~~~~~~i~~K~~~~~~~i~~~a~~a~~~~~iP~p~~~~~~d~~~l~~~l~~y~~~fGlD~~sL~~lA~~ 320 (400)
T d1tq4a_ 241 YKRHNFMVSLPNITDSVIEKKRQFLKQRIWLEGFAADLVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLARD 320 (400)
T ss_dssp GGHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHTCCBSSCTTSSCCCHHHHHHHHHHHHHHHHHTTCSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999998516657999999899999999999999734246886303201329999999999999809998999999999
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~lka~iks~~~~~~~~~~~i~~~l~k~~~~~~~~~G~~~a~~~~f~~~~~l~~~~l~~~aedak~~l~~~~~~n 400 (400)
T d1tq4a_ 321 WEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLPKNSFLKEIFYLKYYFLDMVTEDAKTLLKEICLRN 400 (400)
T ss_dssp SSSCHHHHHHTCSHHHHTSSCCHHHHHHHHHHHHHHHHHHHCCSSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 29989999999708366555567899999999887883052389999999999999999999999999999999986559
|
| >d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate transeliminase domain: Pectate transeliminase species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=0 Score=30193.23 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GDtI~v~~GtY~~~~~~~~~~~~~~~~~G~~~~ 80 (400)
T d1ru4a_ 1 ADCSSDLTSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGA 80 (400)
T ss_dssp CCCTTCTTTTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTB
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCEEECCCEEEEEECCCCCCC
T ss_conf 97532000564447769997998679998722447889999983899599998695516651205753899723777897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~i~i~~~~~~~~vi~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~n~~i~~~~~~g~~~~~~~ 160 (400)
T d1ru4a_ 81 PIYVAAANCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGG 160 (400)
T ss_dssp CEEEEEGGGCCEEEECCCCTTCCCTTCCSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSSCSEEECTTC
T ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCEEEEECCC
T ss_conf 29996079972599587623343323431787447479944342067111222023421024526852775117885555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~G~~~~~~~~~~~i~nn~~~~n~~~~~~~~~~ 240 (400)
T d1ru4a_ 161 SYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF 240 (400)
T ss_dssp CSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTC
T ss_pred CCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCEEEECEEEECCCCCCCCCCCC
T ss_conf 42179974677134565442222024689612566166433566426766368824898799775998654101456430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~n~~~~n~~~g~~~~~~~~~~~i~nN~~~~n~~~~~~~~~~~~~~~~~~~nN~~~~~~~ 320 (400)
T d1ru4a_ 241 AGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASV 320 (400)
T ss_dssp CCCCCSEECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEESSSEEEEECSCCCTTCCEEEESCEEESSCE
T ss_pred CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCE
T ss_conf 01373365047776665589877886366553040357664112265687255430343223567650798328834740
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~Spai~aG~~~~~~~~~G~~pDiGAyE~~ 400 (400)
T d1ru4a_ 321 TVSNADAKSNSWDTGPAASASDFVSLDTSLATVSRDNDGTLPETSLFRLSANSKLINAGTKESNISYSGSAPDLGAFERN 400 (400)
T ss_dssp EECSEEEESSTTTTSCCCCGGGBSBCCGGGGGCCCCTTCCCCCCSBTCBCTTCTTTTCSCCCTTCCCSTTSCCSSSCCCC
T ss_pred EEECCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34134323522546730147761674643244656777767768884378998100487877788989986776777588
|
| >d3ovwa_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Fusarium oxysporum [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Fusarium oxysporum [TaxId: 5507]
Probab=100.00 E-value=0 Score=30192.55 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 q~~~~t~E~HP~ltwq~CT~~ggCt~~~g~vV~D~nwrw~h~~~g~~~c~~gn~w~~~lCpd~~tCa~nC~ldGad~~~y 80 (400)
T d3ovwa_ 1 ETPDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQKNGAGCGDWGQKPNATACPDEASCAKNCILSGMDSNAY 80 (400)
T ss_dssp CEECSSCCCCCEEEEEEEETTTEEEEEEEEEEECHHHHCEECTTSCBSCCTTSCCCTTTCSSHHHHHHHCEECCCCHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887676588523265058998586233499824733244058973234388565344887566676435237664555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~GVttsG~sLtl~~vt~~~~vGsRvYLl~~d~~~Yqmf~Llg~EfTFdVD~S~lpCGlNgALYfveM~adGg~s~~~~ 160 (400)
T d3ovwa_ 81 KNAGITTSGNKLRLQQLINNQLVSPRVYLLEENKKKYEMLHLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRN 160 (400)
T ss_dssp HHTTEEEETTEEEEESEETTEECCCEEEEECTTSSSBCEECCTTCEEEEEEECTTCCTTEEEEEEEECCCTTTTGGGCTT
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 40569953881899857548832621899757877357899338678888633568764322565662167778666788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 n~aGAkYGtGYCDAQC~d~kfInG~aNv~g~GsCC~EmDIwEANs~a~a~TpH~C~~~g~~~C~g~~Cg~~g~CD~~GC~ 240 (400)
T d3ovwa_ 161 SKAGAYYGAGYCDAQCYVTPFINGVGNIKGQGVCCNELDIWEANSRATHIAPHPCSKPGLYGCTGDECGSSGICDKAGCG 240 (400)
T ss_dssp CCCTGGGTCCCCBTTCCBCSEETTEECTTCCEEECCEEEEEEECSSCEEEEEECBSSCSCEEECGGGGSTTSSBCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 76666367722113156243205621346655555641101110455320688656787336457767888860888867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 fNpYR~g~~~FyG~G~~~tVDT~k~fTVVTQF~~~~~G~L~eIrR~YVQ~GkvI~n~~~~~~g~~~~~sit~~fC~~~~~ 320 (400)
T d3ovwa_ 241 WNHNRINVTDFYGRGKQYKVDSTRKFTVTSQFVANKQGDLIELHRHYIQDNKVIESAVVNISGPPKINFINDKYCAATGA 320 (400)
T ss_dssp BCGGGGTCTTSEESSTTSSEETTSCEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCCCSSSSCSCSSBCHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 67433488754878987142379973899788708985368998999609999668875677887677346677546786
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~f~~~GGl~~mg~al~rGmVLv~SlWdd~~~~M~WLDsg~~GpC~~tsg~p~~ve~~~p~a~Vt~SNIKfG~I~STy~~ 400 (400)
T d3ovwa_ 321 NEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQGVAGPCDATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTSSV 400 (400)
T ss_dssp HHHHHTTHHHHHHHHHHHCEEEEEEEEECTTTTTHHHHBTTSCSBCSSTTSHHHHHHHCSSCEEEEEEEEEESTTCSCCC
T ss_pred CHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCCCC
T ss_conf 42443476889888850886999986847999866204898878888888855651328997799860768577763119
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Probab=100.00 E-value=0 Score=30190.97 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~l~~~l~~aekAa~iar~~~~~~~l~~~~v~ek~~~~~~~k~~~D~VT~AD~~aq~~I~~~L~~~fP~~~~~IvGEE 80 (400)
T d1inpa_ 1 MSDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEE 80 (400)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 96899999999999999999998501687767643136534626799984189999999999999987869999988158
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~IDPIDGT~~ 160 (400)
T d1inpa_ 81 SNELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQ 160 (400)
T ss_dssp CSEEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHH
T ss_pred CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 88654544311122024136666666543114542023342023231100011001232356787656299952758420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Fi~G~~~~~v~iaL~~~~~~~v~vlI~lal~~~G~Pv~GvI~~P~~~~~~~~~~~~G~~~~a~~g~Ga~~~~~~~~~~~~ 240 (400)
T d1inpa_ 161 YIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTR 240 (400)
T ss_dssp HHHCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSST
T ss_pred HCCCCCCCEEEEEHHCCCCCCCEEEEEEHHEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 12699643255500126665313565201007897898475455446400023678428997437673236766665544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~g~a~~k~~~VA~G~~D~yl~~~~~~~~WD~aA 320 (400)
T d1inpa_ 241 SNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCA 320 (400)
T ss_dssp TTSSCSSCCCCBTTBTTSSSSCCEEEECTTCCSCCCCTTTTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCBHHHHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
T ss_conf 44322201025675333454047850345389999999747954997558899999996899888995578998788799
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 g~~Il~eaGG~VtD~~G~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~N~~giIA~~~~~~h~~~l~~l~~~l~~~~~~~ 400 (400)
T d1inpa_ 321 AHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQHLAPVATHT 400 (400)
T ss_dssp HHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTTCCCCSCCC
T ss_pred HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999978997987999962466544445210014443223553101556878997888999999999997633546789
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=30188.90 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~y~~~~d~v~~~l~~~~~~~~~~~~~~~~~G~~I~TTlD~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~I 80 (400)
T d2olua2 1 TNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGL 80 (400)
T ss_dssp CCCSGGGHHHHHHHHHHHTTSTTTTTSCHHHHTTBCCEEEECCCHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
T ss_conf 99877557999999999986128766567786679988995889999999999998534214867528999998899959
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lAm~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aaale~g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~G~v~l~~Al~ 160 (400)
T d2olua2 81 VAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALR 160 (400)
T ss_dssp EEEECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHHHHHHTCCCTTBEEECCSSEEETTEEECCTTSCCCCEEEHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997888883233321000003666556178899986458721110013334421111013366655553334322355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~S~N~~~v~l~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~lg~g~~~vtplqlA~aya~iANgG~~~~P~~v~~i~~ 240 (400)
T d2olua2 161 QSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVT 240 (400)
T ss_dssp TTCHHHHHHHHHHHHHHTCTTHHHHHHHHTTCCCSSCCCHHHHTTCTTCEECHHHHHHHHHHHHTTSEEECCBCEEEEEC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCC
T ss_conf 66511123200010024567889999987088731121100000123456778886400100005964787674011356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~g~~v~~~~~~~~v~s~~~a~~l~~~l~~vv~~~Gt~~~~~~~g~~vagKTGTa~~~~~~~~~~~~~~~~~~daWFvG~ 320 (400)
T d2olua2 241 RDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGF 320 (400)
T ss_dssp TTSCEEECCCCEEECSCHHHHHHHHHHHHGGGSTTSTTTTCCCSSCCCEEEEEEECCCHHHHHHTTCCTTEESEEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 43232222222222113789999976521433541000111357814777611144576576544566687640799983
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~P~~~~~VwvG~d~~~~~~~~~~~~~~~~~~~a~i~~~~m~~~~~~~~~~f~~P~~v~~~~p~~~~~~~~~~~~~~~~~~ 400 (400)
T d2olua2 321 TPQYTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQDNNTTNRSTH 400 (400)
T ss_dssp CSSEEEEEEEEESSCCGGGTTSEESHHHHTHHHHHHHHHHHHHSCCSCCCCCCCTTEESCTTCCEETTCCCSSBCCCCCC
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 69969999984688875676765676433579999999999975689666999998766777554789999998888889
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=100.00 E-value=0 Score=30189.00 Aligned_cols=1 Identities=0% Similarity=-1.125 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dl 80 (400)
T d1eh9a3 1 FNNETFLKKEDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGF 80 (400)
T ss_dssp CCSCCSCCSSSCCEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHH
T ss_pred CCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99877688768599998312307899999999875899975998899687676889999997877778858221999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 k~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR 160 (400)
T d1eh9a3 81 RKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFR 160 (400)
T ss_dssp HHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999997637713542244642577850443100211234545564435565556079999999999887524663688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (400)
T d1eh9a3 161 LDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFG 240 (400)
T ss_dssp ETTGGGCCCCSSSCHHHHHHHHHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHHHSCCCSGGGGGCC
T ss_pred EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHH
T ss_conf 60434415114565589999987533222110100468442564553352000212665310467665033210145444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~a~a~~l~~pGi 320 (400)
T d1eh9a3 241 NLDDIVKSYKDVFVYDGKYSNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYI 320 (400)
T ss_dssp SHHHHHHHHHSSCSCSSEEETTTTEEECCCCCSCCGGGEECCSCCHHHHHTTTTCCCGGGGSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 35789987543211221478999874465233304400443122046553356401267776656778999999848997
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 P~iy~G~E~G~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~lRk~~pv~ 400 (400)
T d1eh9a3 321 PMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKILIKMRKELSIA 400 (400)
T ss_dssp CEEESSGGGTCCCCCCCCCCCCSTTHHHHHHHHHHHHTCCCSCTTSHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHTCS
T ss_pred CEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 78977853288898875010266877666676405766789876552346556677657899999999999999678699
|
| >d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Old yellow enzyme (OYE) species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
Probab=100.00 E-value=0 Score=30115.96 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~p~~~~~~~LFsP~~Ig~~~lkNRiv~apm~~~~a~~~G~~~~~d~~i~yy~~rA~GG~GlIi~e~~~V~~~g~ 80 (399)
T d1oyaa_ 1 SFVKDFKPQALGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAG 80 (399)
T ss_dssp CBCTTCCCCCCTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCC
T ss_conf 97455888889999999973289988637668777667757899897987999999999972890799964377776547
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~l~~d~~i~~~k~l~~~vh~~Ga~i~~QL~H~Gr~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~p~~ 160 (399)
T d1oyaa_ 81 GYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHS 160 (399)
T ss_dssp CCTTSCBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCEEESCSSCCSCHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 78998745787998888699999975201221233220234574211334445667543566777777666567887520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 mt~~eI~~ii~~f~~AA~rA~~AGfDgVEIH~aHGYLl~qFLSp~tN~RtDeYGGSlENR~Rf~~Eii~aIR~~vg~~~I 240 (399)
T d1oyaa_ 161 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKV 240 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC
T ss_conf 15677888888999999999980975676124377789986413035665224765665457799998754340222574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 gvRls~~d~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~PV 320 (399)
T d1oyaa_ 241 GLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPV 320 (399)
T ss_dssp EEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSCTTSCTTSSCCCSCCTTHHHHHCCSCE
T ss_pred EEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 47853022025667741000577899999889874324543441122146677755454432111268999999829988
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 i~~G~i~~~~~~~~~i~~~~aDlV~~gR~liaDP~l~~K~~~G~~ln~~d~~~~~~~~~~gyt~~p~~~~~~~~~~~~~ 399 (399)
T d1oyaa_ 321 IRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMSAHGYIDYPTYEEALKLGWDKK 399 (399)
T ss_dssp EEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSSSTTTTCCCCHHHHHHTTSSCC
T ss_pred EEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 9978989869999999759981848879999791299999729998999653267899988084845499997489999
|
| >d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-NOR, nitric reductase species: Fungus (Fusarium oxysporum) [TaxId: 5507]
Probab=100.00 E-value=0 Score=30115.39 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~p~~~~~~~dP~~~~~~Lr~~gPv~~~~~~~g~~~~vvt~~~dv~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1jfba_ 1 APSFPFSRASGPEPPAEFAKLRATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKP 80 (399)
T ss_dssp CCBSSCCCSSTTSCCTHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899898766596899999996399688763789569997699999999769763547654567654544211012477
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 160 (399)
T d1jfba_ 81 TFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFNDL 160 (399)
T ss_dssp CGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 32226869999987400764566532111026789899887454321244431024566655667788887651000036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~~~~~~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt 240 (399)
T d1jfba_ 161 EYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATM 240 (399)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 78888766531000027899999999999999999998630245544322222223577762112212334322002015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~~~L~~~pe~~~~L~~e~~~~~~~~~e~lr~~~~~~~~~~R~~~~~~~~~g~~ip~G~~V~~~~~~~~~dp~~ 320 (399)
T d1jfba_ 241 VNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEV 320 (399)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
T ss_conf 66999999998456589999741345321101101232223433333222013334577676653211114451578422
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~dP~~F~PeR~~~~~~~lpFG~G~r~C~G~~lA~~el~~~l~~Ll~rfp~~~l~~~~~~~~~~~~~~~~g~~~lpv~~ 399 (399)
T d1jfba_ 321 FENPDEFNMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF 399 (399)
T ss_dssp SSSTTSCCTTCCCCSSCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCCEEEC
T ss_conf 7996445868889999886889997368069999999999999999967967899887776467787777871351039
|
| >d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp158a2 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30114.83 Aligned_cols=1 Identities=0% Similarity=0.736 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~p~~~~~~~~~~~~~~~~p~~~~lr~~gPv~~~~~~~g~~~~wvvt~~e~v~~vl~d~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1s1fa_ 1 QAVPPVRDWPAVDLPGSDFDPVLTELMREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFI 80 (399)
T ss_dssp CCSCCEEECCCCCCCTTCCCHHHHHHHHHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBSSSSCS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899899887789999989999999971996898416886588996599999999769764456555555444561001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~Dg~~H~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~~~~~ 160 (399)
T d1s1fa_ 81 PARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATD 160 (399)
T ss_dssp SCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEHHCCCCCHHH
T ss_conf 33452010586778999987484347412678999999999998620234565032024554433430001104883455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~tT~ 240 (399)
T d1s1fa_ 161 RHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVT 240 (399)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 44566677887512232046788888899999999987630223201232001256655507777777888751342222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~~l~~l~~~p~~~~~~~~~~~~~~~~~~e~~r~~p~~~~~~~~R~~~~~~~l~G~~ip~Gt~V~~~~~~~~rdp~~ 320 (399)
T d1s1fa_ 241 NNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEV 320 (399)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCEECCCCCCCCCCHHH
T ss_conf 20222122343085155431232013532122211246632223432100002540533533897501233334668110
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~~~~rg~~~lpv~~~~ 399 (399)
T d1s1fa_ 321 FPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWHA 399 (399)
T ss_dssp SSSTTSCCTTC--CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEEEC
T ss_conf 6995444889999997777988617815999999999999999997798788889666525168744287047899849
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=100.00 E-value=0 Score=30113.02 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~syRIPsLv~~~GtlLA~ae~R~~~~~D~~~idiv~rRS~D~GkTWs~~ 80 (399)
T d2ah2a2 1 LAPGSSRVELFKRQSSKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNSLIDTVAKYSVDDGETWETQ 80 (399)
T ss_dssp CCTTCEEEEEECTTTCEEEEEETTEEEEEECSEEEEEEEEEETTEEEEEEEEESSCSCSSSCEEEEEEEESSTTSSCEEE
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCE
T ss_conf 98886434203788765775568988985699991308999899999999179888998720378998532788578762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~v~~~~~~~~~~~~dP~~v~d~~~i~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~g~tWs~p~~i~ 160 (399)
T d2ah2a2 81 IAIKNSRASSVSRVVDPTVIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLK 160 (399)
T ss_dssp EEECCCCSSTTCEEEEEEEEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCCEECG
T ss_pred EEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 89724777776666688599849969999997658886221125788876258977998646798366773258832056
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~gi~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G~TW~~g~~~~~~~~~~~~v~~~dG~l 240 (399)
T d2ah2a2 161 EFFPAEMEGMHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAFGCSEPVALEWEGKL 240 (399)
T ss_dssp GGSCSEETTEEEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCCTTCEEEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEECCCCCCEEEECCCCEECCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCEE
T ss_conf 53465335753100526775303304863731337534887468899995899851683465589875566300358818
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ll~~R~~~g~r~v~~S~DgG~TW~~~~~~~~~v~~~~~~~~~~~~~~~li~~~~~~~~~lLfsnp~~~~~~~~r~~l~l~ 320 (399)
T d2ah2a2 241 IINTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEGMRVMLFTHPLNFKGRWLRDRLNLW 320 (399)
T ss_dssp EEEEECTTSCCCEEEESSTTSSCEECTTTTTTCBCSSTTSCSCCCCCCEEEEEETTEEEEEEEEECCSSCTTCCBCEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 99876278740699974898625433454433437776667874453135741389729999798886454435642899
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~Sdd~g~~w~~~~~i~~g~saYS~L~~~dg~ig~lYE~~~~~~~~i~f~rlT~el~~ik~v~~~w~~~d~~~~~~~~~~ 399 (399)
T d2ah2a2 321 LTDNQRIYNVGQVSIGDENSAYSSVLYKDDKLYCLHEINSNEVYSLVFARLVGELRIIKSVLQSWKNWDSHLSSICTPA 399 (399)
T ss_dssp EESSSCEEEEEECSCTTCBCCCEEEEEETTEEEEEEEEEETTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EECCCCCCCCCCEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8579984214722855898542576758998999998589970059983687899999999998987547874478899
|
| >d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30112.30 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~G~As~~~gttGG~~a~~~~v~~v~t~~el~~~l~~~~~~~P~vI~~~gti~~~~~~~~~~~~~~~~~~ 80 (399)
T d1bn8a_ 1 ADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKD 80 (399)
T ss_dssp CCGGGCCCCTTSSGGGSTTCCCTTTTCCGGGEEEECSHHHHHHHHCCTTCCSCEEEEECSEEESSBCTTCCBCCHHHHCC
T ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC
T ss_conf 95211113688750504898677887787746830889999999862369986699986679425665654444454334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~SNkTIiG~G~~~~i~g~gl~i~a~NVIirnl~i~ 160 (399)
T d1bn8a_ 81 PEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEFQ 160 (399)
T ss_dssp TTCCHHHHHHHTCHHHHCSSCCCSHHHHHHHHHHHHHHHHHEEEECSSEEEEECTTCCEEESCEEEECSEEEEEESCEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCEEEEECCEEEEECEEEE
T ss_conf 33353322234574342034666654322111021435522785279864984589708954579983746999592997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~DaI~i~~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~gs~~VTvS~n 240 (399)
T d1bn8a_ 161 DAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYN 240 (399)
T ss_dssp CCCCSSCEEETTSSSSCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETTCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECC
T ss_conf 17466666655666556767778658986686589988660267754444544456653333451653146404995774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~f~~h~k~~L~G~~d~~~~d~g~~~vT~hhN~f~~~~~R~Prvr~g~vHv~NNy~~n~~~~~~~~~~ya~~~~~~a~il~ 320 (399)
T d1bn8a_ 241 YYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYA 320 (399)
T ss_dssp EEEEEEECCEECCCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEE
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEECCCCCCEEEE
T ss_conf 15687524675678876434687359999327247645686303557888851767787655410002212456746999
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 EgN~F~~~~~~~~~~~~~~~~g~~~~~~gn~~~g~~~~~~~~~~~~~~~~~~p~y~y~~~~A~~v~~~V~a~AGAGkl~ 399 (399)
T d1bn8a_ 321 QNNVIDVPGLSAAKTISVFSGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN 399 (399)
T ss_dssp ESCEEECTTCCSGGGEEECTTCCBCEEESCEETTEECCHHHHTTCBSCCSCCCCSCCCCCCHHHHHHHHHHHCSTTSCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 8148878888655230102688459607847648453676676746565323456533479999998765258976159
|
| >d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30045.88 Aligned_cols=1 Identities=100% Similarity=1.367 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~kltl~d~~l~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvil~SH~GRP~g~~~~~~Sl~~~~~~L~ 80 (398)
T d1vpea_ 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLS 80 (398)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98762004847998999931477533995887289999999999999789989998378999998887668799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~l~~~v~f~~d~~~~~~~~~~~~l~~g~i~lLEN~Rf~~~E~~n~~~f~k~La~l~DiyVnDAFg~sHR~haS~~gi~~ 160 (398)
T d1vpea_ 81 ELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQ 160 (398)
T ss_dssp HHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGGG
T ss_pred HHHCCEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEECHHH
T ss_conf 63164079850368658899861578876897244442432333247799998605560342543566515875011345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~lps~aG~l~ekEi~~L~k~l~~~~~P~~aIlGGaKisdKi~~i~~L~~k~D~iiigG~~antfL~a~G~~iG~sl~e~~ 240 (398)
T d1vpea_ 161 FIPSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEED 240 (398)
T ss_dssp TSCEEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGG
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 46101147778789876422101467517996157635079999988875022232423789999974997788753412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~i~~~a~~~~~~i~lP~d~~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGP~G 320 (398)
T d1vpea_ 241 KIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMG 320 (398)
T ss_dssp GHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCC
T ss_conf 56789999987665288511001012110003566520213124798765321366500899998745576799974612
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~t~~~~~sIiGGGdT~aai~~~g~~~~f~hvSTGGGA~Le~L~G~~LPgi~aL~~~~a 398 (398)
T d1vpea_ 321 VFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASMRIKKA 398 (398)
T ss_dssp CTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHHTSSCCHHHHTSCBCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCC
T ss_conf 011662417999999999987238998999178999999972986796089677899999987999718999863549
|
| >d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=30044.63 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 m~~~~~~~~~~T~avH~G~~~~~~~~~~av~~PI~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LE 80 (398)
T d1qgna_ 1 MKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALE 80 (398)
T ss_dssp -CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 98534579976579968976898888899618830777578089899998743776796443998868999999999982
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~t~~v~~E 160 (398)
T d1qgna_ 81 GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTE 160 (398)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC
T ss_conf 99348896486468888876303455432322221011333210343456643222442210233432103563179705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 spsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~ 240 (398)
T d1qgna_ 161 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 240 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHHCCCEEEEECHHHCCCCCCEEEHHHCCHHHHHHHHHHH
T ss_conf 74300024321799999886449879961502144557722317989998100015765311100100013343221111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~G~~l~p~~a~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~ 320 (398)
T d1qgna_ 241 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 320 (398)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
T ss_conf 03677748979999998333477889999889999999999739882005788888993365554325898720466643
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 g~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~AL~~i 398 (398)
T d1qgna_ 321 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 398 (398)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 999999999972885626268788761121750113100899999965989297999761089999999999998429
|
| >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: NADH-dependent butanol dehydrogenase A (TM0820) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30038.56 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~M~~f~f~~p~~i~~G~g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~ 80 (398)
T d1vlja_ 1 HHHMENFVFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSK 80 (398)
T ss_dssp CCCCCCEEECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHH
T ss_pred CCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf 99888728758986998549999999999965998489998974787731999999999865991999867159989899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~~avi~~~~ 160 (398)
T d1vlja_ 81 VHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNGNAVITNEK 160 (398)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSSEEEEEETT
T ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEECC
T ss_conf 99876411456676688448863112788889886414556776436644367787335414654432113552132001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~K~~~~~~~~~p~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~s~~~a~~~~~~~~~~l~~~~~~~~~ 240 (398)
T d1vlja_ 161 TKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSPEISNEIAEGTIRTIMKMTERLIEKPDD 240 (398)
T ss_dssp TTEEEEEECGGGSCSEEEECGGGGGGSCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 25420232012443169985564077740001131266998866531021256434577899988740233664038987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~ar~~l~~a~~~a~~~~~~~~~~~~~g~~H~l~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~la~~l~~~~~ 320 (398)
T d1vlja_ 241 YEARANLAWSATIALNGTMAVGRRGGEWACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEG 320 (398)
T ss_dssp HHHHHHHHHHHHHHTSSTTTTTSCSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
T ss_conf 99987667789988888876530576402111112113455877022024016789999987574689999999738899
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~e~~~~~~~~l~~~~~~lglP~~L~elGi~~~~i~~ia~~a~~~~~~~~npr~~~~~~~~~l~~e~i~~Il~~A~~ 398 (398)
T d1vlja_ 321 EGEELILKGIEAFKNWLKKVGAPVSLKDAGIPEEDIDKIVDNVMLLVEKNLKPKGASLGRIMVLEREDVREILKLAAK 398 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCSTGGGTCCGGGHHHHHHHHHHHHHHTTGGGTCCSCSSSCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 819999999999999999859999989939999999999999996766427987676213334899999999999659
|
| >d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Citrobacter freundii [TaxId: 546]
Probab=100.00 E-value=0 Score=29968.59 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~d~k~~~f~T~~ih~G~~~~~~~g~v~pPI~~sST~~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg~~ 80 (397)
T d1y4ia1 1 SDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEA 80 (397)
T ss_dssp CCGGGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSCCCCSSHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99888981100376798888789992188028888650888999876347768966658988789999999999849962
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp~NP 160 (397)
T d1y4ia1 81 GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANP 160 (397)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 11106778888887763168998654301012331035431367785575414899989999865877738980487522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~ 240 (397)
T d1y4ia1 161 TLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDI 240 (397)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHT
T ss_pred CEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 11003307899886047852870275227154763202897899851351078741465215787889999999999967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~G~~l~p~~a~l~~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~~ 320 (397)
T d1y4ia1 241 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 320 (397)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
T ss_conf 49858989999997471769999999999999999999748996767488878996522223446778759999956999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGlEd~~DLi~Dl~~AL~~a~~ 397 (397)
T d1y4ia1 321 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKATF 397 (397)
T ss_dssp HHHHHHHHTCSSSEECSCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999997289362305637432032276312654589999997598929799976119999999999999987219
|
| >d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29967.29 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~r~ttfGESHG~aig~vIdG~PaG~~id~~~i~~~L~RRrpG~~~~~t~R~E~D~veilSGv~~g~TtG~PI~~~I 80 (397)
T d1q1la_ 1 SLRYLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEILSGVRFGKTLGSPIALFI 80 (397)
T ss_dssp CCSSCEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHTTCC------CCSCCEEEEESEETTEECSSCEEEEE
T ss_pred CCCEEEEECCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCEEEEE
T ss_conf 96569996034578984489980508488848999999985689899999866799984799145158980678559999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~N~D~~~~~y~~~~~~~~~~~~~~~~~pRPGHAD~~~~~KYg~~d~r~gggRsSaReTa~rVaAGaIAk~~L~~~gI~v~ 160 (397)
T d1q1la_ 81 RNRDWENWKEKMAIEGEPSPSVVPFTRPRPGHADLSGGIKYNQRDLRNILERASARETAARVAVGAVCKKFLSEFGIKIG 160 (397)
T ss_dssp ECSCC-------------------------------CTTTTTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 87876654543322356205554440488887536778874576666766514788999999999999999998498788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 s~v~~IG~i~~~~~~d~~~~~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~~r~~gDSvGG~ve~~~~gvP~GLGe 240 (397)
T d1q1la_ 161 SFVVSIGQKEVEELKDKSYFANPEKLLSYHEKAEDSELRIPFPEKDEEFKTYIDEVKEKGESLGGVFEVFALNVPPGLGS 240 (397)
T ss_dssp EEEEEETTEECGGGSSGGGGGCHHHHHHHHHHHTTSTTCCSCGGGHHHHHHHHHHHHTTTCCBCEEEEEEEESCCTTCSC
T ss_pred EEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
T ss_conf 89999866752434555445780233556887650750357656999999999999856886440699999658887667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 pv~~ddkLda~LA~AlmSIpAvKgvEfG~Gf~~a~~~GSe~nD~~~~~~~~~~~~~tN~aGGilGGISnG~pI~~rva~K 320 (397)
T d1q1la_ 241 HIQWDRRIDGRIAQAMMSIQAIKGVEIGLGFEAARRFGSQVHDEIGWSEGKGYFRHSNNLGGTEGGITNGMPIVVRVAMK 320 (397)
T ss_dssp SSSGGGCHHHHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTCCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 73444442489999875040144301265166776630235565313478873355667764245765886089999978
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 P~sSI~~~q~Tvd~~~~e~~~~~~gRhDpcivpra~~VvEAm~alvlaD~~L~k~g~d~~~~~~~~~~~y~~~~~~~ 397 (397)
T d1q1la_ 321 PIPTLKNPLRSVDIETKEEMKAGKERTDIVAVPAASVVGEAMLAIVLADALLEKLGGDFMEEVKKRFEDYVNHVKSF 397 (397)
T ss_dssp CCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 86446775636237898777502799898578763389999999999999999857984999999999999997529
|
| >d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29964.72 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~v~s~~v~y~~~~i~~~y~y~~t~v~~~~~~~~v~p~~~~~~f~t~~~vpklGVmLVG~GGnngTT~~aGv~Anr~g 80 (397)
T d1vkoa1 1 KRLIVESPNVKLEDGVLESRFTYRKNHFEHRADGLHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIFANQYA 80 (397)
T ss_dssp CCCCCCCTTEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCEEECCCEEEEEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 94488399738737558999886104999817935998767778998416688258998438840888999999998758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 L~w~tk~G~~~an~~GSltq~stirlG~~~~~~~~~~~P~kd~lPl~~p~DiVfGGWDI~~~nL~eAa~rA~VLd~~ll~ 160 (397)
T d1vkoa1 81 MTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGRAKVFEPELQE 160 (397)
T ss_dssp CEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEECSSCCCTTHHHHHHTCSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 97546677405886351443033575135789873356376517889821168944469999889999875999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~~~L~~i~P~psv~~pdfia~nq~~ra~nv~~g~~k~e~ve~Ir~DIr~Fk~~~~ldrVVVlwtAsTEr~~~~~~~v~ 240 (397)
T d1vkoa1 161 KLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLN 240 (397)
T ss_dssp HHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTT
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 99999860865542107277775135200151358889999999999999999974997699998158777777761200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~t~e~l~~ai~~n~~eIsPS~lYA~AAi~eG~pyiNgsPq~t~vPal~eLA~~~~v~iaG~DfKTLLaspliLDl~ll~e 320 (397)
T d1vkoa1 241 ATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSLLASPLIYDLAILTE 320 (397)
T ss_dssp SSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 16999999986699878859999999997599623699755666459999986199665257898755188886999996
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 l~~Ri~~k~~~~~~~~~~Vls~LS~~~KaPl~~~g~~~vn~l~kQr~~l~N~lR~~~Gl~p~~~m~lEy~~~lp~~k 397 (397)
T d1vkoa1 321 LASRVSYKVDDEYKPFHSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFFTQLPAAK 397 (397)
T ss_dssp HHTTEEEESSSSEECCCSBCGGGGGGBSSCCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGTSCCCCCC
T ss_pred HHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
T ss_conf 64178862254004752077776665268888999866028899999999999998299977754303310055579
|
| >d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29961.01 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia 80 (397)
T d3tata_ 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp CCCCCCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 96557778999488999997268998948850787738889988868999999999717666787898555899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~ 160 (397)
T d3tata_ 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred HHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHCCCEEEEEECCHHHCCCCCH
T ss_conf 99852259767767689845760377888988776533799833662667666279999869979997465142256420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i 240 (397)
T d3tata_ 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL 240 (397)
T ss_dssp HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHCCCCEE
T ss_conf 77899864066552899826899997841788999999999853694699415531001697533114554442277359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d3tata_ 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL 320 (397)
T ss_dssp ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98447665333576512110011678999988888887752256666078999999860788889999988889999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v~ 397 (397)
T d3tata_ 321 AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999848998648876898417841919999999999599995798879852599889999999999869
|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29959.20 Aligned_cols=1 Identities=0% Similarity=0.071 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~p~GL~N~GNtCY~NSvLQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~i~p~ 80 (397)
T d1vjva_ 1 QFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVLPV 80 (397)
T ss_dssp CCCCCCCEECCCSSCHHHHHHHHHHHHSHHHHHHHHTCCGGGCCSCTTSTTHHHHHHHHHHHHHHHHHHHCC-CCEECCH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98789988888884079999999998089999999817741011346654322589999999999999985898714879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~QqDa~Efl~~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (397)
T d1vjva_ 81 VLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQ 160 (397)
T ss_dssp HHHHHHHHHCGGGGCBC----CBCCCCHHHHHHHHHHHHHHHHTHHHHTTTCEEEEEEEEETTEEEEEEEECCCEESCEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCCCCCEECCEEEEEEE
T ss_conf 99999999704322465566634126689999999999987733213554155120058862336644213540211233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~l~i~l~R~~~~~~~~~~~k~~~~~~~~~~ld~~ 240 (397)
T d1vjva_ 161 CHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVA 240 (397)
T ss_dssp ECCCTTCCBHHHHHHHHHEEC---------CCCCEEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBCCSEEECG
T ss_pred EEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCEEECC
T ss_conf 46326412202778764366540534555787523220423238952377766654214556110327625267077525
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d1vjva_ 241 DMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEK 320 (397)
T ss_dssp GGBCHHHHHHHHHHHHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCHHCCCHHHHCCCCCCCCCCC
T ss_conf 32110233320015676644331111477777640468766532234200011000023100110001000135632123
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~Y~L~aVv~H~G~~~~~GHY~ay~r~~~~~~~W~~~nD~~V~~v~~~~V~~~~~~~~~~~aYlLfY~r~~~ 397 (397)
T d1vjva_ 321 GENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKGFGL 397 (397)
T ss_dssp TBCSSSEEEEEEEEEEESSSTTSSEEEEEEECSSCTTCEEEEETTEEEEECHHHHHGGGCCTTSCEEEEEEEEETTC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCCEEEEEEEEECCC
T ss_conf 67899888999999996599999682899989999898999989877799889998750899888189999996489
|
| >d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Bacterial glucoamylase, C-terminal domain species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
Probab=100.00 E-value=0 Score=29958.19 Aligned_cols=1 Identities=0% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~s~~~lk~~~~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~ 80 (397)
T d1lf6a1 1 NNFNGKANSLYYNSMMILKASEDKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDY 80 (397)
T ss_dssp CCTTTTCCHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99873799999999999998047789964897677886655689889997057272599999999985997999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~~~~~~G~~~~~~~~~G~~~~~~~q~D~~g~~i~a~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lWEe~~g~~~~t 160 (397)
T d1lf6a1 81 LAKVVKDNGMIPQNTWISGKPYWTGIQLDEQADPIILSYRLKRYDLYDSLVKPLADFIIKIGPKTGQERWEEIGGYSPAT 160 (397)
T ss_dssp HHHHHHHHSSCCSCBCTTSCBCCCCCCHHHHHHHHHHHHHTTCGGGTTTTHHHHHHHHHHHCSSBSSCTTSSCCBBCHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 99995325877887886798645677776699999999999753406899999999999838887655454457864203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~aL~~~a~la~~~g~~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T d1lf6a1 161 MAAEVAGLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYD 240 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67799999999999886088157999999999999999983428356610243200146666753110001245434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~lDasll~~~~~g~~~~~d~~~~~tl~~i~~~l~~~~g~~~~~~RY~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a 320 (397)
T d1lf6a1 241 QKEIVDPSFLELVRLGVKSADDPKILNTLKVVDSTIKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERG 320 (397)
T ss_dssp GGGCCCGGGGHHHHTTSSCTTCHHHHHHHHHHHHHSEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 67776778763110378788878999999999987166777666654454555343577677667868754999999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~g~~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~a~plaWS~A~~i~~~~~l~~~~~~~~~~~~~~~~~~ 397 (397)
T d1lf6a1 321 MYEIAAGKDATPYVKAMEKFANEGGIISEQVWEDTGLPTDSASPLNWAHAEYVILFASNIEHKVLDMPDIVYKRYVA 397 (397)
T ss_dssp HHHHHTTCCCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSSCSSCHHHHHHHHHHHHHHHHTSCTTSCHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
T ss_conf 99997117999999999976688886350046989984899954788999999999998649976666788887309
|
| >d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 5-aminolevulinate synthase species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=29887.88 Aligned_cols=1 Identities=0% Similarity=0.569 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~l~~l~~~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~ 80 (396)
T d2bwna1 1 DYNLALDKAIQKLHDEGRYRTFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSG 80 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCCEEEECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96799999999999859986342012246788740474027998289998852102768999999999999999589864
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Sr~~~G~~~~h~~LE~~lA~~~g~e~all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H 160 (396)
T d2bwna1 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH 160 (396)
T ss_dssp SBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHCCCCCCEEEEC
T ss_conf 55244587449999999999974998515540113778889998760367984310534223000143046667337632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di 240 (396)
T d2bwna1 161 NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDI 240 (396)
T ss_dssp TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCHHHCCCCEEEEE
T ss_conf 36877666776405667616999752367644466176899865424066501210110221666662233187312124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~ 320 (396)
T d2bwna1 241 FNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 320 (396)
T ss_dssp EEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 53124655533554353268999998751213453136757778899999997631207899999999999999889866
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 g~~~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw 396 (396)
T d2bwna1 321 GMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 396 (396)
T ss_dssp TCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9986899999799996999999999999999689899987899689997269998576699999999999999859
|
| >d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29883.49 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~f~~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~ 80 (396)
T d2q7wa1 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 96445547998599999998466899968830787658889989988999999999618988988997677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (396)
T d2q7wa1 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCC
T ss_conf 99861698666442013213417899999999886315650899816888430599998599067245434456542210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T d2q7wa1 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 57778988515838999568849949336889987788877048819998615354346986674286654562344211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d2q7wa1 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 33564434445777442446606899999865556665504445787899999999853913678999999999999999
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v~ 396 (396)
T d2q7wa1 321 MRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9999999999828988741564897179951879999999999689997799879952898788999999999869
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29882.37 Aligned_cols=1 Identities=0% Similarity=-1.690 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~ 80 (396)
T d1m7xa3 1 VVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLY 80 (396)
T ss_dssp CCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 96641024578889986799772571477899998879999999899999982998899698887899899896867587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
T d1m7xa3 81 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFL 160 (396)
T ss_dssp EECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 71824289899999999985420333201143446786555554567863235678778778877754467772358999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 240 (396)
T d1m7xa3 161 VGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGV 240 (396)
T ss_dssp HHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTTT
T ss_pred HHHHHHHHHHHCCCCEEEECHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 99999889985786323311423122010011111111103566550289999999999863479946997521787532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d1m7xa3 241 SRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQK 320 (396)
T ss_dssp TBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHGGGTTTTTSCEEEEECGGGSSTTSCCHHHHSCSSHHHH
T ss_pred CCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 22000354320334211022344430000013444422223100111055521222344322457774223688877899
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~la~a~llt~pG~P~IYyGdEiG~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~L~~lR~~~paL~~~~~~ 396 (396)
T d1m7xa3 321 FANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFD 396 (396)
T ss_dssp HHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCGGGTSCTTS
T ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 9999999999998178547056512487899998887782111476534279999999999999739876460789
|
| >d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Phase 1 flagellin superfamily: Phase 1 flagellin family: Phase 1 flagellin domain: Phase 1 flagellin species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29817.03 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~i~gl~qa~~N~~d~~s~lqtae~al~~~~~iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~ia~~T~fng~~ 80 (395)
T d1io1a_ 1 NIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVK 80 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC
T ss_conf 97138899998999999999999999999999999999999850578999999999999999999999999737028802
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Ll~Gs~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d1io1a_ 81 VLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQK 160 (395)
T ss_dssp TTTSCEEEEEECSSSTTCEEEEEECCCSTTTTTCTTCCCCCCCEEEEEECCCCSEEEEEEECBGGGSTTTCGGGCSSEEE
T ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23556725897247875058997123310001121100222322333211122222211013443222112232232100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (395)
T d1io1a_ 161 IDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAAL 240 (395)
T ss_dssp ECSSEEEETTTTEEEEEEEEETCSSCCEEEEEEECTTTCBEEESTTCCSCCTTSSCTTCCEEESEEEEEGGGCHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 01221111101110000011222221000110000133210011222111223444333210001000000120011100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (395)
T d1io1a_ 241 TAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSI 320 (395)
T ss_dssp HHTTCCSCEEEEEEEEECTTSCEEEEEEEEEETTEEEEEEECTTSCEEECBCCBBCSSSSCBCCBEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 00012233222221113421100145532112221001101222332123322222200233102222234341035412
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~v~t~~~A~~Al~~iD~Ai~~v~~~Ra~lGA~qNRle~ti~NL~~~~~N~~aar 395 (395)
T d1io1a_ 321 GGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLAAVQNRFNSAITNLGNTVNNLTSAR 395 (395)
T ss_dssp TTEEEEHHHHTTCBTTTSCCCCCCCCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 551021123455332222102466488899999999999999999998755698868999998999999998519
|
| >d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29812.15 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ld~~g~~~~~~~~~~ls~e~l~~~Yr~M~~~R~~e~~~~~l~~~G~i~~ 80 (395)
T d2bfda1 1 KPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISF 80 (395)
T ss_dssp CCCCTTCCCCCCSSCCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99899987756655455787667888806778999999884236998999999999999999999999999996897012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~GqEA~~vg~~~al~~~D~~~~~yR~h~~~la~G~~~~~~~ael~g~~~g~~~Grggs~H~~~~~~~~~~~~~ivg 160 (395)
T d2bfda1 81 YMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLA 160 (395)
T ss_dssp CCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTT
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 50898869999999997697780134445367244431789999998740035764456654443323346311344334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~yaist~~~~~~~~~~i~~ra~~ 240 (395)
T d2bfda1 161 TQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPG 240 (395)
T ss_dssp THHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGG
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHC
T ss_conf 55107888888765037654443114788754113889999986237743799986133422200210011168876310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~gi~~~~vDG~Dv~aV~~a~~~A~~~~R~g~gP~lIE~~TyR~~~Hs~~DD~~~YR~~~Ei~~w~k~DdPi~~~~~~Li~ 320 (395)
T d2bfda1 241 YGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLS 320 (395)
T ss_dssp GTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 35541688337389888888876433312687537887663588887767732466889999988549899999999998
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~g~~s~ee~~~i~~e~~~eV~~A~~~A~~~p~P~~~~l~~~VYae~p~~l~eq~~~~~~~~~~~~e~~~~~~~~~ 395 (395)
T d2bfda1 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK 395 (395)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGBCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
T ss_conf 799999999999999999999999999858997989998450159997799999999999996725388455349
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=100.00 E-value=0 Score=29809.81 Aligned_cols=1 Identities=0% Similarity=0.736 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~ 80 (395)
T d2py6a1 1 DPLAMNDSFLAAADALAVDPMFGIPANVREVIARRGNATRLVILGTKGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYY 80 (395)
T ss_dssp CGGGHHHHHHHHHHHHHHCTTTTSCHHHHHHHHHHGGGCEEEEECSSSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEET
T ss_pred CCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEEC
T ss_conf 94116778887788754472320868899999850897528997686458999999987794699996684232286533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~pv~s~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d2py6a1 81 GLPIISTDRFTELATHDRDLVALNTCRYDGPKRFFDQICRTHGIPHLNFEQAVRAFGLQGNVDYRVDDWGADIVRNIPAF 160 (395)
T ss_dssp TEEEECHHHHHHHHHTCTTEEEEECCCSHHHHHHHHHHHHHTTCCEEEHHHHHHHTTCTTSSCGGGSCCHHHHHHTHHHH
T ss_pred CEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55751678864344226857999813641122589999876598400157778873774234402444589999869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~L~D~~S~~~~~~~l~~rl~~d~~~~~~~~~~~~~~YF~~~i~~l~kn~vfIDVGAniG~~s~~f~~~~~~~~~k 240 (395)
T d2py6a1 161 QTLAQRLADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLLRFSDSEKMVDCGASIGESLAGLIGVTKGKFER 240 (395)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHHHHCCTHHHHHHCCCGGGTTTSSSSCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSE
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf 99998713776599999999998639989985135758776543404676799899997758778899999966899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 V~aFEP~p~n~~~LkkNi~~n~~~n~~~~I~~~~~alsd~~~~~~f~~~~~~~s~~~~~~~~~~~~~~V~~~tLD~l~~~ 320 (395)
T d2py6a1 241 VWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGENTIRVPFNHEGGHGGFVKPADADHEPADLIDVRPIDDIIDD 320 (395)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSSCEEEEC--------------------CEEEEECHHHHCSS
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC
T ss_conf 99993987999999999985622255543999998961661389985179865310135667775189998788995378
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~id~IKIDVEG~E~~VLkGa~~~Lk~~kPiI~IEiyh~~~d~~~i~~~L~~l~~~Y~~~lR~h~~~~~d~vlY~~ 395 (395)
T d2py6a1 321 APTFIKMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYILSIRPDYQIGLRHHTPDRWDTCLYFY 395 (395)
T ss_dssp CCSEEEECCSSCHHHHHHTTHHHHHHHCCEEEEECCSSTTHHHHHHHHHHHHCTTCCEEEEECSSSSCCEEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEC
T ss_conf 998899968998799999789999867987999995257659999999998636974999668987501489859
|
| >d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Aldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29808.28 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 vad~~~f~~~~~~~~~~~~~~p~~~~~l~~~GT~~~~~~~~~~g~lP~~Nf~~g~~~~a~~isge~~~~~~~~r~~~C~~ 80 (395)
T d1aora1 1 IADKQKFMLVVREKVNKLRNDPVAGGGLPKYGTAVLVNIINENGLYPVKNFQTGVYPYAYEQSGEAMAAKYLVRNKPCYA 80 (395)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSHHHHTHHHHHCGGGHHHHHHHTTCCCBTTTTBSCCTTGGGGSHHHHHHHTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 98989999999999999982970415321109299999998769877488888889971542899999986146999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Cpi~C~~~~~~~~~~~~~gpEYEt~~a~Gs~~Gi~d~~~v~~~n~l~d~~GlDtIs~G~~ia~amE~~e~Gll~~e~~gd 160 (395)
T d1aora1 81 CPIGCGRVNRLPTVGETEGPEYESVWALGANLGINDLASIIEANHMCDELGLDTISTGGTLATAMELYEKGHIKDEELGD 160 (395)
T ss_dssp CSSCCEEEEEETTTEEEECCCHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 98674834770688753687730110300124899999999999999996813887868999999999779887242066
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~l~wGd~e~~~~li~~IA~r~g~G~~LA~G~~~aae~~G~~~~a~~vkg~e~p~~dpr~~~g~~l~yat~~~G~~H~~ 240 (395)
T d1aora1 161 APPFRWGNTEVLHYYIEKIAKREGFGDKLAEGSYRLAESYGHPELSMTVKKLELPAYDPRGAEGHGLGYATNNRGGCHIK 240 (395)
T ss_dssp SCCCCTTCTHHHHHHHHHHHTTCTTHHHHTTCHHHHHHHTTCGGGCCEETTEECCSCCGGGCHHHHHHHHHCTTSSCSGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCCHHHH
T ss_conf 77879999999999999998467417888223999999959823546744777443377653132311001577640233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~e~~g~~~~~dp~~~~e~k~~~~~~~q~~~~~~dslg~C~F~~~~~~~~~~~~~~~avTG~~~t~e~l~~~geRi 320 (395)
T d1aora1 241 NYMISPEILGYPYKMDPHDVSDDKIKMLILFQDLTALIDSAGLCLFTTFGLGADDYRDLLNAALGWDFTTEDYLKIGERI 320 (395)
T ss_dssp GCTHHHHTTCSSSCCCTTCCSHHHHHHHHHHHHHHHHHHHHTCCGGGGTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 22244754389765785514379999999999999996013434413667999999999997538899999999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~l~R~fN~r~G~~~~~dD~lP~r~~~ep~~~G~~kg~~~~~e~~l~~YY~~rGWd~~G~Pt~e~L~~LgL~d~~ 395 (395)
T d1aora1 321 WNAERLFNLKAGLDPARDDTLPKRFLEEPMPEGPNKGHTVRLKEMLPRYYKLRGWTEDGKIPKEKLEELGIAEFY 395 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHSCCCHHHHHSCCCSSTTTTCCCCHHHHHHHHHHHHTCCTTSCCCHHHHHHHTCGGGC
T ss_pred HHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 999999999747983654569887724888878777876789999999999839898898799999976891339
|
| >d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V beta chain (RecB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29806.91 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~g~~~p~~~~w~~~~~~~~~~~~~~~~A~~~A~~I~~ll~~~~~~~~~~~~~~~~r~v~~~DIAILvR~~~~~~ 80 (395)
T d1w36b2 1 ALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAA 80 (395)
T ss_dssp TEEEEETTEEECSEEEEECCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHTTCEEEEETTEEEECCGGGEEEEESSHHHHH
T ss_pred CCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf 95367889768700210389876551309999999999999999971203653004677767788143899983766699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~i~~aL~~~gIP~v~~~~~~~l~~~~ev~~llalL~~l~~p~d~~~l~~~L~sp~~gl~~~~l~~~~~~~~~~~~~~~~~ 160 (395)
T d1w36b2 81 QVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEF 160 (395)
T ss_dssp HHHHHHHTTTCCEEETTCCCBGGGSSHHHHHHHHHHHHTCTTSHHHHHHHHHSGGGTCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999998599859935875432569999999999977455647889998708556999999998751267799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~e~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 240 (395)
T d1w36b2 161 DGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQ 240 (395)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHSSSHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCCSTTB
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999998634258999999875499999863671799999998999999998745778899999999986143231233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~daV~ImTIHkSKGLEfpvVflp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~Ee~RLlYVA 320 (395)
T d1w36b2 241 QMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVA 320 (395)
T ss_dssp CCCCTTGGGSEEEEETTTTSSCCEEEEEETTTTCCCCCCSCEEECTTTCCEEEESSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10110256508997114530677778997167668886556666555532225766465578898899999997454645
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 lTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~ 395 (395)
T d1w36b2 321 LTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQV 395 (395)
T ss_dssp HTTEEEEEEEEECCCCCSCSCCSSCCGGGGSHHHHHHTCSSCCCHHHHHHHHHHSCSTTEEEEECCCCCCCCCCC
T ss_pred HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 734726118997555666788788865778799999707888886779998987457876667789998999879
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29806.73 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllR 80 (395)
T d1nw1a_ 1 GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLR 80 (395)
T ss_dssp CHHHHHTTCCTTCCGGGCHHHHHHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 94445045654566543615899999999986711026899301699991785334348999688775445789817999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~ 160 (395)
T d1nw1a_ 81 VYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEP 160 (395)
T ss_dssp EECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSS
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 65996116589999999999975799980899818956999734554883331465555999999999850332236675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~~~~~~~ 240 (395)
T d1nw1a_ 161 DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNI 240 (395)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC
T ss_conf 42888999999765431237776434555302444499999999999987430369846885578856376536433222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~ 320 (395)
T d1nw1a_ 241 RMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFL 320 (395)
T ss_dssp ------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34553100023444322356888827998542367885066599999997055677666532134234939999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~~~s~l~W~lW~~iq~~~~~~~fDy~~Y~~~Rl~~y~~~k~~l~~~~ 395 (395)
T d1nw1a_ 321 NYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA 395 (395)
T ss_dssp HHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTHHHHHTTC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999873666510679999999999999998857899999999646448998999999999999999999887119
|
| >d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative alanine aminotransferase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29803.78 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~s~r~~~~~~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia 80 (395)
T d1xi9a_ 1 SIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 80 (395)
T ss_dssp CCCCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred CCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 96300040357478999999999999779970899899999789999799999999999638898899978999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~ 160 (395)
T d1xi9a_ 81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 160 (395)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 86432045231212232322220132100121047999899838833331000320597799984332235431278899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 240 (395)
T d1xi9a_ 161 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF 240 (395)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC
T ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHCC
T ss_conf 76402650899669989754101179999998555425855774121000132222345032078888899958622142
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 320 (395)
T d1xi9a_ 241 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320 (395)
T ss_dssp CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CCHHHCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 54010076685187999999999988864378784799999999986087999999999999999999999986799411
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l~er 395 (395)
T d1xi9a_ 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 395 (395)
T ss_dssp CCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 589855898178888899999999999999699999847332889979799996489999999999999999549
|
| >d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp121 monooxygenase (P450 Mt2) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=29802.78 Aligned_cols=1 Identities=0% Similarity=-0.362 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~LR~~~Pv~~~~~~~g~~~wvvt~~~dv~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
T d1n40a_ 1 TATVLLEVPFSARGDRIPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPE 80 (395)
T ss_dssp -CCCCCBSCCCCCSSSCCHHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99877789988777677399999995299789874899769997799999999769774768776677654444447817
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~d~~~H~~~R~~~~~~Fsp~~~~~~~~i~~~~~~ll~~l~~~g~~~Dlv~~~a~~l~~~vi~~llG~p~~d~~~~~ 160 (395)
T d1n40a_ 81 VVNNMGNIADAGLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLF 160 (395)
T ss_dssp GGGHHHHHHHTTCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76537871579999999987309999988789999999862033356664418888777655457777522345677777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~ 240 (395)
T d1n40a_ 161 RSLSIAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF 240 (395)
T ss_dssp HTHHHHTBCCSSCCHHHHHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 65433333200136999999999999878899875103677777666430566665540035678999875200012335
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~~l~~L~~~P~~~~~l~~e~~~~~~~i~E~lRl~~p~~~~~~R~a~~d~~i~G~~ip~G~~V~~~~~~a~rDp~~f~d 320 (395)
T d1n40a_ 241 LTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320 (395)
T ss_dssp HHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 67888877629630001110123433323320134554543212210232112234565542022201212456200898
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 P~~F~p~R~~~~~~l~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~~r~~~~LpV~~ 395 (395)
T d1n40a_ 321 PGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395 (395)
T ss_dssp TTSCCTTCSSTTCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEEC
T ss_conf 021387899998877779988369149999999999999999967997888885667461686333871216569
|
| >d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29736.35 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 M~~ktl~d~d~~~K~VlvR~D~NvPi~~g~I~d~~RI~~~~pTI~~ll~~~akvvl~SH~GRPkgk~~~~~Sl~~~~~~L 80 (394)
T d1phpa_ 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRL 80 (394)
T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99785111376799999994058776099389758999999999999978998999858889999888655569999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~~v~f~~~~~~~~~~~~i~~l~~g~i~lLEN~Rf~~~E~~nd~~fak~La~l~DiyVNDAF~~aHR~haS~~gi~ 160 (394)
T d1phpa_ 81 GELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIA 160 (394)
T ss_dssp HHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGG
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCHH
T ss_conf 87406241113443567899999605789788635445354432153889974254488999665136551477511000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~lps~aG~l~ekEi~~L~~~l~~p~rP~~aIiGGaKisdKi~~i~~l~~k~D~i~igG~mantfl~a~G~~iG~sl~e~ 240 (394)
T d1phpa_ 161 HYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEE 240 (394)
T ss_dssp GTSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 02662001108999999999973899976999706763327999987875357278742287999998599667324331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~a~~i~~~~~~~~~~i~lP~D~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmG 320 (394)
T d1phpa_ 241 DKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMG 320 (394)
T ss_dssp GGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCEE
T ss_conf 14778999998776429865588630432123455662477701214786003567248999999986530589955523
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~~~a~sivGGGdT~aai~~~g~~~~~shvSTGGGA~Le~L~G~~LPgi~aL~~k 394 (394)
T d1phpa_ 321 VFEMDAFAHGTKAIAEALAEALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALEDK 394 (394)
T ss_dssp CTTSGGGCHHHHHHHHHHHHCTTCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHHTTCCCHHHHTSCBC
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 56346241899999999996589869995779999999749867885796678999999879997358785169
|
| >d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Trichomonas vaginalis, MGL1 [TaxId: 5722]
Probab=100.00 E-value=0 Score=29736.24 Aligned_cols=1 Identities=100% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~T~~vh~g~~~d~~gav~~PI~~sst~~~~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~~~a~~~ 80 (394)
T d1e5ea_ 1 ERMTPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 80 (394)
T ss_dssp CCCCHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHEECCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99997899646889989999830880488886518889998751688678534598887899999999998298502234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~~~~~i~~~t~lv~~Etp~NP~l~v 160 (394)
T d1e5ea_ 81 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKI 160 (394)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEE
T ss_conf 36228889998740233443344541320036767777630543542147899999997516456589994257763122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~ 240 (394)
T d1e5ea_ 161 IDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGS 240 (394)
T ss_dssp CCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCC
T ss_pred EHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 12444420132456708873376547645784011798899612342078743233334431468999999999973277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~lsp~~a~ll~rgl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~~~~~a 320 (394)
T d1e5ea_ 241 VISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGA 320 (394)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHH
T ss_conf 78867799999601068899999988899999997652884577577756632155530344667872454026989999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAl~~l~~ 394 (394)
T d1e5ea_ 321 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDALLR 394 (394)
T ss_dssp HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998088061535668766035785102521189999996698939799976218999999999999999639
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29734.39 Aligned_cols=1 Identities=0% Similarity=0.070 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~p~~~~~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln 80 (394)
T d1qo7a_ 1 KAFAKFPSSASISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLN 80 (394)
T ss_dssp CTTCCCCTTCCSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99788999897787364635899999999999984478997445677753459889999999998634389899999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 81 SFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp TSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCCCEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 68975999879888999972258998779993665411899999887641135776550444345424347889998777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARME 240 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 65788999999998764047624899840765178999887512521015764034322344321000135677888777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~ 320 (394)
T d1qo7a_ 241 KFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTAS 320 (394)
T ss_dssp HHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 77775555555430125555432024520046677787642244568879999999987500132056799999842235
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v~ 394 (394)
T d1qo7a_ 321 APNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 394 (394)
T ss_dssp ------CTTTTTCEEEEEEEEECTBSSSCCCHHHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHC
T ss_conf 66222321237840687589980888532589999864684699985994781478699999999999999759
|
| >d1u1ha1 c.1.22.2 (A:2-395) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29734.10 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~lG~PRig~~RELK~A~E~yw~G~is~~eL~~~~~~~~~~~~~~Q~~aGid~I~~GeFs~yD~vLD~~~~~g~iP~R 80 (394)
T d1u1ha1 1 ASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPR 80 (394)
T ss_dssp CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 98767589889761899999999779999999999999999999999998599961559840258899999981996534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 f~~~~~~~~ld~yFa~arg~~~~~a~emtkwfdtnyhy~vPe~~~~~~~~l~~~~~~~~~~ea~~~g~~~Kpvl~GP~T~ 160 (394)
T d1u1ha1 81 YGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSY 160 (394)
T ss_dssp GCCCSSSCCHHHHHHHHHCBTTBCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 44445666288887887258764444554345789774577407886345540168999998763487646245778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~l~k~~~~~~~~~~~~~ll~~L~~aY~~~l~~L~~aG~~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~i~l~ 240 (394)
T d1u1ha1 161 LLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVE 240 (394)
T ss_dssp HHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHHHHHHHHHHHTTTTTTSEEEEE
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 97753247876544799999999999999999987665988986062021369999999999999999864489974378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 tyfg~~~~~~~~~l~~~~~Vd~l~lD~~~~~~~l~~~~~~~p~~k~L~~GVVdgrniw~ed~e~v~~~i~~~~~~v~~er 320 (394)
T d1u1ha1 241 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDK 320 (394)
T ss_dssp CCSSCCCHHHHHHHTTCTTCCEEEEETTTCTTHHHHHHHCCCTTCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHSCSSC
T ss_pred ECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 60488763568888636798735788523851148898758755689754681478886999999999999997379200
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 l~lspsCsLlh~P~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~r~~s~~~~n 394 (394)
T d1u1ha1 321 LVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTN 394 (394)
T ss_dssp EEEEESSCGGGSCSCGGGCCSSCHHHHHTBCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHCTTTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99938998767787174335799889845151999999999999997288308999999999998843887789
|
| >d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=29732.57 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~ 80 (394)
T d2ay1a_ 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98778878998399999997178998978851787658889989888999999998508878988997778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 160 (394)
T d2ay1a_ 81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK 160 (394)
T ss_dssp HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred HHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHCCCCCCHHHH
T ss_conf 97365654346420003572688889988765428844999832321011899998599799941430101442202688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 240 (394)
T d2ay1a_ 161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS 240 (394)
T ss_dssp HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 88764136868999479999899989999999999875304289987525122211666664045544443245443345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 320 (394)
T d2ay1a_ 241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE 320 (394)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55666677654201030426899999865366765202423224788889887227888999999999999999999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v~~ 394 (394)
T d2ay1a_ 321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV 394 (394)
T ss_dssp HHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99999998489886036779961698519399999999996898956987899537998889999999998279
|
| >d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29729.18 Aligned_cols=1 Identities=0% Similarity=0.569 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~~~~~~~~dp~~~lr~~~p~~~~~~~~~~~~~~~w~vt~~~dv~~Vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T d1lfka_ 1 DPRPLHIRRQGLDPADELLAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPREL 80 (394)
T ss_dssp CCSCGGGCEETTEECHHHHTSCSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CC
T ss_pred CCCCHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98961104235995799997499058978888888668996799999999759864547765565444565433340432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~ll~~Dg~~H~~~R~~l~~~fs~~~v~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~~~~ 160 (394)
T d1lfka_ 81 VGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRD 160 (394)
T ss_dssp TTCGGGCCTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHH
T ss_pred CCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHH
T ss_conf 34133048756899998854331999999998899999999986520268763025676541111021100475301389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~ag~~tt~~~ 240 (394)
T d1lfka_ 161 MFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGM 240 (394)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998862233210037999999999999999999864002210000001013678989999999999998643205889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~r~~~~~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rdp~~~~d 320 (394)
T d1lfka_ 241 IGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD 320 (394)
T ss_dssp HHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999875222045543101223332110000000023321012113567121483542687401232334679212667
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 P~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~~f~~~~l~~p~~~~~~~~~~~~~g~~~lpv~~ 394 (394)
T d1lfka_ 321 VDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW 394 (394)
T ss_dssp TTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEC
T ss_conf 33218899999988878987578069999999999999999967988778886766030687777870005359
|
| >d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystalysin species: Treponema denticola [TaxId: 158]
Probab=100.00 E-value=0 Score=29728.09 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~f~~~~~r~~~~s~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~ 80 (394)
T d1c7na_ 1 MIYDFTTKISRKNLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMK 80 (394)
T ss_dssp CCCCSCCCCCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97678977677999878899999876754997688327997999889999999999857886899987999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~g~~~~~~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~ 160 (394)
T d1c7na_ 81 DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLS 160 (394)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 85599888750476334212343321034444332333467662046677654300222222245655540255666553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (394)
T d1c7na_ 161 KDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF 240 (394)
T ss_dssp TCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCC
T ss_conf 04563299945523565412569995343203454320586145532124588666410111002311103234542001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~G~R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 320 (394)
T d1c7na_ 241 NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (394)
T ss_dssp TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEC
T ss_conf 22222322223567033445555543003443222221024554200144301311121012321000121256530422
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk 394 (394)
T d1c7na_ 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK 394 (394)
T ss_dssp CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 78950489897888899999999999986999997423418899987999995899999999999999999639
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=0 Score=29728.08 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~rGvNlGgwlv~E~w~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~ 80 (394)
T d2pb1a1 1 AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNL 80 (394)
T ss_dssp CCCTTTCCEEEEECTTSSSCCTTTCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 97888977898864334305765583344313677765443201888998739687999999998604889999999977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~~~~~~~~~~~~~~~ 160 (394)
T d2pb1a1 81 GLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLN 160 (394)
T ss_dssp TCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSTTHHHHHHH
T ss_pred CCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99889998027884488877552368999999999999799189998511588666767767667644366779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d2pb1a1 161 VLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW 240 (394)
T ss_dssp HHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCC
T ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999999715887770688741356786654378999999999999997389976998488755344444315788886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~ 320 (394)
T d2pb1a1 241 NVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSC 320 (394)
T ss_dssp SEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHHHHHTCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCS
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 27985311434678655689888787663034555315676120201023005666623655342214654787655646
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~~~~~~~~~~~c~~~ 394 (394)
T d2pb1a1 321 QPLLDISQWSDEHKTDTRRYIEAQLDAFEYTGGWVFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH 394 (394)
T ss_dssp GGGSSGGGCCHHHHHHHHHHHHHHHHHHHTTTEEEESCSCCSSCGGGCHHHHHHTTCSCSSTTCCSSTTSSCCC
T ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCC
T ss_conf 66567101678899999999999999985279678963016999988889998788969991323688888999
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29733.21 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~s~e~i~~l~KRRgFv~pS~EIYGGlaG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv 80 (394)
T d1atia2 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHE 80 (394)
T ss_dssp CCCCHHHHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHH
T ss_pred CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
T ss_conf 93209999999984577415712226710155768427999999999999987540477777513344898886206787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~F~D~mv~c~~~~~~~RaD~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t 160 (394)
T d1atia2 81 ATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWT 160 (394)
T ss_dssp HHCEEEEEEC--------------------------------------------------------------------CC
T ss_pred CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 88764420267777532022677665565543321134555666889999875476866525876178899889867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~FNLMF~T~iGp~~~~~~~~yLRPETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~Ei 240 (394)
T d1atia2 161 PPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEI 240 (394)
T ss_dssp CCEEEECBEEEECSSCCCGGGEEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEE
T ss_pred CCCHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 50022100012323345656336777013069999799999971567880112432211466376557756332212026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 E~Fv~P~~~~~~~~yw~~~~~~f~~~lGi~~~~lrfrqh~~~ElAHYa~~~~DiE~~fp~Gw~El~GiA~RtdyDL~~H~ 320 (394)
T d1atia2 241 EYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHT 320 (394)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETTEEEEEEEEEECTTHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCEECHHHHCCCHHHHHHHH
T ss_conf 89981785157788899999999998368833336775052355540545278999669985840413143121478776
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 k~~~~~~~~~~~~~~~~s~~~l~~~d~~~~~~~iPhVIEPS~GldR~~la~L~~ay~eee~~~~e~R~vLkl~P 394 (394)
T d1atia2 321 KDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKP 394 (394)
T ss_dssp SSTTTTTCCSCCCCCSCCCSCCCEECSSSCCEECCEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCG
T ss_pred HHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 42033202344312777663467880678907850178758882189999999876434227997259983599
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=0 Score=29725.47 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~d 80 (394)
T d2d3na2 1 TNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ 80 (394)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98627887742657889719999998999997199989979570178878889786667554434446776888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 f~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T d2d3na2 81 LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG 160 (394)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999987998999971266567664310012235765433334564443444345676556778765444445787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~ 240 (394)
T d2d3na2 161 VDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYS 240 (394)
T ss_dssp ESCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 65556668888754006888765666652323420267762155888998788876565420567314774224437767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (394)
T d2d3na2 241 FTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPSH 320 (394)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCGGG
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 89999999987408740210212366632120010033442111037899999999840760539998721511069868
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~v~fl~NHD~~r~~~~~~~~~~~~~~la~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~r~~~~~l~~~r~~~~~ 394 (394)
T d2d3na2 321 AVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQKYAY 394 (394)
T ss_dssp EEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 05767288686524455673199999999999984999679972672098998895548999999999998479
|
| >d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29726.70 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~y~Gg~V~~p~~G~~~~v~~lDf~SLYPsii~~~Ni~p~t~v~~~~~~~~~~~~~~~~~~~~~~~~g~lp~~ 80 (394)
T d1q8ia2 1 NLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIVRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEI 80 (394)
T ss_dssp CTTCSCCCCCCCCCCBCCCCEEEEEEEEEEETTHHHHHHHHHCCCHHHHHHHHHSCSTTTEEECSTTCEEESSSCSHHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
T ss_conf 99888998899837837999757885588831127999999679965437877678876555786543332001178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~l~~~R~~~K~~~~d~~Q~a~Ki~~NS~YG~~g~~~~~~~~~~~A~~iT~~Gr~~i~~~~~~~e~~g~~ViygDTDSi 160 (394)
T d1q8ia2 81 VTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDST 160 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEE
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999742100002321024789871221206002455521136788889888589999988631223466650356418
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~E~~~~~~~~~~kk~~~~~~kkrY~g~~~~~~~~~~ 240 (394)
T d1q8ia2 161 FVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRM 240 (394)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEECCCCTTCTTCCSCEEEEEEETTEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHEEEEHHHHHHHHHHHHHHHCCEEECCCCEE
T ss_conf 99947971245677889999998877656676665113432002553200000022112113234433000011233247
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~KG~e~vRrd~~~~~k~~~~~vl~~i~~~~~~~e~vk~~~~~l~~~~i~~~~i~~~~l~k~~~~y~~~~~~hV~~a~~~ 320 (394)
T d1q8ia2 241 VFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 320 (394)
T ss_dssp EEESSCC--CCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTGGGGCC-------------------------
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 88750014666662677898989999963626888899999987605877045044543156000356787699999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~g~~i~Yv~~~~~~~~~~~~~~~iD~~yYi~~qi~~~~~ril~~~~~~~~~~~~~~~~LF 394 (394)
T d1q8ia2 321 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF 394 (394)
T ss_dssp -----------------------------------CCCCHHHHHHHTHHHHHHTTGGGGTCCHHHHHHHHHCC-
T ss_pred HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
T ss_conf 98766327988899898679999899986577548998789999974089999998762788999974686889
|
| >d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Cullin repeat-like family: Cullin repeat domain: Cullin homolog 1, Cul-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29730.85 Aligned_cols=1 Identities=0% Similarity=-1.855 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~d~~W~~L~~ai~~I~~~~~~~~~~~~~lY~~vy~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~LY~~l~~~l 80 (394)
T d1ldja2 1 LDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFL 80 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTCCC----------------------------TTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96349999999999986699997999999999999994487432000111101121000121025457999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~i~~~~~~~~~~~~L~~~~~~W~~~~~~~~~l~~if~YLdr~yv~~~~~~~~~~~~~I~~~~l~~fr~~v~~~~~ 160 (394)
T d1ldja2 81 KNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLN 160 (394)
T ss_dssp HHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSSCCC-------CCHHHHHHHTTHHHHTTTTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999877437879999999999999999999999999886689988604445666541999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~l~~~il~~I~~~R~g~~i~~~li~~~i~~l~~l~~~~~~~~~~~~~~~~Y~~~FE~~~L~~t~~~Y~~~~~~~l~~~~ 240 (394)
T d1ldja2 161 KQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 240 (394)
T ss_dssp THHHHHHHHHHTTTSCCTTCCTHHHHHHHHHHHHTSCCSSSSSCSSCCCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998678966699999999999994832323330132278878998999999999999999999998498
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~eYl~~v~~~l~eE~~r~~~yl~~~t~~~l~~~l~~~LI~~~~~~l~~~~~~ll~~~~~~~L~~lY~L~~rv~~~~~~l 320 (394)
T d1ldja2 241 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGEL 320 (394)
T ss_dssp TTSSHHHHHHHHHHHHHTTTTTTCSSSSHHHHHHHHHHHSSSSSHHHHHHHHHHHHSCCTTHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 35899999999999999999746864699999999999999999999999999987165889999999986553518999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~I~~~G~~~i~~~~~~~~~~~~~~V~~ll~l~~~~~~ii~~~F~~d~~f~~~l~~af~~fiN~n~~~~ 394 (394)
T d1ldja2 321 KKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTK 394 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999997233114578689999999999999999999859988999999999999837666689
|
| >d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-lyase (CYS3) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29655.93 Aligned_cols=1 Identities=0% Similarity=-0.625 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 t~~~~~~f~T~~vHag~~~d~~gav~pPI~~ssTf~~~~~~~~~~~y~YsR~gnPT~~~lE~~la~LE~~~~a~~~sSGm 80 (393)
T d1n8pa_ 1 TLQESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGS 80 (393)
T ss_dssp CCCSSCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHH
T ss_pred CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 99878981042077898899898826882788765138864535773353899868999999999971995488834701
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 aAi~~~l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~i 160 (393)
T d1n8pa_ 81 ATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKV 160 (393)
T ss_dssp HHHHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEEECCCCHHHHHCCCHHHH
T ss_conf 67776653035798344322001340344454541255225885135689999851201346723763234320203555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p 240 (393)
T d1n8pa_ 161 ADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSP 240 (393)
T ss_dssp HHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCH
T ss_conf 54444201467845998567447044770541898999816644579886026301102166999999998643888986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~a~ll~rgl~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~~~~~~ 320 (393)
T d1n8pa_ 241 FDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAAS 320 (393)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88999982775034679999998888999997336727997302334543200222103457877148999959999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGlE~~~DLi~Dl~~AL~~a~~ 393 (393)
T d1n8pa_ 321 KFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQATN 393 (393)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEECCCCCCCCCEEECCHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 9997188443561677757147376022542289999996598949799986528999999999999999649
|
| >d1xlma_ c.1.15.3 (A:) D-xylose isomerase {Arthrobacter, strain b3728 [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Arthrobacter, strain b3728 [TaxId: 1663]
Probab=100.00 E-value=0 Score=29653.27 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~~~~f~~~~Wt~~~~g~dpFG~~t~~~~d~~~~~~~~~~lG~~~~~fHd~D~~p~~~~~~e~~~~~~~~k~~l~~~ 80 (393)
T d1xlma_ 1 VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT 80 (393)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99984456417886146678899898878899999999999981998880352334888998788999999999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Gl~l~~~t~nlf~~p~~~~Ga~tnPD~~VR~~Ai~~~k~~idia~~LGa~~~v~W~G~~G~~~~~~~d~~~~~~~l~e~l 160 (393)
T d1xlma_ 81 GLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGV 160 (393)
T ss_dssp TCEEEEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98110223664334355437756959999999999999999999996898499736888677777658999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~~~a~~~g~~~~~~IEpKP~EP~~~~~~~~~~~~l~fl~~~~~~~~~gvnlD~gH~~lag~~~~~~va~a~~~gkLg 240 (393)
T d1xlma_ 161 DTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLF 240 (393)
T ss_dssp HHHHHHHHHHTCSCEEEECCCSCSSSSEESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCE
T ss_conf 99999898629885698611677775554037599999999980894204575204524441577078898998669730
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~vh~Nd~~~~~~D~Dl~~gs~~~~~~~~~~~~l~~g~~~g~~~y~G~~~fD~~~~r~~~~e~~~~~~~~~~~~~~~l~~~ 320 (393)
T d1xlma_ 241 HIDLNGQRGIKYEQELVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKER 320 (393)
T ss_dssp CCEECBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 24426787666666677885469999999999953664678787775588722667887306999999999999999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 A~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~e~L~q~~~~~l~g~~ 393 (393)
T d1xlma_ 321 ALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR 393 (393)
T ss_dssp HHHHHHCHHHHHHHHHHTTTGGGSCSSCTTCCHHHHHTCGGGTTTCCHHHHTTCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9997519999999986565021045543899889999788753699845552232689999999999970489
|
| >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cytidine deaminase-like superfamily: Cytidine deaminase-like family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC domain: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29652.36 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 g~~~~~LRYGENPHQ~aA~~~~~~~~~~~~~l~gk~SyNN~lD~daA~~lv~ef~~~~~~Pa~vIiKH~NPCGvAi~~~~ 80 (393)
T d1g8ma2 1 GVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPL 80 (393)
T ss_dssp TTTEEEESCSSSTTSCCEEEECSSSSCSEEEEESCCCHHHHHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCC
T ss_conf 99879887976805411386216874316886687027679889999999997465059976999768883366508551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~e~~~~~~~~~~~~~~~~~l~~Ay~~A~~~DP~SAFGGIIa~N~~vd~~~A~~i~~~F~EvIIAP~f~~eAleiL~~KKN 160 (393)
T d1g8ma2 81 SEEEAQVCMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 160 (393)
T ss_dssp CHHHHHHTTCTTTGGGCCHHHHHHHHHHHSCTTTTTTEEEEESSCBCHHHHHHHHTSCEEEEEESCBCHHHHHHHHHGGG
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCC
T ss_conf 02332000012211346629999999871485100050788615533210243222020100113455677888742545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lRll~~~~~~~~~~~~~~~r~i~gg~L~Q~~d~~~~~~~~~~~v~~~~~~pt~~e~~dL~FAwkVvK~vKSNAIvlak~~ 240 (393)
T d1g8ma2 161 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 240 (393)
T ss_dssp GTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETT
T ss_pred CCHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 21343024644577666367750531110123332455551343202345168899999999999862366458996298
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l 320 (393)
T d1g8ma2 241 QVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQL 320 (393)
T ss_dssp EEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf 68831899765478999999999887764063011000000134555541677651354332035566655420143112
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~g~vlASDAFFPF~D~ie~aa~~Gv~aIiQPGGSirD~evI~aan~~~i~M~fTg~RhF~H 393 (393)
T d1g8ma2 321 TEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 393 (393)
T ss_dssp CHHHHHHHHTTCCCEEEEESSCCSSTHHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 3788764430357857980268687568999998599399879874251999999998598899878867288
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29651.95 Aligned_cols=1 Identities=0% Similarity=-1.690 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~ 80 (393)
T d1kwga2 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWL 80 (393)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 94763584549999999999999982999899555346531888992687999999999998799999976777775343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1kwga2 81 VDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFR 160 (393)
T ss_dssp HHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 21486501245778504666666667799999999999999998771688537887403555655775443167777778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T d1kwga2 161 GWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTH 240 (393)
T ss_dssp HHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88887665299999876530022223676545676555555662565899998777677787889875421465555435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 320 (393)
T d1kwga2 241 NFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRGVGRGRFWVMEQQPGPVNW 320 (393)
T ss_dssp EECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred CCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 55566656423331256652121355555445566784223444446881688999999997347987036513666666
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~aia~G~~~~gy~~W~~~~~~~E~~~~gL~~~d~~p~~~~~~~~~~~~~l~~~~~~ 393 (393)
T d1kwga2 321 APHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQAPFAQEQMHAGLHRPDSAPDQGFFEAKRVAEELAALALP 393 (393)
T ss_dssp SSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBCCSSSTTTTSCCSBCTTSCBCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6468889867999999999977998889857557889750010014078899578999999999999974499
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29648.63 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 1 KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 91582452087636712799996999999979996998789878877654046765420477167666750015799876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999489919999822898205651245632431157896689998447886542179998389819998740477534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 10233103200014510002578986789997899989999389829998602332110000111112425638770046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCC
T ss_conf 65320112428988421001035321344431156666431023202358666001389888069877999899999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~~g 393 (393)
T d1sq9a_ 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393 (393)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEECCC
T ss_conf 9799999886876137734899999999999831246998866766312368899799999199089990899
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29650.89 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
=
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH
T ss_conf 99899989984899999999997859899994677542211012111343321577887777622797079983078999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999975110120012342101232222222222333223354078999998431242011012111223356643233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 32222235555542135455777775310012111223310233310123112777654555542223555445655300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCE
T ss_conf 15667764497268852012223455333337789998874034330466437898067999999999998761987524
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T d1i24a_ 321 MTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMT 393 (393)
T ss_dssp EEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTCCSSCCCC-
T ss_pred EECCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf 5646899889866763789999974994056999999999999999887501764588888750011224669
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29648.06 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~f~w~~~~~~~~~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt 80 (393)
T d1hvxa2 1 AAPFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGT 80 (393)
T ss_dssp CCCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCC
T ss_pred CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98988648996750668889709999997899997499989979888688889989886676555545556776878899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~df~~LV~~aH~~GIkVIlDvV~NHt~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1hvxa2 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYH 160 (393)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999987998999984355446677542110134764334455787444455556777777778776655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~giDGfR~D~a~~i~ 240 (393)
T d1hvxa2 161 FDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIK 240 (393)
T ss_dssp EEEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 78776556677676433268757556555554300101453300557737777788899998876388615642245578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~f~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T d1hvxa2 241 FSFFPDWLSYVRSQTGKPLFTVGEYWSYDINKLHNYIMKTNGTMSLFDAPLHNKFYTASKSGGTFDMRTLMTNTLMKDQP 320 (393)
T ss_dssp TTHHHHHHHHHHHHHCCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66799999999874477623551002763777777764045655003089999999987038779999999753423784
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~v~fl~NHD~~r~~~~~~~~~~~~~~~a~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~~~~i~~~~~~rk~ 393 (393)
T d1hvxa2 321 TLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARRD 393 (393)
T ss_dssp GGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 3186877578785513444587999999999999982899389883672299996999707786999997179
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=100.00 E-value=0 Score=29647.38 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~d 80 (393)
T d1e43a2 1 VNGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSE 80 (393)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97617886766778889899999997899997599989969572689888999786567665434456766888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 f~~Lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1e43a2 81 LQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDG 160 (393)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999986998999870025557775444442235741113566654555344555667778877666555444788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~~~~~~~f 240 (393)
T d1e43a2 161 ADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSF 240 (393)
T ss_dssp ESCBTTTTBCCEEEECSSSCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 87666677677322157645555556555540202332311437714567799998766543486537861345689799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (393)
T d1e43a2 241 LRDWVQAVRQATGKEMFTVAEYWQNNAGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRKLLNGTVVSKHPLKS 320 (393)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCSTTTCGGGE
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 99999999874286057766533773776641222044430454117799999877216648899998515111680402
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------------C 112 (807)
=
T Consensus 321 v~fl~nHD~~R~~~~~~~~~~~~~~la~a~ll~~~pG~P~IyyGdE~G~~g~~~~~~~~~~~~i~~l~~~rk~ 393 (393)
T d1e43a2 321 VTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQ 393 (393)
T ss_dssp EEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCCCCSSTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5755178773413356763479999999999982899479871573299998998867789999999998684
|
| >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=29584.19 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~g~~T~~vH~G~~~~~~~g~v~pPI~~ssT~~f~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEg~~~a~~~ 80 (392)
T d1gc0a_ 1 LPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 80 (392)
T ss_dssp CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHCEECCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEH
T ss_conf 94812020548988877899950882288887518889999862688688523289886899999999998399511101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v 160 (392)
T d1gc0a_ 81 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHM 160 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEE
T ss_conf 44789999998752369980001211110145564321024774224578667999998478787599964666321354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~ 240 (392)
T d1gc0a_ 161 ADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV 240 (392)
T ss_dssp CCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 24399999998459879983672574505867848988998665203598554431024306789898899999703886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~p~da~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~~~~~~~ 320 (392)
T d1gc0a_ 241 LSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGR 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHH
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88045799982206089999999999999999997399865786524458865332133456778379999959999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~~AL~aa~ 392 (392)
T d1gc0a_ 321 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKASA 392 (392)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 999858846671246876850108622264228999999759792969998601899999999999999629
|
| >d2d0ta1 a.266.1.2 (A:12-403) Indoleamine 2,3-dioxygenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Indoleamine 2,3-dioxygenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29579.12 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~f~vs~~~GFLp~~Pl~~LP~~y~~w~~i~~~lp~Ll~~~~lr~~V~~LP~l~~~~l~~~~~~r~a~~~lsfla~aYi 80 (392)
T d2d0ta1 1 SKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYV 80 (392)
T ss_dssp CCSSSCBTTTBTSCSSCCCCCCGGGHHHHHHHHTHHHHHHTTCHHHHHHHCCCCCSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 97334087768899984565786327999999987887755809999984786784433896999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 w~~~~~~~~~~LP~~Ia~Pl~~vs~~Lg~pP~ltYa~~~L~Nw~~~dp~~~~~~dNl~~i~~F~g~~dE~~F~lv~v~iE 160 (392)
T d2d0ta1 81 WGKGHGDVRKVLPRNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVE 160 (392)
T ss_dssp HTTSSSCCCSEECHHHHHHHHHHHHHHTCCSSCCHHHHTTSSEEESSTTSCSCGGGEEESCCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 07899977778987888999999997499986516556310310058778887330556402789974135789879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~l~~~~~~~~a~~~~d~~~~~~~l~~i~~~i~~i~~~~~~m~e~~~p~~fy~~~R~fi~G~k~~~~~p~GviYeg 240 (392)
T d2d0ta1 161 IAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGNPQLSDGLVYEG 240 (392)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCHHHHHHTHHHHTCCBSSCGGGTTCBEETT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCEECC
T ss_conf 86446999999999998767758799999999999999999998502029855621423545322437776888730036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~p~~~~G~SgaQSsii~~lD~~LGv~h~~~~~~l~~~L~~mR~YmP~~HR~Fl~~l~~~~~ir~~v~~~~~~~L~~a 320 (392)
T d2d0ta1 241 FWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFVLSKGDAGLREA 320 (392)
T ss_dssp TCSSCBCBCCCCGGGCHHHHHHHHHTTCCSSCSSSHHHHHHHHHGGGSCHHHHHHHHHHHTSCCHHHHHHTTCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf 77776426788766664089999995785668875088999999985739999999999840436788870588899999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------C 112 (807)
-
T Consensus 321 y~~~v~~l~~FR~~H~~~v~~YIi~~~~~~~~~~~~~~~~~~~~~~gTGGT~~~~fLk~~rd~t~~~~~~~~ 392 (392)
T d2d0ta1 321 YDACVKALVSLRSYHLQIVTKYILIPASQQPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHTC-------------------CTHHHHHHHHHHHHHHHHTCSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999886641223678888888888217885488999997767887761389
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=29576.26 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E 80 (392)
T d2pula1 1 KTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIE 80 (392)
T ss_dssp CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHH
T ss_conf 99877269989999999984998988873699807985276899995799848999617713034677788877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~ 160 (392)
T d2pula1 81 SSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 160 (392)
T ss_dssp HHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
T ss_conf 99999865057988552899859887798713577653022201542128999999999999998735033442111012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~ 240 (392)
T d2pula1 161 VKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEH 240 (392)
T ss_dssp HHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSS
T ss_pred CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCC
T ss_conf 33446578887777640104788988741065455778765520789999999874323688600335776784667599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~vID~E~a~~G~~~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T d2pula1 241 ETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLS 320 (392)
T ss_dssp CEEECCCTTCEEECTHHHHHHHHHHHHHHHHHSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTSTTHHHHHHH
T ss_pred CEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 30895226522287899999999999999740663034568999999999999999999876165500034899999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~d~~~~~g~~~~rr~~g~a~~~d~~~i~~~~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 392 (392)
T d2pula1 321 HIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCCHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 999999998889999987341444421315798889999999999999999615512999999999999709
|
| >d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Actinoplanes missouriensis [TaxId: 1866]
Probab=100.00 E-value=0 Score=29575.69 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~kfs~g~Wt~~~~g~d~FG~~tr~~~~~~e~~~~l~~lG~~g~~fHd~dl~P~~~~~~~~~~~~~~~k~~l~~t 80 (392)
T d1xima_ 1 VQATREDKFSFGLWTVGWQARDAFGDATRTALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET 80 (392)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99986673579960366768799998877754799999999985998686067877888998788999999999999863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Gl~~~~~t~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLGa~~~v~W~G~~G~~~~~~~d~~~~~~~~~e~l 160 (392)
T d1xima_ 81 GLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREAL 160 (392)
T ss_dssp TCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98234663342447143158877939999999999999999999995898379637877667876558999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~al~~i~~vg~p~~vgvnlD~gH~~~ag~~~~~~ia~a~~~gkL~ 240 (392)
T d1xima_ 161 NLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHAIAFVQELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKLF 240 (392)
T ss_dssp HHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHCCCEE
T ss_conf 99999887508885598603778887543407799999999971990036674113245433798579999998659789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 hvHlND~~~~~~D~DL~~Gs~~~~~~~~l~~~l~~g~~g~~~~~G~~~fD~~~~r~~~~~~~~~~~~~~~~~~~~l~~~a 320 (392)
T d1xima_ 241 HIDLNGQHGPKFDQDLVFGHGDLLNAFSLVDLLENGPDGAPAYDGPRHFDYKPSRTEDYDGVWESAKANIRMYLLLKERA 320 (392)
T ss_dssp CCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHSCGGGSCSCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99748998989888988898788899999999984777776777875402587677871069999999999999999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~l~~d~~~~~al~a~~~~~~~~~tl~~~~~~~~~~a~~~~~~~~~~~~~~~rg~~~~~l~q~~~~~l~~~~ 392 (392)
T d1xima_ 321 KAFRADPEVQEALAASKVAELKTPTLNPGEGYAELLADRSAFEDYDADAVGAKGFGFVKLNQLAIEHLLGAR 392 (392)
T ss_dssp HHHHHCHHHHHHHHHTTSGGGGSCSSCTTCCHHHHHHCGGGTTTCCHHHHHTSCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 998778788999998665663376556564468998767533346877786534369999999999972689
|
| >d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: PIWI domain domain: Argonaute homologue Aq 1447 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29574.46 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~f~~~l~~~~~~~G~~~~~~~~~~ 80 (392)
T d1yvua2 1 KLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSL 80 (392)
T ss_dssp ECCCCCCEECSSCCEECCSSCCHHHHHHCCCCCSCSEEEEEEEEEEC-----CHHHHHHHHHHHHHHTTTCEEEEEEEEE
T ss_pred CCCCHHHEECCCCCCCEEEECCEEHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCE
T ss_conf 92110210135899742223320224324732356634424789999631066799999999999986292645788671
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~Y~~IK~~~~~~gIptQ~i~~~tl~~~~~~~~~~NIa 160 (392)
T d1yvua2 81 ILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVA 160 (392)
T ss_dssp EECSSTTHHHHHHHHHHTTTSSCSEEEEEEC----------CHHHHHHHHHHHHTTCCCEEEEHHHHHHSCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCHHHHHHHH
T ss_conf 31277511599999998402677789999768888665554047999999985499664898866616898358999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lqinaKlGGipw~l~~~~~~~tmiIGiDv~h~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ee~~~~~~~~~l~~ 240 (392)
T d1yvua2 161 EQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSL 240 (392)
T ss_dssp HHHHHHTTCCSCEESCCTTCCSEEEEECEEECCCSSSCCCEEEEEEEECTTSCEEEEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999849834688788999759999998715888984638999999868997789998854776078999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~P~rIIi~RdG~~~~~El~~i~~a~~~~~pki~~IvV~Krh~~Rff~~~~~~~Gt~v~~~~~~~~~~~s~~~~ 320 (392)
T d1yvua2 241 LEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVY 320 (392)
T ss_dssp HHHTTCCTTCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEEECSSCCCEECSCSCCTTEEEEBSSSEEEECCSCCCS
T ss_pred HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCC
T ss_conf 99964999866999958877379999999999864995899999815882656789999998771798929999768857
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------------C 112 (807)
-
T Consensus 321 qGT~rP~~Y~vl~d~~~~d~l~~lt~~Lc~l~~~~t~svslPapi~YA~~lA~~~r~~~~p~~~~~~~~~~l 392 (392)
T d1yvua2 321 EGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL 392 (392)
T ss_dssp TTCCCCEEEEEEECSSCHHHHHHHHHHGGGGGCCSSSCCCSCTTTTTHHHHHHHHHTCSSCCEEEESCCTTC
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 877788589998898998999999999775126718998007799999999999751178654575524219
|
| >d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29504.00 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~~T~~vh~g~~~~~~~g~v~pPi~~sst~~f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~~~a~~~~ 80 (391)
T d1cl1a_ 1 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 80 (391)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 91400360898999889984498548885362898999987527766866767899865999999999981995279851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~ 160 (391)
T d1cl1a_ 81 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 160 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGTCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 50001110222046778769983355520133322011233333200267311122233345553355303576532112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~ 240 (391)
T d1cl1a_ 161 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMV 240 (391)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCC
T ss_conf 32789998874157827998534332322111353340677623100036653334420003543210001111001357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~p~~a~ll~rgl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~e~~ 320 (391)
T d1cl1a_ 241 DADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEEL 320 (391)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
T ss_conf 85120244435316788999999999999988874465433333222204568988630589876402453388899999
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~f~d~L~l~~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVGlEd~eDLi~Dl~~AL~~i~ 391 (391)
T d1cl1a_ 321 ANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV 391 (391)
T ss_dssp HHHHTTCSSCBCCSCCCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 99997499265856778876533478222343579247659996979999561999999999999999669
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29498.00 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 97999858873689999999999998899899997803676898779848987836877734856666999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~l~~~~~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1pn3a_ 81 EWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASI 160 (391)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999730798478734471378999999980876488531224455312220056788999888778899999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 240 (391)
T d1pn3a_ 161 GLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAA 240 (391)
T ss_dssp SCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHTTSSSCCEEEECTTCCSTHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
T ss_conf 37663200024566640231542431157777771565686567655677888642115897278722431223278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~ 320 (391)
T d1pn3a_ 241 KMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVV 320 (391)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHHTTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTT
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 99999998569779994364333445688988995446879998425489852743799999982886899335567745
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l~~~~ 391 (391)
T d1pn3a_ 321 EQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAVSLEK 391 (391)
T ss_dssp BCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 29999999998798897685789999999999998399999999999999885279999999999987459
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=0 Score=29497.09 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLae~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~ 80 (391)
T d1gpea1 1 YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTT 80 (391)
T ss_dssp CCCCCCCCCGGGSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCC
T ss_conf 98600145554112791212699664999896789999999998787982999837889888873040888998860897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~dw~~~t~p~~~~r~~~~~~G~~lGGsS~in~~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~ 160 (391)
T d1gpea1 81 VDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAA 160 (391)
T ss_dssp TBCCEECCCCTTSCCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHH
T ss_pred CCCCCEEEECCCCCEEEECEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC
T ss_conf 66683413567995741121112576551430378603522334410037998644320378888765315886011035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~~~~~g~~~~~~~~~~~~~~~~~r~s~a~~~~~p~ 240 (391)
T d1gpea1 161 GHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN 240 (391)
T ss_dssp TCCCCGGGCCBSSSEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCC
T ss_conf 66766445678886432445565545789999999887548721201225765432222211320333442122025763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~r~nl~i~t~a~V~rIl~~~~~~g~ra~GV~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~ 320 (391)
T d1gpea1 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQ 320 (391)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCC
T ss_pred CCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCHHHHHHCCCCE
T ss_conf 22013443305325688650788874688658833897278998488799926120466899866797388998779988
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
-
T Consensus 321 v~dlP~Gvg~nl~dh~~~~v~~~~~v~~~~~l~~~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (391)
T d1gpea1 321 LLDLPVGICSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKSA 391 (391)
T ss_dssp SEECCTTCTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99897541215346766555034345477774331245686220432234443557666689998761249
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29496.08 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~vP~g~~L~~V~vl~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~~g~LT~~G~~q~~~lG~~lr~~Y~~~~~l~~~~~~ 80 (391)
T d1nt4a_ 1 QTVPEGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP 80 (391)
T ss_dssp CCCCTTEEEEEEEEEECCCCBCCCGGGHHHHHHTCSSCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99899998849999973867999988775313477344778999856110889999999999999998760677787778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~v~vrst~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1nt4a_ 81 PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQ 160 (391)
T ss_dssp CTTSEEEEECSSHHHHHHHHHHHHHHSTTSCCCEECCSCCSSCCTTTCCCCCCCCSHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 70005886178719999999999972788777756443457777666775456652106788787764310243139999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1nt4a_ 161 LLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL 240 (391)
T ss_dssp HHHHHHTGGGSTTTTTTCCCCTTTCCCEEECCTTSCCEEESHHHHHHHHHHHHHHHHHTTCCTTTGGGGTSCSTTHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997633022144555555688888888875324766675077776599999999984899997434676769999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~~~k~~l~s~HD~ti~~~l~aLgl~~~~~p~~~~~~p~~s~~ 320 (391)
T d1nt4a_ 241 SKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKI 320 (391)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHTTTTTTTSCSEEEEECCHHHHHHHHHHTTBCCCCCTTCSSSSCTTCEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999986287688764022899999999873589886279997156689999998389866788877888976638
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~fEl~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~lCpl~~F~~~~~~~i~ 391 (391)
T d1nt4a_ 321 VFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK 391 (391)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCHHHHHHTCCCCSSSCCEEEECCBTTBCCCTTSCEEHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCCEEEEEEECCCCHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99998617888755999986376132035665430103774156479988999996689999999999739
|
| >d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cysteine desulfurase IscS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29495.89 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~iYlD~aa~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~ 80 (391)
T d1p3wa_ 1 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 80 (391)
T ss_dssp CCSEECBTTTCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 97498537422679999999999999864665787316659999999999999999999739997819997988999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~ 160 (391)
T d1p3wa_ 81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ 160 (391)
T ss_dssp HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCEEEC
T ss_conf 99642353057998899924654138999999997598899967887872768999975799948999978978881077
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~ 240 (391)
T d1p3wa_ 161 DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRS 240 (391)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTSC
T ss_pred CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCC
T ss_conf 78999998555895799730122577564202104653212231005788559999855021156875468856667515
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 320 (391)
T d1p3wa_ 241 GTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLA 320 (391)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSCHHHHHHHTTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCE
T ss_conf 74023334453000467887766789999999999999877624806502444567518999857877699999718977
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~~~~~~~~~~~ 391 (391)
T d1p3wa_ 321 VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ 391 (391)
T ss_dssp CBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHCC
T ss_pred EECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
T ss_conf 98262003776540599997399810069889996678899999999999999999999973967786329
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29494.12 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~v~Yei~~~~F~d~~~dg~Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h 80 (391)
T d1lwha2 1 MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFH 80 (391)
T ss_dssp CCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97999815610588999860999999855999975999899797987999999785577874712399999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~ 160 (391)
T d1lwha2 81 DSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYD 160 (391)
T ss_dssp HTTCEEEEEECTTBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCTT
T ss_pred HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 35987844331013334444433223677655664200377545676546788754333677751236668867753433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 n~~v~~~i~~~~~~w~e~gvDGfR~Daa~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1lwha2 161 NPQVFDEMKRLVLHLLDMGVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLKGIFLAEIWAEARMVDEHGRIFGYMLNFDTS 240 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEETTGGGSSSSHHHHHHHHHHHHTTCCSEEEECCCSCSSSHHHHHHHHEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCHH
T ss_conf 41146899998888760699700105588877764211588999998765300255411200011034446731134178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~~~~~~~~~~~~~~~~~a~~lllt~pG~P~IyyGdE~G~~~ 320 (391)
T d1lwha2 241 HCIKEAVWKENTRVLIESIERAVIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIKLSISILFTLPGVPLVFYGDELGMKG 320 (391)
T ss_dssp HHHHHHHHHTCTHHHHHHHHHHTSSCSSEEEEESCCTTSCCGGGGGGCCCHHHHHHHHHHHTTSSSEEEEETTGGGTCCC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCC
T ss_conf 89999874034899999998631467765000001555543334123201567999999862689987886143027768
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~r~pm~W~~~~~~~~~~~~~~~~~~~~~~~~nve~q~~~~~s~~~~~~~Li~lRk~~~al~r 391 (391)
T d1lwha2 321 VYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSHTLGWTRFRKENQWIDR 391 (391)
T ss_dssp CCCSSCGGGGSCCCCSSTTSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHHHHHHHHHHHTCGGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 98899865311888878777788888887867897423117999875816899999999999813856239
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=100.00 E-value=0 Score=29434.02 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 GgiDtHvHfi~Pqq~~~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eq 80 (390)
T d4ubpc2 1 GGIDTHVHFINPDQVDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQ 80 (390)
T ss_dssp CEEEEEEECCCTTHHHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 98220003348878999985697366468557777878745689888999999865527823115232666986799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~aGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfve~T~~a~~gRtiH~~HtEGaGGGHaPDii~~~ 160 (390)
T d4ubpc2 81 IDAGAAGLKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMA 160 (390)
T ss_dssp HHHTCCEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGG
T ss_pred HHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC
T ss_conf 98655005013113647789999999864059268985387510101165899867962111467888889883268763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~nvLpsSTnPT~Pyt~nt~~EhldM~MvcHhL~~~ipeDvafAesRiR~eTiaAEdvLHD~GaiSi~sSDsQaMGRvg 240 (390)
T d4ubpc2 161 GHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAG 240 (390)
T ss_dssp GSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 77865578999887886672666367377641479888026777763033012326777652486444136753246400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Evi~Rtwq~A~kmk~qrG~l~~d~~~~DN~RvkRYiAKyTINPAIahGish~VGSvE~GKlADG~a~~~tsvtFVSqaAi 320 (390)
T d4ubpc2 241 EMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADGDLIHDTNITFMSKSSI 320 (390)
T ss_dssp CHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCTTHHHHSCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
T ss_conf 67776778898877751489875566777013202530246806750741125764678434876345764899858887
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
-
T Consensus 321 d~Gi~e~LGL~k~l~pVkn~R~ItKkDMk~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 390 (390)
T d4ubpc2 321 QQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKELPMAQRYFLF 390 (390)
T ss_dssp HTTHHHHHTCCSEEEECCCCSSCCGGGSTTCCCCCCCEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred HCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCCCHHCCCCC
T ss_conf 5777677088644886058887786785015789983689986689889999046876756630120177
|
| >d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29429.18 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 mktl~d~~~~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~~~~~Sl~~v~~~l~~~ 80 (390)
T d1v6sa_ 1 MRTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPKYSLAPVGEALRAH 80 (390)
T ss_dssp CCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCSSCCGGGCSHHHHHHHHHH
T ss_pred CCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97412258789999999403777559908976899999999999997899899995589999989761379999999752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~~v~~~~~~~~~~~~~~~~~l~~g~i~lLENvRF~~~E~~nd~~f~~~La~l~DiyVNDAF~~aHR~haS~vgi~~~l 160 (390)
T d1v6sa_ 81 LPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL 160 (390)
T ss_dssp CTTEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTTCHHHHHHHGGGCSEEEECCGGGTTSCCCCCCCGGGTS
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCHHHH
T ss_conf 46532653101122122222346665378651123245521165277776652476589631466665056622501333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ps~aG~l~ekEi~~L~~~l~~~~rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~~~ 240 (390)
T d1v6sa_ 161 PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRL 240 (390)
T ss_dssp CEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 45668999999999999985446750899834640236999999997525666644177999997597668634431146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~a~~~~~~i~lp~dv~~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmGvfE 320 (390)
T d1v6sa_ 241 DLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFE 320 (390)
T ss_dssp HHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 66676777654302333333211220123677532356433310024432000134677887750264489975644502
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~F~~GT~~i~~aia~~~~a~sIiGGGdT~aai~~~g~~~~fshVSTGGGA~Le~L~G~~LPgi~aL~~ 390 (390)
T d1v6sa_ 321 VPPFDEGTLAVGQAIAALEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG 390 (390)
T ss_dssp STTTTHHHHHHHHHHHTCSSCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHHSCCHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHCC
T ss_conf 5743079999999998558997999488999999974986787179577899999977999642143159
|
| >d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus, different strains [TaxId: 11520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza B virus, different strains [TaxId: 11520]
Probab=100.00 E-value=0 Score=29428.62 Aligned_cols=1 Identities=100% Similarity=0.702 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~r~ge~~~n~~~lVtREPyVSC~p~eC~~FaL~QGt~l~~kHSNgTi~DRsp~RtL 80 (390)
T d1nsca_ 1 EPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHL 80 (390)
T ss_dssp CCCCCCCCCBCSCSSEEEEEEECGGGGCCTTSCCCBEEEEEEEEEECSSCEEEEEEEEEEESSSSCCTTTTCSCCSSCEE
T ss_pred CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEE
T ss_conf 97554451210452123420227210254446674069727601018430145862054111686668841456411201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~s~~lG~~P~~~ns~f~~vaWSsssCHDGk~wl~i~vtG~d~nA~A~~~Y~g~~tdsI~SW~~nILRTQESeCvCinG~C 160 (390)
T d1nsca_ 81 ISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDC 160 (390)
T ss_dssp EEEETTSCCBTTTCEEEEECSEEEEEECSSCEEEEEEESCGGGCEEEEEETTEEEEEEECSSSSCCEECSSCCEEETTEE
T ss_pred EECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 22326799965663379987652433688724899878698872899998999964055334310200432048989989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~vvMTDGpA~~~A~~ki~~i~eGkIi~~~~l~g~~~HiEECSC~Yp~~~~V~CVCRDNW~GsNRPvv~in~~~~s~~~gY 240 (390)
T d1nsca_ 161 YLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL 240 (390)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTEEEEEECCEESCSBCEEEEEEESSSSEEEEEEECSSSCSSCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 99992688778542589998456288776058886724752115899881699970788888998499545534145315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 vCSGl~~DTPR~~D~s~tg~C~~n~~~G~~GVKGgf~~~~~~~~~~vW~GRTiS~~SRSGfE~~kV~~gw~~~~s~~~~~ 320 (390)
T d1nsca_ 241 MCTETYLDTPRPDDGSITGPCESNGDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVRYDGDPWTDSDALAH 320 (390)
T ss_dssp CCCSSCCSSSCCCTTCCCSSTTCCCSCCSSCCCCCEEEEECSSCEEEEEEECSSSSSSEEEEEEEEESSCTTTCCCCCEE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE
T ss_conf 85366578999888887767888876888863565011012468874764420476667507999778987768620005
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~q~iV~~~n~sgYSg~F~~~~k~C~~pCF~VElIRGrp~e~WTSnS~vvfCg~~s~~~~wswpDGA~i~l 390 (390)
T d1nsca_ 321 SGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL 390 (390)
T ss_dssp EEEEEEEEEECCCEEEEEEECSSSEEEEEEEEEEECCCTTSCCEEEEEEEEECSSSCCCCCCCCCCCTTC
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 7899953788862178998589853022899997288766501375699972589977866998656689
|
| >d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29425.58 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~g~~gg~~~pe~l~~~~~~l~~~~~~~~~~~~f~~e~~~~~~~~~grpTPL~~~~~Ls~~lg~~IylK~E~ln 80 (390)
T d1qopb_ 1 TTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLL 80 (390)
T ss_dssp CCSSCCEETTEEEEESCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGS
T ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEHHHHHHHHCCEEEEEEECCC
T ss_conf 98777865683999687888999999999999997397899999999874489996553758654535977999971487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ptGS~K~R~a~~~i~~A~~~G~~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~ 160 (390)
T d1qopb_ 81 HGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS 160 (390)
T ss_dssp TTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf 44656604899999987543873023103477899999999985367459963320011235888999865966999527
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~ 240 (390)
T d1qopb_ 161 GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 240 (390)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEE
T ss_conf 85136676999999976333555530343234334654110156655012389999970986306886235410111100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~f~~~~~~~~ig~ep~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~~~~s~a~gl~~~~~~~~~~~l~~~g~ 320 (390)
T d1qopb_ 241 ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGR 320 (390)
T ss_dssp GGGTTCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTS
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 11004663248613566356565444551035744554112454113688864443222455334662067899986286
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~vtD~Ea~~a~~~La~~EGI~~a~Esa~Ava~Ai~~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l 390 (390)
T d1qopb_ 321 ADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (390)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHC
T ss_conf 3999999999999999999966984168269999999998635579998899997889734799999639
|
| >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Hypothetical oxidoreductase yqhD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29421.49 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~m~~f~f~~P~~I~fG~g~l~~l~~~~~~~~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~ 80 (390)
T d1oj7a_ 1 KAGLNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNA 80 (390)
T ss_dssp CBCCCCEEEEEEEEEEESTTGGGGHHHHSCTTCEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHH
T ss_pred CCCCCCCEEECCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99888808748986898569999999998679988999897168774399999997189947999282379999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagtgse~t~~avi~~~~~ 160 (390)
T d1oj7a_ 81 VKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTT 160 (390)
T ss_dssp HHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEEEEEETTT
T ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99976337877985478854408999999751874300344312466433467873335665443111243101124443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~k~~~~~~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~~a~~~~~~~~~~l~~a~~~~~d 240 (390)
T d1oj7a_ 161 GDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPEN 240 (390)
T ss_dssp TEEEEEECGGGSCSEEEECGGGGTTCCHHHHHHHHHHHHHHHHHHHSSSCBCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCEECCCHHHCCCCEEEEHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC
T ss_conf 11000110000145046514430369744430322558888889871775321230367765555530134777760446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~ar~~l~~as~~a~~~~~~~g~~~~g~~Hal~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~ 320 (390)
T d1oj7a_ 241 YDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEG 320 (390)
T ss_dssp HHHHHHHHHHHHHHSSSTTTTTSCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999888888998865540486666531344334310268765311233221332001111599999999995485469
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~e~~~~~i~~i~~~~~~lglP~~L~e~Gv~~~~i~~la~~~~~~~~~~~~np~~l~~d~i~~il~~A~ 390 (390)
T d1oj7a_ 321 SDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR 390 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCCSGGGGTCCSTTHHHHHHHHHHTTCSSBTTTTCBCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 9699999999999999998498999899199999999999999863555309997899999999999509
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29422.55 Aligned_cols=1 Identities=0% Similarity=0.305 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~ 80 (390)
T d1ud2a2 1 DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK 80 (390)
T ss_dssp CCCCCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99777699844057788897799999979999976998899697803888889998866774445554457768889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~efk~lV~~~H~~GI~VilDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (390)
T d1ud2a2 81 AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF 160 (390)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998558813898714554676630344420268654332345543445554556776677678776543445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~dg~r~D~~~~~~~~~ 240 (390)
T d1ud2a2 161 NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY 240 (390)
T ss_dssp EEEEEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCHHH
T ss_conf 78876655777751211687655555422222222334410004889999988765301210124653334320067677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
T d1ud2a2 241 TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA 320 (390)
T ss_dssp HHHHHHHHHHHCSSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTTTTCHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 88888887643202103411124786110101245432333203678889999875134469999987533033783326
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------------C 112 (807)
-
T Consensus 321 v~fl~nHD~~r~~~~~~~~~~~~~~~~~~~il~~~pG~P~iy~GdE~G~~~~~~~~~~d~i~~l~~~R~~ 390 (390)
T d1ud2a2 321 VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQN 390 (390)
T ss_dssp EECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 8870277665400013675789999999999985799849974265097998985126888999997389
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=29357.12 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (389)
T d1e9yb2 1 GIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQI 80 (389)
T ss_dssp EEEEEEETTCTTHHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999856870774586588877776552797608999998600377253662116779837899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~aGa~GlKiHEDwGatp~~Id~~L~vad~~dvqv~iHtDtlNE~Gfve~T~~a~~gRtiH~~HtEGaGGGHAPDii~~~~ 160 (389)
T d1e9yb2 81 EAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAG 160 (389)
T ss_dssp HTTCSEEEECGGGCCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGG
T ss_pred HHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCC
T ss_conf 72303220231026787888899998775095389438976654303648998679752003137777777617888705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~nvLpsSTnPT~Pyt~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTIaAEdvLhD~GaiSi~sSDsqaMGRvgE 240 (389)
T d1e9yb2 161 EHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGE 240 (389)
T ss_dssp STTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf 77766788999878666628886345241034798980267777630330223367776336854531366644443677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 vi~RtwQtA~kmk~~rG~l~~d~~~~DN~RvkRYiAKYTINPAIahGis~~VGSvE~GK~a~G~A~~~tSvtFVSqaAid 320 (389)
T d1e9yb2 241 VITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVHHGKAKYDANITFVSQAAYD 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBGSTTHHHHHCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
T ss_conf 89999998999998863687667776427777666650568577558211048625366135867665635886688875
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~Gi~~~LGL~K~l~pVkn~R~ItK~DM~~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 389 (389)
T d1e9yb2 321 KGIKEELGLERQVLPVKNCRNVTKKDMQFNNTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF 389 (389)
T ss_dssp TTHHHHTTCCSEEEECCCCSSCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred CCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 787677387752786138887887785115789982689997689889999135765657630110177
|
| >d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Dehydroquinate synthase, DHQS domain: Dehydroquinate synthase, DHQS species: Aspergillus nidulans [TaxId: 162425]
Probab=100.00 E-value=0 Score=29346.41 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 p~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ivtD~~v~~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~~gE~~ 80 (389)
T d1sg6a_ 1 PTKISILGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVS 80 (389)
T ss_dssp CEEEEETTEEEEEEETTHHHHTHHHHHHHHSCCSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGG
T ss_pred CCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf 91688769731898888078775999984179981899978965898999999999870742146762489981698452
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Ks~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~rgi~~i~vPTtlla~~Das~g~k~~in~~~~kn~ 160 (389)
T d1sg6a_ 81 KSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNL 160 (389)
T ss_dssp SSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEECSHHHHHTTTSSCEEEEEETTEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEECCCCCCCE
T ss_conf 89999999999999628876777569996563477889999999855876367314021256653232134211366421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~g~~~~P~~V~iD~~~l~tlP~r~~~aG~~e~ik~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I 240 (389)
T d1sg6a_ 161 IGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARI 240 (389)
T ss_dssp EEEECCCSEEEEEGGGGGTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCCCCTTSCTTGGGHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
T ss_conf 21012045552005554341799998634235553212687888899986999987544201201322104699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~s~~~k~~iv~~d~~e~g~r~~ln~GHt~~HAlE~~~~~~~lHGEaVaiGml~~~~ls~~~g~l~~~~~~~i~~~l~~l 320 (389)
T d1sg6a_ 241 LASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAY 320 (389)
T ss_dssp HHHHHHHHHHHHC-----CGGGGGGTTHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99999863202333443263310135466788887632234568889998899999999993799999999999999986
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------C 112 (807)
-
T Consensus 321 gLPt~l~dl~~~~~~~~~~~~~~~l~~~~~~DKK~~~~~i~~vl~~~iG~~~~~~~~~~~~~~i~~~L~ 389 (389)
T d1sg6a_ 321 GLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVVLA 389 (389)
T ss_dssp TCCCSTTCHHHHHHTTTCCCCHHHHHHHHHTCCE-------ECCEEETTEESSSSCEECCHHHHHHHCC
T ss_pred CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHC
T ss_conf 999654344200013434599999999986378857997899967457767663277599899999739
|
| >d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: AAT homologue TM1698 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29345.67 Aligned_cols=1 Identities=0% Similarity=-1.258 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~ 80 (389)
T d2gb3a1 1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRR 80 (389)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97456348987788899999999976998888989989999889999999850777778899868999999999998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (389)
T d2gb3a1 81 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERT 160 (389)
T ss_dssp SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTE
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 39876552699625543221222112235798688707987433432113686321232222355420245554215674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~ 240 (389)
T d2gb3a1 161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC 240 (389)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 07984798766443210899999984234499999994131002323322222222223443345565334576563132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l 320 (389)
T d2gb3a1 241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL 320 (389)
T ss_dssp EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEC
T ss_conf 51100268998766420122223222222222322320002232333321002344445430463236999558999958
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------C 112 (807)
-
T Consensus 321 p~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a~~~L~~~lk~f~~ 389 (389)
T d2gb3a1 321 PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 389 (389)
T ss_dssp SSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999986006329789994750146888889989999728999999999999999999619
|
| >d1jiha2 e.8.1.7 (A:1-389) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: Lesion bypass DNA polymerase (Y-family), catalytic domain domain: DNA polymerase eta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29344.92 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~vI~hiDmD~FyAsvE~~~~p~l~~~Pv~V~q~~~via~sYeAR~~GVk~gm~~~eA 80 (389)
T d1jiha2 1 MSKFTWKELIQLGSPSKAYESSLACIAHIDMNAFFAQVEQMRCGLSKEDPVVCVQWNSIIAVSYAARKYGISRMDTIQEA 80 (389)
T ss_dssp CCSSBHHHHHGGGCTTTGGGSTTCCEEEEECTTHHHHHHHHHTTCCTTSCEEEEETTEEEEECHHHHTTTCCTTSCHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHCCCCCCCHHHH
T ss_conf 98413645877279752236877679997365089989967563526997799008869998999997199878929999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~k~CP~li~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~Yr~~S~~v~~il~~~~~~vE~~SIDEaflD 160 (389)
T d1jiha2 81 LKKCSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFKSACDLVERASIDEVFLD 160 (389)
T ss_dssp HHHCTTCEEEECCEEETTCSSEECCTTCSTTCSCTTSCCCSSSEEECCHHHHHHHHHHHHHHHHHCSCEEEEETTEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE
T ss_conf 98697636852121234444333344320001331001465326898899999999999999986888057416637897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 240 (389)
T d1jiha2 161 LGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILAL 240 (389)
T ss_dssp CHHHHHHHHHHCCSCBSSSSCBHHHHTHHHHHHHHHCCSCTTSBCCCCCGGGGGCCCCSEECCTTCCCSCCSHHHHHHHH
T ss_pred CCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 50023220355431000122112332212345433332233234456642111222244433433344444356654028
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~~ia~~IR~~I~~etGlt~S~GIa~NK~LAKlAs~~~KPngqtvl~~~~v~~fl~~~~lpi~ki~GIG~k~~kkL~~~l 320 (389)
T d1jiha2 241 GSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELIDVL 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTTCSSCEEECCGGGHHHHHTSSSCCGGGSGGGSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999869984302455289999988744988558667899999997267872020787889999999984
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------C 112 (807)
=
T Consensus 321 gi~t~~di~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~l~Rg~~~~pv~~r 389 (389)
T d1jiha2 321 DLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSR 389 (389)
T ss_dssp TCCSSSHHHHHHHHSCSCHHHHHHHHHHHHTSTTCCTTTCSSCTTCHHHHHHHHHHHTTTCCCCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 897613399987653688999855000655541068776555753244248888644147638888889
|
| >d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: CV3147-like superfamily: CV3147-like family: CV3147-like domain: Hypothetical protein CV3147 species: Chromobacterium violaceum [TaxId: 536]
Probab=100.00 E-value=0 Score=29340.09 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~Ls~~Dl~~i~~Ga~iLGtGGGGdp~~~~~l~~~~~~~~~~~~~~V~li~~del~D~~~V~v~~mGAPtv~~E~~~~~ 80 (389)
T d2o3ia1 1 AFELSPSDLEPLLQGACFFGSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEATDGDCVMVAYMGAPDAINQVQWPN 80 (389)
T ss_dssp CEEECGGGHHHHHHHHHHTTTTCSCCHHHHHHHHTTCSBTTTBSCSCEEEECGGGCCSSEEEEEEEEECHHHHTTCSSCH
T ss_pred CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCEEEEEEEECCHHHHEECCCC
T ss_conf 93757999999851459997278876688999999986642257996699535336888899997640787883405799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~e~~~a~~~l~~~~g~~~~av~~~EiGG~Ns~~pl~~AA~~glPvVDaD~mGRAfPelqm~t~~i~G~~~~P~~lad~ 160 (389)
T d2o3ia1 81 GPVEAALAARQRLESQGRKLAYVVAPESGALGFVVASLVAAKLGLAVVDADGAGRAVPSLPMLTYAAAGVPPTPAFLAGE 160 (389)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHTCEEESBCSSSSCCSSGGGSHHHHTTCCCCSEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHEECCCCCCCEEEECC
T ss_conf 75799999999999719975799951668722789999999719988747875456774322000105899887699728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Gn~~i~~~~~~~~~~~~~e~~~~~~e~~~R~~~~~~~~Gg~~~~a~~pm~~~~~~~~~~I~gTlS~A~~iGrav~~ar~ 240 (389)
T d2o3ia1 161 SGLCVELGVRMPPPDGQRREDISTVVEQMLRPILTNPQFGQFGGLAMWMMSPAQLGGALPVRGTLSRALKLGRALQDGKV 240 (389)
T ss_dssp SSCEEEEEEECCCCC---CCCHHHHHHHHHHHHTTSTTTCSEEEEEEEEECHHHHHHHCCSBSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99779984023555412577899999998877766875174347862659989983201168559999999899998664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~l~~~~~~~g~~~l~~Gki~~v~r~~~~Gf~~G~v~ieg~~~~~~i~fqNE~L~a~~~g~~~~la~vPDLI~ 320 (389)
T d2o3ia1 241 KTAEAMLDFLRRELDIKGKLLFGPATLASPEVSTAGGFDLGKVVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAIS 320 (389)
T ss_dssp CSHHHHHHHHHHHHCCCCEEEEEEEEECCC----------CEEEEESSSCEEEEEESSSEEEEEETTCSSCSEETTSEEE
T ss_pred CCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEECEEEEEECCCCCEEEECCCEEE
T ss_conf 24327999998732667868999689997799705871789999907985899999814189998798978997796799
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~lD~~tG~pitte~~~~~~~~g~~~~ryG~~V~Vi~~pa~~~wrt~~~l~~~GP~~~~fGy~~~y~P~e 389 (389)
T d2o3ia1 321 YFVEGEGQHVFSNGDLSGNDHGLDPSVRGRKAAVIALPAAAPLSEGLILQSFADELAQLGYLGPYAPVD 389 (389)
T ss_dssp EEECSSSCCCCCHHHHBCSSSSBCTTTTTSEEEEEEECCCGGGSSHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCHHHHHHCCCHHHHCCCCCCCCCCC
T ss_conf 986688864423332345556654234798899999609827486333655095055359997765288
|
| >d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29278.75 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~n~~kplC~i~G~a~~sKDN~IRig~~g~i~V~REPyVSC~p~eC~~FaL~QGa~l~~kHSNgTi~DRsp~RtL~s~ 80 (388)
T d1f8ea_ 1 RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW 80 (388)
T ss_dssp CCCCCCCCEECCCSEEEEEEECCHHHHHTTSCBEEEEEEEEEEETTEEEEEEEEEEEESSSGGGTTTTCSCCTTCEEEEE
T ss_pred CCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEC
T ss_conf 94011376666433146661477168638987899826512028202034762043101786668841566510113441
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~lG~~p~~~ns~f~~vaWSsssCHDGk~Wl~i~vtG~D~nA~A~~~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vv 160 (388)
T d1f8ea_ 81 PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV 160 (388)
T ss_dssp ETTSCCBTTTCEEEEESSEEEEEECSSSEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCCCBTTEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEE
T ss_conf 26899966774589998643444689724899878798883799998999963265444311100322048989988999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 mTDG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg 240 (388)
T d1f8ea_ 161 FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP 240 (388)
T ss_dssp EEEECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEEETTTTEEEEEECCCS
T ss_pred EECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECC
T ss_conf 92688778631589998566388876169886731763422899946999706888888975995455431443278646
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~DTPR~~D~s~g~C~~p~~~~g~~GVKGf~f~~G~~vW~GRTiS~~sRsGfE~~~v~~gwt~~~s~~~~~q~iv~n~n 320 (388)
T d1f8ea_ 241 VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD 320 (388)
T ss_dssp SCCSSSCCCCCSSCCSSSCCCSCCSCCCCCCEECCTTSCEEEECSCSSSSEEEEEEECTTTTTCTTCCCSEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCEEEEECCC
T ss_conf 44789998988866478987778888734314766897687664247667761699934875276603204228996587
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 wSGYSGsF~~~~~~~~C~~pCFyVElIRGrp~E~~v~WTSnSiv~fCG~~~~~g~~swpDGA~i~ff~ 388 (388)
T d1f8ea_ 321 WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL 388 (388)
T ss_dssp ECCCEEEECCTTCSSSEECCEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGGC
T ss_pred CCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 77561771234348873011489999618876563467407779993679986786689865465559
|
| >d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Vacuolar ATP synthase subunit C superfamily: Vacuolar ATP synthase subunit C family: Vacuolar ATP synthase subunit C domain: Vacuolar ATP synthase subunit C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29276.08 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~ 80 (388)
T d1u7la_ 1 LYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIE 80 (388)
T ss_dssp CCCCCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGTSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97565069998778788889850468999985225887236304798777135999998788888788899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~R 160 (388)
T d1u7la_ 81 ILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAER 160 (388)
T ss_dssp HHHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHEEEECCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987236110321676878138987564460444288889899999999999998889999999999999999998740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 K~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~ 240 (388)
T d1u7la_ 161 KKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQ 240 (388)
T ss_dssp HTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHH
T ss_pred CCCCCEEECCHHHHCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHCEECCCEEEEEEEEEHHHHH
T ss_conf 04785262427752798872553314058999961531788999986325762687155302568805899999723199
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 eF~~~aRE~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~~wiHiKalRvFVESVLRYGLP~~ 320 (388)
T d1u7la_ 241 EFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPH 320 (388)
T ss_dssp HHHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999997594304266797899999999999999999999999999999999999999998568766433453589834
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 F~~~li~p~~k~~kklr~~L~~~f~~L~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ey~PyV~~~i~l 388 (388)
T d1u7la_ 321 FNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASLVDTEYEPFVMYIINL 388 (388)
T ss_dssp EEEEEEEECTTCHHHHHHHHHHHHGGGGCTTCC------------------------CCSSEEEEEEC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 13899950872589999999998634265300234446667776543212335677515549998349
|
| >d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29275.09 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 lR~tT~GESHG~aig~vIdG~PaGl~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~v~ilSGv~~G~TtG~PI~~~I~N~D 80 (388)
T d1qxoa_ 1 MRYLTAGESHGPRLTAIIEGIPAGLPLTAEDINEDLRRRQGGYGRGGRMKIENDQVVFTSGVRHGKTTGAPITMDVINKD 80 (388)
T ss_dssp CEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHCSTTCCTHHHHCCCCCEEEESEETTEECSSCEEEEEECGG
T ss_pred CCEEECCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCC
T ss_conf 95541313688834899816186887499999999955798999997668999827994644389806774499998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~PRPGHAD~~~~~Kyg~~d~r~gggRsSaReTa~rVAaGaiAk~~L~~~gI~v~s~ 160 (388)
T d1qxoa_ 81 HQKWLDIMSAEDIEDRLKSKRKITHPRPGHADLVGGIKYRFDDLRNSLERSSARETTMRVAVGAVAKRLLAELDMEIANH 160 (388)
T ss_dssp GGGGTTTTCSSCCCGGGTTTTCCCSCCTTSSHHHHHHHHTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 77754444411123455432012457888435789987478656687751688999999999999999999819735235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~c~d~~~~~~m~~~I~~ar~~gDSlGG~ve~~~~gvP~GLG~pv~~d~kLd 240 (388)
T d1qxoa_ 161 VVVFGGKEIDVPENLTVAEIKQRAAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLD 240 (388)
T ss_dssp EEEETTEECCCCSSCCHHHHHHHHHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEEEEEESCCTTCSCSSSGGGCHH
T ss_pred EEEECCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 68741320267443687888764311556467868855668889999853887676399999717833368866776541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~La~AlmSIpAvKgvEfG~GF~~a~~~GSe~nD~~~~~~~~~~~~~tN~~GGi~GGISnG~pI~~rva~KPtsSI~~~q 320 (388)
T d1qxoa_ 241 ARLAQAVVSINAFKGVEFGLGFEAGYRKGSQVMDEILWSKEDGYTRRTNNLGGFEGGMTNGQPIVVRGVMKPIPTLYKPL 320 (388)
T ss_dssp HHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTSCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCE
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 89998774243113453056488897421455650100466784113688762016777788769999957865567755
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~Tvd~~~~e~~~~~~gRhDpCivpRAvpV~EAm~alvLad~~L~k~g~d~l~~~~~~~~~y~~~~~~~ 388 (388)
T d1qxoa_ 321 MSVDIETHEPYKATVERSDPTALPAAGMVMEAVVATVLAQEILEKFSSDNLEELKEAVAKHRDYTKNY 388 (388)
T ss_dssp EEECTTTCCEEEECCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHSCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 53566898067246898897075532899999999999999999857775999999999999998519
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29273.53 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
=
T Consensus 1 gll~la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 1 GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCCTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 96999999998699999999999999868998999999999999869999999999999985999899999999996420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLK 160 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 00222222222121122222222222222222222222222221112222222222222222222110001356788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 240 (388)
T d1w3ba_ 161 AIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 240 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40258610689986363010247199999999999984946499999971552200529999999998577755479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (388)
T d1w3ba_ 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999878999999999999984999899999999999974879999999986540487300101579999998789
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 321 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999999986889899999999999985999999999999997099989999999999998589
|
| >d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 3-hydroxykynurenine transaminase species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]
Probab=100.00 E-value=0 Score=29272.24 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~PGP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a 80 (388)
T d2ch1a1 1 KFTPPPASLRNPLIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAG 80 (388)
T ss_dssp CCCCCCGGGSSCCCCCCCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHH
T ss_pred CCCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
T ss_conf 98999634437668885540108998889999997476778878899999999999999999689997199976848999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ea~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~ 160 (388)
T d2ch1a1 81 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP 160 (388)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf 99999974211133333222310000033443311332123565445521012344430478633565302222322211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2ch1a1 161 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLL 240 (388)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH
T ss_pred HHHHCCHHCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 12200000146540366532102346621230576399982655457887289972427788754202575531025603
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~ 320 (388)
T d2ch1a1 241 LLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIM 320 (388)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEE
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEE
T ss_conf 55543023320025576532778999999999998766677898887777877766553022323689788098489998
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~p~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~~~~~~ 388 (388)
T d2ch1a1 321 IPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYIF 388 (388)
T ss_dssp CCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999998513998996788655698899717717899999999999999999961986589
|
| >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
Probab=100.00 E-value=0 Score=29271.26 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~~~~~LtfDDVlLvP~~st~~~~~vdl~~~~t~~~~l~iPIisA~MDtVt~~~mAi~ma~~GGlgVihr~~~ie~q~~ 80 (388)
T d1eepa_ 1 NKITKEALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRK 80 (388)
T ss_dssp CCSCCCCCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 96333578841079827988777778354489538776699877169888788999999998798899908999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~~Vk~~~~~~~~~~~~d~~~~~~~~~t~~~~~~~~~a~~d~~~~~~~p~~~~d~~~~l~vgaAvg~~~~~~~ra~~L~ 160 (388)
T d1eepa_ 81 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELV 160 (388)
T ss_dssp HHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
T ss_conf 99986230044520036763310223300554422547877188876506777655224101220589789999999877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~aG~D~ivID~AhG~s~~~~~~i~~ik~~~~~v~vIaGNV~T~e~a~~L~~~GaD~VkVGiGpGs~CtTr~~~GvG~pq~ 240 (388)
T d1eepa_ 161 KAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQI 240 (388)
T ss_dssp HTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHH
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 51254543103663167799999999987899866500126799999998629775543122232345654236674238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAla~GAd~VMlG~~lAg~~Espg~~~~~~g~~~k~~~gm~S~~a~~~g~ 320 (388)
T d1eepa_ 241 TAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGS 320 (388)
T ss_dssp HHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------------
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHCCC
T ss_conf 89999999861577157853666737730136785155034053654136788418985892740155665487775445
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~~~~l~gglrs~m~y~Ga~~l~e~~~~~~fv~vt~~ 388 (388)
T d1eepa_ 321 KSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISHS 388 (388)
T ss_dssp ----------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCC
T ss_conf 21013334664422346704987078887899999999999997421586629998539889997899
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=0 Score=29270.51 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~t~~nw~~~~~~r~~f~~~~~~~pt~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~t~a 80 (388)
T d2dcfa1 1 STGQHPARYPGAAAGEPTLDSWQEPPHNRWAFAHLGEMVPSAAVSRRPVNAPGHALARLGAIAAQLPDLEQRLEQTYTDA 80 (388)
T ss_dssp CCCCCCCSSTTCCTTCSCTTTTTSTTHHHHHTTCGGGTSCCCCCCSCC----CCCEEECTTHHHHCTTHHHHHHHTTEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
T ss_conf 99888455889523677847864886301205558774884342079888775333212444455433999987428847
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~lV~~~G~iv~E~y~~~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe~~~~~~~~iTi~~LL~mtsGl 160 (388)
T d2dcfa1 81 FLVLRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISI 160 (388)
T ss_dssp EEEEETTEEEEEEECTTCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGGGTTSTTSSCBHHHHHTTCBCC
T ss_pred EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 99998998999974699884320148999889999999999734854456752302454404543215677764233677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pg~~f~Y~~~~~~lLg~iie~~tG~~~~~~~~e~i~ 240 (388)
T d2dcfa1 161 DYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWIVERVTGLRYVEALSTYLW 240 (388)
T ss_dssp SCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCCSCBSSCCCCHHHHHHHHHHHHHHHCSCHHHHHHHHTG
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 64234355651355666653101001246188999874067679998789806789999999987517630222333204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~PlGm~~~~~~~~~~~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 320 (388)
T d2dcfa1 241 AKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDGGVAPGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDG 320 (388)
T ss_dssp GGTTCSSCCEECBCTTCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 84212222222334567632100323132214577788874885488605649999998568972001245656678999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~Yg~~ww~~~~~~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~av 388 (388)
T d2dcfa1 321 SYTRQWWCTGNERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALDAV 388 (388)
T ss_dssp EEETTEEECCCTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97864551699997089887789689999069989999599999985468999999999999997229
|
| >d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: phi29 DNA polymerase species: Bacteriophage phi-29 [TaxId: 10756]
Probab=100.00 E-value=0 Score=29268.23 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~t~~s~~~~~fk~~~~~~~~~~~~p~~~~~~~~~ir~~y~GG~~~~~~~~~~~~~~~i~~yD~nSLYPs~M~~~~~p~g~ 80 (388)
T d2py5a2 1 MTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGE 80 (388)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHHSCCCCHHHHHHHHTTCCCCCEEECGGGBTCEECSEEEEEETTHHHHHHHHSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCC
T ss_conf 96307899999999765146540888991477888971217623214544555668548986557239998337899776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d2py5a2 81 PIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEY 160 (388)
T ss_dssp EEEEESSCCCCTTSCEEEEEEEEEEEECTTCCCCCCC-------CCSCCSBCTTSCEEEEEEHHHHHHHHHHEEEEEEEE
T ss_pred CEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEE
T ss_conf 04653614666666770489999822765557766530344677865784668850567873899999995587258888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~f~~~~~~~k~~~~~~~~~kk~~~~~~q~~~KLl~NSlYGk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2py5a2 161 ISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYT 240 (388)
T ss_dssp EEEEEEEEESCTTHHHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHTCCSBCCBEEEEECTTSSEEEEECCCCBCCCCCH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHEECCCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCH
T ss_conf 76677212357899999842588774017799999974542441013335655434641443200121210001464431
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~ia~~ita~~r~~~~~~~~~~~~~v~Y~DTDSi~~~~~~~~~~~~~~~~~~~lg~~~~E~~~~~~~~~~~K~Y~~~~~~~ 320 (388)
T d2py5a2 241 PMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMK 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEETTEEEEESSSCCGGGGGGBCSSSTTSEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCHHHCCCCCHHHCEEECC
T ss_conf 48899998888889987641488379983636886577621567764245650546301010112116643201457424
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~v~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~~~~ 388 (388)
T d2py5a2 321 EVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK 388 (388)
T ss_dssp EETTEEEECBTTBCSEEEEEEEETTCCHHHHTTCCTTTCSTTCEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHCHHHHEEECCEEEEECCCCCEECCCEEECC
T ss_conf 54332233442340152456455231699999987750502411656351177069826524402239
|
| >d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=29267.28 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 80 (388)
T d1gdea_ 1 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNG 80 (388)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 95156410894689999999858998199999889998789999999999855764789985779999999999875133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (388)
T d1gdea_ 81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT 160 (388)
T ss_dssp CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE
T ss_pred CCCCCHHEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC
T ss_conf 56787020431367535889999986589798998899848899999985998999514556687879999997375687
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 240 (388)
T d1gdea_ 161 RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR 240 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHCCCCCCC
T ss_conf 59998999698888689999999999999869999997088655333677777656057788089995772433376361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl 320 (388)
T d1gdea_ 241 LGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYI 320 (388)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEE
T ss_pred EEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 78997302102343211232223333220045789986032036899999999875334566653212566589833799
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l~e~k~~ 388 (388)
T d1gdea_ 321 FPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERKLV 388 (388)
T ss_dssp CCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99888879999999999998599999810451989999799996499999999999999999961799
|
| >d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA polymerases {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29266.76 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~g~~ltr~~~d~~~g~~i~~~~~t~~G~~~v~v~~q~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~V~~v 80 (388)
T d1q8ia1 1 AQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGL 80 (388)
T ss_dssp CEEEEEEEEEEECCTTCBEEEEEEEETTEEEEEECSCBCEEEEEEGGGHHHHHHHTTTCCSEEEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCEECCEEEECCCCCEEEEE
T ss_conf 98623630024771897799999985998879998799679999854567999998547781664322055789779999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 y~~~~~~~r~l~~~l~~~g~~vyEaDI~~~~RfliD~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~P~lkilsfDIE~~~ 160 (388)
T d1q8ia1 81 YCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTR 160 (388)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCBSTTCCHHHHHHHHTTCSSEEEEEEEEETTEEEEEEEEECTTCCCCCCEEEEEEEECT
T ss_pred EECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCCCCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEEEEEECC
T ss_conf 92899999999998862698589768996884899787888858998624661541067566788997359999999747
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~si~l~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~E~~LL~~F~~~i~~~dPDii~GyNi~~FDlpyL~~Ra~~~~ 240 (388)
T d1q8ia1 161 HGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 240 (388)
T ss_dssp TSCEEEEEEEETTEEEEEEESSCCSCCTTCSSEEEEESSHHHHHHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 88667898548998889999567777787855999969999999999999987199889960788878899999999858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~~~lgr~~~~~~~~~~~~~~~~~~~~i~Gr~~lD~~~~~k~~~~~~~sy~L~~Va~~~Lg~~K~~~~~~~~~~~~~~~~ 320 (388)
T d1q8ia1 241 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRF 320 (388)
T ss_dssp CCCCCSSSSCCCEEEEECSSSCEEEEEBTTBEEEEHHHHHHHSCCCCSCCCHHHHHHTTC------------CTHHHHHH
T ss_pred CCCHHHHCCCCCEEEECCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 87404424772205875655651133020499860268897563043546776755410024455557255589987157
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~d~~~l~~Y~~~D~~Lv~~L~~k~~~i~~~~ela~l~g~pl~~~g~s~~~~~~lll~~~~r~g~v~P 388 (388)
T d1q8ia1 321 AEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAP 388 (388)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCSCTTTTCCHHHHHHHHHHHHHHHTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCEECC
T ss_conf 12489999998999999999999877899999999884979899788499999999999997799587
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29266.06 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~p~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg 80 (388)
T d1erja_ 1 HYLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80 (388)
T ss_dssp CCCCCTTSSSCTTCCCCHHHHCCCSSSSCTTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEE
T ss_pred CCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 95687113244147999705765843475322468897089868877762054107607999968999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~ 160 (388)
T d1erja_ 81 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 160 (388)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 49948999813640576631665443244321110146778988999988999801213444111121111111111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 240 (388)
T d1erja_ 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240 (388)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
T ss_conf 11111111011111111112221015654101111110000124544211236887875899738981999634557300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 320 (388)
T d1erja_ 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320 (388)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCC
T ss_conf 01024433345778987899997999999999789928987515776432101344420011012455327899988999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k~ 388 (388)
T d1erja_ 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388 (388)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEC
T ss_conf 99999969897999999999699999688997899998467425899999999918997999762149
|
| >d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29269.28 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~pGP~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT 80 (388)
T d1h0ca_ 1 HKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGH 80 (388)
T ss_dssp CCCSSCCCGGGGSCCCCCCCEECSSSCCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHH
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 98767997676555688767212499988999999975768888789899999999999999996899983899869489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i 160 (388)
T d1h0ca_ 81 CALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVL 160 (388)
T ss_dssp HHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
T ss_conf 99999999861268740231134301000012211111133333587655216899987616971137874200014445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d1h0ca_ 161 QPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLD 240 (388)
T ss_dssp CCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTC
T ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
T ss_conf 67999988764025441001112344332112345651220333321468972677750078887544304666432212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~ 320 (388)
T d1h0ca_ 241 IKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTT 320 (388)
T ss_dssp HHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEE
T ss_pred CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEE
T ss_conf 00023443210233443556657999988878999997166531000121047778777633753126887773880899
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~~ 388 (388)
T d1h0ca_ 321 VAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKK 388 (388)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC-
T ss_pred EECCCCCCHHHHHHHHHHCCCEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98899989999999998519989957852204998998477777999999999999999999862569
|
| >d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Phormidium lapideum [TaxId: 32060]
Probab=100.00 E-value=0 Score=29265.76 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 80 (388)
T d1j32a_ 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKL 80 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94523745399589999999999998779986899997899999899999999998558877899988999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~ 160 (388)
T d1j32a_ 81 QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 87316577885599868789999999999819989899928981879999998568599983153336678999999727
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 240 (388)
T d1j32a_ 161 TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA 240 (388)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTT
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 77874999889999877403535554432011237867972056531034677887888948522156057037705413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~g 320 (388)
T d1j32a_ 241 MTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDG 320 (388)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCB
T ss_pred CCHHHEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 60657599998899999998766521245668999887632445099999999999999999999998479978668993
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 g~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~~~l~~l~ 388 (388)
T d1j32a_ 321 AFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGIL 388 (388)
T ss_dssp TTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 68999988887999999999999869999981643599996999983899999999999999999859
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29264.09 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~~~RA~eL~~~I~~~~~d~G~~ 80 (388)
T d1ku0a_ 1 ASPRANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRACEAYAQLVGGTVDYGAA 80 (388)
T ss_dssp CCCCCCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98877999889818866677544676214678536468999858978998516986678999999999986345453376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTT 160 (388)
T d1ku0a_ 81 HAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTT 160 (388)
T ss_dssp HHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 77652302237567220003366786358604554587999999702356432222212344333223567750688885
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 IsTPH~GS~~AD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~~es~~~~~~~~~~s~~~~~~~~a 240 (388)
T d1ku0a_ 161 IATPHDGTTLVNMVDFTDRFFDLQKAVLEAAAVASNAPYTSEIYDFKLDQWGLRREPGESFDHYFERLKRSPVWTSTDTA 240 (388)
T ss_dssp ESCCTTCCGGGGSTTHHHHHHHHHHHHHHHHHHHTTSCGGGCCCCCCBGGGTBCCCTTCCHHHHHHHHHTSHHHHSSSBH
T ss_pred CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
T ss_conf 05788986366542346652147889998876403542110002466653343457651099999988538876666401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~dLtt~g~~~fN~~~~~~p~v~Y~S~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NDGlV 320 (388)
T d1ku0a_ 241 RYDLSVPGAETLNRWVKASPNTYYLSFSTERTYRGALTGNYYPELGMNAFSAIVCAPFLGSYRNAALGIDSHWLGNDGIV 320 (388)
T ss_dssp HHHHSHHHHHHHHHHCCCCTTSEEEEEEECCEEECTTTCCEEECTTSCHHHHHHTHHHHTTCCBGGGTBCGGGCCBSSSS
T ss_pred HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03106599999733357899846777785143345777632224444454334557545553346532137679988865
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~v~S~~~g~~~~~~~~~~~~~~i~~G~W~~~~~~~~DHld~iG~~~~~~~~~~~~Y~~~a~~L~~l~~ 388 (388)
T d1ku0a_ 321 NTISMNGPKRGSNDRIVPYDGTLKKGVWNDMGTYNVDHLEVIGVDPNPSFNIRAFYLRLAEQLASLRP 388 (388)
T ss_dssp BGGGSSSCCTTCCCCEEECCSSCCBTSEEEEEEESCCTTGGGTSSCCTTSCHHHHHHHHHHHHHTCCC
T ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88557587056777543345654455011036547649997388987877999999999999843999
|
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=0 Score=29267.21 Aligned_cols=1 Identities=0% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~ 80 (388)
T d1x38a1 1 DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA 80 (388)
T ss_dssp CCCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99876889999999999999877999999613064445688788985256616636876667898999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~ 160 (388)
T d1x38a1 81 CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY 160 (388)
T ss_dssp HHTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGG
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87436898836633655675235664210033311025897999999998657887448763367763534564446556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 et~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~ 240 (388)
T d1x38a1 161 ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240 (388)
T ss_dssp GSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 67667889999988653664110135430122223455674213314436886646740334530488899886145577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~ 320 (388)
T d1x38a1 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK 320 (388)
T ss_dssp HHHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC
T ss_conf 77605651223422357756657999999998730599752424221023312356775789999998517881347853
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S 388 (388)
T d1x38a1 321 YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS 388 (388)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 89999999999985998999999999999999999489988877824544069999999999999639
|
| >d1zeea1 a.266.1.2 (A:6-392) Hypothetical protein SO4414 {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Hypothetical protein SO4414 species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=29201.55 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~d~wir~~f~~~n~~le~~y~~~~~~~~~~~~g~~~k~~l~~~g~~~i~~ll~egntdegf~~~f~llgnvg~ym 80 (387)
T d1zeea1 1 YNTEAFDEWIRSRFVELNSQLEQLYYQQTDRANVQEVGTELKHTLESEGRELVKALLDEGNTDEGFDSAFDLLGNVGLYM 80 (387)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHHHHHSSSSSCCSSSCHHHHHHHHHHHHHHHHTTTTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96678889999999998799999997477732342000899999999889999999966785231799999975158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~acrrh~i~ep~re~~~p~~eas~la~~~~as~gv~prf~~~hl~~hn~a~~~~~k~ft~l~de~~f~~~nt~~~~a~~~ 160 (387)
T d1zeea1 81 AACRRHEITEPTRETTSPLLEASALAMHIGASIGVTPRFATAHLTTHNRAHNGIYKRFTDLPDEKLFVDYNTKGILAYKR 160 (387)
T ss_dssp HHHHHTTSSCTTTCSSCSCHHHHHHHHHHHHHHTSCSSCCHHHHTTTCCEETTEECCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99874267785301368414437999988886399923566666315665410676305883578999875799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~l~~~~~lgi~hp~~~~ll~~~~~aLq~v~~sn~~l~~~ld~~~Ff~~vRPyykP~rVG~q~YrG~sAgqsa~I~vl 240 (387)
T d1zeea1 161 ASDALLKIQPLGISHPISHDLLRVTKQALQDVIESNQQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFAGINVI 240 (387)
T ss_dssp HHHHHHTTTTTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHTGGGGCCEEETTEEECCCCTTCSHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCHHHCCCHHHH
T ss_conf 99998764287899754899999999999999999999998439999899856312543237751079971201008999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 D~LLGvcha~dP~ysqfL~dmr~YMPP~hra~L~d~~r~PSl~d~vLsa~~~~~~~~y~~nL~aflevC~~hg~afR~hH 320 (387)
T d1zeea1 241 DLTLGLCFANEASYSQMLVDKFLYMMPEDQQILRECMRRPNLMDDFLQAKGCIHQDWYQENLKLFIEVCELHGQTAIQHH 320 (387)
T ss_dssp HHHTTSSCTTSHHHHHHHHTTGGGSCHHHHHHHHHHTTSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975563799409999999986179789999999863871689998635650038999999999999999999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
=
T Consensus 321 lQlV~KYI~~pS~~~~~q~~~~lTaSGPpl~vLLk~LkKLRD~R~AA~r~Di~tr~~d~~~l~~~l~ 387 (387)
T d1zeea1 321 NELVTKYIAEPSVSMEQQHLAKVTASGPPLHVLLASLERLRDRRAAVLRDDIRTRYYDLKKLKDSLR 387 (387)
T ss_dssp HHHTSCC------------------------CCHHHHHHHHHHHTTCCCSSSCCTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999972887434266566447899807899999998665542031137763999999998609
|
| >d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29201.25 Aligned_cols=1 Identities=100% Similarity=0.836 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 e~~n~t~plC~i~gfa~~sKDN~iR~g~~g~i~V~REPyVSC~p~eCr~FaL~QGa~l~~kHsNGTi~DRsp~R~L~s~~ 80 (387)
T d2aepa1 1 EYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNE 80 (387)
T ss_dssp CCCCCCSCBCCCSEEEEEEECCHHHHHTTSCCEEEEEEEEEECSSCEEEEEEEEEEESSSGGGTTCCCSCCTTCEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEECC
T ss_conf 95546676675343046763662575378866998266020284401357631321027866688426654101035513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lG~P~~~~s~~~~vaWSsssCHDGk~wl~I~vtG~D~nA~A~i~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vvmT 160 (387)
T d2aepa1 81 LGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKILRTQESECVCINGTCTVVMT 160 (387)
T ss_dssp TTCCCCTTCEEEEECSEEEEEECSSCEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCEEETTEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEEEE
T ss_conf 67997558657899863243468862489987768888089999899985326544430120042204898998899992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 DG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg~~ 240 (387)
T d2aepa1 161 DGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLV 240 (387)
T ss_dssp EECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEECTTTCCEEEEECCCSSC
T ss_pred CCCCCCCCEEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCHHCEEEEEEEECCCC
T ss_conf 68878853068999845638877606888673276330379982699970688877897499540022045305753644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~DTpRp~D~s~~g~C~~p~~~~G~~GVKGf~F~~Gn~vW~GRTiS~~sRsGfE~~~v~~gwt~~~Sk~~~~~q~iV~n~n 320 (387)
T d2aepa1 241 GDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVDRGN 320 (387)
T ss_dssp CCSSCCCTTTCCCCSSSCCCSSCSSCCCCCEEEETTEEEEEECSSSSSSEEEEEEEETTTTTSTTCCCEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf 78999888776655658888888886163368658973876532376677616999458875878634111479995588
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 wSGYSGsF~~~~k~C~~pCF~VElIRGrp~E~~v~WTS~S~v~fCG~~~~~~~~swpDGA~i~~mp~ 387 (387)
T d2aepa1 321 RSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI 387 (387)
T ss_dssp ECCCEEEEEEECSSSEEEEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGSCC
T ss_pred CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7752257996899842002899996078764505785187799936789867866899766676669
|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpB, AAA+ modules species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29197.83 Aligned_cols=1 Identities=0% Similarity=-0.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~l~~~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~ 80 (387)
T d1qvra2 1 TYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 80 (387)
T ss_dssp CCSHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCE
T ss_conf 93779999798899998599998748089999999998248899976879999889999999999998089997886966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~ 160 (387)
T d1qvra2 81 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTL 160 (387)
T ss_dssp EEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECH
T ss_pred EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCH
T ss_conf 89955766652667413689999999998505899669872408888427778774138999999973788516663689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a 240 (387)
T d1qvra2 161 DEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA 240 (387)
T ss_dssp HHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99987633679998246112799867889999999999987404774669999999985023666566704688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~a~~~i~~~s~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~ 320 (387)
T d1qvra2 241 AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH 320 (387)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998641589588999999999999999998740145788887653323567999999999999888879999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~Le~lr~~le~A~r~gd~e~AaeL~y~~ip~le~el~~l~~~~~~~~lvr~~VteedIA~VVSrWTG 387 (387)
T d1qvra2 321 RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTG 387 (387)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHTTHHHHHHHHHHHHHHHSSSCSSCCSEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999999999764688788875250799999999999873579877686398999999976109
|
| >d2ex0a1 c.87.1.9 (A:26-412) Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteurella multocida [TaxId: 747]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Sialyltransferase-like domain: Alpha-2,3/2,6-sialyltransferase/sialidase species: Pasteurella multocida [TaxId: 747]
Probab=100.00 E-value=0 Score=29197.70 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ktlEvYvD~AsLPslqqlm~iiq~ne~~~n~rli~w~R~~i~d~~l~~~~n~~F~~~~~n~~~~~~~~il~~~~~~~~in 80 (387)
T d2ex0a1 1 KTITLYLDPASLPALNQLMDFTQNNEDKTHPRIFGLSRFKIPDNIITQYQNIHFVELKDNRPTEALFTILDQYPGNIELN 80 (387)
T ss_dssp EEEEEEEESSSHHHHHHHHHHHHTTTCSSSCEEEEETTCCCCHHHHTTCSSEEECCEETTEECTHHHHHHTTCCSCEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 95699954355615999999986046778821577742368778987301021354457895299999997174433799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~~Nt~hS~d~~~~I~~~~~~~~~kv~i~~L~lYDDGSaEYV~l~~~k~~d~~~~~~~~~~~l~~~l~~Gt~~~~n~~~~ 160 (387)
T d2ex0a1 81 IHLNIAHSVQLIRPILAYRFKHLDRVSIQQLNLYDDGSMEYVDLEKEENKDISAEIKQAEKQLSHYLLTGKIKFDNPTIA 160 (387)
T ss_dssp EEEESTTHHHHHHHHHHHHHHTTTTEEEEEEEEECCSHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHCCCCCSCHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 82121767776899999998740573048887752885888667764133034445678899988876387778985101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Y~w~qlypt~YH~Lr~Dyf~~~~~L~~Lk~yL~~n~kqM~Wd~f~~fn~~Qk~lf~~~vgf~~E~~qq~~~q~~nFiFt 240 (387)
T d2ex0a1 161 RYVWQSAFPVKYHFLSTDYFEKAEFLQPLKEYLAENYQKMDWTAYQQLTPEQQAFYLTLVGFNDEVKQSLEVQQAKFIFT 240 (387)
T ss_dssp TTCGGGTSCEEEEESCHHHHHHCGGGHHHHHHHGGGEEECCSCHHHHSCHHHHHHHHHHHTCCHHHHHHTCCSSEEEEEE
T ss_pred EEEHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
T ss_conf 33044406743431105565057452479999840333467523200698888899987179899999997267875997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 GTts~~~~~e~~eyyaqqQInvin~a~ne~s~~~~g~~ydLfFKGHP~~~~~N~~I~~~~~~mi~IpakIpFEvLmMTg~ 320 (387)
T d2ex0a1 241 GTTTWEGNTDVREYYAQQQLNLLNHFTQAEGDLFIGDHYKIYFKGHPRGGEINDYILNNAKNITNIPANISFEVLMMTGL 320 (387)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHHHHHSTTSTTCCCTTEEEEEECCTTCTHHHHHHHHHSSSCEECCTTSCHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHCCC
T ss_conf 13455676306778899989998732388996530675115772699865056899743355522644586299987278
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 LPd~VGG~aSSlyFsiP~e~in~ivFtss~~~~s~~d~~~~~lvqVM~~L~iv~~~~V~fw~~~k~~ 387 (387)
T d2ex0a1 321 LPDKVGGVASSLYFSLPKEKISHIIFTSNKQVKSKEDALNNPYVKVMRRLGIIDESQVIFWDSLKQL 387 (387)
T ss_dssp CCSEEEEECCGGGGGSCGGGEEEEEECCCSSCSSHHHHHTSHHHHHHHHTTSCCGGGEEEGGGSCCC
T ss_pred CCHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHCCCCHHHEEEHHHHHCC
T ss_conf 8054336000258975533124899933764256565653839999999777766763676753039
|
| >d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Myotubularin-like phosphatases domain: Myotubularin-related protein 2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29193.43 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~edGW~~yd~~~E~~RlGl~~~~WRiS~iN~~Y~lC~SYP~~lVVP~~isD~~l~~~a~fr~~~R~Pvl~w~~~~~~ 80 (387)
T d1zsqa2 1 EVFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQ 80 (387)
T ss_dssp CCCSSCGGGSCCHHHHHHHTTCSCSSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTC
T ss_pred CCCCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 98788763235889999863899888788542699704588998169828589999999987636997607988759998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~L~RssqP~~g~~~~r~~ede~~l~~i~~~~~~~~~~~I~D~Rp~~na~an~~~ggG~E~~~~Y~~~~~~f~~i~nih~ 160 (387)
T d1zsqa2 81 ATITRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHV 160 (387)
T ss_dssp CEEEEECCBCCTTTTCCCHHHHHHHHHHHHHSSSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHH
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCHHH
T ss_conf 36885178577756787689999999999737776753555477414688752248986552105675245304665278
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 vr~s~~kl~~~~~~~~~~~~~~s~le~s~WL~~i~~~L~~A~~ia~~l~~~~~sVlVh~sdGwD~T~qvsSL~ql~lDpy 240 (387)
T d1zsqa2 161 MRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGY 240 (387)
T ss_dssp HHHHHHHHHHHHSSCCCGGGHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999998558875466775243444499999999999999999970897399857888752489999999973832
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 yRTi~GF~~LIekewi~~Gh~F~~R~~h~~~~~~~~e~sPvFl~FLDcV~ql~~q~P~~FEF~e~~L~~l~~h~~s~~fg 320 (387)
T d1zsqa2 241 YRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFG 320 (387)
T ss_dssp GGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 11188899999988873378632342678777566777985699999999998749740112799999999986026646
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
=
T Consensus 321 tFl~n~e~eR~~~~~~~~t~Slw~~~~~~~~~f~N~~Y~~~~~~~l~P~~~~~~~~~W~~~ylR~~p 387 (387)
T d1zsqa2 321 TFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNP 387 (387)
T ss_dssp TTCSSSHHHHHHTTHHHHSCCHHHHHHTCGGGGBCTTTTSCSSSCCCCCCSTTTCCCCHHHHTCSCC
T ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEHHHHCCCCCC
T ss_conf 4555899999871768787369999987599855978788999857033675667426753335587
|
| >d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Acetylornithine/acetyl-lysine aminotransferase ArgD species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29191.94 Aligned_cols=1 Identities=0% Similarity=-1.255 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
|
T Consensus 1 ~~~~~~~~~~~~~~~y~~~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~ 80 (387)
T d1vefa1 1 WRALLEAEKTLDSGVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPM 80 (387)
T ss_dssp CHHHHHHHHHHBCSCSCCCSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 96688606531489878898318984749999798799998464187665528969999999999976364666557705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~ 160 (387)
T d1vefa1 81 RGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVE 160 (387)
T ss_dssp HHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEE
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999876530232101111246726799999999876113312325656889996123863478655678878899826
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~p~~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PD 240 (387)
T d1vefa1 161 FIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD 240 (387)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred EECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86889799999756897479999787788888649989999999999976926984002224674677765446783776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~ 320 (387)
T d1vefa1 241 ILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPK 320 (387)
T ss_dssp EEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTT
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 33313257887666332221023102236883553799863001011200010333222057665078999998617984
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aLS 387 (387)
T d1vefa1 321 IREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 387 (387)
T ss_dssp EEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 5788521469999982774699999999789759933899899979713999999999999999859
|
| >d1bxba_ c.1.15.3 (A:) D-xylose isomerase {Thermus aquaticus, subsp. Thermophilus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Thermus aquaticus, subsp. Thermophilus [TaxId: 271]
Probab=100.00 E-value=0 Score=29191.82 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~~~~~f~~~~W~~~~~g~dpfg~~~~~~~~~~~~~~~~~~lg~~~~~fHd~d~~p~~~~~~e~~~~~~~~k~~~~~ 80 (387)
T d1bxba_ 1 MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDE 80 (387)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998766147997235787889988543112788999999984499878516665588899878999999999998641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Gl~~~~~t~nlf~~~~~~~Gs~t~pD~~vR~~Ai~~~k~~id~a~~LGa~~~vlW~G~dG~~~~~~~d~~~~~~~~~e~ 160 (387)
T d1bxba_ 81 TGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREA 160 (387)
T ss_dssp HTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHH
T ss_pred CCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68721122454355623324764689889999999999999999998499979975787766776306799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~v~~~a~~~g~~~~i~iEpkP~EP~~~~~~~~~~~~l~~~~~~g~~~~~gl~lD~~H~~l~g~~~~~~v~~a~~~gkL 240 (387)
T d1bxba_ 161 LNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNFVHAVAQALDAGKL 240 (387)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCHHHHCCCCHHHHHHHHHHHCCE
T ss_conf 99999977750788379995168988544214889999999998377020754123044530487668899999983964
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~vh~Nd~~~~~~D~DL~~g~~~~~~~~~~~~~L~~~gy~G~~~fD~~~~r~~~~~~l~~~~~~~m~~~a~ll~~a~~l~ 320 (387)
T d1bxba_ 241 FHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFR 320 (387)
T ss_dssp CCEECCBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHTTCCSCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15574777777887666888621889999999998458876433134567788500689999999999999999999988
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~d~~~~~~l~ary~~~~a~~~~~~~~~~~~~~~l~~~~~~~~a~~~~s~~qE~Le~l~n~~i~g~~~ 387 (387)
T d1bxba_ 321 EDPEVKELLAAYYQEDPAALALLGPYSREKAEALKRAELPLEAKRRRGYALERLDQLAVEYLLGVRG 387 (387)
T ss_dssp TCHHHHHHHHHHTCCCHHHHTTSSSCCSHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHTTCCC
T ss_pred HCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 6768999999987212442201100145679984476678431432672499999999999862369
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29189.80 Aligned_cols=1 Identities=0% Similarity=-1.889 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~l~~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c~~~~~~f~~~~SsT~~~~~~~~~i~Y~~g~~~G 80 (387)
T d2qp8a1 1 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 80 (387)
T ss_dssp CTTTTTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred CCCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEE
T ss_conf 92133025589999899999988999799999989961048926898767881583028871757981899968960999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~D~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~~~~~~~fs~~l~~~~ 160 (387)
T d2qp8a1 81 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAG 160 (387)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCS
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 99999999847773367478999982477621134556622334564435788778537888626574215767632455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~ 240 (387)
T d2qp8a1 161 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 240 (387)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCEECCCCCCCCCCCCEEEECCCCEEECCH
T ss_conf 44456644457784467456233334573586314543336899879999999656654567764169816997086889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~fp~~~~~~~~~~~~~~~~~~i~p~~y~~~~~~~~~~~~~ 320 (387)
T d2qp8a1 241 KVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDD 320 (387)
T ss_dssp HHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHEEECCCCCCCCCE
T ss_conf 99999999856001465567754453156410038986421340578866621233079998879911551356786766
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 c~~~~~~~~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (387)
T d2qp8a1 321 CYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYN 387 (387)
T ss_dssp EEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEEEECCCGGGGSCC
T ss_pred EEEEEECCCCCCEEEHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 8998707999977970894286899998999999999778687788131256798888984652789
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=100.00 E-value=0 Score=29193.11 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~f~~g~d~s~~~~~e~~g~~~~~~~g~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~ 80 (387)
T d1ur4a_ 1 GLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEK 80 (387)
T ss_dssp CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHH
T ss_pred CCCCCCCCCCCHHCEEEEECHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 95223578998100777861068999867977889999710599999983998799404447743335767776242999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~ 160 (387)
T d1ur4a_ 81 AIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 160 (387)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCB
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 99999999987997999867787776877777850321322047999999999999998863699812799724888674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~~~~~~~~~l~~ 240 (387)
T d1ur4a_ 161 AGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTS 240 (387)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf 67688999999999999998730887527872267653277889999998659876400202312347608999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWep~w~~~~~~ 320 (387)
T d1ur4a_ 241 VADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPA 320 (387)
T ss_dssp HHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSSCG
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99983996389985044347786444765787633356777899999999999999985478805999735763136777
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~w~n~aLFd~~g~~l~~l~~f~~~~~~~~~ 387 (387)
T d1ur4a_ 321 HRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGTPF 387 (387)
T ss_dssp GGHHHHHHHHHHHCCSSBCGGGTTTCTTTHHHHCBSCSCGGGCSBCTTSCBCGGGGHHHHHHHCCC-
T ss_pred CCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 6543450345412642032213324641123456777411210335589867577877413478999
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=100.00 E-value=0 Score=29189.48 Aligned_cols=1 Identities=0% Similarity=-1.489 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~p~~g~W~~~~~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~ 80 (387)
T d1k3ia3 1 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPG 80 (387)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEE
T ss_conf 98788978716786889861017899925999999984057666788776068999988889686667789874452568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~ 160 (387)
T d1k3ia3 81 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 160 (387)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEE
T ss_conf 99946886898636888621675675574421565664210130355317826652136633354320566348889551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (387)
T d1k3ia3 161 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 240 (387)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 15887644311346651365042269997079877874686774781486667173166556676657632226378861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 241 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
T ss_conf 35882478875367887752100000111113567884060366566543433566058749998884567668899470
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~Ppyl~~~~ 387 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSN 387 (387)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBCTT
T ss_pred CEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHCCCCC
T ss_conf 1079897999918878899975531279999889999999698767888661148998260405898
|
| >d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Tryptophanyl-tRNA synthetase (TrpRS) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29114.56 Aligned_cols=1 Identities=100% Similarity=1.367 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~pw~v~~~~~~~~dy~kl~~~fg~~~~~~~~~~~~~~~~~~~~h~~~rRg~~f~hrd~~~il~~~~~gkp~~vytG 80 (386)
T d1r6ta2 1 EDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTG 80 (386)
T ss_dssp CCEESSSCEECSCTTCCCHHHHHHHHTCEECCHHHHHHHHHHHCSCCCHHHHTTSEEEEESHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEC
T ss_conf 98438660668876666699999984888688899999997536886154533604422679999999974998589945
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~i~~~s~~~ 160 (386)
T d1r6ta2 81 RGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYM 160 (386)
T ss_dssp ECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEEEEEHHHHG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 17998402899999999999999721324489932517640456999999999999999999817895002899684799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~l~~~~~~~~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvpvG~DQ~~h~~ltR 240 (386)
T d1r6ta2 161 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTR 240 (386)
T ss_dssp GGCTTHHHHHHHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98899999999998756514888864335677676531279889999983470542255665420110262899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Dia~r~~~~~p~~l~~~~lpgL~G~~~KMSsS~~~s~I~l~D~~~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~ 320 (386)
T d1r6ta2 241 DVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFM 320 (386)
T ss_dssp HHGGGGTCCCCEEEEECCCEETTEEEEECCTTSTTCCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHH
T ss_pred HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99998278886221144556778743445567777434635988899997661143168765446000389841317999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~~~rekr~~~~~~~v~~~l~~~kl~ 386 (386)
T d1r6ta2 321 YLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLA 386 (386)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTSCCCCC
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999986987589999999976999989999999999999978999999998888999985546799
|
| >d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29114.26 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~pe~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS 80 (386)
T d1v8za1 1 MWFGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGA 80 (386)
T ss_dssp CEETTEECCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSB
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97678098848788899999999999999639899999999987338999855173766876289739999666877877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~KdR~a~~~i~~a~~~G~~~~v~~~s~Gn~g~a~A~aaa~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~ 160 (386)
T d1v8za1 81 HKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRT 160 (386)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 64168999999876528831675225226999999999976986430344115544179999998649827994687430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~ 240 (386)
T d1v8za1 161 LKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV 240 (386)
T ss_dssp HHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 88889989999986056654214544574336133310013544537888998628989889977887178899998764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~v~iigvep~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 320 (386)
T d1v8za1 241 NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYV 320 (386)
T ss_dssp TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEE
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf 23670599970576643355532000357655551021001068777603443222221245530577888754854999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~VtD~E~~~a~~~La~~EGI~~~~~sa~alA~a~kla~~~~~~~~VV~iltG~G~kD~~~~~~~~g 386 (386)
T d1v8za1 321 TVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSG 386 (386)
T ss_dssp EEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTSCTTCEEEEEECBBSGGGHHHHHHHHC
T ss_pred EECHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCC
T ss_conf 989999999999999965993566799999999998787199897999968885212999998539
|
| >d1muwa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces olivochromogenes [TaxId: 1963]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Streptomyces olivochromogenes [TaxId: 1963]
Probab=100.00 E-value=0 Score=29112.28 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~~~~rF~~~~Wt~~~~g~dpFG~~tr~~~~~~d~~~~~~~lG~~~~~fHd~D~~P~~~~~~e~~~~~~~i~~~l~~ 80 (386)
T d1muwa_ 1 SYQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDA 80 (386)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99898445335886205765879999888999898999999998599879747775688899867889999999999985
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Gl~~~~~t~nlf~~p~~~~Ga~tspD~~vR~~Ai~~~k~aiDia~~LGa~~vv~W~G~~G~~~~~~~d~~~~~~~l~e~ 160 (386)
T d1muwa_ 81 TGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEA 160 (386)
T ss_dssp HTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 29701134156410200113787792999999999999999999998399848984787755677667999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~v~dya~~~g~~v~~~IEpkP~EP~~~~~~~t~~~al~~l~~~g~~~~~glnlD~gHa~~ag~~~~~~ia~a~~~grL 240 (386)
T d1muwa_ 161 FDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKL 240 (386)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf 99999999972999369982057887553310769999999997299531346644465330477715899999873867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~vhlNd~~~~~~D~DL~fG~~~~~~~~~~~~~L~~~Gy~G~~~FD~k~~R~~~~~~~~~~~~~~m~~~a~~~~~a~~~~ 320 (386)
T d1muwa_ 241 FHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGYEGPRHFDFKPPRTEDIDGVWASAAGCMRNYLILKERAAAFR 320 (386)
T ss_dssp CCCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHHHTCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34211533477743456676401789999999999559988330540367788766799999999999999999999865
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~d~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~e~Le~l~~~~l~g~r 386 (386)
T d1muwa_ 321 ADPEVQEALRASRLDELAQPTAADGVQELLADRTAFEDFDVDAAAARGMAFERLDQLAMDHLLGAR 386 (386)
T ss_dssp HCHHHHHHHHHTTHHHHTSCSCTTCHHHHHHCGGGTTTCCHHHHHHSCCCHHHHHHHHHHHHHTCC
T ss_pred HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 499999999986554113544445256677776520013813343255029999999999971379
|
| >d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 7, HDAC7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29111.61 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~Tg~vyd~~~l~H~~~~g~~~~HPE~p~Rl~~i~~~L~~~gl~~~~~~~~p~~a~~~~L~~vH~~~YI~~l~~~~~ 80 (386)
T d3c10a1 1 TLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPL 80 (386)
T ss_dssp CCTTCEEEECCGGGGGCCCTTCCGGGCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTT
T ss_pred CCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCHH
T ss_conf 99887799977788557899999899897989999999999966996578376789899999988299999999862605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~Aa~~aaG~~~~a~~~v~~~~~~~afa~~rppGHHA~~~ 160 (386)
T d3c10a1 81 SRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHS 160 (386)
T ss_dssp CSCCCCHHHHHHHHHC---CBCTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCCTTCBTT
T ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43112233321034555420367777666888645761089999998457888776542376544441244323545655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~GFC~fNdvAiaa~~l~~~~~~~rV~iiD~DvHhGnGTq~if~~~~~V~~~SiH~~~~~~~~p~tG~~~e~G~g~g~g 240 (386)
T d3c10a1 161 TAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEG 240 (386)
T ss_dssp BCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECTTTTSTTCCCCTTCCCCGGGTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66873433288999999986214677437742467887604676425543354333566545678889887638877766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~n~pl~~~l~~~~~d~~yl~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D~~pLg~l~lt~~~~~~~~~~l~~~~~~~ 320 (386)
T d3c10a1 241 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 320 (386)
T ss_dssp CEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 64456410136799983999999999999999866998899968825334675356367558999999999999873998
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------C 112 (807)
=
T Consensus 321 vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~w~~~~~ 386 (386)
T d3c10a1 321 VVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQR 386 (386)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHHHTCCCCGGGCSGGGSCCCHHHHHHHHHHHHHHTTTCGGGCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 799968888865899999999999838999987841013588888999999999999886076329
|
| >d1v5da_ a.102.1.2 (A:) Chitosanase {Bacillus sp., strain k17 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Chitosanase species: Bacillus sp., strain k17 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29110.61 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~pfp~~~~y~~~~~~~~~~q~~~~~~~~~~y~~wk~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~t~SEGqgYGM 80 (386)
T d1v5da_ 1 AKEMKPFPQQVNYAGVIKPNHVTQESLNASVRSYYDNWKKKYLKNDLSSLPGGYYVKGEITGDADGFKPLGTSEGQGYGM 80 (386)
T ss_dssp CCCSSCSCCCCCCTTCCCCCSSCHHHHHHHHHHHHHHHHHHHEECCCTTSTTCCEECCCCCCCBTTBCCCEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHH
T ss_conf 98788898753536774888667899999999999999999853367777764001465556788898753005888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~Av~~~~~~~nd~~~Fd~lw~wt~~~l~~~~~~L~aW~~~~~~~~v~d~nsAtDgDl~iA~ALl~A~~~Wg~~~~~~Y~ 160 (386)
T d1v5da_ 81 IITVLMAGYDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYL 160 (386)
T ss_dssp HHHHHTBTTBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99998476775619999999999999860679998668857999877799988768999999999999774885178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~A~~ii~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~~~~fa~~~~d~~W~~v~~~~~~ll~~~~~~~~~~tG 240 (386)
T d1v5da_ 161 KEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTG 240 (386)
T ss_dssp HHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999998750578887426888788898755831054999999997458972999999999999998763188768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 L~PDw~~~~~~~~~~~~~~~~~~~~~~~~ydA~Rvpl~la~d~~w~g~~~a~~~~~~~~~f~~~~~~~~~~~i~~~y~l~ 320 (386)
T d1v5da_ 241 LISDFVVKNPPQPAPKDFLDESEYTNAYYYNASRVPLRIVMDYAMYGEKRSKVISDKVSSWIQNKTNGNPSKIVDGYQLN 320 (386)
T ss_dssp CCCSSEETTTTEECCTTGGGSCTTTTSBCTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTCGGGCCSCBCTT
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99631212786767765677777888724119999999998886427804789999999999986147976556632147
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------------C 112 (807)
=
T Consensus 321 G~~~~~~~~~~~~a~~~~aa~~~~~~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~lsGn~~~p~p 386 (386)
T d1v5da_ 321 GSNIGSYPTAVFVSPFIAASITSSNNQKWVNSGWDWMKNKRERYFSDSYNLLTMLFITGNWWKPVP 386 (386)
T ss_dssp SCBCCCSCCHHHHHHHHHTTTTCGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 742688875899999999862873169999998733357778857999999999997388888998
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=100.00 E-value=0 Score=29048.91 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (385)
T d1ejxc2 1 GIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQPDALREQV 80 (385)
T ss_dssp EEEEEEECSCTTHHHHHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSSHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999866973663686688877777573888899999998655078331052116669868999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~AGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfvedT~~a~~gRtiH~~H~EGaGGGHAPDii~~~~ 160 (385)
T d1ejxc2 81 AAGVIGLKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACA 160 (385)
T ss_dssp HHTCSEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEESSTTSTTSSSTTTGGGGGG
T ss_pred HHHHCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHC
T ss_conf 71132144775235675899999876754183589760535400200214887579730332025677786631567624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~nvlpsSTnPT~P~t~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTiaAEdvLhD~GaiSi~sSDsQaMGRvGE 240 (385)
T d1ejxc2 161 HPNILPSSTNPTLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGE 240 (385)
T ss_dssp CTTEEEEEESTTSSCBTTHHHHHHHHHHHC----------CHHHHHHSCHHHHHHHHHHHHTTSSCEEECCTTSSSCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 68535789998878866736764772332046898875677664233530123267776345743442153332576774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 vi~RtwqtA~kmk~~rG~l~~d~~~~DN~RvkRYIAKYTINPAIahGIsh~VGMFGA~G~A~~~tSvtFVSqaAid~gi~ 320 (385)
T d1ejxc2 241 VILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGMFGALGSARHHCRLTFLSQAAAANGVA 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHHHHTHHHHHHTTCTTTSSCGGGSHHHHHHHCEEEECHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEECHHHHHCCCH
T ss_conf 11020787999987603687777777624777666662368188768455135323456555457138856888867684
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~LgL~K~lvpVkn~R~ItK~DM~~Nda~P~IeVDPeTYeV~aDGelltcePA~~LPLAQRYFLF 385 (385)
T d1ejxc2 321 ERLNLRSAIAVVKGCRTVQKADMVHNSLQPNITVDAQTYEVRVDGELITSEPADVLPMAQRYFLF 385 (385)
T ss_dssp HHTTCCSEEEECCCTTTCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSSCSSSTTTCCC
T ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 77388760686148887787786015789982789997689989999046765667631110176
|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Lactaldehyde reductase FucO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29041.49 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 m~~~~~~~~~~~fG~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~ 80 (385)
T d1rrma_ 1 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 80 (385)
T ss_dssp CCEEEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred CCCEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 99526669972798689999999999769997999989655658089999999987598599986826997989999886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse~t~~avi~~~~~~~ 160 (385)
T d1rrma_ 81 GVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR 160 (385)
T ss_dssp HHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTCSEEEEEETTTTE
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 54303588889866988422699999999638753026665043222478774674366544643234442224444331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 K~~~~~~~~~P~~~i~Dp~l~~~~P~~~~a~~g~Dal~h~~E~~~s~~~~p~~~~~a~~a~~~~~~~l~~~~~~~~~~~~ 240 (385)
T d1rrma_ 161 KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE 240 (385)
T ss_dssp EEEEECGGGCCSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EEEEEEEECCCCCCCCHHHHHCCCCHHEEEECHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 01355420135322006777327980126400364664112111113320001277899999999752432000056899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~a~~~ag~~~~~~~~g~~hai~~~l~~~~~i~HG~a~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 320 (385)
T d1rrma_ 241 EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARN 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999976651676400053203200233457510001436889987335269999999998388656999899999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~i~~i~~~~~~lglP~~L~d~Gv~~~~l~~ia~~a~~~~~~~~nP~~~t~~di~~il~~a~~g~ 385 (385)
T d1rrma_ 321 AAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAWEGG 385 (385)
T ss_dssp HHHHHHHHHHHHTTCCSSGGGGTCCGGGHHHHHHHHHTCGGGGGCSSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999859999988829899999999999985720059994389999999999997489
|
| >d1xmxa_ c.52.1.26 (A:) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Restriction endonuclease-like superfamily: Restriction endonuclease-like family: Hypothetical protein VC1899 domain: Hypothetical protein VC1899 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=29039.95 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~m~~hv~~i~~~~~~n~~p~l~~~~~p~~~v~i~t~~~~~~~e~L~~~lk~~~i~~e~~~i~~~~d~~~I~~~l~~~~~ 80 (385)
T d1xmxa_ 1 NAMAIHVGIIDQDPVRLVTPLLDHRTVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGSNTSAIKSAIRELAE 80 (385)
T ss_dssp CTTEEEEEECCSSCHHHHHHHHSTTCCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 96289999963772435568654788886699996743699999999999846986168745875576999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~v~lN~TGGTK~Msl~ay~~~r~~~~~~~Y~d~~~~rl~~l~~~~~~~~~~~~~i~i~d~l~~~~~~~~~~~~ 160 (385)
T d1xmxa_ 81 TLKARGEEVKFNASCGLRHRLLSAYEVFRSYHWPIFVVEPNSDCLCWLYPEGNNDTQVQDRITIADYLTIFGARGEFNEH 160 (385)
T ss_dssp HHHHHTCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEECTTTCEEEEEESTTSCCEECCCCCCHHHHHHHTTCEEECC--
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCC
T ss_conf 62203873999916766888999999998559846999769966999667767675577878899999984033000566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~el~~~l~~ln~~~~~~~~~~~~~~~~s~~~~~~~~~~~ll~~l~~~~~~~~~~~~l~F 240 (385)
T d1xmxa_ 161 QLSPQLDQQLYQLGERWASNALELGPGLATLNYLATTCRKEQKLDVELSDKQQGYRELNLLLSDLVEAKIASYENGILTF 240 (385)
T ss_dssp --CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSEEECCHHHHTCHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf 68866789999999998634776767999999986512212010244462244536788999988753432214863231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~a~~Fl~G~WLE~yv~~~l~~~~~~~~~~~d~~~~v~i~~~~~~~~~~nElDv~~~~~~~l~~IECKt~~~~~~~~~ 320 (385)
T d1xmxa_ 241 INEEARRFANGEWLETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVNNKLHIIECKTKGMRDDGDD 320 (385)
T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEESSCCCC-CCC
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 41778743588089999999999877540445026767798326888765532689999799999999568887754578
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~l~kl~~l~~~lgG~~~r~~LVs~~~~~~~~~~ra~~~~i~vI~~~~l~~l~~~L~~w~~~~~~~ 385 (385)
T d1xmxa_ 321 TLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKTHLTQWFKAAGGN 385 (385)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEEESSCCCHHHHHHHHHHTCEEECGGGGGGHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999998289532499999058847799999866949983888899999999999973799
|
| >d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHH phosphoesterases superfamily: DHH phosphoesterases family: Exonuclease RecJ domain: Exonuclease RecJ species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29039.35 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~l~~m~~A~~~i~~ai~~~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip~R~~eGyGl~~~~i~~~~~~ 80 (385)
T d1ir6a_ 1 PLALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEA 80 (385)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECCCTTTSCSSCCGGGHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf 97676735899999999999977997999927786067999999999998899759987786656998689999998533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~LiItvD~G~~~~e~i~~~~~~gi~vIv~DHH~~~~~~~~~~iv~~~~~~~~~~~~~gaGva~~l~~~l~~~~~~~~~~ 160 (385)
T d1ir6a_ 81 SDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPL 160 (385)
T ss_dssp CSEEEESSCCTTCGGGHHHHTTSCCEEEEECCSCCCSSCCSSEEECGGGSTTCCCCCCHHHHHHHHHHHHHHTTTCCCCG
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 77699823652203667667632872321465465657401212157678850101302578999999886432442202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~l~L~aiGtiaD~~pL~~eNR~lv~~gl~~~~~~~~~g~~~L~~~~~~~~~~~di~f~i~P~iNA~GRl~~a~~a~~lL 240 (385)
T d1ir6a_ 161 EYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLL 240 (385)
T ss_dssp GGHHHHHHHHHHTTCCCSSHHHHHHHHHHHHCTTCSCHHHHHHHHHTTCCSCSHHHHHTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 44455456455455401367889987777785114558899997542213201221111131113334444310212444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~a~~~a~~l~~~N~~Rk~~~~~i~~~a~~~~~~~~~~i~~~~~~~~~GviGivAsrl~~~~~kP~iv~~~~kGS 320 (385)
T d1ir6a_ 241 LTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGT 320 (385)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTSSSEEEECTTCCHHHHHHHHHHHHHHHCSCEEEEETTEEE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEE
T ss_conf 41236789999999887777899999999999875430335159995377662022045899999729978999667387
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~Rs~~g~~l~~~l~~~~~~l~~~GGH~~AaG~~i~~~~~~~F~~~l~~~~~~~~~~~~~~~~~d~ 385 (385)
T d1ir6a_ 321 VRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREVALLDL 385 (385)
T ss_dssp EECCSSCCHHHHHHTTGGGCSEEEECSSEEEEECCGGGHHHHHHHHHHHHHSSCCTTTTCCSTTC
T ss_pred EECCCCCCHHHHHHHHHCHHHCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
T ss_conf 76899978999999874530137991670467974989999999999999856353220442479
|
| >d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Ovalbumin species: Hen (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29038.31 Aligned_cols=1 Identities=0% Similarity=-1.292 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~l~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~ 80 (385)
T d1uhga_ 1 GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVH 80 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
T ss_conf 96789999999999999861396986998889999999999986775899999997388877664301444203388999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~l~v~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~i~~~ 160 (385)
T d1uhga_ 81 SSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNV 160 (385)
T ss_dssp HHHHHHHHHHTSCCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999963899873699998888866765448899999987097334564311799999999999998706886566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~~~~l~~~t~l~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~~~~~~v~Lpy~~~~~s 240 (385)
T d1uhga_ 161 LQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMS 240 (385)
T ss_dssp SCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTSSEE
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEECCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf 78667896544114542799542046664555540664258994353002001021234545566817887132489758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 m~iilP~~~~~l~~~~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~adfs~is~~~~ 320 (385)
T d1uhga_ 241 MLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSSSANLSGISSAES 320 (385)
T ss_dssp EEEEEESSTTCHHHHHHHCCHHHHHHHTSTTTCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGSTTCCCTTTBCSTT
T ss_pred EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEHHHHHHHCCCCHHHCCCCCCCCCCCCCC
T ss_conf 99997776676155554213556999763430424599997104876311007998875598111068787656779998
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
=
T Consensus 321 l~vs~i~q~~~i~v~E~Gt~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 385 (385)
T d1uhga_ 321 LKISQAVHAAHAEINEAGREVVGSAEAGVDAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP 385 (385)
T ss_dssp CCEEEEEEEEEEEECSCEEECCCHHHHHHHHTTCCCEEECCSCEEEEEEETTTCCEEEEEEESCC
T ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 06552788999998998713010120001367899779913999999998999968999994398
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29035.46 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLse~~~~~VLvLEaG~~~~~~~~~~~~~~~~~~~~~~~~dw~~~t 80 (385)
T d1cf3a1 1 GIEASLLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYET 80 (385)
T ss_dssp CHHHHSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEEESSCCCTTSCHHHHBGGGTTTTTTSTTBCCEEC
T ss_pred CCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 96605218912126996889998968899999999987879829998889998787832048767755218978768605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~r~~~~~~G~~lGGsS~in~~~~~R~~~~d~d~w~~~~~~~gw~~~~l~Pyf~k~E~~~~~~~~~~~~~~~~~~ 160 (385)
T d1cf3a1 81 VELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNA 160 (385)
T ss_dssp CCCTTTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCG
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 57677894365221002466512331353215866611210036878676336688999887610787311221122355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~d~n~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~nl 240 (385)
T d1cf3a1 161 SCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL 240 (385)
T ss_dssp GGSCSSSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTGGGTTCTTE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCC
T ss_conf 55677543334565545556878999999999769997677555665533223332322333223556533732107743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~i~t~~~V~rI~~~~~~~~~ra~GV~~~~~~g~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~ 320 (385)
T d1cf3a1 241 QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPV 320 (385)
T ss_dssp EEEESCEEEEEEEECSSSSCEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCT
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCEEEECCCHHHCHHHHHHCCCCCHHHHHHCCCCEEEECCC
T ss_conf 33377368888871899654799999986899789999688899868535499999865998378998779986998974
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 g~~~~~~~~~~~vv~~~~~v~g~~~lr~v~~s~~p~~~~~~~~~~~~~~a~~~~d~i~~~~~~~~ 385 (385)
T d1cf3a1 321 GLCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ 385 (385)
T ss_dssp TCTCBSCGGGTCSBCTTSBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04206887766614665542660571742575786212675148799985366789998775449
|
| >d2c5wb1 e.3.1.1 (B:266-650) Penicillin-binding protein 1a, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 1a, transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29034.03 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~yp~~~d~~~~e~i~~~~~~~~~~~~~~G~~I~tTiD~~lQ~~~e~~~~~~~~~~~~~~~~~~a~vv~d~~TG~IlA~v 80 (385)
T d2c5wb1 1 SNYPAYMDNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQL 80 (385)
T ss_dssp CCSCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHCSSSCCCSCSSCEEEEEEEETTTCBEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 99748999999999998777644232069987994789999999999997534312678663289999988999399999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~yaaAle~g~~~~~~~~~~d~~~~~~~~~~~~~n~~~~~~G~itl~~al 160 (385)
T d2c5wb1 81 GARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYAL 160 (385)
T ss_dssp CCSSCCCCCTTCCCTTTCCCSCCGGGHHHHHTHHHHHHTTSCSBSSCEEEESSCBCTTSSCBCCCTTSCCCEEEEHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
T ss_conf 55655544434543201143467740447899999986497002331123454211136866422465565136650333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~S~N~~~~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~tplqla~aya~iAngG~~~~P~~i~~i 240 (385)
T d2c5wb1 161 QQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKV 240 (385)
T ss_dssp HTTCHHHHHHHHHHHCHHHHHHHHHTTTCBCSSCCGGGGSCCCCSSCCSSBSCCHHHHHHHHHHHHTTSEEECCBSEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 31655300345666403368999997087545653223445441135885256899999988765147643221430122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~d~~~~~~~~~~~~~~v~s~~~a~~~~~~m~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~WFv 320 (385)
T d2c5wb1 241 VFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFA 320 (385)
T ss_dssp EETTSCEEECCCCEEECSCHHHHHHHHHHHHHHHHHSTTGGGCCTTCCCEEEEEECCCCHHHHHHTCCCSSCEESCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 12344422123455420477888888764110135775221356565313565565666665444435564222205999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
-
T Consensus 321 G~~P~~~~~Vwvg~~~~~~~~~~~G~~~Aapi~~~im~~~~~~~~~~~f~~P~gi~~~g~~~~~~ 385 (385)
T d2c5wb1 321 GYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIPEGLYRNGEFVFKN 385 (385)
T ss_dssp EECSSEEEEEEEECSSTTSCEEGGGGGHHHHHHHHHHHHHHSSSCCCCCCCCTTEEEETTEEEEC
T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC
T ss_conf 55998899999940788887688722889999999999997269977799999867767089529
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=100.00 E-value=0 Score=29035.01 Aligned_cols=1 Identities=0% Similarity=-0.196 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~ 80 (385)
T d2b9va2 1 HDPLSVQTGSDIPASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMRE 80 (385)
T ss_dssp CCTTTCCCSCSCC---------CCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99754345777786665887667797686889989999889999997189996018999816788876556775322354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~ 160 (385)
T d2b9va2 81 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGF 160 (385)
T ss_dssp HSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHH
T ss_pred CCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
T ss_conf 43057999996896899976774368898512045210011220155787799999999856674446410045667899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~a~~~~~~l~a~~~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (385)
T d2b9va2 161 TVVMALLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFAT 240 (385)
T ss_dssp HHHHHHTSCCTTEEEEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
T ss_conf 99999854677634999812456532101234773011210899986541014586411114678889987252445320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~p~~~~~~~~p~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~~~g~~~~~~~l~~~~~~~~~~LiiGPw~ 320 (385)
T d2b9va2 241 QAGLDQYPFWQRMHAHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQEDMWGAIHAWQALKDADVKAPNTLVMGPWR 320 (385)
T ss_dssp HTTGGGCHHHHHHHHCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSCSSHHHHHHHHHHHTTCSSCEEEEEESCC
T ss_pred HCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 10442134566530376543122315846888633556762899841368765433789999875156888579993776
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
=
T Consensus 321 H~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~WFD~~LKG~~~~~~~p~v~~~~~G~~~Wr~~~~W 385 (385)
T d2b9va2 321 HSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPGSASVHLPDAIIYNTGDQKWDYYRSW 385 (385)
T ss_dssp TTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 77866566666664567520013689999999999708999999999879998789827418979
|
| >d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp175a1 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29033.39 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~dp~~~~~~~~~kyg~v~~~~~~~p~v~v~dp~~v~~il~~~~~~~~~~~~~~~~~~~G~gl~ 80 (385)
T d1n97a_ 1 MKRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLL 80 (385)
T ss_dssp CEECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEECCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
T ss_conf 98888553538799987799999999999789789996998799989999999997289977688607779998579500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~g~~wk~~R~~l~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~vdl~~~l~~~~~~vi~~~~fg~~~~~~~~~~~~~~ 160 (385)
T d1n97a_ 81 TDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKA 160 (385)
T ss_dssp TCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 37979999999997234144432231025778999987650455335788888875520255553465432015666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~ 240 (385)
T d1n97a_ 161 LDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHR 240 (385)
T ss_dssp HHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 56777777666665455899999986515678899887511104697889999999988765024211211025676541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 P~v~~~l~~E~~~~~a~i~EtlRl~p~~~~~~r~~~~d~~~~g~~i~~g~~v~~~~~~~~~~~~~dp~~F~PeRf~~~~~ 320 (385)
T d1n97a_ 241 PDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEAFRPERFLEERG 320 (385)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHHSSTTTTSCCTTHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 02333333333332101201122333332212233322233333333333333332210011478876638432376567
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~p~~~~~~r~r~ 385 (385)
T d1n97a_ 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPRE 385 (385)
T ss_dssp CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCEEESSSEEETTCCEECCBC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCEEEEEEC
T ss_conf 88887067899765690399999999999999998378896898732460578646981788609
|
| >d2ix0a4 b.40.4.16 (A:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exoribonuclease 2, RNB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29039.60 Aligned_cols=1 Identities=100% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 e~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisie~~~~~~~~l~VHIADva~~v~~~s~Ld~~A~~R~~S~ 80 (385)
T d2ix0a4 1 EAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTN 80 (385)
T ss_dssp SCCCCCCCCCCCCCCCCEECTTSCCBEEECSSCCCCCEEEEEEEEGGGEEEEEEEECCGGGTSCTTSHHHHHHHHHCBCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCE
T ss_conf 99875431001467874208899989976999942665589999689919999998777887598999999999968838
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~l~~~g~i~~~~~~~~s~I~s~~~ltY~~v~~~l~~~~~~~~~~~~ 160 (385)
T d2ix0a4 81 YLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEA 160 (385)
T ss_dssp EETTEEECSSCHHHHHTTSSCCTTCEEEEEEEEEEECTTCCBCSCCEEEEEEEECCCEEEHHHHHHHHTTCSSCCCSSHH
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH
T ss_conf 89999778898166420014566532047778999856761401336876789726757499999997403334532022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~l~~L~~~~~~lr~~R~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~lieE~MilaN~~va~~l~~~~~~~i 240 (385)
T d2ix0a4 161 IAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGI 240 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCCCEEEEEECTTSCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 59999999999999999874167621343022010244455413787404088888888887766899999997348873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~R~~~~p~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~a~ys~~~~~H~gLgl~~Y 320 (385)
T d2ix0a4 241 YNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAY 320 (385)
T ss_dssp EEEBCCSCGGGHHHHHHHHHHTTCCCCTTGGGSHHHHHHHHHHHHHSSSSHHHHHTGGGCCCCEEESSCCCBTTTTBSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
T ss_conf 22222357477899999999710366855334625677776520355416789999998643103798877413084612
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------------C 112 (807)
=
T Consensus 321 thfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~ei~~~~~~~~~~a~~aer~~~~~~~~~~lk~~ 385 (385)
T d2ix0a4 321 ATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDK 385 (385)
T ss_dssp BCCSCTTTBHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 01586776377899999999997699999889999999999999999999999999999985789
|
| >d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28967.30 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~~T~~vh~G~~~~~~~gav~pPI~~sst~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEgg~~a~~~sSGMaAi~~ 80 (384)
T d1cs1a_ 1 RKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHL 80 (384)
T ss_dssp CCHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf 97404214689898888998259844888746089776568743189887899999999998299706884372799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~i 160 (384)
T d1cs1a_ 81 VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHL 160 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHH
T ss_pred HHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHH
T ss_conf 98631445550013465200246665421122333222356788799986216666279971456653010457887554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~g~~~vVDNT~atP~~~~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~ 240 (384)
T d1cs1a_ 161 AREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLL 240 (384)
T ss_dssp HHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 54148679971553474546664468889998063003667774443345782665420011221122024500389996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 rgL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~~~~a~~f~~~L~l~~ 320 (384)
T d1cs1a_ 241 RGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFT 320 (384)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCE
T ss_conf 12111478998999999999996445886446641223301489998750689861268752466999999998389155
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlEd~eDLi~Dl~~AL~aa~~g 384 (384)
T d1cs1a_ 321 LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG 384 (384)
T ss_dssp EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 5626687540430661015100799999866989296999865099999999999999986079
|
| >d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Aerolisin/ETX pore-forming domain superfamily: Aerolisin/ETX pore-forming domain family: (Pro)aerolysin, pore-forming lobe domain: (Pro)aerolysin, pore-forming lobe species: Aeromonas hydrophila [TaxId: 644]
Probab=100.00 E-value=0 Score=28967.12 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ip~~~~~~~~~~d~~~~~~~~v~~~~~fi~pls~LAh~LGY~W~gg~~~q~Vged~~~~r~gd~w~~~~~n~g~c~gyrc 80 (384)
T d3c0na2 1 IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRC 80 (384)
T ss_dssp CCCCCCEEECSCCHHHHHHHHHTCTTTTHHHHHHHHHHHTBSCCSCTTCSSTTCSEEEEECSSSEEEEECCCSCCCSTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCEECCCCEEEECCCEEEEECCCCCCCCCEEE
T ss_conf 98654411389987887888762870011569999865073677677874114452566438767996256899774451
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~er~ki~~~nf~~~i~~~~f~~G~~~v~~~epi~t~s~~a~N~sDt~qt~itvt~~~t~T~TWSkT~s~~~s~sV~ik~s 160 (384)
T d3c0na2 81 GDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDSDTPQSGYDVTLRGDTATNWSKTNTYGLSEKVTTKNK 160 (384)
T ss_dssp TSCCEEEEEEEEEEEEEEEEEECCCSEEEEEEEEEEEEEEEECSSSCBCCEEEEEEEEEEEEEEECCSSSGGGTCBCSSC
T ss_pred CCCCEEEEEEEEEEECCCCEECCCCEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_conf 56215898756778657644427818844542899999997389886158899999998423898654778889999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 f~iPligeteisvs~S~n~s~s~s~t~S~T~T~t~s~~VtVPP~Skv~V~i~l~rs~idVPYt~t~~I~Ydv~~~gFLRw 240 (384)
T d3c0na2 161 FKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRW 240 (384)
T ss_dssp EECCCCSSSCCCCEECTTSCGGGCCEEEEEEEECCEECCCBCTTEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEBCT
T ss_pred EECCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_conf 85663514469999976788850675137899888876301898359999999866873556899999998987116741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 gGNa~~~hp~~Rpt~~~tf~~g~~~~~~~~i~yq~d~r~ipg~~~~wdW~w~~~~~g~~~m~~~~~~~~R~~~s~isG~f 320 (384)
T d3c0na2 241 GGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDF 320 (384)
T ss_dssp TCCCBTTCCSSCCEEEEEEEESSCCCSTTCHHHHHHTTTCGGGCSSBCHHHHHHHHCHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 56213448988886426886057888743411243202357876511364155553567777777664222346434217
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~a~sq~~g~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 384 (384)
T d3c0na2 321 SAESQFAGNIEIGAPVPLAADSKVRRARSVDGAGQGLRLEIPLDAQELSGLGFNNVSLSVTPAA 384 (384)
T ss_dssp EEEEEEECCCEECCCEEC-----------------CCEEECCCCHHHHHHHTCEEEEEEEEECC
T ss_pred EEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECC
T ss_conf 8850211015524711158068642346664467863897347977886367674389976389
|
| >d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylococcus capsulatus [TaxId: 414]
Probab=100.00 E-value=0 Score=28965.34 Aligned_cols=1 Identities=100% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~a~~~~~~~~~r~~~~~~~p~~rr~seYE~vT~~~qp~p~~~~~~~~~~~W~~~~~~g~p~y~~ 80 (384)
T d1mtyb_ 1 ERRRGLTDPEMAAVILKALPEAPLDGNNKMGYFVTPRWKRLTEYEALTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGN 80 (384)
T ss_dssp CCCCTTTCHHHHHHHHHHCCSSCSCSCCCTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCG
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 98667998778899861277886667776424467577896643510227889956617767647764613899998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~Tal~~~DW~~frDP~q~~yrtY~~~qae~e~~v~~~~d~~~~~~~~~~l~~~w~~~~L~~~l~p~r~~E~ga~~~~a~ 160 (384)
T d1mtyb_ 81 ETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDEFINRYWGAFLFNEYGLFNAHSQ 160 (384)
T ss_dssp GGCSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGSCHHHHHTTTTTHHHHHHHHHHHHHHTTHH
T ss_pred CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 64313447746535801889999999999999999999999996696211999999999999860240799999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~r~~~g~~i~~a~~fqa~DeLR~aQ~i~~~~~~L~~~~pgf~~~~~~~k~~W~~dp~wQg~R~~vE~~l~~~~Dw~E~~ 240 (384)
T d1mtyb_ 161 GAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEGLWQEVFDWNESA 240 (384)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCSTTHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 98646868999999998766888999999999999874789862337998886048065779999998987114499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 vA~Nlv~dpll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~l~~dpe~~~~Nr~llq~Wi~~W~ 320 (384)
T d1mtyb_ 241 FSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPEFSDYNRTVMRNWTGKWL 320 (384)
T ss_dssp HHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99876488644899999999999997698047999999998999999899999999984585332668999999999999
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~a~~Al~~~~pi~s~~p~~~~~~~~~~a~~~rv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (384)
T d1mtyb_ 321 EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLAGLK 384 (384)
T ss_dssp HHHHHHHHHHGGGGGGSCTTSCCHHHHHHHHHHHHHHHHHHTGGGGTCCCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 9999999987687610677878889999999999987653024103665458899999972369
|
| >d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) species: Amycolatopsis mediterranei [TaxId: 33910]
Probab=100.00 E-value=0 Score=28960.90 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~g~~v~~fE~~~a~~~g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p 80 (384)
T d1b9ha_ 1 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVP 80 (384)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 98989898887999999999999739946568989999999999997969399967889999999998499988989981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ 160 (384)
T d1b9ha_ 81 AFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAH 160 (384)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEC
T ss_conf 43223221222222233211233444435665441020023332222333322233443110222333356553104033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aai 240 (384)
T d1b9ha_ 161 GARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASV 240 (384)
T ss_dssp TCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHH
T ss_pred CCCCCCEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 60048983675520000024555434433431243224999998899985689876666432312356632235301213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~~qL~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~y~ 320 (384)
T d1b9ha_ 241 LRAQLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR 320 (384)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 33343211321123433446666664225666443222222222333310001000222599999999987998553072
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
-
T Consensus 321 plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~~ 384 (384)
T d1b9ha_ 321 AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA 384 (384)
T ss_dssp CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 2213978885488744433344679899999839798647999998999999999999999609
|
| >d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitin ABC lyase I species: Proteus vulgaris [TaxId: 585]
Probab=100.00 E-value=0 Score=28959.36 Aligned_cols=1 Identities=100% Similarity=0.702 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~p~~~~T~~~~~~~d~ir~R~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ng~~~g~pi~~~~~~ 80 (384)
T d1hn0a1 1 EPEIQFHNVKPQLPVTPENLAAIDLIRQRLINEFVGGEKETNLALEENISKLKSDFDALNIHTLANGGTQGRHLITDKQI 80 (384)
T ss_dssp CCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHSSCCCTTCCCCCCHHHHHHHHHTTCCEECTTSCEECCCEECTTGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98777677899888896788899999999999872688652157777899999999985686456874247755562012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~aY~~~g~~~~~~el~~~i~~~~d~l~dQg~~~gS~~~~~nww~~~i 160 (384)
T d1hn0a1 81 IIYQPENLNSQDKQLFDNYVILGNYTTLMFNISRAYVLEKDPTQKAQLKQMYLLMTKHLLDQGFVKGSALVTTHHWGYSS 160 (384)
T ss_dssp GGGCGGGSCHHHHHHHTTSEEHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCSTTCCCSCCTTHHHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHH
T ss_conf 20577676533344431266899999999999999747887322399999999999999872320378777673112238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 r~~~~a~~Lm~d~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~n~D~~~t~~~~~l~~~Ll~~d~~e~i~~l~~l~ 240 (384)
T d1hn0a1 161 RWWYISTLLMSDALKEANLQTQVYDSLLWYSREFKSSFDMKVSADSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNTFS 240 (384)
T ss_dssp HHHHHHHHHTHHHHHHTTCHHHHHHHHHHHGGGGHHHHTCCCCTTTTCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 77988999987753226789999999987446864245676677850378999999999999985599199999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~~~~~vt~G~~dGfk~DGS~~qH~~~Y~gYg~~~l~~~~~~~~ll~gT~f~~~~~~~~~l~~~l~~~~~~~~~~~~ 320 (384)
T d1hn0a1 241 HYITGALTQVPPGGKDGLRPDGTAWRHEGNYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKAMVSAWIYSNPEVG 320 (384)
T ss_dssp HHHHHHHHSCCSTTCSEECTTSCEEETTEECHHHHHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHHHTBSSBBC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99887750478887886457887550678774269999999999999967998767989999999999999998454466
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~GR~p~~~~~~~~~~~a~~~~al~g~~~~D~~~A~~ylrl~~~~~~~~~~~~~~~~~pa~~ 384 (384)
T d1hn0a1 321 LPLAGRHPFNSPSLKSVAQGYYWLAMSAKSSPDKTLASIYLAISDKTQNESTAIFGETITPASL 384 (384)
T ss_dssp GGGCTTCTTSCCBGGGGHHHHHHHHTTSTTSCCHHHHHHHHHHHTCCHHHHHHHHSSCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 5555777899875543189999997078866799999999987347785416676158787879
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=100.00 E-value=0 Score=28957.65 Aligned_cols=1 Identities=0% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
=
T Consensus 1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~~ 80 (384)
T d2fvka2 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLIL 80 (384)
T ss_dssp CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEEC
T ss_pred CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 92538757788999987610329999999980895599989999999997899999999999999734850206578987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~el~~~~~~~~~~~~Gv~~~k~f~~~~~~~~~~~~l~~~l~~~~~~g~~v~~H~Ed~~~~~~~~~~~~~~ 160 (384)
T d2fvka2 81 FQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQ 160 (384)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTTTBCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
T ss_conf 57787661277877678888705575441213325522344779999999999754982451322078898887777655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~~~~~~~rP~~aE~~av~r~~~la~~~g~~lhi~HiSt~~~ve~I~~ak~~G~~Vt~Et~ph~L~l~~~~~~~~~~ 240 (384)
T d2fvka2 161 GLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHH 240 (384)
T ss_dssp TCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSCCCHHHHHHHHHHHHHTCCEEEEECHHHHHCCGGGGSCC--
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHHCCCCC
T ss_conf 98774332454453213678999999887519607722335612367899853049978998376776146301024442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~IaSDHaP~~~~eK~~~~~~~~~ 320 (384)
T d2fvka2 241 GEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRA 320 (384)
T ss_dssp ------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSEECCCBCCCBSSCCSSTTBGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCC
T ss_conf 22111223333222122223554310137516976999987789999977447964279627888788883355333333
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~df~~ap~G~~gle~~lpll~~~~v~~~~~~sl~~lv~~~s~nPAki~Gl~p~KGs 384 (384)
T d2fvka2 321 FDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGS 384 (384)
T ss_dssp EEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 3433345676310999974599899999999986489899999999996999999499998998
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=0 Score=28960.41 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~pi~~~f~D~~l~~~~~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~ 80 (384)
T d2omza2 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD 80 (384)
T ss_dssp CSCCCCSSCEEHHHHSCSHHHHHHHHHHTTCSSTTSEECHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 97652589998331320889999999986777778863988957878998999898776242458999989681881798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 160 (384)
T d2omza2 81 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 160 (384)
T ss_dssp CGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86334771101030134333222211123343334433222222222222222211213466313100232222112222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l 240 (384)
T d2omza2 161 FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 240 (384)
T ss_dssp EEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGC
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCC
T ss_conf 21232201111245421101122243332110022353233303577447878644457787888877777896134325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~ 320 (384)
T d2omza2 241 TNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCC
T ss_conf 65341004467447877535546687754567445787732356522223323233333221000024676777788778
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~l~~l~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 321 DISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 384 (384)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCC
T ss_conf 9845366898898989899899974670899999898979958998000039999996397895
|
| >d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: ArgJ-like domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) species: Streptomyces clavuligerus [TaxId: 1901]
Probab=100.00 E-value=0 Score=28889.62 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 sPkGf~~~~~~aGiK~~~r~DL~li~~~~~~~~AgvFT~N~~~AApV~~~r~~l~~~~~ravvvNSGnANA~TG~~G~~~ 80 (383)
T d1vz6a_ 1 TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEEN 80 (383)
T ss_dssp CCTTEEEEEECCCSSTTCCCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTTTSBCCEEEEEEEECCCSCHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHH
T ss_conf 99859999999536679998689999579976999973687530151998987526884299995374111115888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~~~~~~A~~l~i~~~~Vl~aSTGVIG~~Lp~~kI~~~i~~l~~~l~~~~~~~AA~AImTTDt~pK~~~i~~~~~~i~G 160 (383)
T d1vz6a_ 81 AREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTRPKEVRVSVGGATLVG 160 (383)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSSBCHHHHHHHTCSSCSSCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf 99999876553045753145512420101464113344332112232343366544453066420258999720424777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 iaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~l~~~v~~sFN~ItVDGDtSTNDtv~~lAnG~~~~~~~~~f~~aL~~v 240 (383)
T d1vz6a_ 161 IAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAGEFEEALHTA 240 (383)
T ss_dssp EEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred EEECCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 86014320555452478999615567688999999864145000654588887758999845875321078777778899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~LA~~Iv~DGEGATK~i~v~V~gA~s~~dA~~iAr~ia~S~LVKtA~~G~DpNWGRI~aAiG~~~~~~~~d~~~i~i~ 320 (383)
T d1vz6a_ 241 ALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIR 320 (383)
T ss_dssp HHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEEE
T ss_conf 99999998636533225899998058999999999999752299998873458847777766423567766662425999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~v~~~g~~~~~~~~~~~~~~~~~m~~~ei~I~vdL~~G~~~~~~wtcDLt~~YV~INad 383 (383)
T d1vz6a_ 321 FGEVEVYPPKARGDQADDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE 383 (383)
T ss_dssp ETTEEEECC-------CHHHHHHHHHHTTSSEEEEEEECCSSSEEEEEEEECCCHHHHHHHHC
T ss_pred ECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCHHCCCCC
T ss_conf 899999963667887733559999987457848999997888922899907698322102689
|
| >d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylosinus trichosporium [TaxId: 426]
Probab=100.00 E-value=0 Score=28889.18 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~r~~~~f~~p~~rr~seYE~vt~~~Qp~p~~~~~~~~~~~W~~~f~~G~~~y~~~~ 80 (383)
T d1mhyb_ 1 KRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKPLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNES 80 (383)
T ss_dssp CCTTTCHHHHHHHHHHSCSSCSCCCCSTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 99999745888998616788666677656657868789554444202677985651355654783042079999987553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Tai~~~DW~afrDP~q~~yr~Yv~~qaeqe~~v~~~~d~~~~~~~~~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a~i~ 160 (383)
T d1mhyb_ 81 TELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVG 160 (383)
T ss_dssp CSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 00143663654580088899999989999999999999999669620089999999999986131089999998889998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 r~a~~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~gf~~~~~~~k~~W~~dp~WQ~~R~~vE~~lva~~Dw~E~~vA 240 (383)
T d1mhyb_ 161 RDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWA 240 (383)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCGGGHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 64675899999999988788899999999999877468987056899889844886899999999887317659999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~NlV~e~ll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~R~~~w~~alvk~~l~~d~e~~~~Nr~~lq~Wi~~W~~~ 320 (383)
T d1mhyb_ 241 GHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLAS 320 (383)
T ss_dssp HHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98879986589999999999999759705699999999899999999999999998469522155899999999999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
.
T Consensus 321 a~~A~~~l~pi~~~~p~~~~~~~~~~~~~a~~rv~~~~~~~~a~~i~~~~~~~~~~~~~~~~~ 383 (383)
T d1mhyb_ 321 SVAALKDFVGLYAKVEKVAGATDSAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGY 383 (383)
T ss_dssp HHHHHHHHGGGGGGSCCCTTTTSHHHHHHHHHHHHHHHHHHTHHHHTCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 999999867876047754431105789999999999885433154176546999999986469
|
| >d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Ammonium transporter superfamily: Ammonium transporter family: Ammonium transporter domain: Ammonium transporter AmtB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28888.14 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~d~~d~~~~l~~~~lV~~m~~~Gf~lle~G~vr~kn~~~~~~k~~~~~~~~~i~~~~~Gy~lafg~~~~~~g~~~~~~ 80 (383)
T d1u7ga_ 1 AVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLASGEGNNFFGNINWLM 80 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCSSSCCCSTTGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHH
T ss_conf 97576459999999999999999999998611144889999999999999999886034867868489988677750542
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~fq~~Fa~~a~~IvsGavaeR~~~~~~~i~~~~~~~~vy~~~~hwvw~~g~l~~lG~~Dfa 160 (383)
T d1u7ga_ 81 LKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFPAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGALDFA 160 (383)
T ss_dssp GTTCCTTCEETTEEHHHHHHHHHHHHHHHHHHHHHHHGGGBCHHHHHHHHHHHHHHTHHHHHHHHHSSCHHHHHTCCCSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHEECCCCCCCCCCCEECC
T ss_conf 15765321222211567757633133310231103334665026753045676502156587420488753357863016
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Gs~vVH~~gG~~aL~~~~~lgpR~~~~~~~~~~~~~~~~~lG~~iLw~gW~gFN~gs~~~~~~~~~~~~~nt~~a~a~~~ 240 (383)
T d1u7ga_ 161 GGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAI 240 (383)
T ss_dssp CTTTTHHHHHHHHHHHHHHSCCCCCTTCSSCCGGGHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74366404209899888753875445656565678146667899999999873445435520588999998776788999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~k~~~~~~~nG~LaGLVaita~~~~v~p~~A~~iG~i~g~i~~~~~~~l~~~~~iDD~~~~~~vHg~~G 320 (383)
T d1u7ga_ 241 LGWIFGEWALRGLPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCG 320 (383)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHH
T ss_conf 99999998735987799999886545540246755346156899886210778899999986601366465670321368
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
-
T Consensus 321 i~G~l~~glfa~~~~~g~~~~~~~~~~~ql~~Ql~g~~v~~~~~~~~~~ii~~il~~~~gLRV 383 (383)
T d1u7ga_ 321 IVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRV 383 (383)
T ss_dssp HHHHHHHHHHTSGGGTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999988998267444665654541268999999999999999999999999999984728769
|
| >d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28887.97 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~i~~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g 80 (383)
T d1bs0a_ 1 SWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG 80 (383)
T ss_dssp CHHHHHHHHHHHCCGGGCCCCCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 95799999999999819971112457888876998996899987653026678989999999999983898876553467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~lE~~LA~~~g~e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~ 160 (383)
T d1bs0a_ 81 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARL 160 (383)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEECCHHHHHHHHH
T ss_conf 40689999999987519983588604422467778760699866885045528776342357875257340578899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~~~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~ 240 (383)
T d1bs0a_ 161 LASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS 240 (383)
T ss_dssp HHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC
T ss_pred HCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 41457774499965787877723315679999886491998303123210377664558771774211245212233465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Gg~v~~~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~~s~Ii 320 (383)
T d1bs0a_ 241 GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQ 320 (383)
T ss_dssp CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSSBC
T ss_pred CCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 54200321677899860446664244320689999999999985025788888888899998788755986579998879
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~v~~g~~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~g 383 (383)
T d1bs0a_ 321 PLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG 383 (383)
T ss_dssp CEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 999799999999999999789149897489789998459998677799999999999998649
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28885.54 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~r~~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~ 80 (383)
T d1bo1a_ 1 KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGID 80 (383)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEEECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC
T ss_conf 94410238999999737988875228996000371003445897347777886779887079983799999999981989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~ 160 (383)
T d1bo1a_ 81 DQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDG 160 (383)
T ss_dssp HHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
T ss_conf 89999972788654345657767867880699689998579999999999899999998607875787634303787479
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~ 240 (383)
T d1bo1a_ 161 VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQ 240 (383)
T ss_dssp EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 52799998424567765103676158632567675334555204656778764688230799999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
T d1bo1a_ 241 LKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKS 320 (383)
T ss_dssp HTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC-----------------------------------CCSCCTTTSTTE
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78675043675512211112211001124555444555564322345789788302221553346644577765445445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~~IS~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 321 HESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp EECSSTTEEEEEEECCSCC------------------CCCSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 678997599999999715779689999999999211889896127989999999999998649
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28884.74 Aligned_cols=1 Identities=0% Similarity=0.737 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~ 80 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEV 80 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECCCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHCCCCCEECCCC
T ss_conf 98998978899999999986899789993499874506688778982895776696798769999999859962222676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
T d2v5za1 81 ERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLA 160 (383)
T ss_dssp SEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 63477347643223444200011444554899999999866430011321013455544667999998704626778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~i~~~~~v~~I~~~~~~v 240 (383)
T d2v5za1 161 TLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENV 240 (383)
T ss_dssp HHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEEESCCEEEEECSSSSE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCEE
T ss_conf 87654220246302467889999886132212333246762133144154999999987598499368606899609969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~v~~~~g~~~~ad~vI~a~p~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~ 320 (383)
T d2v5za1 241 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 320 (383)
T ss_dssp EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHH
T ss_pred EEEECCCCEEECCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHH
T ss_conf 99988997898799998989899951824899999999999975447754401354408768668556653466775067
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
-
T Consensus 321 ga~~~g~~~a~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~P~~p~~~~~i~~~~ 383 (383)
T d2v5za1 321 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCGGGSSCCCCCCSSSCCCCCCCCHHHHHCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 899987999999999862588044302484224655454545605224999987403167779
|
| >d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Pigment epithelium-derived factor, PEDF species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28882.48 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~L~~~l~~~~~~~Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~ 80 (383)
T d1imva_ 1 TGALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISS 80 (383)
T ss_dssp CCCCCCCCSHHHHSHHHHHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
T ss_conf 99866554754458289999999999999999985129698199888999999999998647399999999738999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~l~~~n~i~v~~~~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~ 160 (383)
T d1imva_ 81 PDIHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARS 160 (383)
T ss_dssp SCHHHHHHHHHHHHTSTTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECCSCHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999998750067763677877886168741668888887623764664354479999999999985075620364
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~t~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vv~lp~~~~~sm~ 240 (383)
T d1imva_ 161 TKEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSII 240 (383)
T ss_dssp CSCCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEE
T ss_pred CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 33438665124311104423202556533454464234798479830211245514566516655389994137973899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 iiLP~~~~~~l~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dL~~~L~~lGl~~~F~~adfs~is~~~l~vs~ 320 (383)
T d1imva_ 241 FFLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFDSPDFSKITGKPIKLTQ 320 (383)
T ss_dssp EEEESSCCSCCHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHTTTTTHHHHSCCCTTTCSSCCCEEE
T ss_pred EEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECEEEEEEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEE
T ss_conf 99962667886787664068899998750642279995021887540246675431343330345674556799947445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
=
T Consensus 321 v~hka~ieVdE~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P~~~ 383 (383)
T d1imva_ 321 VEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGP 383 (383)
T ss_dssp EEEEEEEEECSCEEECC--------CCCCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred EEEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 789999999888611132222101567899679911999999999999968999995289997
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=28880.44 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
T ss_conf 96979995787689999999999828998999826876555300133566677776541133332235541799784568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78866666224012043232443222223222233134554442232001110477533333332222334433222222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 22123357899988886676799999999998599779971230515676666555666510027999999986103454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred CCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEHHHHHHH
T ss_conf 20123333037835873785546899747856888999999999986402221111346753899689996359999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
.
T Consensus 321 i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~~ 383 (383)
T d1gy8a_ 321 ARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA 383 (383)
T ss_dssp HHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC
T ss_pred HHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999869997648899999986785357899999879966787999999999999986800489
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28878.83 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~P~GL~N~GNtCY~NSvLQ~L~~ip~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~p~~~~~~l~ 80 (383)
T d2ayna1 1 MELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 80 (383)
T ss_dssp CCCCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHCSEECCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 98995858898406999999999766999999985145315777645277999999999999865898457799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~QqDa~Ef~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~~~~~c~~c 160 (383)
T d2ayna1 81 MAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTES 160 (383)
T ss_dssp HHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------CCHHHHHTCEEEEEEEEESSS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCC
T ss_conf 97376502555672245439999998788999998753203644211101211124667872054022899988883578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~l~L~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~ 240 (383)
T d2ayna1 161 EEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 240 (383)
T ss_dssp CCCCCBCCEEEESSEEEECSSSCCBHHHHHHHTTEECCCCEETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSC
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCCCE
T ss_conf 96551002231323210221010013456665201100124532376401202346502341453410220120567621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~K~~~~v~fp~~ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L 320 (383)
T d2ayna1 241 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDL 320 (383)
T ss_dssp CBCCCCCBCCSEEECGGGBCHHHHHHTTTTTGGGTCTTC----------------------CCCCCSCTTTTCCCSEEEE
T ss_pred EECCCEECCCCEEECHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 33584774687664432146033013321024554432211013667554434542222236533344446789951999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------9
Q 003615 112 --------------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~avi~H~G~s~~~GHY~a~vk~~~~~W~~~nD~~V~~v~~~~v~~~~~~~~~~~aYiLfY~r~ 383 (383)
T d2ayna1 321 QAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 383 (383)
T ss_dssp EEEEEEESSSTTSSEEEEEEEEETTEEEEEBTTBCCCBCHHHHGGGGSSSSSCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEECHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 999999789999977089999999928999899508937999977527998893699999879
|
| >d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative methionine aminotransferase YdbL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28806.86 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~ 80 (382)
T d1u08a_ 1 PLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLY 80 (382)
T ss_dssp CCCCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98824547799986999999996269978854988999778999999999985599889898677999999999999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (382)
T d1u08a_ 81 GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERT 160 (382)
T ss_dssp SCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTE
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99988772378646358889998751035640599731443213455443133200012214335689999731213574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~R 240 (382)
T d1u08a_ 161 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWK 240 (382)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGC
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 08998798765454565332012332210243202430320210343345542000123468579985035521478665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 iG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~ 320 (382)
T d1u08a_ 241 VGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLV 320 (382)
T ss_dssp CEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEE
T ss_pred CHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEE
T ss_conf 11010210137888752022323456433322333222206777789999876300002232037857956894679989
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~l 382 (382)
T d1u08a_ 321 DYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 382 (382)
T ss_dssp ECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTTC
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 56888999999999999997999998224527899989889999809999999999998179
|
| >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28805.64 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 80 (382)
T d1b5pa_ 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEK 80 (382)
T ss_dssp CCCCCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93788999848988899999999999967998289999989999889999999999865886899987889999999764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (382)
T d1b5pa_ 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRA 160 (382)
T ss_dssp HHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTT
T ss_pred HHHHCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 44303411265534056778999999999967997989987998477999999845847998554101458999999973
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 240 (382)
T d1b5pa_ 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG 240 (382)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG
T ss_pred CCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCHHHCCCCCEEEEECCHHHCCCCH
T ss_conf 78897699989997976600799999999999998590899976641232178988887818997799946346451807
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lR~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg 320 (382)
T d1b5pa_ 241 WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGA 320 (382)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBT
T ss_pred HHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
T ss_conf 56699998999999999998750357653222222222233121157899999999862267898876449767568941
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~~~L 382 (382)
T d1b5pa_ 321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382 (382)
T ss_dssp TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 79968578999999999999997897999572258999699997499999999999999869
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=0 Score=28804.00 Aligned_cols=1 Identities=0% Similarity=-0.992 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (382)
T d1wkva1 1 ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGE 80 (382)
T ss_dssp CEEEGGGGTTHHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTT
T ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCC
T ss_conf 96421015677775324278999999986035030579975478999999844553556776531166526210489854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~l~~~~~~~PTPLvrl~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA 160 (382)
T d1wkva1 81 MVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALS 160 (382)
T ss_dssp CEESSHHHHHHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTTCEEEEECCHHHHHHHH
T ss_pred EEECCHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 67579899856899998777877888898999985478999876299999999999985268999999858759999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~~~~~~~q~~N~~~~~~h~~ttg~E 240 (382)
T d1wkva1 161 AVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTARE 240 (382)
T ss_dssp HHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCHHH
T ss_conf 99998499779996200112222222356861154375105679999876520245754332345430232112112178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 I~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep~~~~~i~g~~~i~~g~~~~~~~d~~~~i~~Vsd~ 320 (382)
T d1wkva1 241 IFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLE 320 (382)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHHHSCCCCEEEEECHH
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
T ss_conf 99996467873167897416654233320101231876623675244444445641024576575646644299997999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
=
T Consensus 321 Eai~a~r~La~~EGI~vgpSSGaavaaa~k~a~~~~~~~~~vVvIlcD~G~rYlstiyN~~~ 382 (382)
T d1wkva1 321 EAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 382 (382)
T ss_dssp HHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
T ss_conf 99999999999819888189999999999998640689998999988897432676426789
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=100.00 E-value=0 Score=28803.56 Aligned_cols=1 Identities=0% Similarity=-1.955 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~W~~~~v~Y~i~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~ 80 (382)
T d1ea9c3 1 FQPPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNH 80 (382)
T ss_dssp CCCCTHHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSS
T ss_pred CCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 97986023886999971220379988786676434555777676678189999985699986799889969770178877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1ea9c3 81 KYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIP 160 (382)
T ss_dssp TTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87754453544366777899999999986264378763013441348325556406876544430013464432235763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~~~e~~~~~~~ 240 (382)
T d1ea9c3 161 TYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESSI 240 (382)
T ss_dssp SBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 22233344345742301388999999987515653146678743620076566545666554008981588543145532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~ 320 (382)
T d1ea9c3 241 WLEGDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVL 320 (382)
T ss_dssp TTTTTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 13676432212343004667655046421567899999999854020654405520367666312246787999999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~l~~pG~P~Iy~G~E~g~~~~~~~~~r~~~~w~~~~~~~~l~~~~~~L~~lR~~~paL~~G 382 (382)
T d1ea9c3 321 FQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRTG 382 (382)
T ss_dssp HHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHHHC
T ss_pred HHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCC
T ss_conf 99971798787755754888999977648878877765389999999999999568975189
|
| >d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28805.56 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~l~~PGP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~ 80 (382)
T d2bkwa1 1 KSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS 80 (382)
T ss_dssp CCCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98656427899788799999727326897769999999999999999985334898719999386899999999998876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~ 160 (382)
T d2bkwa1 81 KAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQA 160 (382)
T ss_dssp TCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHH
T ss_pred CCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHH
T ss_conf 07998248997312334434311100133333223677775641579998630110100232112246302441233332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (382)
T d2bkwa1 161 IKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT 240 (382)
T ss_dssp HHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 01334310256302455322123233557569950566667689750255405999864331035888663011122100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~ 320 (382)
T d2bkwa1 241 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVY 320 (382)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEE
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEC
T ss_conf 23311345556535677577789999999999876324557999999999999764115532234683011587379970
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~~ 382 (382)
T d2bkwa1 321 VADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 382 (382)
T ss_dssp CSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHHCCEEEECCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89989999999978939977877311699899858868997999999999999999997739
|
| >d1t1ua1 c.43.1.3 (A:20-401) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Choline O-acetyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=28807.25 Aligned_cols=1 Identities=100% Similarity=0.702 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 e~~LP~LPvP~L~~Tl~ryL~s~~Pl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~~R 80 (382)
T d1t1ua1 1 ELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNR 80 (382)
T ss_dssp CTTSCCCCCCCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTTCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
T ss_conf 99998899999999999999985445999999999999999751698179999999987446878607778765016788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~pL~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~~~~~plcM~qy~~lF~t~RiP~~~~ 160 (382)
T d1t1ua1 81 LALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQ 160 (382)
T ss_dssp SCHHHHTCCEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTSSSCCSSSCCCCTTGGGTTTEEEECCSSS
T ss_pred CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCEECCCCCC
T ss_conf 78650056612105666876037999999999999999999756656861210224898667899998728670568998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 D~l~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~~~~l~~~ei~~~l~~I~~~~~~~~~~~~~ig~LT~~~Rd~Wa~~r~~ 240 (382)
T d1t1ua1 161 DTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTV 240 (382)
T ss_dssp CEEEECCCSSSSCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHTCSTTCCCCGGGGGGSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCEEEEEECCEEEEEEEEECCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74665576778898779999899899999998990688999999999999624455556888450555871999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 L~~~~~N~~~L~~Ie~alfvv~LDd~~~~~~~e~~~~~~~l~g~~~~~~~~NRW~DKslq~IV~~nG~~g~~~EHS~~DG 320 (382)
T d1t1ua1 241 LLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDG 320 (382)
T ss_dssp HTTSHHHHHHHHHHHTCSCEEEECCCCSSCCCHHHHHHHHHHTTSTTTTTTSCCTTBSEEEEECTTSCEEEEECSTTCCH
T ss_pred HHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCH
T ss_conf 85596158999999866489992799988701689999986178778998610677873799978986898504676249
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~dl 382 (382)
T d1t1ua1 321 IVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNL 382 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCSSSCSCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998640677888887778999658788658899999999999999997349
|
| >d1xl7a1 c.43.1.3 (A:11-392) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Peroxisomal carnitine O-octanoyltransferase, COT species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=28808.69 Aligned_cols=1 Identities=100% Similarity=1.234 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 e~Tf~~q~~LP~LPvP~Le~Tl~ryL~s~~pl~~~~e~~~t~~~v~~F~~~~G~~Lq~~L~e~a~~~~NWl~~~W~~~~Y 80 (382)
T d1xl7a1 1 ERTFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWLEEWWLNVAY 80 (382)
T ss_dssp CCTTTTGGGCCCCCCCCHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSSHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 96431427799898999899999999986566999999999999999974939999999998740698850587867753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 L~~R~pl~~~~n~~~~~~~~~~~~~~~~~~q~~raA~l~~~~~~f~~~l~~~~l~~~~~~~~plcm~qy~~lF~t~RiPg 160 (382)
T d1xl7a1 81 LDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQLLRREKLPVHKSGNTPLDMNQFRMLFSTCKVPG 160 (382)
T ss_dssp TSCCSCHHHHTCEEEECGGGGTTCCCCTTCHHHHHHHHHHHHHHHHHHHHTTCSCCCEETTEECCCGGGGGTSSEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHCCCEECCC
T ss_conf 25577864555666766556777885500699999999999999998740365471230998760799997612771689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~D~~~~~~~~~~~~~~~~HIvVl~~g~~ykv~v~~~~~~~s~~el~~~l~~I~~~~~~~~~~~~vg~LTt~~Rd~WA~ 240 (382)
T d1xl7a1 161 ITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERTRWAK 240 (382)
T ss_dssp SSCCEEEECCCCTTTCCCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHHTSCCCCCGGGGGGSCHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98772002355556789886699997893089999329908889999999999997354678887755067656479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~R~~L~~~~~~N~~~L~~Ie~AlfvvcLD~~~~~~~~e~~~~~~~~~l~G~~~NRW~DKs~q~IV~~nG~~G~~~EHS~~ 320 (382)
T d1xl7a1 241 AREYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCDHAPY 320 (382)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSSCEEEECCCCCCCCSSCCHHHHHHHHSSCGGGCCTTBSCEEEECTTSCEEEEECSSSC
T ss_pred HHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
T ss_conf 99997617842699999987446888613568889858999999963859873327766713899689888987368716
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
-
T Consensus 321 DG~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~A~~~~~k~as 382 (382)
T d1xl7a1 321 DAMVMVNIAHYVDERVLETEGRWKGSEKVRDIPLPEELVFTVDEKILNDVSQAKAQHLKAAS 382 (382)
T ss_dssp CTHHHHHHHHHHHHHHHHTTTCCCSCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 69999999999999976127878888887789997577896698999999999999998509
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=28804.33 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~P~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~ 80 (382)
T d1j0ha3 1 DLFEAPDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPS 80 (382)
T ss_dssp GSCCCCGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 98899964107779999755312799887766665345557766766785899999867999976998899698876876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1j0ha3 81 NHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56877565643278879979999999986423643787752102333344312220368745557742224566545663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1j0ha3 161 PNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDAM 240 (382)
T ss_dssp CSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 23332356777764440769999999998886766441157984453216645534444433202898522343234512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~ 320 (382)
T d1j0ha3 241 PWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLF 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34213554410155310456654303543201221022210113654467662320467777741213488599999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~lllt~pG~P~iy~G~E~G~~~~~~~~~r~~~~W~~~~~~~~l~~~~k~L~~lR~~~paL~r 382 (382)
T d1j0ha3 321 LFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSLRR 382 (382)
T ss_dssp HHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 99998179888986863286899880103577888654576999999999999842997586
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=100.00 E-value=0 Score=28803.73 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~P~w~~~~viY~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~ 80 (382)
T d1wzla3 1 VFTTPEWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPS 80 (382)
T ss_dssp SCCCCSGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 97998420288799997024137998778766643344566655777785899999831999977997899798677875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1wzla3 81 HHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45776556320236788788999999999752451576321013333333331001037654246643003654566789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1wzla3 161 TNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHDAS 240 (382)
T ss_dssp CSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 74444344556678507799999999999999999758875034334335645556789998752884478620035652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~a~ 320 (382)
T d1wzla3 241 GWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAV 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHH
T ss_conf 02203342023302677899986514764314678888753201643245663123058775536765389799999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------9
Q 003615 112 -------------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~llt~pG~P~iy~G~E~g~~g~~~~~~r~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL~r 382 (382)
T d1wzla3 321 LFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASLTR 382 (382)
T ss_dssp HHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 99998089878973730277899995445788988655570899999999999830986488
|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=28732.40 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~~~~~~i 80 (381)
T d3bvua3 1 CQDVVQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHI 80 (381)
T ss_dssp CCCSSSCCCCCSEEHHHHHHHCCCCCCCCSSSTTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHHHTHHHH
T ss_pred CCHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 94366405766622687886521538999716677512205421476788379993877888002375999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~~l~~l~~~p~~~F~~~~~~~~~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~ 160 (381)
T d3bvua3 81 LSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLK 160 (381)
T ss_dssp HHHHHHHHHHCTTCCEEECCHHHHHHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999879997799835389999999749999999999998798799687121463457997999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~fG~~p~~~w~~D~FGhs~~lp~il~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~ 240 (381)
T d3bvua3 161 QFMNVTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYD 240 (381)
T ss_dssp HHHCCCCCEEEECSSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSS
T ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 97599973589638887657789999856988699974135542005201466504304666899880457516555668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~p~~~~~d~~~~~~f~f~~~~~~~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w 320 (381)
T d3bvua3 241 IPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEW 320 (381)
T ss_dssp GGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHH
T ss_conf 85567887211345442123455777876668766625589999999999999986216887389816668787761037
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~n~~kli~~iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~~ 381 (381)
T d3bvua3 321 DVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRS 381 (381)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSST
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 7888769999999971888881899889999999999987524778877678876788899
|
| >d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28730.06 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~l~~~~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l 80 (381)
T d1by7a_ 1 EDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGAAADKIHSSFRSLSSAI 80 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTCCG-GGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 90778999999999999873098985998789999999999986664999999997089987888999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~t 160 (381)
T d1by7a_ 81 NASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDT 160 (381)
T ss_dssp C------CEEEEEEEEEETTSCBCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSCTTSSCTTSCCTTC
T ss_pred HCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 56798847866000000368732889999999861773020443212599999999999975247754567855679731
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~~~~~~~~~~~~~~v~lp~~~~~~m~iilp~~~~~ 240 (381)
T d1by7a_ 161 RMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIAD 240 (381)
T ss_dssp CEEEEEEEEECCCBSSCCEECC---EEEEEETTEEEEECEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEESSCCS
T ss_pred HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 75611244774211578752356555333689805899516651555543136767499996147970799996277665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGi~~~F~~~~Adfs~is~~~~l~vs~i 320 (381)
T d1by7a_ 241 VSTGLELLESEITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERNDLFLSEV 320 (381)
T ss_dssp SSSSCHHHHHHCCHHHHHHHTSTTTEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTBSCSCCCCCEE
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEE
T ss_conf 35666776642258899987512114340489965648997550569999856851120445454445678898157667
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~q~~~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 381 (381)
T d1by7a_ 321 FHQAMVDVNEEGTEAAAGTGGVMTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP 381 (381)
T ss_dssp EEEEEEEECSCBC-----------------CCEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 8889999878842023133200003568999879933998999999999978999994398
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=100.00 E-value=0 Score=28728.50 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~p~~~~lvd~~At~~tk~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~sdv~~~tG~yPAv~G~D~~~~~~~~~~ 80 (381)
T d1odza_ 1 VKPVTVKLVDSQATMETRSLFAFMQEQRRHSIMFGHQHETTQGLTITRTDGTQSDTFNAVGDFAAVYGWDTLSIVAPKAE 80 (381)
T ss_dssp CCCEECCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTCCSSCSCCSSSCCHHHHHHSSCCSEEEEEGGGTSTTCTT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCH
T ss_conf 98877620597779999999999998648966983355444564436665306667640377744201200135687321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~ 160 (381)
T d1odza_ 81 GDIVAQVKKAYARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGR 160 (381)
T ss_dssp CCCHHHHHHHHHTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 44999999999779959998730788987777641577643135667504899703699999999999999975540388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~vPVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG 240 (381)
T d1odza_ 161 LIPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLG 240 (381)
T ss_dssp BCCEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEEC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 76289964210479865667889998999999999999998715986189986478787776444201089988677888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~~l~~~~~~A~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~~~i~y~~~W~ 320 (381)
T d1odza_ 241 FDTYGPVADNADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDAREIAFLLVWR 320 (381)
T ss_dssp CEEEECSSSCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTGGGCSEEEECC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 63557888753589999999999999998559951663036667711026765426999999997282222443899985
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
-
T Consensus 321 N~~~~~~~~~~~~~~~~~~p~p~~~~~g~~~~~dF~~f~~~~~~lf~~dlp~ly~~p~~~~ 381 (381)
T d1odza_ 321 NAPQGVPGPNGTQVPHYWVPANRPENINNGTLEDFQAFYADEFTAFNRDIEQVYQRPTLIV 381 (381)
T ss_dssp CCTTCEEC--CCEECCCCSCCSSHHHHHTSHHHHHHHHHHSTTEECGGGCCSCSCCCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHCCCCCC
T ss_conf 6766556666677763336777634457642899999976960113444807551677779
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28727.05 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~e~p~~~tedfgFk~l~~~~~~~~~~d~lP~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~ 80 (381)
T d1xipa_ 1 ASSLKDEVPTETSEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTF 80 (381)
T ss_dssp CCEECCCCCEEEESSCEEEEEEEEECSCCCTTCCCSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCC
T ss_pred CCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCCC
T ss_conf 97546667816646530587166212789544589644426899577788999889977999989978786556788862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~ip~v~~vafs~d~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~ 160 (381)
T d1xipa_ 81 KWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQL 160 (381)
T ss_dssp SEEEECTTEEEEEEETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EECCCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 34168998689986189899995897899985100145446554556111021886069996589778999415864444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~~~~~~~ed~ 240 (381)
T d1xipa_ 161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDE 240 (381)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSS
T ss_pred CCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC
T ss_conf 47752387338926999968968999818982036567788201578867786166899951756999987776666767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~ii~~~~~~~~f~~~~Di~~pfgs~~R~p~y~~~~l~~w~~~~~~l~iv~Ss~s~di~vl~~~~~~~~~~D~~ 320 (381)
T d1xipa_ 241 VSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSE 320 (381)
T ss_dssp CCCCEEEEEEEEETTEEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEECSSSEEEESSGGG
T ss_pred CCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCC
T ss_conf 76433799982699983035256566776566667517999830056567868999556763456861367489812675
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
.
T Consensus 321 Ra~lP~~~~~d~Dt~piGlalD~ss~~~v~~p~~g~~~~~plP~l~vL~~~G~L~~ww~~~ 381 (381)
T d1xipa_ 321 RAVLPISEETDKDTNPIGVAVDVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFH 381 (381)
T ss_dssp CCBCCBCTTTCCBCCEEEEEEECSCCC--------------CCEEEEEETTSEEEEEEEEC
T ss_pred CEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEC
T ss_conf 3040357788876531589997124752315788822278998899996987899999879
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=100.00 E-value=0 Score=28729.96 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 slVVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~ 80 (381)
T d2bo4a1 1 SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN 80 (381)
T ss_dssp CEEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf 98999727885889999999997589814999986999875999999852300113321001110023546578848899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g~y~R~~~~grvt~~l~~pll~~l~~~~~~~~i~d 160 (381)
T d2bo4a1 81 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ 160 (381)
T ss_dssp HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSC
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999997088888999758767677999999999876305758986314567882236755899999860201565054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~ 240 (381)
T d2bo4a1 161 PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ 240 (381)
T ss_dssp TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 77610104099999862434556567866244999999985974784478778777899999999999999987782363
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (381)
T d2bo4a1 241 HEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAAT 320 (381)
T ss_dssp TCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHGGGSCHHHHHHHHHTTTSCCCTTCCHHHHHHH
T ss_pred CEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 33322012022557445888888752047999999999755777999998569988888987444664778767999999
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T d2bo4a1 321 YHVLLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQQYLYRMLGRYRYQAALEN 381 (381)
T ss_dssp HHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999997301460688871056889999999999976079899999999877787876249
|
| >d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystine C-S lyase C-des species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=0 Score=28725.66 Aligned_cols=1 Identities=0% Similarity=-0.461 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~fp~l~~~~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~ 80 (381)
T d1elua_ 1 QFPGLANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGC 80 (381)
T ss_dssp CCGGGTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH
T ss_conf 99878988895697636899999999999999865278765315679999999999999998397945199978858986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~ 160 (381)
T d1elua_ 81 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQ 160 (381)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCC
T ss_pred HHCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 21000233247853899546541132011122334542222322233333205899998640233222123333456531
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~~~~~ 240 (381)
T d1elua_ 161 VLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWR 240 (381)
T ss_dssp BCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 10035788987520345321022344334554442212222333333454422122305677741888986396100244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 320 (381)
T d1elua_ 241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA 320 (381)
T ss_dssp TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 54433333443344432222333223204555433001588744421101456667899998875089769647887653
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~edid~ll~~l~e~~~ 381 (381)
T d1elua_ 321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLADFGP 381 (381)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1899983898899999999996896898668999799955788999999999999996691
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=100.00 E-value=0 Score=28726.69 Aligned_cols=1 Identities=0% Similarity=-0.362 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~p~~~~~~~~~~~~~~~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~ 80 (381)
T d1mpxa2 1 TSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAG 80 (381)
T ss_dssp CCTTSCSSCSSCCCCCCTTCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98989999998777776555866988999899998999999996899973089997567789765656665444320068
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~ 160 (381)
T d1mpxa2 81 DDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMA 160 (381)
T ss_dssp GHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 99999689799998137657889853315201210132006789999999998753588576504560365778889888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~~~~l~a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (381)
T d1mpxa2 161 LTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLE 240 (381)
T ss_dssp HTSCCTTEEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGG
T ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
T ss_conf 75356521043232454252010243468335322289998642110366112110135677787525654424023144
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGPw~H~~~ 320 (381)
T d1mpxa2 241 QLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQV 320 (381)
T ss_dssp GSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGG
T ss_pred CCHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 46177887527875301232690266652345674389842555775653899999999842666783699936767787
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg~~~~~~~ppV~~~~~G~~~Wr~~~~W 381 (381)
T d1mpxa2 321 NYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRLKAW 381 (381)
T ss_dssp GSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 6677767766665101134689999999999727999999999889997899968407979
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=100.00 E-value=0 Score=28725.95 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2guya2 1 ATPADWRSQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYH 80 (381)
T ss_dssp CCHHHHTTCCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTT
T ss_pred CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99702147829999755211799988877787667647848999999699998779998996988778766688899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2guya2 81 GYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQ 160 (381)
T ss_dssp SCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 75046646655677877899999989886063213100124666545765222334689875431001344445444554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2guya2 161 VEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAGVYCIGEVLDGDPAYTC 240 (381)
T ss_dssp HHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCEEEEEEECCCCCHHHHC
T ss_conf 32023257765510103355889999998765103113555103403754589999764321402563110364075540
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~enHD~~R~~s~~~~~~~~~~a~~~l~t 320 (381)
T d2guya2 241 PYQNVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPRFASYTNDIALAKNVAAFIIL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHSSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 23324444224066799999996267761778999998874067643000101676752210225889999999999998
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
.
T Consensus 321 ~pGiP~iy~G~E~g~~g~~~~~~r~~~~~~~~~~~~~l~~~i~~L~~lR~~~~~~~~~~~~ 381 (381)
T d2guya2 321 NDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381 (381)
T ss_dssp SSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 0897298736002757998811001466556767879999999999997488641699879
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=100.00 E-value=0 Score=28724.25 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gG~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2aaaa2 1 LSAASWRTQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYH 80 (381)
T ss_dssp CCHHHHTTCCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTT
T ss_pred CCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98034488727999838106899998877777767758938999999799999769998994987668765788998875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2aaaa2 81 GYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTM 160 (381)
T ss_dssp SCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56646543311024988999999998866311110023445433456776555333587554345588766456445555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2aaaa2 161 VEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKASGVYCVGEIDNGNPASDC 240 (381)
T ss_dssp HHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 67775678666675313233255667766644204221322000001233307899998744532233530379813321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~a~a~llt 320 (381)
T d2aaaa2 241 PYQKVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPTLLGNFIENHDNPRFAKYTSDYSQAKNVLSYIFL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHCSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 11344333002157899999985487307899999974331157721103435667721041246989999999999997
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~pG~P~iy~G~E~g~~g~~~p~~r~~~~~~~~~~~~~l~~~i~~L~~lRk~~~al~~~~~~ 381 (381)
T d2aaaa2 321 SDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYIT 381 (381)
T ss_dssp SSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
T ss_conf 0797675747214878998834111367677746769999999999997049453279879
|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Probab=100.00 E-value=0 Score=28726.57 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~pi~~~~~~~~Y~~~i~iGtpliiDTGSs~~Wvpc~~c~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~ 80 (381)
T d1t6ex_ 1 LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPC 80 (381)
T ss_dssp CCEEEEEEECTTTCCEEEEEETTEEEEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBC
T ss_pred CCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98798112269988599999769866998998811460678877766562780264235757888887666678778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~~~~~~ 160 (381)
T d1t6ex_ 81 TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKV 160 (381)
T ss_dssp EECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTC
T ss_pred CEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
T ss_conf 60677838998888799999999653223552025885112202435665444667630210588873157887651376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~i~DTGtt~ 240 (381)
T d1t6ex_ 161 ANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPY 240 (381)
T ss_dssp CSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSS
T ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCE
T ss_conf 44899554777654237603656633357833777654157874257888778518846615755456763687427734
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~~~~~i~~~~y~~~ 320 (381)
T d1t6ex_ 241 VLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVD 320 (381)
T ss_dssp EEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEE
T ss_pred EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHEEEE
T ss_conf 97778999999999988751445664211101466677522622565555565431461799975996799770473899
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------9
Q 003615 112 ------------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~~~~~~~~ 381 (381)
T d1t6ex_ 321 VKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp EETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred ECCCCEEEEEEECCCCCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 0798489999832556677888973898979848689999899999999877888887688
|
| >d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28658.84 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~t~~~h~~~~~dp~ga~~~PI~~sstf~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LE~~~~a~~fsSGMaAisal 80 (380)
T d1ibja_ 1 ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 80 (380)
T ss_dssp CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
T ss_conf 97767624279999999896188557766461887766895140898868999999999971986188603199999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~ 160 (380)
T d1ibja_ 81 THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 160 (380)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 98627998799974033554012222110454212235751678877775067618996142443223445899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rg 240 (380)
T d1ibja_ 161 AQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 240 (380)
T ss_dssp TTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf 75980896243004300255455898999606520256667554433344126777787630466773787779999842
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~~a~~f~d~l~l~~~a~ 320 (380)
T d1ibja_ 241 IKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAV 320 (380)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 31445538889888899999997389866996056456864211222456542111111127999999998389175741
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
-
T Consensus 321 SlG~~~SLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlE~~eDLi~Dl~qAl~~l~~ 380 (380)
T d1ibja_ 321 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 380 (380)
T ss_dssp CCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 568766130485223012089999997697939599983409999999999999976689
|
| >d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=28656.57 Aligned_cols=1 Identities=0% Similarity=-0.627 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~f~~~~~~~~~~~~~lvGGK~AnLgel~~~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~ 80 (380)
T d1vbga3 1 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMG 80 (380)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98899879986568814475072889989999978599999888549999999980764658799999999987787633
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~~~ 160 (380)
T d1vbga3 81 ATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEH 160 (380)
T ss_dssp CBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
T ss_conf 22356421011001232034566767787751352488998863231101766555553101100034024567788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~Glg~~v 240 (380)
T d1vbga3 161 MKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVNV 240 (380)
T ss_dssp HHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEEE
T ss_pred HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 88762304543136987566788998876650487422226888887654212102477100156502641330124245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~La~l~~~iE~~yg~P 320 (380)
T d1vbga3 241 QCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKEM 320 (380)
T ss_dssp EECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCCCEETHHHHHHCHHHHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 56663388737667613443444675213322112555545300044366531022238899999999999999981985
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
=
T Consensus 321 qDIEWA~~dg~L~ILQaRPv~~~~~aa~~~~~d~~~~~~i~~~~~~~~~~p~~~~~~l~~ 380 (380)
T d1vbga3 321 QDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHP 380 (380)
T ss_dssp EEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHGGGSCHHHHHHTTSC
T ss_pred CEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCC
T ss_conf 105999989989999744787557879999999988599688999873898577461399
|
| >d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]
Probab=100.00 E-value=0 Score=28653.97 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~LF~P~~ig~~~lkNRiv~~pm~~~~~~~G~p~~~~~~~y~~rA~Ggglii~~~~~V~~~~~~~~~~~~~~~d~~i~ 80 (380)
T d1q45a_ 1 SNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVE 80 (380)
T ss_dssp CCCCTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHTCCTTCEEEEEEEESSTTCCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 98635898118999856875884438883889979999999999998497799974508877757899986217779988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~k~l~~~vh~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~ 160 (380)
T d1q45a_ 81 AWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVED 160 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGSGGGCCCEESSSCCCCTTTCCEECTTSCEECCCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHH
T ss_conf 99999999873576258875307866665545567787666557666677224267755568998843787889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 f~~aA~~A~~aGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~lEii~aIr~~vg~~~~~~~~~~~~d~~~ 240 (380)
T d1q45a_ 161 YCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLD 240 (380)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 99999999982865366000211367654165335576655764231036677779988887015672278752022366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pv~~~Gg~~~~~ 320 (380)
T d1q45a_ 241 ATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKEL 320 (380)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTSSCCSEEEEECCC---------------CHHHHHHHHHHHHSCSCEEEESSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHH
T ss_conf 42133123333210256676653135632477416754433334566567625667889988652488589679989999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
-
T Consensus 321 ae~~l~~G~~DlV~~gR~liaDPdlv~K~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (380)
T d1q45a_ 321 GMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFLAP 380 (380)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSCCCSSTTTTCSCCCCC
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999998699632455299887924999996299988887466458999898577789897
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=28653.95 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~e~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k~~~G 80 (380)
T d2gmha1 1 CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSG 80 (380)
T ss_dssp CCSCCCCCCTTTSCTTSCGGGSSCCCCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 98885335642245335754444574201363888998977899999999985213413999799981788899874535
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gvl~~~~l~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ae~~g~~~~~ 160 (380)
T d2gmha1 81 ACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYP 160 (380)
T ss_dssp CEECTHHHHHHCTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCHHHHHHHCCCHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 16668899987630344355301320012279963366466545670110245551320467888999987631543443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~G~l~k~li~~~~l~~~~~~~~G~~sip 240 (380)
T d2gmha1 161 GYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQGGFQSIP 240 (380)
T ss_dssp TCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCGGGGCC
T ss_pred ECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 01001344225773110122332323334556555643003463799956178866288876542103665545666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~l~~~G~lLVGDAAG~vnP~~g~GI~~Am~SG~lAAeai~~al~~~~~~~~~~~~~~~~y~~~~~~s~~~~eL~~~rn~~ 320 (380)
T d2gmha1 241 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIR 320 (380)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTT
T ss_pred CCCCCCEEEEECCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 34069806873354313512148753220237889999999997188643103444556889987628999999863877
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~g~~~g~~~~~~~~~~~~g~~p~tl~~~~~d~~~l~~~~~~~~i~y~~~d~~~~ 380 (380)
T d2gmha1 321 PSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQIS 380 (380)
T ss_dssp GGGGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSS
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 898752108999999999999857898701789997889988798589998999989169
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=28652.48 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s~ltv~~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl 80 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDM 80 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHHHHHHHHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHH
T ss_pred CCEEEEECCCEEECCEEECCHHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHH
T ss_conf 96699937807982433203676658887612011256404533765510043311133053246676662688806999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~ 160 (380)
T d1qyia_ 81 LFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160 (380)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCC
T ss_conf 99999999998774348985778987775436408999875365556775148888765324553144755521376528
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~ 240 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGR 240 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 75888999986899999999999877220223345533156675423013565334363999999999879959998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~ 320 (380)
T d1qyia_ 241 PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320 (380)
T ss_dssp CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEE
T ss_pred CHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999998199534785058744133311220331102369986999999998088778899999973899886999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
-
T Consensus 321 vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~~~ 380 (380)
T d1qyia_ 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLEHH 380 (380)
T ss_dssp EESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTTTC
T ss_pred ECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
T ss_conf 889989999999879988999458888643778976799999889999999999998509
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=0 Score=28651.74 Aligned_cols=1 Identities=0% Similarity=-1.256 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~g~nlgn~lda~~~~~~~~~~~~e~~Wgnp~~t~~~i~~ik~~Gfn~vRi 80 (380)
T d1edga_ 1 MYDASLIPNLQIPQKNIPNNDGMNFVKGLRLGWNLGNTFDAFNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRI 80 (380)
T ss_dssp CCCGGGSCCCCCCCCCCCCSHHHHHHHHHCSEEECTTSTTCCCCSSCCSGGGHHHHTTCSCCCHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 95434576564465566888789999864784623867036887656678987776699616699999999869987997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Pv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~~~~~~~~~~~W~qiA~~fkd~~ 160 (380)
T d1edga_ 81 PVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYD 160 (380)
T ss_dssp CCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 34078826899885298999999999999997699799845667887766678656757799999999999887606898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~ 240 (380)
T d1edga_ 161 EHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPN 240 (380)
T ss_dssp TTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCC
T ss_conf 66999621344446786544532223108999999999999999999984457886089857886477543000111554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~giPviiGEfG~~~~~~~~~r~ 320 (380)
T d1edga_ 241 DISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRV 320 (380)
T ss_dssp CCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf 45677887799975157643566667767877655576113899999999999988754962999623376789858999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~a~~~gi~~~~Wdn~~~~~~~~~fg~~dr~~~~w~~p~~~~~~~~~~~g~~~ 380 (380)
T d1edga_ 321 EYMSYYVAQAKARGILCILWDNNNFSGTGELFGFFDRRSCQFKFPEIIDGMVKYAFGLIN 380 (380)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCCSSSSCCCCCEETTTTEESSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999999998699279987998888866745153788865889999999998648999
|
| >d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=28648.50 Aligned_cols=1 Identities=0% Similarity=-1.455 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~ 80 (380)
T d1elja_ 1 MKIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLE 80 (380)
T ss_dssp CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBC
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCC
T ss_conf 98766389999589803899999999999987839799998689999999999976999819999937799999879963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~~P~T~~e~~~~~~~l~~~~~~~~~~~~~~~~ 160 (380)
T d1elja_ 81 PIDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSEPPKTFDEMKAIMEKYYDPANEKYGIAWPINA 160 (380)
T ss_dssp CCTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSSCCSSHHHHHHHHHHHCBGGGTBCSCBCCCSH
T ss_pred CCCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 08665400221112166664103454301122222103566666676421332899999999986044771454311454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (380)
T d1elja_ 161 YFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKAGI 240 (380)
T ss_dssp HHHHHHHTTTSCCSEETTTTEECTTSHHHHHHHHHHHHHTGGGSCSCCCHHHHHHHHHTTSSSEEEECGGGHHHHHHTTC
T ss_pred CCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 32201120478500033454467798899999999987443233545750465666405761155244288999875430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~~l~s~e~~~~~~~~~~g~~P~~~~~~~~~~~~~~~ 320 (380)
T d1elja_ 241 NFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKNDP 320 (380)
T ss_dssp CEEEECCCCEEETTEEECCCCEEEEEEEEEBTTCSCHHHHHHHHHHHHHCHHHHHHHHHHHCCBCCBGGGGGCHHHHTCH
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHCCH
T ss_conf 26644458878776666652211000011244674599999999986326999999998348888777788598755193
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------9
Q 003615 112 -----------------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~g~~~~d~~~al~~~~~~i~~~~k 380 (380)
T d1elja_ 321 VIYGFGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADIEGILKKYQQEILNNMQ 380 (380)
T ss_dssp HHHHHHHHHHTCEECCCCTTHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 899999999518207889878999999999999997789992099999999999999529
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=100.00 E-value=0 Score=28576.13 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 md~~yDviIVGsG~aG~v~A~~La~~G~kVlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (379)
T d2f5va1 1 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 80 (379)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHCGGGHHHHHHHTCEESCCCCCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99732589989688999999999658893999936899987522346222023346664445434566333566554555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~r~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T d2f5va1 81 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 160 (379)
T ss_dssp CCCSCTTSCCCSSCCCCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 66777777667876761688821214442454122303799846216683458988863012457776688686025564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 240 (379)
T d2f5va1 161 ESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVA 240 (379)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTSSCCEECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCEEECCCE
T ss_conf 44454899999877775277877553445656765444210047888788589886343310433776489999956999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 V~~i~~~~~~~r~~gV~~~d~~~g~~~~i~a~~vilaaGa~~tp~lL~~Sg~~~~~~~~~~~~~~~~~~~g~h~mG~~~~ 320 (379)
T d2f5va1 241 CERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPELLPSLGSHRMGFDEK 320 (379)
T ss_dssp EEEEEECTTSSCEEEEEEEETTTCCEEEEEEEEEEECSCHHHHHHHHHHTTSSCCSSCCTTSCCSSSTTTTBTCBCSCTT
T ss_pred EEEEEEECCCCEEEEEEEEECCCCEEEEEECEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 99999818999899999997999979999650899655766898997322002223345566753166545044566888
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~vvd~~~~v~g~~nlyv~d~sv~p~~~~~nPt~t~~alA~r~a~~i~~~~~~~~~~ 379 (379)
T d2f5va1 321 EDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT 379 (379)
T ss_dssp TTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCSHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88724788975213289797388556775656818889999999999999862458999
|
| >d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28575.61 Aligned_cols=1 Identities=0% Similarity=-1.657 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~F~~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~ 80 (379)
T d1lj5a_ 1 VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK 80 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98976888888849999999998723969869987899999999999867728999999970999873778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~ 160 (379)
T d1lj5a_ 81 ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL 160 (379)
T ss_dssp HHHCGGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHHHHTTTTSCCCSSCTTSSCTT
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 86175554520024478773567245788998787636600135555268999999999996049932331376678965
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 t~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~~M~~~~~~~~~~~~~~~~~~~~vv~Lp~~~~~~sm~iilP 240 (379)
T d1lj5a_ 161 TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP 240 (379)
T ss_dssp CCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTSSEEEEEEEE
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
T ss_conf 40466721799511347677355533210346785576112354151205885036666058999603798478999647
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v 320 (379)
T d1lj5a_ 241 YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA 320 (379)
T ss_dssp SSTTSCTHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTCSSSCCCEEEE
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 76666367776530077788777634313308999999984100277878867972235765565223678898077656
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------C 112 (807)
=
T Consensus 321 ~hk~~iev~E~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 379 (379)
T d1lj5a_ 321 LQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP 379 (379)
T ss_dssp EEEEEEEECSSEEEEEEEEEEEESSCCCCCCCCBCCEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEEEECCCCEEECCCCEEEECCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCC
T ss_conf 88999998787145022322542268999879940998999999999968999995398
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=100.00 E-value=0 Score=28574.02 Aligned_cols=1 Identities=100% Similarity=0.604 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgGkTWs~~ 80 (379)
T d3sila_ 1 EKSVVFKAEGEHFTDQKGNTIVGSGSGGTTKYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGGKTWNKK 80 (379)
T ss_dssp CEEEEECTTCCCCBCTTSCBCCCSBGGGBCCEEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSSSCCEEE
T ss_pred CCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 94089984775715889858996479986255746689997999599999667789887777519999913796589999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~i~~~~~~~~~~~~~~p~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~~~~ 160 (379)
T d3sila_ 81 IAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHD 160 (379)
T ss_dssp EEECCCCSCTTTCEEEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHH
T ss_pred EECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 88647998765243477647887899978999999735788875430135678774247887658610001467425321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~g~g~gi~~~~g~l~~p~~~~~~~~~~~~~~~~~~~sddgg~w~~~~~~~~~~~~E~~vve~dG~ll~ 240 (379)
T d3sila_ 161 IVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGFGSENNIIEFNASLVN 240 (379)
T ss_dssp HHHHHCSEEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESSSSSEECCSCCEECTTCCEEEEEETTEEEE
T ss_pred CCCCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEE
T ss_conf 12236530455057662476046534645898815899862799999857887533540356778877889864885799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~R~~g~~~v~~S~DgG~TWse~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~r~~~~~~~s~d~g~tW~~~ 320 (379)
T d3sila_ 241 NIRNSGLRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSAQNKNNDYTRSDISLYAHNLYSGE 320 (379)
T ss_dssp EECCSSBCBCEEESSSSSCCEECTTTTTCSBCCTTCCCCEEEEEEETTEEEEEEEEECCTTSSTTCCCEEEEEECTTTCC
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 98717966999986898623145665323221224321226883469919999889888888635899974688867788
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------9
Q 003615 112 ----------------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~aYS~l~~~~~~~~~~l~~lyE~~~~i~~~~lt~~l~~~~~~~ 379 (379)
T d3sila_ 321 VKLIDDFYPKVGNASGAGYSCLSYRKNVDKETLYVVYEANGSIEFQDLSRHLPVIKSYN 379 (379)
T ss_dssp EEEEEEEECSCCCTTSCCCEEEEEEEETTEEEEEEEEEETTEEEEEECGGGHHHHHTCC
T ss_pred CEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCC
T ss_conf 67995147501589970312248747989999999998999878369776477733479
|
| >d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]
Probab=100.00 E-value=0 Score=28502.53 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~LtfdDVllvP~~st~~sr~V~l~t~lt~~~~l~iPIIsApMdtVt~~~mA~als~~GGLGvLhr~~~ 80 (378)
T d1jr1a1 1 GLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCT 80 (378)
T ss_dssp CBCHHHHTSSCCCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHHTCEEEECCSSC
T ss_pred CCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 98978862568888844679847988776777562069887856899879799987388999999997899469769999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~e~~~~ev~~v~~~~~~p~~~~~~~~~l~v~aavg~~~~~~~~~~~l~~agv~vi~id~a~g~~~~~~~~i~~ik~~~~~ 160 (378)
T d1jr1a1 81 PEFQANEVRKVKKYEQYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPN 160 (378)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCBCTTSCBCCEEEECSSTHHHHHHHHHHHHTCCEEEECCSSCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999887641104327643335546789999956687789999999751555576403676202357999999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~iIaGnVaT~e~a~~L~~aGAD~VkVGiG~Gs~ctTr~~tGvG~pq~sai~~~~~~a~~~~vpIIADGGi~~~gdiakA 240 (378)
T d1jr1a1 161 LQVIGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKA 240 (378)
T ss_dssp CEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEE
T ss_conf 72530220129999999982999786033135444454222347665202567887511569853425333547732468
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 la~GAd~VMmGs~fAgt~EspG~~~~~~g~~~k~~~gm~S~~a~~~~~~~~~~~~~~~~~~~~~eG~~~~v~~~G~v~~~ 320 (378)
T d1jr1a1 241 LALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKF 320 (378)
T ss_dssp HHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSTTTC----------------CCCCCBCEEEEECCBCHHHH
T ss_pred EEEECCEEEECCEEEEEECCCCCCCEECCCEEEECCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHH
T ss_conf 88605435532321342004675231468332312431045554401320332103345644787317850368778999
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~l~gglrs~m~y~G~~~l~e~~~~~~~~~~~f~~~t~~~~~e~~~h~~~~~~~~~~ 378 (378)
T d1jr1a1 321 VPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 378 (378)
T ss_dssp HHHHHHHHHHHHHHTTCSBHHHHHHHHHHSCSCEEECCHHHHHHHSCCSCSCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC
T ss_conf 9999999888652657573999975333577269998845301257875541012339
|
| >d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Maspin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28497.59 Aligned_cols=1 Identities=0% Similarity=-0.461 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~l~~a~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~ 80 (378)
T d1xqga_ 1 QGSMDALQLANSAFAVDLFKQLSEKEPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDV 80 (378)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHSTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 97678999999999999999987229798499888999999999998677589999999708998689999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~y~~~v~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~~~~~~~~~~t 160 (378)
T d1xqga_ 81 NKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQT 160 (378)
T ss_dssp HHHTTTSSEEEEEEEEEETTSCCCHHHHHHTTTTTTTCEEEECHHHHHHHHHHHHHHHHHHHTTTSCSCCSCTTSCCTTC
T ss_pred HCCCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 45467725887312022034532488998766323654686432440567789999999984158715456898989875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~l~na~~f~~~W~~~F~~~~T~~~~F~~~~~~~~~v~mm~~~~~~~~~~~~~l~~~vv~Lp~~~~~~sm~iilP~~~~ 240 (378)
T d1xqga_ 161 KILVVNAAYFVGKWMKKFSESETKESPFRVNKTDTKPVQMMNMEATFSMGNIDSINSKIIELPFQNKHLSMFILLPKDVE 240 (378)
T ss_dssp CEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBGGGSSEEEEEEESSCC
T ss_pred EEEEEEEEEEEEEECCCCCCCCCEECCEECCCCCEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 17888875886002278755652215501289955764123101426422206777389995058995789999567665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~ 320 (378)
T d1xqga_ 241 DESTGLEKIEKQLNSESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKASLENLGLKHIFSEDTSDFSGMSETKGVALSN 320 (378)
T ss_dssp SSSSSCHHHHHSCSHHHHHHHTCGGGCEEEEEEEEEECEEEEEEECTHHHHHHHTCCGGGCTTTCCCTTTCSCSSCCEEE
T ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54433899998639889998743542534799998004899876255887775584000588877544577999923787
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------C 112 (807)
=
T Consensus 321 i~qk~~i~vdE~G~~a~~~t~~~~~~~~~~f~~drPFlf~I~d~~t~~~Lf~G~v~~P 378 (378)
T d1xqga_ 321 VIHKVSLEITEDGGDSIEVPGARILQHKDELNADHPFIYIIRHNKTRNIIFFGKFSSP 378 (378)
T ss_dssp EEEEEEEEECSCBCCCCCCTTTTTSSCCCCCBCCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 6889999990685521223244457999879814998999999999978999993499
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=100.00 E-value=0 Score=28494.38 Aligned_cols=1 Identities=100% Similarity=0.204 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~i~~~f~W~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~df~~L 80 (378)
T d1jaea2 1 EKDANFASGRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDM 80 (378)
T ss_dssp CCCCCCCTTCEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
T ss_conf 99998879970699702574999999999999980998899092620678899877565678632268889999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 V~~aH~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~n 160 (378)
T d1jaea2 81 TRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGS 160 (378)
T ss_dssp HHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTS
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998567244564034421244677766555688744476788876556899886777875433100014567103389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 p~V~~~l~~~~~~w~e~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (378)
T d1jaea2 161 DYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFG 240 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSSSSCCGGGTTTSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCCCHHCCCCC
T ss_conf 99999999999999985778446531112578787777776543132112444555404532001553200110103665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~lA~af~lt~p~G~P 320 (378)
T d1jaea2 241 CVLEFQFGVSLGNAFQGGNQLKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKNPKPYKMAIAFMLAHPYGTT 320 (378)
T ss_dssp EEECHHHHHHHHHHHTTTSCGGGGGGCSGGGTCCCGGGEEECSCCTTHHHHSCTTCCCTTSHHHHHHHHHHHHHSCSSEE
T ss_pred HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 00021332014554305762999999855440378540457624678777588763456898999999999998579887
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------9
Q 003615 112 ---------------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------------C 112 (807)
=
T Consensus 321 ~iy~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~~~ 378 (378)
T d1jaea2 321 RIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGFRNAVE 378 (378)
T ss_dssp EEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8982365577777898888987778875866787878889989999999999866479
|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Antarctic bacterium DS2-3R [TaxId: 56673]
Probab=100.00 E-value=0 Score=28425.01 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~GL~Gv~v~~s~IS~Idg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T d1a59a_ 1 EPTIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVK 80 (377)
T ss_dssp CCCCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHH
T ss_pred CCCCCCCCCCCEECEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99889888998466075727858998799958439998714999999999978989499999999999998337986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~l~~~p~~~~pm~~l~~~~s~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~r~~~g~~~~~p~~~~~~~~~~~~ 160 (377)
T d1a59a_ 81 GAIDLLSTACHPMDVARTAVSVLGANHARAQDSSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLW 160 (377)
T ss_dssp HHHTTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997302002113445555320344532344657777777777888899888877763268887789876256999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~l~~~Lvl~aDHg~n~StfaaR~vaSt~~d~~~~~~a~~~al~Gp~hGga~~~~~~~l~~i~~~~~~ 240 (377)
T d1a59a_ 161 MTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDE 240 (377)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 62123320888877677876542477676236666664258514467787877603420111278999999998621566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~v~~~l~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~k~l~pNvD~ 320 (377)
T d1a59a_ 241 SLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEAKQIKPNLDY 320 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHCCCBCTHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 50266777899999998667866466874445667406777767777665412206677899999999971799978176
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~l~~~lG~p~~~~~~lf~i~R~~G~~AH~~Eq~~~~~l~RP~~~Y~G~~~R~~p 377 (377)
T d1a59a_ 321 PAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVADNALIRPLSEYNGPEQRQVP 377 (377)
T ss_dssp HHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCCCCCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC
T ss_conf 999999996849667769999999999999999998579975746540389999897
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28424.33 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRL 80 (377)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 98469999970585999999999997189998799993798899999985168777535443889988999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (377)
T d1o6ca_ 81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLK 160 (377)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 56665336653676403454301566653114227999514565433234714554003565304886323466634433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (377)
T d1o6ca_ 161 ENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHL 240 (377)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC---
T ss_pred HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 03445427523420678888777777753334430578449998323101466337899998752123355653234552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~ 320 (377)
T d1o6ca_ 241 NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGT 320 (377)
T ss_dssp -CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CHHHHGGGGTCCEEEECSCCC---CTTTTSSEEECS
T ss_pred CCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHCCEEEECCC
T ss_conf 11321122101345651475132136889999864225641640467766665414898078875822000680598789
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~k~~~~~~~ 377 (377)
T d1o6ca_ 321 DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFT 377 (377)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSCSCCCCCCC
T ss_pred CHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999999999749687763065889898982999999999985083336878999
|
| >d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]
Probab=100.00 E-value=0 Score=28423.40 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~l~~PGP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~ 80 (377)
T d1vjoa_ 1 ISINDNQRLQLEPLEVPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTA 80 (377)
T ss_dssp CCCCCTTCCCCCSCCCCCCEECSSSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf 96473003446799987266610899789999999757688897888999999999999999859999809998484899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~ 160 (377)
T d1vjoa_ 81 AMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQ 160 (377)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEEE
T ss_conf 99999984334344420242001344444454320311100135778743202456666057640345554202334630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1vjoa_ 161 PLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDM 240 (377)
T ss_dssp CCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCH
T ss_pred CHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEECC
T ss_conf 50554334552264389960002333321012456505640212440589779974132667765203589974011001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~ 320 (377)
T d1vjoa_ 241 NLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD 320 (377)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT
T ss_pred CHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCEEEEEECCC
T ss_conf 10110257653346530142022257777666533725787888887654566664168546068276097499998999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~ 377 (377)
T d1vjoa_ 321 GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 377 (377)
T ss_dssp TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 989999999998649999966862326998998267578999999999999999859
|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyl Hydrolase Family 88 domain: Unsaturated glucuronyl hydrolase species: Bacillus sp. GL1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=28422.30 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~g~~~~~~~~~Wt~Gf~~G~lwl~ye~Tgd~~~~~~a~~~~~~~~~~~~~ 80 (377)
T d2d5ja1 1 MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR 80 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEEEEESSSSSEEEESSCSSCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 94899999999999988855101797748998377408983376479999999999869999999999999999975224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~hd~Gf~~~~s~~~~y~~Tgd~~y~~~a~~~a~~L~~r~~~~~g~~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~ 160 (377)
T d2d5ja1 81 FENLDHHDIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWA 160 (377)
T ss_dssp TTTCSSSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCTTTTTEEEGGGGGGHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 45566347631257679999987299989999999999999831867785435787888777766055125429999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~tgd~~y~~~A~~h~~~~~~~l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~ 240 (377)
T d2d5ja1 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA 240 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCH
T ss_conf 88509876999999999999998268899748898865899862578888788773167632199999999999983881
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~a~~~a~~~l~~~~~dgi~~wd~~~p~~~~~~~DsSa~Ai~A~gll~L~~~~~~~~~~~~~Y~~~a~~i~~~l~~~ 320 (377)
T d2d5ja1 241 DLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDG 320 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCTTSCCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999738877885321566678999877326789999999999852577267999999999999999876
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~iygDYy~~Eal~r~~~~~~~~w~~~~~ 377 (377)
T d2d5ja1 321 YAERDDGEAEGFIRRGSYHVRGGISPDDYTIWGDYYYLEALLRLERGVTGYWYERGR 377 (377)
T ss_dssp TBCCCCSSCCCSBSCBCSBTTTTBSSSBCBHHHHHHHHHHHHHHHHCCCTTSSCTTC
T ss_pred HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 600689988844631635789999988673559999999999997388653745899
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=0 Score=28420.57 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~ 80 (377)
T d1k8qa_ 1 AFGKLHPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPN 80 (377)
T ss_dssp CCCBSSCCCGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
T ss_conf 97667789987677889999984998558999817999898998468888876689989089989996314677442752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~ 160 (377)
T d1k8qa_ 81 NSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGF 160 (377)
T ss_dssp TCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHH
T ss_pred CHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH
T ss_conf 06999999879989998089988888887778752220137799984341799999999972999879997332699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1k8qa_ 161 IAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNAL 240 (377)
T ss_dssp HHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99986323320004675214544444114678998750136666642000114046777765431022034667877655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~ 320 (377)
T d1k8qa_ 241 FIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWN 320 (377)
T ss_dssp HHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEE
T ss_pred HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE
T ss_conf 42037771114677766666315553359999999999753741220330345556651345751222754899989999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~~ 377 (377)
T d1k8qa_ 321 GGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp ETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCC
T ss_conf 589972289999999997799759999699988303424454999999999997229
|
| >d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: SSO1389-like superfamily: SSO1389-like family: Cas DxTHG domain: Hypothetical protein SSO1389 species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=28420.44 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 m~~l~ia~wG~p~~w~~~~Y~~~~~~~~~~~s~~~l~~~~~~d~~vi~~~dSl~~~~~~~~~d~~~~~~~~~~~~~~~l~ 80 (377)
T d2i71a1 1 MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG 80 (377)
T ss_dssp CEEEEEEEESCTTCCCCEEEEETTEEEEESSHHHHHHHHTTCSEEEEEEEGGGGGGGTCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 95499993478665728999978931204455999998747883999997301123468822799999999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~viv~P~vg~~f~g~~~~~~~~~~~~l~~~l~~~~~~eI~lD~thGiNy~~~~~~~a~~~~~~~~~~~~~~~~~l~~ 160 (377)
T d2i71a1 81 ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL 160 (377)
T ss_dssp CCSCEEEECCCBTTEESCTHHHHHHHHHHHHHHHHHHTEEEEEEEEEECCTTHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 88449992797628856888999999999999850389868999777870059999999999999999974578744999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~nsdP~~~~~~~~~~I~~i~~~~i~p~~~~~~i~~~fl~~~k~~~~~~~ke~~~~i~~~~~al~~gl~lyL~~~~~~~~l 240 (377)
T d2i71a1 161 YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL 240 (377)
T ss_dssp EECCCTTCCTTSEEECEEEEEEEECHHHHHHHHHHHHHTSCTTTTTTSSTTHHHHHHHHHHHHHTTCHHHHHHSCCHHHH
T ss_pred EECCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
T ss_conf 94776568887746999840126221466554303566667777678888888899999986540429999874022327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~e~~~~~~~~~~~~e~~~~~~~~~~~~~y~~~~~~~~~~i~~~~~~~~l~~l~e~~~~~v~~~~i~~Ei~~i~~~~~~ 320 (377)
T d2i71a1 241 KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG 320 (377)
T ss_dssp HHHHHHHHSCCEEEECSSCEEEECCCHHHHHHHHHHHHHGGGCSCEEHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88998630002330465312302330788999999998740230210899999998861356999999999988861477
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~k~~~~~~~~~d~RNF~AHaGLe~nvt~vk~~~~~i~v~y~e~~~~i~~~l 377 (377)
T d2i71a1 321 SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI 377 (377)
T ss_dssp SSCEEGGGTC---------CHHHHTTTCCTTTCEEEEETTEEEEECGGGHHHHHHHC
T ss_pred CCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCC
T ss_conf 760478886310147885300100348652729999669889998787599998419
|
| >d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: V-region of surface antigen I/II (SA I/II, PAC) family: V-region of surface antigen I/II (SA I/II, PAC) domain: V-region of surface antigen I/II (SA I/II, PAC) species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=28419.28 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~kdla~Y~~~l~~Y~~e~~~y~~alae~ek~KnedGyl~~p~aQ~LvF~~Ep~A~~ti~~~gk~~~a~~~~~~~~~~~~~ 80 (377)
T d1jmma_ 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKASAVDDAFSKSTSK 80 (377)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSTTSBSSCCCBCEECSCCTTCEEEEEESSEEECHHHHHHHHHSGGGH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCH
T ss_conf 94077889999999999999999999998740556663640145414316787268885255311301112233044303
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~l~kg~~vtvTYtNL~nSsynGKKI 160 (377)
T d1jmma_ 81 AKYVQKILQLDDLDITNLEQSNDVASSMELYGNFGDKAGWSTTVSNNSQVKWGSVLLERGQSATATYTNLQNSYYNGKKI 160 (377)
T ss_dssp HHHHTTEECGGGCCGGGGCSGGGEESSCCEEETTSTTSSCEETTTBTSCCEEEEEEECTTCEEEEEEECCSSCEETTEEE
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEE
T ss_conf 33101010223443224333322000002355555445501024567753025699617998999962754442178323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 sKvvytYtl~~s~s~~g~~i~~~l~~DPT~t~f~~~~~g~~~~~~~~~v~~~vkFYDe~G~~i~~~~Al~S~sSLN~~~~ 240 (377)
T d1jmma_ 161 SKIVYKYTVDPKSKFQGQKVWLGIFTDPTLGVFASAYTGQVEKNTSIFIKNEFTFYDEDGKPINFDNALLSVASLNREHN 240 (377)
T ss_dssp EEEEEEEEECTTCCCSSSCEEEEEESSGGGCEEEECCCSSCBSSCEEEEEEEEEEEETTSCBCCEEEEEEEECCCCBCSS
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCC
T ss_conf 69999999555788888624689815995279998512666656643899999999789989226602687410258998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~iE~V~~~ng~fv~I~GSSV~~~~g~~ya~~~~~~~~~~~Gsr~~~~~~~~~~s~WD~~~s~~ayYGA~v~~~~g~~~~~ 320 (377)
T d1jmma_ 241 SIEMAKDYSGKFVKISGSSIGEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNHV 320 (377)
T ss_dssp EEEEEESCSSEEECBTTCSEEEETTEEEECSSCCSSTTSTTCSSCSSCCSSTTCCCCSSSCTTGGGGCEEEEEEESCEEE
T ss_pred CEEEEECCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE
T ss_conf 46899748971899579766865994772677432346676421223467766787778997631123778970895489
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 t~g~~~a~~~~~~~~~~~~~~~d~~~~~~~~iWfa~ns~i~a~~vp~~~~e~Pt~P~ 377 (377)
T d1jmma_ 321 TVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPV 377 (377)
T ss_dssp EEEEEEGGGTSCGGGSCCCTTCCTTCCBCSEEEECCBSCCCSSSCCBCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 970455432246644455666655567776231674378765458999987899989
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=0 Score=28419.22 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l 80 (377)
T d1ci9a_ 1 AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGEL 80 (377)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
T ss_conf 94189999999999998289875999999999999998478624455988999986860326899999999999975996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T d1ci9a_ 81 ALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFA 160 (377)
T ss_dssp CTTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 53322112331110134324577515013035532466633444113565540245665455899999999862888679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 PG~~~~Ys~~~~lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1ci9a_ 161 PGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHG 240 (377)
T ss_dssp TTSCCCCCTHHHHHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCSCGGGBCCCEECCSSSCEECCTTEEEECCTTSC
T ss_pred CCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99627607689999998763133203455467786213875343357826640000024677653134654345545666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~G~~~~~~~~~ 320 (377)
T d1ci9a_ 241 AAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDP 320 (377)
T ss_dssp SEEEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCHHHHHHHHSCSSCGGGCTTSTTEEECSSSEEESCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEECCC
T ss_conf 54345763223645555677632235999999999765116787077876650102477766678971241011430376
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~g~~~h~G~~gt~~~idP~~~l~vv~ltN~~~~~~~~~~~~~l~~~vYa 377 (377)
T d1ci9a_ 321 AAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYA 377 (377)
T ss_dssp HHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEETHHHHSHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 535788999856626821418999944998999988489999875999999982189
|
| >d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Carnitine acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28422.54 Aligned_cols=1 Identities=0% Similarity=-0.926 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~Q~sLP~LPvP~L~~Tl~ryL~s~kPl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~ 80 (377)
T d1nm8a1 1 HHTDPLPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQ 80 (377)
T ss_dssp CCCCCCCCCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 96567998999999999999999865149999999999999998736860799999999975147773468899886435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~R~pl~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~plcM~qy~~lF~t~RiP~~~~D~ 160 (377)
T d1nm8a1 81 YRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDT 160 (377)
T ss_dssp CCSCSBTTTBCEEECCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEETTEECCCGGGGGTTTEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHCCCEECCCCCCCC
T ss_conf 88785466766300267777760679999999999999999998728778656589944189998761765068999883
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~~~~~~~~~HIvV~~~g~~ykv~v~d~~g~~ls~~ei~~~l~~I~~~~~~~~~~~vg~LTt~~Rd~Wa~~r~~L~~~ 240 (377)
T d1nm8a1 161 VSNFSKTKKPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKD 240 (377)
T ss_dssp EEECTTSSSCCCEEEEEETTEEEEEECBCTTSCBCCHHHHHHHHHHHHHTCCCCCSCCGGGGGGSCHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 20057778888769999899899999988999899899999999999961104688886405678728999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~N~~~L~~Iesalfvv~LDd~~p~~~~e~~~~~~~~~~lhG~g~~~~~~NRW~DKs~q~IV~~nG~~g~~~EHS~~DG~ 320 (377)
T d1nm8a1 241 KVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGP 320 (377)
T ss_dssp HHHHHHHHHHHHSSCEEEEECCCSCCCSTTHHHHHHHHHHHCSCTTTTTTSCCTTBSEEEEEETTSCEEEEECTTSCCHH
T ss_pred CHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH
T ss_conf 60799999997547888833788888613666666555033687557987726665517999789877862267761289
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------9
Q 003615 112 --------------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------------C 112 (807)
=
T Consensus 321 ~v~~~~~~v~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~a~~~~~~li~D 377 (377)
T d1nm8a1 321 PIVTLLDYVIEYTKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQD 377 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999987234666788778899975878976989999999999999998259
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28346.58 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 MKi~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (376)
T d1f6da_ 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKP 80 (376)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96999998267399999999999738998779999088989999999862878774400488999899999999986478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~~~~~L~~~G 160 (376)
T d1f6da_ 81 ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN 160 (376)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHHHHHHTT
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
T ss_conf 89745676224310344313689998740753899852446542000474066554203200488743478886877518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ 240 (376)
T d1f6da_ 161 VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ 240 (376)
T ss_dssp CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEE
T ss_pred CCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 98653412167248788887765423512321111022334777766998335411112009999999865434214047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssgi~Ea~~lg~P~Inir~~ter~~~~~~g 320 (376)
T d1f6da_ 241 IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG 320 (376)
T ss_dssp EEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEECC
T ss_conf 85254432124446766640444513323556789999984163998368506766787489889727876576412368
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~i~v~~~~~~I~~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~~~i~~ 376 (376)
T d1f6da_ 321 TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (376)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 06987899999999999997285766530457898989849999999998568999
|
| >d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase ArnB species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=28345.86 Aligned_cols=1 Identities=0% Similarity=0.239 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~E~~la~~~g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~ 80 (376)
T d1mdoa_ 1 DFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMT 80 (376)
T ss_dssp CCBCSCCCCCCHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 98668999999999999999996699768977999999999998819599968889999999998089998989872343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~ 160 (376)
T d1mdoa_ 81 WVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTS 160 (376)
T ss_dssp CHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred CCCCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHCCCE
T ss_conf 42110001103431244114433347899999975478981999867888715333899988741946996464310674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 240 (376)
T d1mdoa_ 161 YKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLN 240 (376)
T ss_dssp ETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHH
T ss_pred ECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
T ss_conf 68820466657664278867787788888997125679998764036876443332233323311000012353440145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~ 320 (376)
T d1mdoa_ 241 AAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGL 320 (376)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 66655433333579999866534554311465433221234444544332222220002133399999999987998465
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
=
T Consensus 321 ~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~~ 376 (376)
T d1mdoa_ 321 HFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 376 (376)
T ss_dssp CCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ECCCHHCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78532308998952887898799999859798448999999999999999999729
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=100.00 E-value=0 Score=28345.00 Aligned_cols=1 Identities=0% Similarity=-0.492 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~i~~F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfV 80 (376)
T d2vata1 1 NRFEASLDAQDIARISLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFI 80 (376)
T ss_dssp CHHHHTSCCCEEEEEEEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEE
T ss_pred CCHHHCCCCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf 93220345475375376782799885895699996256488899889984887677021234887077998637463389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 I~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v 160 (376)
T d2vata1 81 ICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYV 160 (376)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHH
T ss_conf 98346788767888877896212377545568852057889999999987386617886134278899999998361777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~ 240 (376)
T d2vata1 161 RKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRN 240 (376)
T ss_dssp CCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 52312356523455778888999987422212457775433116789999999999984599999999723224422200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~L 320 (376)
T d2vata1 241 ISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPAL 320 (376)
T ss_dssp -----------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEE
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 01000111013444332222343156799999987765530555012899999998503333338899999850899989
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
=
T Consensus 321 vI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 321 IICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 99868420849999999998627874999899988652266999999999999748
|
| >d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Alaserpin (serpin 1) species: Tobacco hornworm (Manduca sexta) [TaxId: 7130]
Probab=100.00 E-value=0 Score=28344.42 Aligned_cols=1 Identities=0% Similarity=-1.292 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 g~~~~~~~l~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~ 80 (376)
T d1k9oi_ 1 GETDLQKILRESNDQFTAQMFSEVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNR 80 (376)
T ss_dssp CTHHHHTTHHHHHHHHHHHHHHHHHTTSTTSCEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTTCSCTTHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 98558999999999999999999983298981998889999999999986673899999997099985457999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~~ 160 (376)
T d1k9oi_ 81 GVRAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVEDQTNNRIKNLVDPDALDETT 160 (376)
T ss_dssp SCSCCSSBCCEEEEEEEEESSCCBCSGGGSTTTSSSCCCEEEECTTSHHHHHHHHHHHHHHHTTTSSCCCSCGGGCCTTC
T ss_pred HHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH
T ss_conf 87536798578854002304887166899998752286554245555699999999999986378221006877899501
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~l~~~vveLP~~~~~~sm~iilP~~~~ 240 (376)
T d1k9oi_ 161 RSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVD 240 (376)
T ss_dssp CEEEEEEEEEEBCBSSCCCGGGCEEEEECSSSSCCEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGGSEEEEEEEESSTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 45665515655422278883233513053279926999723421417887507798799996237993699999668776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~l~~~~~~l~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGl~~~F~~~~ad~s~~~~~~~~l~vs~v~q~ 320 (376)
T d1k9oi_ 241 GITALEQKLKDPKALSRAEERLYNTEVEITLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKTKESLTVDAAIQK 320 (376)
T ss_dssp THHHHHHHTTSTTTTTTTTTSCEEEEEEEEEECEEEEEEEEHHHHHHTTTCCSTTSTTTSCBTTTBSSCCCCCCSEEEEE
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 63578864225346899875151228999843589752212788765438754357652312356588998788736877
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~ievdE~G~~a~a~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~~~lf~G~v~~P 376 (376)
T d1k9oi_ 321 AFIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIEP 376 (376)
T ss_dssp EEEEECSCBSSCSSSCCSSSEESCCCCCCEEECCSCEEEEEEESSSEEEEEEESCC
T ss_pred EEEEECCCCEEEECCCCEEEECCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCC
T ss_conf 89999987116001432344116788897599648979999979969999994288
|
| >d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28344.04 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~ 80 (376)
T d1eg5a_ 1 MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKT 80 (376)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHC
T ss_conf 97988786316699999999999998748987654699999999999999999998098978099979878997766621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~ 160 (376)
T d1eg5a_ 81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVED 160 (376)
T ss_dssp HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHH
T ss_conf 44332235763223432220128999999866988999768988727789999864899608999777665412554124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~~~p~~~g~~~~~~~~~~~~~ 240 (376)
T d1eg5a_ 161 VTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQN 240 (376)
T ss_dssp HHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44554311467504787531246545520004865000125434357886268852576658720189875445477664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr~ 320 (376)
T d1eg5a_ 241 VPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST 320 (376)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEC
T ss_conf 02456677775402210246666666543200012331011123433211256023225997999999988559908967
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
-
T Consensus 321 G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~~l 376 (376)
T d1eg5a_ 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (376)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 61103886206699997399834479889996589899999999999999999639
|
| >d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: PstS-like phosphate-binding protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28342.07 Aligned_cols=1 Identities=0% Similarity=0.106 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~i~gaGat~p~p~~~~~~~~~~~~~~y~~~GSG~G~~~~~~g~~~~~~~~~~~tvdfa~sd~~l~~~E~~~~~~~~~~~~ 80 (376)
T d2v3qa1 1 DINGGGATLPQKLYLTPDVLTAGFAPYIGVGSGKGKIAFLENKYNQFGTDTTKNVHWAGSDSKLTATELATYAADKEPGW 80 (376)
T ss_dssp CBCEEECSTTHHHHTSTTTSCTTBCCCEECCHHHHHHHHHHTCGGGTCSCTTSCCCEEEESSCCCHHHHHHHHHHTHHHH
T ss_pred CCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 93215222799999998763596789956576899999963886444556546771353477789999988774066777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~v~iPv~~~~Iai~~N~~~~~~l~Lt~~~L~~If~G~It~Wnd~~i~~p~~~I~vv~R~d~SGTt~~Ft~~L~~~~~~ 160 (376)
T d2v3qa1 81 GKLIQVPSVATSVAIPFRKAGANAVDLSVKELCGVFSGRIADWSGITGAGRSGPIQVVYRAESSGTTELFTRFLNAKCTT 160 (376)
T ss_dssp CCEEEEEEEEEECBCBBCCCCSSCCEECHHHHHHHHHTSCCBGGGSTTSCCCSBCEEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEEEEEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
T ss_conf 86289747764479987347625543479999843337623001135457677854784489986078889988652755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~g~~~~~~~~~~~~~~~~~~~~~a~gs~gv~~~v~~~~~~~gaIGY~~~~ya~~~~~~l~~~~~~~~~~~~~~~~~ 240 (376)
T d2v3qa1 161 EPGTFAVTTTFANSYSLGLTPLAGAVAATGSDGVMAALNDTTVAEGRITYISPDFAAPTLAGLDDATKVARVGKGVVNGV 240 (376)
T ss_dssp SSSCBCCCSCGGGTBTTCSTTSTTCEEESHHHHHHHHHHCTTSCSCEECCBCHHHHSSSGGGGGCTTTBCEECCEEETTE
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCEEECC
T ss_conf 32234643102332245677677650003573087887540477765444430100022222103332024453000035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~v~pt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YPI~~~~y~~~~~~~~~~~~~~~vk~Fl 320 (376)
T d2v3qa1 241 AVEGKSPAAANVSAAISVVPLPAAADRGNPDVWVPVFGATTGGGVVAYPDSGYPILGFTNLIFSQCYANATQTGQVRDFF 320 (376)
T ss_dssp EECCBCCCTHHHHHHHHTCCCCCGGGTTCGGGGSCEEESSCBTTEEECCSSSCSCEEEEEEEEESCBSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCHHHHHHHHHH
T ss_conf 66621245888997651144554344566532223334322001357888851112111100002368700159999999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~l~~~~~gq~~~~~~GyvPLp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (376)
T d2v3qa1 321 TKHYGTSANNDAAIEANAFVPLPSNWKAAVRASFLTASNALSIGNTNVCNGKGRPQ 376 (376)
T ss_dssp HHHTCSSSSSHHHHHHTTCBCCCHHHHHHHHHHHTSTTSTTSTTCHHHHTTCCBCC
T ss_pred HHHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99860553257889978974399999999999986225420227864367788999
|
| >d1wu4a1 a.102.1.2 (A:6-381) Xylanase Y {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Xylanase Y species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=28341.27 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~g~~~~~~y~n~~~~~g~~q~~~~~k~~~~~~~~f~~~~~~~~y~~~~~~~~yv~d~~n~dv~SEGqgYGMl~Av~~~dr 80 (376)
T d1wu4a1 1 EGAFYTREYRNLFKEFGYSEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTGNLDVRTEGMSYGMMMAVQMDRK 80 (376)
T ss_dssp CCHHHHCCCCCHHHHTTCCHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTTTTBEEHHHHHHHHHHHHHTTCH
T ss_pred CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 99764675552888828899999999999999981689766189971798558766799985556799999999980999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~FD~lw~wt~~~l~~~d~~~~~L~aW~~~~~g~v~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~~~Y~~~A~~il~~i 160 (376)
T d1wu4a1 81 DIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTC 160 (376)
T ss_dssp HHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999985367777666715336799997889988767999999999999874887533356999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~nPSY~~P~~~~~fa~~a~~~~~~~W~~~~~~s~~ll~~~~~~~tGL~PDw~ 240 (376)
T d1wu4a1 161 VHNGEGGPGHPMWNRDNKLIKFIPEVEFSDPSYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYA 240 (376)
T ss_dssp HHTTSSSSCCCSBCTTTCCBCSSTTCSEECGGGCCHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCCSSE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 98546788865103674455558887502801037899999998613477457999999999999971147879998425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~dg~~~~~~~~~~~~yDA~Rvpl~ia~d~~w~g~~~~~~~~~~~~~~f~~~~~~~~~~~y~~dG~~~~~~~~~~~g~~a 320 (376)
T d1wu4a1 241 YYDGTPNDEKGYGHFFSDSYRVAANIGLDAEWFGGSEWSAEEINKIQAFFADKEPEDYRRYKIDGEPFEEKSLHPVGLIA 320 (376)
T ss_dssp ETTSSBCCTTSCSSBSGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCCGGGCEEECTTSCEEEEECSCHHHHHH
T ss_pred EECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 35895378778997750199999999977512575356799999999998634666688553368414677888679999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~a~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~Llall~lsG~~r~~~p 376 (376)
T d1wu4a1 321 TNAMGSLASVDGPYAKANVDLFWNTPVRTGNRRYYDNCLYLFAMLALSGNFKIWFP 376 (376)
T ss_dssp HHHHGGGGCTTCTTHHHHHHHHHTSCCCCSTTHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99999997279716899999987234788888878999999999998298444179
|
| >d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Galacturonase domain: Polygalacturonase species: Erwinia carotovora, subsp. carotovora [TaxId: 554]
Probab=100.00 E-value=0 Score=28338.46 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~T~aIq~AIdac~~Gg~V~iP~G~~~vyltg~i~LkSnv~L~l~~ga~L~~s~d~~ 80 (376)
T d1bhea_ 1 SDSRTVSEPKTPSSCTTLKADSSTATSTIQKALNNCDQGKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp CCSSCCCCCCCCCEEEEEECCSSBCHHHHHHHHTTCCTTCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSG
T ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECEEECCCCEEEEECCEEEEECCCHH
T ss_conf 98654578989975686789997369999999987779999999699745699804897888789991997999738979
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~y~~~~~~~~~~~~~~~~~~~~i~~~~~~Ni~ItG~G~IDG~G~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~ 160 (376)
T d1bhea_ 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSK 160 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCE
T ss_pred HCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 96566630236751576541268824863079972768813344162277641000123444466777897699999115
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 nv~i~~iti~ns~~~~~~~~~~~~v~i~n~~I~~~~~~~NtDGidi~~s~nv~I~n~~i~~gDD~i~~ks~~~~~~~~ni 240 (376)
T d1bhea_ 161 NFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEE
T ss_pred CEEEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEEECCCCCEEEECCCCCCCCCEE
T ss_conf 68997039955993699996885599996750588657776340025645099982533048981566046677774459
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~i~n~~~~~~~g~~iGs~~~~v~nv~i~n~~~~~~~~g~~Iks~~~~gG~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~~ 320 (376)
T d1bhea_ 241 SILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGS 320 (376)
T ss_dssp EEEEEEECSSSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCC
T ss_pred EEEEEEEECCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 99963896688730645668778899993258688704789825887607989999968993667448998144788888
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------9
Q 003615 112 -------------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~i~nIt~~Ni~~~~~~~~~l~g~~~~~~~~v~~~nv~i~~~~~~~~~nv~~k~ 376 (376)
T d1bhea_ 321 NVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVNVKK 376 (376)
T ss_dssp CCCEEEEEEEEEEEECSCCEEEEECTTCSSCEEEEEEEEECCTTCEEEEESEEEEC
T ss_pred CCCEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEECC
T ss_conf 79779518999079935325999868888823699984899759888788055329
|
| >d2fug41 e.18.1.2 (4:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: HydB/Nqo4-like superfamily: HydB/Nqo4-like family: Nqo4-like domain: NADH-quinone oxidoreductase chain 4, Nqo4 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28271.25 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 p~~hG~~r~~~~v~ge~V~~a~~~ig~~~RGfEk~l~Gr~~~da~~i~~RICGIC~~aH~~A~~~AlE~a~gv~~p~~a~ 80 (375)
T d2fug41 1 PSTHGVLRLMVTLSGEEVLEVVPHIGYLHTGFEKTMEHRTYLQNITYTPRMDYLHSFAHDLAYALAVEKLLGAVVPPRAE 80 (375)
T ss_dssp CEEECSSSCEEEECCSSSCCEEEECCTTCCCHHHHGGGSCHHHHHHHGGGTTSSSHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99885289999976988999898306652689998749996882212063111038799999999999991998899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~lR~l~~~~e~i~sH~l~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~G~~~h~~~~~~gG~~~~~~~~~~~~~~~~~ 160 (375)
T d2fug41 81 TIRVILNELSRLASHLVFLGTGLLDLGALTPFFYAFRERETILDLFEWVTGQRFHHNYIRIGGVKEDLPEEFVPELKKLL 160 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTSSSSSCCCEETTEESSCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCEEECCCHHHHHHHHHHH
T ss_conf 99999999988767999999834520024388899999899999999846865520521202302279867889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 240 (375)
T d2fug41 161 EVLPHRIDEYEALFAESPIFYERARGVGVIPPEVAIDLGLTGGSLRASGVNYDVRKAYPYSGYETYTFDVPLGERGDVFD 240 (375)
T ss_dssp TTTTTTTHHHHHHHSSCSCCTTSCSCCCCSSSCSTTTTTTCCSSCCSSCCTTTTTCCSSCCCC-----CCCCCCSSSSHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76088778898740367500002577533451023315765554555642133120067554556565534424776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~g~vEApRG~L~ 320 (375)
T d2fug41 241 RMLVRIREMRESVKIIKQALERLEPGPVRDPNPQITPPPRHLLETSMEAVIYHFKHYTEGFHPPKGEVYVPTESARGELG 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSCCBCCCTTTSCCCTTCTTTCTTHHHHHHHHHHSCCCCCSCCCCCCBCCSSSCBC
T ss_pred CCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEE
T ss_conf 10213444421468999899748898744344110335699997554541013444566776899579999974886799
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------9
Q 003615 112 ------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------C 112 (807)
=
T Consensus 321 H~~~~d~~g~i~~~~ii~PT~~N~~~~e~al~G~~i~D~~~iirSfDpC~sC~dr 375 (375)
T d2fug41 321 YYIVSDGGSMPYRVKVRAPSFVNLQSLPYACKGEQVPDMVAIIASLDPVMGDVDR 375 (375)
T ss_dssp EEEECCSSSSCSEEEECCSHHHHTTTHHHHTTTSCGGGTTHHHHTTCCCHHHHHC
T ss_pred EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999989981899999898877999999996799167899998567976447898
|
| >d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28268.95 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 80 (375)
T d1o4sa_ 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGE 80 (375)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 94546548977899999999999977998589989588997889999999999855876889986789999999864332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1o4sa_ 81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 160 (375)
T ss_dssp HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 15655433323346728999999999981899989982586543102321122222233344332356136777775235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~ 240 (375)
T d1o4sa_ 161 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 240 (375)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCC
T ss_conf 76379981899885577999999999986887098124674003001333332112355778978999405142058866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~~ 320 (375)
T d1o4sa_ 241 RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKV 320 (375)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEC
T ss_conf 44543233331012232212344333320002334321121023678889999999987874495685689407999979
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------9
Q 003615 112 ------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l~~ 375 (375)
T d1o4sa_ 321 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 375 (375)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 9997999999998599999976115899969999728999999999999999659
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=28268.72 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~i~EG~~~i~vp~~~~~~~~~vFYNp~q~~NRDlsvl~~~~~~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~ 80 (375)
T d2dula1 1 LIEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 80 (375)
T ss_dssp CEEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred CEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 94899586899941787778788242877764107999999973998799868774099999998589978998259989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~v 160 (375)
T d2dula1 81 AYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGV 160 (375)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999986375432211243323554336741004556567515767744578888817999999997044877999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 TaTD~a~L~G~~~~~~~r~Yg~~~~~~~~~~E~glRill~~i~r~Aa~~~~~i~PllS~~~~~y~Rv~vrv~~~~~~~~~ 240 (375)
T d2dula1 161 TATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDE 240 (375)
T ss_dssp EECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEESHHHHHH
T ss_pred EECCCHHHCCCCCHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCHHHHHH
T ss_conf 93686120479917899972876137866501889999999999987429805999999824607999999137677887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~g~~~~C~~c~~~~~~~~~~~~~~~~~GPlW~G~L~d~efl~~~~~~~~~~~~~~~~~~~~ll~~i~eE~~~P~~y 320 (375)
T d2dula1 241 TLEKLGYIYFDDKTGKFELEQGFLPTRPNAYGPVWLGPLKDEKIVSKMVKEAESLSLARKKQALKLLKMIDQELDIPLFY 320 (375)
T ss_dssp HHTTEEEEEECTTTCCEEEEESSSCCSSSCEEEEECSCSBCHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHSCCSSCCE
T ss_pred HHHHCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88744817871898877775588999787867883673369999999998754057540569999999998614998298
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------9
Q 003615 112 ------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------C 112 (807)
=
T Consensus 321 ~l~~la~~lk~~~P~~~~~~~aL~~~Gy~asrtH~~p~~iKTdAp~~~i~~i~r~ 375 (375)
T d2dula1 321 DTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIKR 375 (375)
T ss_dssp EHHHHHHHHTCCBCCHHHHHHHHHHTTCCEEEETTEEEEEEESSCHHHHHHHHBC
T ss_pred CHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHHHHHHHHC
T ss_conf 5799998739999999999999997898899657899977137999999999709
|
| >d1ih7a1 c.55.3.5 (A:1-375) Exonuclease domain of family B DNA polymerases {Bacteriophage RB69 [TaxId: 12353]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage RB69 [TaxId: 12353]
Probab=100.00 E-value=0 Score=28268.70 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~fyt~v~~~gn~i~~rg~d~nG~r~~~~~~f~Py~Yv~~~~~~~t~~ksl~G~~v~~v~f~s~~e~r~~~k~~~~~~~ 80 (375)
T d1ih7a1 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGL 80 (375)
T ss_dssp CCCEEEEEEEETTEEEEEEECTTSCEEEEEECCCCEEEEECCTTSCCSCEETTSCBEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 98644022799999999999679989999954730699988999864534148817666746988999999997155543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~~~~~~~~~~i~d~~~~~~~~~~~~~~~~~~DIE~~~~~~~p~~~~~~~~i~~I~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1ih7a1 81 EALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVE 160 (375)
T ss_dssp CCBSCCCHHHHHHHHHTCSCCCCCGGGSCEEEEEEEECCSSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 11256641201012357654566754220455788970576656864232100011246615880999996377756654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~sE~eLL~~F~~~~~~~dPDiitGwN~~~FD~pYL~~R~~~~~~~~~~~ 240 (375)
T d1ih7a1 161 EWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAK 240 (375)
T ss_dssp CCCHHHHHSCTTTTCCCCCHHHHTTEEEEEESSHHHHHHHHHHHHHHSCCSEEEETTTTTTHHHHHHHHHHHHHCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHH
T ss_conf 32212233311124555655567985999829999999999999876498899871777887099999998640100233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~D~~~~~~~~~~~~~~s~~l~~v~~~~l~~~K~~~~~~~~~~~~~d~~~~ 320 (375)
T d1ih7a1 241 RLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRY 320 (375)
T ss_dssp GGSTTSCEEEEEEECSSCEEEEEEETTCEEEEHHHHHHHHSSCCCSCCSHHHHHHHHTCCCCCCCSSCGGGHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
T ss_conf 44423785079998512554011035640002899998753023210005678888751466557555999987494686
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------9
Q 003615 112 ------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------C 112 (807)
=
T Consensus 321 ~~Y~~~D~~L~~~L~~kl~~i~~~~~~a~~~~v~~~~v~~q~~~~~~li~~~~~~ 375 (375)
T d1ih7a1 321 ISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKE 375 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSCGGGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6520998999999999872899999999987959899738999999999999529
|
| >d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=28272.39 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~v~~f~e~~~~d~~lvGGK~AnLgel~~~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~~l~~l~~~~~~~~~ 80 (375)
T d1kbla3 1 AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFG 80 (375)
T ss_dssp CCCEEEGGGCCGGGHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSCBT
T ss_pred CCEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97789887799023643828899899999783998998885099999999826657487999999999866643275446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (375)
T d1kbla3 81 DTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE 160 (375)
T ss_dssp CSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 54320121010013432100014676630350456667651343233211310255542000011015678888876653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~~~~~~~i~~~~glg~~vv~ 240 (375)
T d1kbla3 161 EKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQT 240 (375)
T ss_dssp HTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEC
T ss_conf 04337777767888999999999999875148865553024445530146773146655554420341466666630102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~eLa~~a~~iE~~yG~PqD 320 (375)
T d1kbla3 241 MVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQD 320 (375)
T ss_dssp CCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSSCCEEGGGHHHHCHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 21057774226641245675444321122000013466642431226654431321808999999999999998199614
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------9
Q 003615 112 ------------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------------C 112 (807)
-
T Consensus 321 IEWAi~dG~l~ILQaRPv~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T d1kbla3 321 MEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL 375 (375)
T ss_dssp EEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHHSCGGGGGGG
T ss_pred EEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC
T ss_conf 6999999989999766788657869999999998699799999872794211229
|
| >d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: MdoG-like domain: Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28203.34 Aligned_cols=1 Identities=0% Similarity=-1.125 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 F~f~~l~~~Ar~lA~~py~~p~~~lP~~l~~L~Yd~yr~Irf~~~~alW~~~~~~f~v~~fh~G~~f~~pV~i~~V~~g~ 80 (374)
T d1txka2 1 FSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA 80 (374)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCCCCCCCC----CHHHHTTCEECGGGCBTTTSSCSCEEEEEECBTTBCSCBEEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf 98799999999985189889876689878729998971636486521105799998787627876679877999970995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~i~fd~~~F~y~~~~~~~~~~~~~GfAGFRl~~pln~~~~~de~~~FlGASYFRavg~g~~YGlSARGLAIdTa~~~g 160 (374)
T d1txka2 81 VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSG 160 (374)
T ss_dssp EEECCCCGGGEECTTSCCCTTTSTTCCEEEEEEEECSSCTTCCEEEEEEESTTEEEECCTTCCCCCEEESCEESTTCTTC
T ss_pred EEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHEEEECCCCCCCCCHHHEECCCCCCCC
T ss_conf 68810188996678877784556678730599963467887443167771620224534897366311010005799987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 EEFP~F~~FWle~P~~~~~~~~vyALLDspSvtGAYrF~i~PG~~t~~dV~a~Lf~R~~v~~lGiAPLTSMf~~ge~~~~ 240 (374)
T d1txka2 161 EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPS 240 (374)
T ss_dssp CBCCEEEEEEEECCCTTCCCEEEEEEEEETTEEEEEEEEEECSSSEEEEEEEEEEESSCCSCEEEEEEEECEEEBTTBCC
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf 67987748996657899976999999239741007999997599889999889980676121350211365306898899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~dD~RPeVHDSDGL~i~~g~GE~iWRPL~NP~~l~~S~f~d~~p~GFGLlQRdR~F~~YqD~ea~Ye~RPSlWVeP~gd 320 (374)
T d1txka2 241 PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE 320 (374)
T ss_dssp SSCCSCSCEESCCEEEEECTTSCEEEEECCCCSSCEEEEEEEESCCEEEEECCCCCGGGTCCTTTCGGGCCEEEEEESSC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEECCCCHHHHCCCHHHHCCCCEEEEEECCC
T ss_conf 88987875525664379737996782368898862175675589863233613777232306413233487378876676
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
.
T Consensus 321 WG~G~V~LvEIPT~~E~~DNIVAfW~P~~~~~~G~~~~f~Yrl~W~~~~p~~h~ 374 (374)
T d1txka2 321 WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHA 374 (374)
T ss_dssp CCEEEEEEEECCCSCTTSCCEEEEEEESCCCCTTCEEEEEEEEEEESCGGGGSC
T ss_pred CCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 778679999768997243658999767887899996989989974789876679
|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28195.20 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 v~rGL~Gv~v~eS~Is~IDg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~LP~~~el~~f~~~l~~~~~lp~~~~~~l 80 (374)
T d1ioma_ 1 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESF 80 (374)
T ss_dssp CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99888998485655636748988899988559998703999999999978969799999999999997047988898999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~p~~~~pm~~l~~~vs~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~s~a~n~l~m~~ 160 (374)
T d1ioma_ 81 KRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMAN 160 (374)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 85343421157777766652125752223310689999998624305788899998469877788603679999877623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~p~~~~~~~l~~~lvl~aDHg~n~St~aaR~~aSt~~d~~~av~agl~al~GplhGga~~~~~~~l~e~~~~~~~~~~ 240 (374)
T d1ioma_ 161 GVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREW 240 (374)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
T ss_conf 89999899999875613452588765122422554058747788888887337866786528999999850675354999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 v~~~l~~~~~i~GfGH~vy~~~DPRa~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~pNvd~~~~~l~~~l 320 (374)
T d1ioma_ 241 VREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDL 320 (374)
T ss_dssp HHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99998678877776764333553237999999998776427722789999998432430266898878689999999984
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
=
T Consensus 321 Gip~~~~~~lf~i~R~~Gw~AH~~E~~~~~~~l~RP~~~Y~G~~~r~~~p~~~R 374 (374)
T d1ioma_ 321 GFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 374 (374)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSSCCCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 988565559999999999999999998557985277540069999988676669
|
| >d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NagB/RpiA/CoA transferase-like superfamily: NagB/RpiA/CoA transferase-like family: IF2B-like domain: Initiation factor 2b species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=0 Score=28193.09 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~l~si~~~~~~v~ilDQ~~LP~~~~~~~~~t~~~v~~AIk~M~VRGAPaIgvaaA~glala~~~~~~~~~~~s 80 (374)
T d2a0ua1 1 MSKPHHATLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKS 80 (374)
T ss_dssp CCCCSSCCCCSEEEETTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99887895016999699999985788998179999699999998856370259429999999999999985222753001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~el~~~L~~a~~~L~~sRPTAVNL~nAv~rv~~~i~~~~~~~s~~e~~~~ll~~A~~i~~eD~~~n~~Ig~~Ga~li~e 160 (374)
T d2a0ua1 81 GREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILA 160 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999985597542256899999999864287778999999999999999999999999999978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~ilThcn~g~Lat~~~gtal~~i~~a~~~gk~~~V~v~EtRP~~qG~rlta~~L~~~gi~~t~i~Dsa~~ 240 (374)
T d2a0ua1 161 AAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAAS 240 (374)
T ss_dssp HHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHH
T ss_conf 88621788732676416753375113224677678997698617998046433464689999998616771899545256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~m~~~~v~~VivGad~v~~nG~v~nkiGT~~~A~~A~~~~vP~~v~a~~~k~~~~~~~~~~i~ie~r~~~ev~~~~~~~ 320 (374)
T d2a0ua1 241 SLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTK 320 (374)
T ss_dssp HHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBCTTTC
T ss_pred HHHHCCCEEEEEECCEEEEECCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66205642589852318984697886246499999999749988999115642767799775646678967734334566
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~v~np~fD~tP~~lIt~~iiTe~G~~~P~~~~~~~~~~~~~~~~ 374 (374)
T d2a0ua1 321 QRVVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAASAPYYDIASIIAQA 374 (374)
T ss_dssp CBCSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSSSSCCCHHHHHHCC
T ss_pred CEECCCCCCCCEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 120257888602486831789699499788889861655467721479896239
|
| >d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase homolog WlaK (PglE, Cj1121c) species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=28191.95 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~e~~~~~~~l~~~~~~~~G~~~~~fE~~~~~~~~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~ 80 (374)
T d1o69a_ 1 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY 80 (374)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 93899999999639807899899999999999978295999678799999999986988839999499661743799843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~ 160 (374)
T d1o69a_ 81 LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT 160 (374)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEECCEECCC
T ss_conf 44505734665321012123342100001233201111133310336888987651694410222342145678840688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~gd~~~fSf~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~ 240 (374)
T d1o69a_ 161 FGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLK 240 (374)
T ss_dssp SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 77557894257646534665222133689998530222233333333333458864244624566667777665431004
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~ 320 (374)
T d1o69a_ 241 KREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL 320 (374)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 67899998864024323333456787773140233034433224310000000010001210999999999879987873
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
=
T Consensus 321 y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk 374 (374)
T d1o69a_ 321 WKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 374 (374)
T ss_dssp CCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 854342966534787899899999839898969887799999999999999979
|
| >d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Hect, E3 ligase catalytic domain superfamily: Hect, E3 ligase catalytic domain family: Hect, E3 ligase catalytic domain domain: WW domain-containing protein 1, WWP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28191.63 Aligned_cols=1 Identities=0% Similarity=-0.859 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~f~~~~~~~~~~~~~~i~V~R~~l~~d~~~~l~~~~~~~l~~~l~V~F~gE~g~D~GG~~rEff~~l~~el 80 (374)
T d1nd7a_ 1 HMGFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEV 80 (374)
T ss_dssp CCTHHHHHHHHHHHHHHTCCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGSEEEEEETTTCCCCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 96378999999988761689885599976565899999999716989847876999789874478711999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~p~~~lf~~~~~~~~~~~~~p~~~~~~~~~~~f~~lG~lig~al~~~~~~~~~f~~~f~k~Llg~~~t~~DL~~iD~~~ 160 (374)
T d1nd7a_ 81 LNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160 (374)
T ss_dssp TCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHH
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCHHH
T ss_conf 08866875664798855355874436805899998857999999984961387756899988549989899998857898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~sl~~l~~~~~e~~~l~l~f~~~~~~~~~~~~~eL~~~G~~~~VT~~N~~~yv~~~~~~~l~~~~~~~~~afr~Gf~~v 240 (374)
T d1nd7a_ 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEV 240 (374)
T ss_dssp HHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 87499998546410466035787751278742254478997652068789999999999997211789999999869876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ip~~~l~~f~~~eL~~licG~~~id~~~l~~~~~y~gy~~~s~~i~~fw~vl~~~t~ee~~~fL~FvTGs~rlP~~G~~~ 320 (374)
T d1nd7a_ 241 VPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAE 320 (374)
T ss_dssp SCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEESCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGG
T ss_pred CCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCHHH
T ss_conf 79898764889999986279987788999643261367899889999999877069999987446636899889864565
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
=
T Consensus 321 l~~~~~~~~~~i~~~~~~~~LP~A~TCfn~L~LP~Yss~e~l~ekL~~AI~~~e 374 (374)
T d1nd7a_ 321 LMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374 (374)
T ss_dssp CEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHSCC
T ss_pred HCCCCCCCCEEECCCCCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 435678875131468999999705440267669898899999999999997149
|
| >d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Morphinone reductase species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=28191.29 Aligned_cols=1 Identities=0% Similarity=-0.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~P~LF~Pl~Ig~~~lkNRiv~apm~~~~~~dg~~t~~~~~yy~~rA~gGlii~e~~~V~~~~~~~~~~~~i~~d~~ 80 (374)
T d1gwja_ 1 TSFSNPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQ 80 (374)
T ss_dssp CCCCCCCTTSCEEETTEEESCSEEECCCCCCCCSSSCCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCBTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 99994999998418998978875874458988999998799999999984878799974798886578889873555554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ 160 (374)
T d1gwja_ 81 EAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDGIPG 160 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 15666689998605862676554168655545588887100035556667655443565544567878860049999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ii~~f~~AA~rA~~AGfDgVEIH~ahGYLl~qFLSp~~N~RtDeYGGSlENR~Rf~~EIi~aIR~~vg~~~v~~r~~~~~ 240 (374)
T d1gwja_ 161 IVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFL 240 (374)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 99999999999998099888732220346778887535764454343121100567889998998838753225553100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~ld~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~ae~~l~~g~aD 320 (374)
T d1gwja_ 241 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD 320 (374)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHTCSEEEEECSCBTTBCCCCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC
T ss_conf 23687653247888876413110472277751576457886524999999998738878997895999999999869974
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
-
T Consensus 321 lV~~gR~~iadPd~~~K~~~G~~l~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~ 374 (374)
T d1gwja_ 321 AVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGAEVGYTDYPFLDNGHDRLG 374 (374)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCCCCCCCSSCCCC
T ss_pred EEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 844669998792299999759988888841125799988387888542235319
|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28190.13 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~DPR~iLkk~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T d2bvca2 1 SRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKG 80 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBGGGTTCSBCTTSCBCCCCCBCTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98869999999999997799870357726589997145445566776201363000246787656788887786656566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~~l~~~Gi~~~~~~~E~~~~gQ~Ei~~~~~~~l~aAD~~~~~k~~ik~vA~~~G~~atFmp 160 (374)
T d2bvca2 81 GYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMP 160 (374)
T ss_dssp CSCBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCS
T ss_pred CEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 50002000226899999998787469763763215666825887067630668999999999999999986397477764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 KP~~~~~Gsg~H~h~Sl~~~~~n~~~~~~~~~~lS~~~~~~iaGlL~h~~~l~al~~P~vNSY~Rl~~~~~ap~~~~Wg~ 240 (374)
T d2bvca2 161 KPLFGDNGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ 240 (374)
T ss_dssp CSSTTSCCCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSTTHHHHSSTTSSSCSBCCEEE
T ss_pred EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECC
T ss_conf 31567887660079974158988655566655567999999999985209888987378742653489875644774046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~nR~~~iRi~~~~~~~~~~riE~R~~da~aNPYL~lAailaagl~Gi~~~l~p~~p~~~~~~~~~~~~~~~~~~LP~sl~ 320 (374)
T d2bvca2 241 RNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASIPQTPTQLS 320 (374)
T ss_dssp TCTTSSEEECCCCSCTTSCCEEECSCCSSSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGCCHHHHHTSCBCCSSHH
T ss_pred CCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH
T ss_conf 76655311024468975626885278833107899999999866656412344687778513299657658132501799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
-
T Consensus 321 eAl~~l~~d~~~~~~~~~~g~~~i~~y~~~Kr~~E~~~~~~~vt~wE~~~Y~~~ 374 (374)
T d2bvca2 321 DVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEFALYYDV 374 (374)
T ss_dssp HHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHHHHHTTC
T ss_pred HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
T ss_conf 999999759787876563789999999999999999999689999999604899
|
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28189.86 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~s~~~vd~~N~~i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~ 80 (374)
T d1rp4a_ 1 GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM 80 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 97878999899988999986378960434338899898999432574998998803775565861024101046664112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~~~ 160 (374)
T d1rp4a_ 81 KEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGE 160 (374)
T ss_dssp EECCTTCGGGSBHHHHSSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCTTS
T ss_pred HHCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 21145653002204033320355554431101334456777754766300856235888873788999999975789876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~~~~ 240 (374)
T d1rp4a_ 161 TGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240 (374)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHSEEETTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 43107788999988888888999998764167767637899999999736838889899999999999998888886467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~l~~~~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~CeKCrLwGKlQt~GlgtALKIL 320 (374)
T d1rp4a_ 241 FCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKIL 320 (374)
T ss_dssp TTSSTTTTHHHHHHHHHHTTCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77877789999999999871666678888538841399999999999999999716676376756899887799999998
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
=
T Consensus 321 f~~~~~~~~~~~~~~~~L~R~ElvALiNt~~rlS~SI~~v~~F~~m~~~~~~~~ 374 (374)
T d1rp4a_ 321 FEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLLER 374 (374)
T ss_dssp HHHHTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 535553346766664554599999999999999999999999999999764129
|
| >d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Sialidase 2 (Neu2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28186.86 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~p~~~~~~~f~~g~~~yRiP~lv~~~~g~~l~A~a~~r~~~~d~~~~~iv~~rS~D~G~T~~~~Ws~~~~v~~~~~~~~~ 80 (374)
T d1so7a_ 1 LPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHR 80 (374)
T ss_dssp CCCSEEEEEEECTTCCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEGGGTEEEECCCEECTTSCCTTEE
T ss_pred CCCCCEEEEEECCCCCEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
T ss_conf 99431267768895368647799985999999999687677668987699999637883043466798994778989955
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~p~~~~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~p~~i~~~~~~~~~~~~~~~~~~~~~ 160 (374)
T d1so7a_ 81 SMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGH 160 (374)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEECHHHHHGGGGGGEEEEEECSSC
T ss_pred EEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 56212789899997999998506877653224688885408999688886335686026610145435774366520233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~e~~~~e~~~~~~~~~~~~~~~~~~~r 240 (374)
T d1so7a_ 161 CLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRAR 240 (374)
T ss_dssp CEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCCCSBSEEEEEEEEEEC--CEEEEEEEEESSSEE
T ss_pred CEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE
T ss_conf 12664048868866676516766678971499999358754110156568888422588851456643677425478967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~S~D~G~tW~~~~~~~~l~~~~~~~~~~s~i~~~~~~~~~~~~~~~ll~~~p~~~~~r~~~~l~l~~S~D~G~tW~~ 320 (374)
T d1so7a_ 241 VQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSE 320 (374)
T ss_dssp EEEEESSTTSSCCCCEEEEEEECCTTTCCCCEEEEEECCCC----CSEEEEEEEECCSSSSEEEEEEEESSTTCGGGCCC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEECCC
T ss_conf 99996279966543202333448888885314898335434444688369983788988887608999998889916478
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~i~~g~~~YS~~~~~~dg~~~~~~i~~lyE~~~~~~i~f~~~~l~~~~~~~~ 374 (374)
T d1so7a_ 321 PVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEY 374 (374)
T ss_dssp CEEEEEEEEEEEEEEEEEECTTSSEEEEEEEEETTTTEEEEEEEEHHHHCGGGC
T ss_pred CEEECCCCCCCCHHEECCCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCCC
T ss_conf 548688997684525867998885699999956997657999989999175779
|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Psychrophilic chitinase B species: Arthrobacter sp., tad20 [TaxId: 1667]
Probab=100.00 E-value=0 Score=28182.73 Aligned_cols=1 Identities=0% Similarity=-1.192 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~ 80 (374)
T d1kfwa1 1 PLTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADF 80 (374)
T ss_dssp CCBSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHH
T ss_pred CCCCCCCCCEEEEEECCCEECCCCCCHHHCCCCCCHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98888888789999895400588898634767798524987999123014875532024311134778752347606541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lK~~~p~lKvllSiGGw~~s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l~ 160 (374)
T d1kfwa1 81 GMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLP 160 (374)
T ss_dssp TCCCCTTTSSSSSCCCTTCSCCHHHHHHHHHHTTCTTCEEEEEEECSSSCTTHHHHTSSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33334444456655653321013689999998618997599998189877763111047889999999999999981975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~~~~k~~~Ls~A~~~~~~~~ 240 (374)
T d1kfwa1 161 NFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI 240 (374)
T ss_dssp EETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
T ss_conf 21111232233244663011226514446777777887648999999999999999987563575389999852540011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlGipyd~ 320 (374)
T d1kfwa1 241 DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADN 320 (374)
T ss_dssp HHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEEEESCC
T ss_pred CCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCC
T ss_conf 23473266452004799997144046789987776675779977877777770699999999987999899389846799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------9
Q 003615 112 -----------------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------------C 112 (807)
=
T Consensus 321 ~~si~~K~~y~~~~glgG~m~W~~~~D~~g~Ll~a~~~~l~~~~~~~~~~~~p~ 374 (374)
T d1kfwa1 321 IATTKQKTDYIVSKGLGGGMWWELSGDRNGELVGAMSDKFRAAAPGPVTEAAPP 374 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGCTTCHHHHHHHHHHHHSSCCSCCCBCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999998569953999975579997499999998458899987788998
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=28116.12 Aligned_cols=1 Identities=0% Similarity=0.038 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQFP 80 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99899989688999999999868998999958998858668954299899538658727887999999983885212332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1seza1 81 LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPF 160 (373)
T ss_dssp SSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHTTHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCHH
T ss_conf 11233212244333221122134442122211355566788887642000000111000000012223432001011012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~ 240 (373)
T d1seza1 161 VAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKD 240 (373)
T ss_dssp HHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 21010233110025567899987641001445567876404322222101234333203540453034612799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~~~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~D~Vi~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~ 320 (373)
T d1seza1 241 LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVYGH 320 (373)
T ss_dssp SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCCT
T ss_pred HCCCEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50655764987899999678542113552786124789746998899999986577653365557775332330100245
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~t~~pglf~aGd~~~g~~~~~A~~~G~~aA~~i~~~L~~~~ 373 (373)
T d1seza1 321 NYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLESVS 373 (373)
T ss_dssp THHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78867626423478999999972578765399999999999999999875289
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28115.80 Aligned_cols=1 Identities=0% Similarity=-1.292 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~MkkI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 1 GMKRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99769999873697999999999997189998899992688255637122408886656787888887789999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLK 160 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHH
T ss_conf 66664037640011136753103778898762122241343455433567616666655223443255122156666666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~ 240 (373)
T d1v4va_ 161 EGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVV 240 (373)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHH
T ss_pred HCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 30454213442662155777654311000223445531688426555312789999999986533565035640342221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~ 320 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEG 320 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHH
T ss_pred HHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCEEEECCCCHHHHCCHHHCCCEEEECCCCCCHHHHHCCEEEECCCCHHH
T ss_conf 03555543033320011100078888876430168506412222003205868984887669878962904975899999
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~~~~~~~~~ 373 (373)
T d1v4va_ 321 VYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLGPRPEDWLP 373 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSSCCCCCCCC
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999719898864024889898987999999999998489989878899
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=100.00 E-value=0 Score=28115.39 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~a~~~~~~~~~a~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l 80 (373)
T d2madh_ 1 SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEF 80 (373)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEE
T ss_conf 90565434310132145678986563018999789997342257876599998999979999957988607986899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~ 160 (373)
T d2madh_ 81 ALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD 160 (373)
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEE
T ss_conf 99960577532124531899997778938889726885136851689708998589937999986987467762368728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 240 (373)
T d2madh_ 161 DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred EEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 99824520699962899199999479939999747742667886300366753043458878994299925896599997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~ 320 (373)
T d2madh_ 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV 320 (373)
T ss_pred CCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 68990789776305647578664136741335771499759995488824786258986999989999698986689982
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~~ 373 (373)
T d2madh_ 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNEA 373 (373)
T ss_pred EEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 58999989998999996799929999999998999988889898189984689
|
| >d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Amide receptor/negative regulator of the amidase operon (AmiC) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=28113.85 Aligned_cols=1 Identities=0% Similarity=-0.162 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~pvIG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~GGi~Gr~i~l~~~D~~~~~~~a~~~a~~Li~~~~V~aiiG~~~S~ 80 (373)
T d1qo0a_ 1 RPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 80 (373)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHTTCBTTBCCEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_conf 98899972886842655299999999999998850996886889999769999999999999999608966998041333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~av~~~~~~~~vp~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~~vaii~~d~~~g~~~~~~~~~~~~~ 160 (373)
T d1qo0a_ 81 TRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQ 160 (373)
T ss_dssp HHHHHHHHHHHHTCEEEECSCCCCCCCCTTEEECSCCGGGTHHHHHHHHHHHSCSEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 24456899997199678223354345687336604671787777888987515742553467764037888653111220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~G~~vv~~~~~~~~~~~~d~~~~~~~i~~~~pd~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (373)
T d1qo0a_ 161 HGGTVLEEIYIPLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDV 240 (373)
T ss_dssp TTCEEEEEEEECSSCCHHHHHHHHHHHHHHTCSEEEEECCSTTHHHHHHHHHHHHCSSCCCCEEESSCCHHHHTTSCHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 36733678971676442046799999875188732320235047779999998457656640125545248776444443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~aY~a~~~~a~Ai~~ag~~d~~~i~~aL~~~~~~~~~G~ 320 (373)
T d1qo0a_ 241 AEGQVVVAPYFSSIDTPASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGNWRVEDVQRHLYDIDIDAPQGP 320 (373)
T ss_dssp HTTCEEEESCCTTCCSHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHSSCCEEETTEE
T ss_pred HCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCEE
T ss_conf 05720102442000027789999999987398788770799999999999999998689999999999855953078365
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 i~f~~~~~~~~~~~~i~q~~~dg~~~vv~~~~~~v~p~p~~~~~~~~~w~~~~ 373 (373)
T d1qo0a_ 321 VRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASM 373 (373)
T ss_dssp EEECTTTSBEEBCCEEEEECTTSCEEEEEECSSCBCCCTTCCSCCGGGGGGGC
T ss_pred EEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99838998346866999993699589996069836799974888865455569
|
| >d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Dextranase, catalytic domain domain: Dextranase, catalytic domain species: Penicillium minioluteum [TaxId: 28574]
Probab=100.00 E-value=0 Score=28113.74 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~ga~p~~~~d~t~a~~~a~~~~~~~~~~~vvy~PpG~y~~g~~~~~~~~~~~~~g~~l~~~~~~~y~~~G~~~~~~i~ 80 (373)
T d1ogmx2 1 LPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIE 80 (373)
T ss_dssp CCGGGSCCCCTTTEEECCSEEECTTTTCSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESCEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCEEECCCEEEECCCEEECCCCEEEECCCCCEEEEEEE
T ss_conf 98886589898846875310465244689888998994638387430474588738669636743776079857986798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~n~~i~giti~~s~~~~~~~~~~~~v~i~ 160 (373)
T d1ogmx2 81 YFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQ 160 (373)
T ss_dssp ECCSSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEESCCCSSEEEEEESCEEECCSSCCEEECSSSCEEEE
T ss_pred ECCCCEEEEECCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEECCCEEEEEECCCCEEEEE
T ss_conf 63765089971207838866632566543223346776567755899984227999677997899169987268759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~i~~~~~~~~n~dgi~~~~~~~i~~~~~~~gDD~i~~~s~~i~v~n~~~~~~~~~~~~~~g~~g~~i~nv~v~ni~v~ 240 (373)
T d1ogmx2 161 ISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVI 240 (373)
T ss_dssp EEEEEEECCCSTTCCCCBCCTTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 78999668877787005324878999528963887799657988999799978875247883667887631599915998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ni~f~nI~~~~~~~~~i~~~~~~~~~~~~i~nV~i~nI~~~~~~~~ 320 (373)
T d1ogmx2 241 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGT 320 (373)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEEEEEEEEEEECSSBCEEEEECCSEEEEEEEEEEEEETTCBCCSTTCT
T ss_pred CCEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 85611220033434443322112100689869992899919998753676999876788888332189984499804571
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~Ni~i~~~~i~~~n~~~~~~~~~~~~g~~~~~~~~~ 373 (373)
T d1ogmx2 321 GESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS 373 (373)
T ss_dssp TCEEECCCTTCCEEEEEEEEEETTEECCTTTCSTTSSSCEEECGGGTTTCEEC
T ss_pred EEEEEECCCCCCCCEEEECEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 66875014687388578676991969864777777321678777504531229
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Probab=100.00 E-value=0 Score=28113.52 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~D 80 (373)
T d1miqa_ 1 HLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFD 80 (373)
T ss_dssp CEEEEEEEECHHHHHHHHSCHHHHHHHHHHHHHHHTTSCTTCCCCCBTTBCCCGGGTBCEEEECCCEETTTTEECCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEE
T ss_conf 92233303582467787766666889887644331134232122256787687255169789999998799989999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 TGSs~lWv~~~~C~~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1miqa_ 81 TGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPI 160 (373)
T ss_dssp TTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTH
T ss_pred CCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCC
T ss_conf 99625189879999743468982389889853388963899928817999999788897674267668999840356753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~~~~~w~ 240 (373)
T d1miqa_ 161 YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQ 240 (373)
T ss_dssp HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCEEEEEECCCCCEEE
T ss_conf 23566563566444433578854301124443225653278871367888715642677830114424687114552489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~P~itf~f~g~~~~l~p~~y~ 320 (373)
T d1miqa_ 241 IDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYM 320 (373)
T ss_dssp EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSE
T ss_pred EEEEEEECCEECCCCCEEECCCCCEECCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEE
T ss_conf 99998778675487416862677213157899999999839755068970675344688863999999999998889906
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak~ 373 (373)
T d1miqa_ 321 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 373 (373)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCEEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCC
T ss_conf 88996799899999998888999899717943769999999999999998079
|
| >d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28112.53 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~s~~~~~~l~~~~~dwa~~hGl~~~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~n~L~~~vS~D~~~~~~f 80 (373)
T d1m0wa2 1 PSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSY 80 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCEECCTTGGGCTTEEEECCEESSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 98799999999999999971947436877789886145787952776888999999999999999999997240426899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 L~~~l~~~~~~D~~Ft~~L~~i~~~v~~~g~~~~q~i~Lgl~RSDYMld~~~~~~~~KQVE~NTIa~sfg~ls~~v~~lH 160 (373)
T d1m0wa2 81 LHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRLGIFRSDYLIDKKKGTEQIKQVEFNTVSVSFAGLSEKVDRLH 160 (373)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHTSCCSSCCCCCEEEEEEEEEEEEEETTEEEEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHH
T ss_conf 99998767405889999999999999854446243258744301321477666523441230020020121888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~l~~~~~~d~~~~~~~d~~~~~~~~~~~le~~~a~~~~~~l~g~KKvQq~La~pgvLe~Fl~d~~~~~~lr~tF~~ly~ 240 (373)
T d1m0wa2 161 SYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYP 240 (373)
T ss_dssp HHHHHTTSSCTTSCSSCGGGBCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTTSHHHHTTTCCCHHHHHHHHTTCCCEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 99985557788775016886545155189886666466776467652672103668898867988999999998504786
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Ld~~~~g~~~~~~Al~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~e~~ayILMerI~Pp~~~~~~~~r~~~~~~~~ 320 (373)
T d1m0wa2 241 LDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEP 320 (373)
T ss_dssp CSSSHHHHHHHHHHHHCGGGEEEEESSCSSCCCEEGGGHHHHHHTSCGGGGGGEEEEECCCCCCBCSCCEEETTEEECCC
T ss_pred CCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECC
T ss_conf 78502128999998619153897455557665401479999987478444113307854179988875997299011277
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------9
Q 003615 112 ----------------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------------C 112 (807)
.
T Consensus 321 ~vSELGifG~~l~~~~~v~~N~~~G~LlRTK~~~~nEGGVaaG~g~lDS~~L~ 373 (373)
T d1m0wa2 321 IISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDSIILY 373 (373)
T ss_dssp BEEEEEEEEEEEECSSCEEEEEEEEEEEEEECCEEETTEEEECCEEECCEEEC
T ss_pred EEECCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCEECCEEECCCHHCC
T ss_conf 32033041899978977997165028896279988876810354223422009
|
| >d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Queosine tRNA-guanine transglycosylase species: Zymomonas mobilis [TaxId: 542]
Probab=100.00 E-value=0 Score=28044.18 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~Fei~~~d~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gglh 80 (372)
T d1r5ya_ 1 RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLH 80 (372)
T ss_dssp CCSCEEEEEEEETTEEEEEEEETTEEEEESEEECBCTTSSCTTCCHHHHHHTTCSCEEEEHHHHHHTTCHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCEEEEEEEECCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHCCCHH
T ss_conf 99607999965585004899979977679978754778808847999999728988833188887587617877426513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~f~~~~~~iltdsGg~q~~sl~~~~~~~~~gv~f~s~~~g~~~~ltpe~~i~~q~~ig~DI~~~Ldd~~~~~~~~~~~~~ 160 (372)
T d1r5ya_ 81 SFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAAS 160 (372)
T ss_dssp HHHTCCSCEEEECSHHHHC-CC-CCEEETTEEEC---------CBCHHHHHHHHHHHTCSEEECCCCCCCSSCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 34204565200247654323223455577885353226872111000779999985088467522446653101678899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~rt~~w~~~~~~~~~~~~~~~~~~~lfgivqGg~~~dlR~~s~~~l~~~~~~G~aiGgl~~~~~~~~~~~~v~~~~~~ 240 (372)
T d1r5ya_ 161 SMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPM 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999999999875055667666321131541265688889999986213732122445675067788899850200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 Lp~~kPr~l~Gvg~P~~il~~V~~GvD~FD~~~p~r~Ar~G~alt~~g~~~l~~~~~~~d~~Pl~~~C~C~~C~~~sraY 320 (372)
T d1r5ya_ 241 LPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAY 320 (372)
T ss_dssp SCTTSCEEETTCCSHHHHHHHHTTTCCEEECSHHHHHHHTTEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHHCCHHH
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHH
T ss_conf 12011022047898789888360589954543113111136157259832321232335689869898992325159999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
.
T Consensus 321 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~ 372 (372)
T d1r5ya_ 321 IHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF 372 (372)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9877638836899999999999999999999999985999999999999649
|
| >d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: HDAC homologue species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=28040.33 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~k~~li~~~d~~~~~~g~~HPe~p~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~~ 80 (372)
T d1c3pa_ 1 KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVPKG 80 (372)
T ss_dssp CCEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCCTT
T ss_pred CEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 90899968201587897843959799999999999769987880771898999999871899999999974544467522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~p~~~~~~~~a~~~~g~~~~a~~~~~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiaa~~l~~~~~~R 160 (372)
T d1c3pa_ 81 AREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKGFKR 160 (372)
T ss_dssp HHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 31014688767878889999998753358897653224542241246534421024313640460999999998744674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 V~ivD~DvHhGnGtq~if~~d~~V~~~SiH~~~~~~~p~~tG~~~e~G~~~g~g~~~NiPL~~g~~D~~y~~~~~~~l~p 240 (372)
T d1c3pa_ 161 ILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEI 240 (372)
T ss_dssp EEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 47874345677762577761477543000257777788888772236787665412414488655628999999986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~f~Pd~IvvsaG~D~~~~Dplg~l~lt~~~~~~~~~~~~~~~~~~~~vleGGY~~~~~a~~~~~~~~~l~g~~~~~~ 320 (372)
T d1c3pa_ 241 VKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEK 320 (372)
T ss_dssp HHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99866976899978816677686568868888999999999985899699975878588999999999999829999845
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 372 (372)
T d1c3pa_ 321 LNNKAKELLKSIDFEEFDDEVDRSYMLETLKDPWRGGEVRKEVKDTLEKAKA 372 (372)
T ss_dssp CCHHHHHHHHHSCCCCSSTTCCCGGGGGCSSCCCCCCCCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 6877887631588777424467033200247855535778899999998509
|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Germin/Seed storage 7S protein domain: Oxalate decarboxylase OxdC (YvrK) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28039.47 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~g~~~~gp~~~~~~~~~~d~~~~~~td~g~~~~~~~~f~~~~~~~~~gg~~r~~~~~~lp~~~~~a~~~~~L~ 80 (372)
T d1j58a_ 1 PQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKFSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLK 80 (372)
T ss_dssp CCSEETTEECCCCSCCCHHHHHHCHHHHSCCTTCBSCCCCCEECGGGSCCEEETTEEEEEECTTTCTTCSSCEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHEEEEEC
T ss_conf 98604899998889877666531864458997766755105642133544236797147864443800331100589988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 pga~~~pH~H~~ae~~yVl~G~~~vt~Vd~~G~~~~~~l~~GDv~~~P~G~~H~i~n~~dg~e~l~vf~~~~~~~~~~f~ 160 (372)
T d1j58a_ 81 PGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQ 160 (372)
T ss_dssp TTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEE
T ss_pred CCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEE
T ss_conf 99676873637643899995779999994899489988536988998999779997179995899997788866653043
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~p~evLa~af~v~~~~~~~i~~~e~~i~~~~~p~~~~~~~~~~~~g~~~~~~~~~l~~q~P~~~~gG~~~~~d 240 (372)
T d1j58a_ 161 LTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIAD 240 (372)
T ss_dssp HHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCEECSSEEEEEES
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
T ss_conf 10121359878998761999899863431223312456887423454147788998763230224688415774679926
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~fp~~~~is~~~~~l~PG~~~~~H~Hp~a~E~~yvl~G~g~v~v~~~~g~~~t~~l~~GDv~~iP~g~~H~i~N~g~e 320 (372)
T d1j58a_ 241 STNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDE 320 (372)
T ss_dssp TTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSS
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCC
T ss_conf 33477667506999998899645887799972999999790999998579806899825985899899974999987999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
-
T Consensus 321 ~l~~l~vf~s~~~~~i~~~~~l~~~P~~vv~~~~~~~~e~~~~l~~~k~~vv 372 (372)
T d1j58a_ 321 PLVFLEIFKDDHYADVSLNQWLAMLPETFVQAHLDLGKDFTDVLSKEKHPVV 372 (372)
T ss_dssp CEEEEEEESSSSCCCEEHHHHHHTSCHHHHHHHHTCCHHHHTTCCSSCCSBC
T ss_pred CEEEEEEECCCCCCEEEHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 8899999789996545687876549999999885969999998875687669
|
| >d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA polymerases {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage T4 [TaxId: 10665]
Probab=100.00 E-value=0 Score=28038.83 Aligned_cols=1 Identities=0% Similarity=-0.094 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~fytnv~~~gn~il~rg~~~~G~r~~~~~~f~Py~y~~~~~~~~~ksl~G~~v~~v~f~s~~~~r~~~~~~~~~~~~~~ 80 (372)
T d1noya_ 1 DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFPSMKDARDWMKRMEDIGLEAL 80 (372)
T ss_dssp CCEEEEEEEETTEEEEEEECTTSCEEEEEEECCCSEECGGGGTCSSCTTTTCCCCCEECSSHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEE
T ss_conf 98661369999999999996599799999656058999858997858359908877857999999999997256663464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~die~~~~~~~~~~~~~~~i~~I~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (372)
T d1noya_ 81 GMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDA 160 (372)
T ss_dssp HHHHHHHHHHHHHTCSCCCCCGGGCCEEEEEEEECCSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCSSCCCCCCCH
T ss_pred ECCCCCEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 02343413312316545556623225773022002346688631010000222144159879999962656566556555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~E~~lL~~F~~~~~~~dPDii~G~N~~~FD~pYL~~R~~~~~~~~~~~~~~~ 240 (372)
T d1noya_ 161 KLAAKLDCEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSP 240 (372)
T ss_dssp HHHHSCGGGTCCCCCHHHHTTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGST
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 55433222346665545668759998099999999999999872888799970678616799999987456310111221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~sy~L~~v~~~~l~~~K~~~~~~l~~~~~~d~~~l~~Yn 320 (372)
T d1noya_ 241 IGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYN 320 (372)
T ss_dssp TSCEEEEECCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCCCCCCSSCGGGHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCCCCEEEEECCCEEEEEEHHHEECCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCHHHHHEEC
T ss_conf 26521001101356522564033148975101200002330024344310001146777742249999874925702201
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
=
T Consensus 321 i~D~~L~~~L~~kl~~i~~~~~la~~~gvp~~~v~~~~~~~~~~~~~~l~~~ 372 (372)
T d1noya_ 321 IIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSLKGE 372 (372)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTCCGGGGGCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 9988999999998757999999999989398993749999999999986259
|
| >d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Antitrypsin, alpha-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28038.45 Aligned_cols=1 Identities=0% Similarity=-2.221 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1qlpa_ 1 FNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT 80 (372)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 93220769999999999986129798299878999999999998546799999999709998778689999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~l~~~n~i~~~~~~~l~~~f~~~~~~~f~~~~~~~df~~~~~~~~~iN~wv~~~T~g~i~~~~~~~~~~t~l 160 (372)
T d1qlpa_ 81 LNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVF 160 (372)
T ss_dssp HSCSSCCCCEEEEEEEEEETTCCBCHHHHHHHHHTSCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCSCCCCCCTTCCE
T ss_pred HHCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 53247614451010023316776478999999987275241455444699999999999998579875545678974155
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~f~~~~~~~l~~~~~~lp~~~~~~~~il~~~~~~l~~ 240 (372)
T d1qlpa_ 161 ALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQH 240 (372)
T ss_dssp EEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEECTTCHHH
T ss_pred HHHHHHEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHH
T ss_conf 54323213043113566210445654036885489750000153111014667869995256777259999778679899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~~L~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGl~~~F~~~ad~~~i~~~~~l~vs~v~q~~~i~v~E 320 (372)
T d1qlpa_ 241 LENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDE 320 (372)
T ss_dssp HHHHCCHHHHHHHHHCCCCEEEEEEEECEEEEEEEEHHHHTGGGTCCGGGSTTCCCTTTBSSSCCCCCEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCHHHHHHHCCCHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEEECC
T ss_conf 98764599999998735644789998789985211577877755946554225453176788981566378899999878
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
=
T Consensus 321 ~Gteaaa~t~~~~~~~s~~~~f~~drPFlf~I~~~~t~~iLf~G~v~~Pt~~ 372 (372)
T d1qlpa_ 321 KGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK 372 (372)
T ss_dssp CSSSSCCCCCCCCCCSSCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred CCCCHHHHHEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 8400323210102357899759926998999999899939999992799899
|
| >d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28037.69 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~tp~~~gfrmPaEwe~~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~Ia~~e~V~vl~~~~~~~~~~~~~~~nV~~~~ 80 (372)
T d1vkpa_ 1 RESPAEHGYYMPAEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPEDIRVVE 80 (372)
T ss_dssp CCCGGGGTCBCCCTTSCEEEEEECCCCCTTTSTGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTTSEEEE
T ss_pred CCCHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEE
T ss_conf 97935549976898563615999868998621345556899999999997389849999797999999975746728999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~dD~W~RD~GPifv~~~~~~~~~~~~~~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~lvlEGG 160 (372)
T d1vkpa_ 81 MSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGG 160 (372)
T ss_dssp CCCSSCCHHHHSCEEEECCC-------CCSEEEEEEECCTTTHHHHSSBSCCTTHHHHHHHHHHHHTCCEEEEEEECCGG
T ss_pred CCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 15898788614877998088642334678557860201366655555421345677999987412168744567166389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~ie~dG~GtlltTe~clln~nRNP~~sk~~ie~~Lk~~lGv~~viwl~~g~~~~DdTdGHID~~arFi~~~til~~~~~d 240 (372)
T d1vkpa_ 161 SIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDD 240 (372)
T ss_dssp GEEECSSSEEEEEHHHHTCTTTCTTSCHHHHHHHHHHHHCCCEEEEESCCCTTCTTTTCCGGGTEEEEETTEEEEEECCC
T ss_pred CEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCEEEEEECCC
T ss_conf 77989996299756782077889998999999999986297559997670027988765500058971799079873288
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~y~~~~~~~~~L~~~~d~~g~~~~ii~lp~p~~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (372)
T d1vkpa_ 241 ETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAP 320 (372)
T ss_dssp TTSTHHHHHHHHHHHHHTCBCTTSCBCEEEEEECCSCCBCCHHHHHTSCCCSSBCCCCTTCBCCCCTTCCEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEC
T ss_conf 76855899999999999887505884317983034540003200145334666554568988655347999999999995
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
-
T Consensus 321 ~ygd~~~D~~A~~~l~~~fP~r~Vi~Id~~~~i~~~gG~iHCiT~q~Pa~~~ 372 (372)
T d1vkpa_ 321 QFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPT 372 (372)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTSEEEEETTTHHHHTTTCCTGGGEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 7989430799999999988898799827889998579853575777779999
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28034.48 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1teda_ 1 AQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPAT 80 (372)
T ss_dssp CCCCCCCCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSC
T ss_pred CCCCCCCCCCEEEEEEEEEECCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCC
T ss_conf 99897999844899988996799178399999999860678177899999998359863514516543461445414887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 160 (372)
T d1teda_ 81 IRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNA 160 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
T ss_conf 88888877737999999999999997599988998899964689888668899876514687625766004674179999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 L~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (372)
T d1teda_ 161 LGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTE 240 (372)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCT
T ss_pred HHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999998559976521653112002104777613565655413632047750477645567750587035642168876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l 320 (372)
T d1teda_ 241 DGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 320 (372)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 55456778776320014777999998889999987876399878742232247659999999998198978816568888
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------9
Q 003615 112 ---------------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~~ 372 (372)
T d1teda_ 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR 372 (372)
T ss_dssp HHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECCC
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHEEECC
T ss_conf 4047748879999999999838878899889999995899589876325229
|
| >d1mkfa_ b.116.1.1 (A:) Viral chemokine binding protein m3 {Murid herpesvirus 4, MuHV-4 [TaxId: 33708]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Viral chemokine binding protein m3 superfamily: Viral chemokine binding protein m3 family: Viral chemokine binding protein m3 domain: Viral chemokine binding protein m3 species: Murid herpesvirus 4, MuHV-4 [TaxId: 33708]
Probab=100.00 E-value=0 Score=27968.88 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 hssgvstqsvdlsqikrgdeiqahcltpaetevtecagilkdvlsknlhelqglcnvknkmgvpwvsveelgqeiitgRL 80 (371)
T d1mkfa_ 1 HSSGVSTQSVDLSQIKRGDEIQAHCLTPAETEVTECAGILKDVLSKNLHELQGLCNVKNKMGVPWVSVEELGQEIITGRL 80 (371)
T ss_dssp CCSEEEECCCCTTTSTTHHHHHHHHSSSCCSSTHHHHHHHHHHHHHCTTGGGGGCSEEEEEEEECEEEGGGTEEEEEECC
T ss_pred CCCCCCCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCC
T ss_conf 98774343323888445425665207821003677778899987642887751430244468846569884125500676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 P~Ps~~~~~~~~~vrVLV~AEs~tpee~P~~~~~A~~~m~T~~~~~~LsD~N~~F~s~~~~vW~i~i~k~~VD~~mLT~A 160 (371)
T d1mkfa_ 81 PFPSVGGTPVNDLVRVLVVAESNTPEETPEEEFYAYVELQTELYTFGLSDDNVVFTSDYMTVWMIDIPKSYVDVGMLTRA 160 (371)
T ss_dssp CCSSCCCCTTSCEEEEEEEEECCCCSSCCSSCCCEEEEEECSSCEEEECGGGEEEEETTEEEEEEEEEGGGSSTTCEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEECCEEEEEEECCHHEECHHHHHHH
T ss_conf 77755787667648999995179987880788765441044554785024643787400279999646001122143355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~FL~~~P~~k~T~mi~Y~~TFTWCGeigai~e~~~P~PS~~A~~PVC~~~~RY~~~kF~~~DGC~~Et~~~~~s~i~P~~ 240 (371)
T d1mkfa_ 161 TFLEQWPGAKVTVMIPYSSTFTWCGELGAISEESAPQPSLSARSPVCKNSARYSTSKFCEVDGCTAETGMEKMSLLTPFG 240 (371)
T ss_dssp EESSCCTTCEEEEEEEEETTEEEEEEEEEECTTSCCBCCSEEEEETTSSGGGGSSSTTTTTTTCCGGGTSCCEEECSCTT
T ss_pred HHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEECCCC
T ss_conf 67754767608998436565053403254368778997610038542004665347524136743000555640555578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~P~~qa~mNTC~C~~KY~~~~L~~~~~i~i~~ia~~~~~~~P~YVm~~YF~St~~N~~~~s~~L~~C~~~mtsH~G~~~~ 320 (371)
T d1mkfa_ 241 GPPQQAKMNTCPCYYKYSVSPLPAMDHLILADLAGLDSLTSPVYVMAAYFDSTHENPVRPSSKLYHCALQMTSHDGVWTS 320 (371)
T ss_dssp SCSSCEEEESTHHHHHHCSSCCCCCSCEEEEEEECGGGCCSCEEEEEEEECCCCCCTTSCCCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEE
T ss_conf 98440303532058882476577334188876225233467406788750666667668898644899998743673013
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~~s~QCP~~~~~G~~q~VL~~~~~pt~~~~iVGvsi~~eGQq~Ri~Y~Gdh 371 (371)
T d1mkfa_ 321 TSSEQCPIRLVEGQSQNVLQVRVAPTSMPNLVGVSLMLEGQQYRLEYFGDH 371 (371)
T ss_dssp CCCSSCCEEEEECSSTTEEEEEECGGGGGGEEEEEEEETTEEEEEESSCCC
T ss_pred EECCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCC
T ss_conf 313557556730676068999982466764056999974700021012589
|
| >d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27967.62 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 MnsfG~~lr~ttfGESHG~alg~vidG~PaG~~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtGsPI~ 80 (371)
T d1r53a_ 1 MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRPGQSKLSTPRDEKDRVEIQSGTEFGKTLGTPIA 80 (371)
T ss_dssp CCEECSSSEEEEECCTTSSEEEEEEECCCTTCBCCGGGTHHHHHTTCC------------CCCEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEE
T ss_conf 98776534898415478884489980508588838999999996459999998866899984899243208978455207
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~kyg~~d~~gggrsSaReTa~rvaaGaia~~~L~~~~gI~v~s~V~~IG~ 160 (371)
T d1r53a_ 81 MMIKNEDQRPHDYSDMDKFPRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE 160 (371)
T ss_dssp EEEEC-----------------------------------------CCCHHHHHHHHHHHHHHHHTTCCEEEEEEEEETT
T ss_pred EEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC
T ss_conf 88814532310010133324668741776764486533565415688899999999999999998489799999998611
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~~~~~~~d~~~~~~~~~~~~~~~~~~~~vrc~D~~~~~~m~~~I~~ak~~gDSlGGivev~~~gvP~GLG~p~fdkLda 240 (371)
T d1r53a_ 161 IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPCFDKLEA 240 (371)
T ss_dssp EECCCCTTCHHHHHHHHHCCHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEEEESCCTTCSBTTTBCHHH
T ss_pred EECCCCCCCHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH
T ss_conf 77154345612332214465655553196107886888999999999972599755089999970589877720044145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~LA~A~mSIpAVKgVEfG~GF~~a~~~GSe~nD~~~~~~~~g~~~~~tN~aGGi~GGiSnG~pi~~rva~KP~sSi~~~q 320 (371)
T d1r53a_ 241 MLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQ 320 (371)
T ss_dssp HHHHHHHTSTTBCCCEETTTTGGGGSCHHHHHCSBC--------CBCCCCSCSEETTEECSSCEEEEEEECCC-------
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 88887742410025650456117645562247762205788864245688777546764896069999857810046877
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~Tvd~~~~~~~~~~~gRhDpc~vpra~pV~Eam~alvlad~~L~~~~~d~~ 371 (371)
T d1r53a_ 321 KTATYDGEEGILAAKGRHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS 371 (371)
T ss_dssp ----------------CCCSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 547757978776106988981726548999999999999999998516789
|
| >d1to6a_ c.141.1.1 (A:) Glycerate kinase GlxK {Neisseria meningitidis, (serogroup A) [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerate kinase I superfamily: Glycerate kinase I family: Glycerate kinase I domain: Glycerate kinase GlxK species: Neisseria meningitidis, (serogroup A) [TaxId: 487]
Probab=100.00 E-value=0 Score=27966.79 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 MkiliApDsFKgslsA~ea~~ai~~g~~~~~p~~~~~~~P~aDGGEGt~dal~~~~~g~~~~~~v~gplg~~v~a~~~~~ 80 (371)
T d1to6a_ 1 MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDGGEGTVDAIRHSLDLEEKCLQVTGSFGQKEVMRYFQK 80 (371)
T ss_dssp CEEEECCCCBTTTBCHHHHHHHHHHHHHHHCTTCEEEECCCCSSSTTHHHHHHTTSCCEEEEEEEECTTSSEEEEEEEES
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECC
T ss_conf 90999943888862899999999999998599988999730648543999999863997999999899998157899637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~tAvIE~A~asGL~l~~~~~r~p~~~tT~G~GelI~~Al~~G~~~iilglGGSAT~DgG~G~L~ALG~~f~D~~g~~l~ 160 (371)
T d1to6a_ 81 EQLALFEVADLVGLGKIPLEKRNPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP 160 (371)
T ss_dssp SSEEEEETHHHHBGGGSCTTSCCTTSCCCHHHHHHHHHHHHTTCCEEEEEECSBCCCSTTHHHHHTTTCEEECTTSCBCC
T ss_pred CCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCC
T ss_conf 87543016663676303887777112246119999999997699769997158636616789999614536888999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~g~~L~~i~~id~~~~~~~l~~v~~~ia~DV~npL~G~~GAa~vfgpQKGa~~~~v~~le~~l~~~a~~~~~~~~~~~g 240 (371)
T d1to6a_ 161 ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFEVVDQAIQDFYEKVSPATLKLKG 240 (371)
T ss_dssp SSGGGGGTCCEEECSSCCCCCTTCEEEEEESCCCCSSSTTSHHHHHSGGGTCCGGGHHHHHHHHHHHHHHHCGGGGGCTT
T ss_pred CCCHHHHHHHCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC
T ss_conf 86153675002662368711342849999556765547878645650445887899999999999999984311015678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~gaAGG~~~~l~~~l~a~~~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~QSl~GK~p~~va~~ak~~~pviai~G~v~ 320 (371)
T d1to6a_ 241 AGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLV 320 (371)
T ss_dssp TTTTTTHHHHHHHHSCCEEEEHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEEESEEC
T ss_pred CCCHHHHHHHHHHHHCCEECCCHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 63102578999999588846509999988599978356998997887552321265767999999767998899977557
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~Gi~~~~si~~~~~~l~~a~~~a~~~L~~~a~~i~r~l~~~~~ 371 (371)
T d1to6a_ 321 EDLPSLPFENIQAAFSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI 371 (371)
T ss_dssp TTCCCSSBTTEEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 886678754962999758899999999998999999999999999842379
|
| >d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: HybD-like family: Germination protease domain: Germination protease species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=0 Score=27965.47 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~~~~l~~y~iRTDLAlEa~E~~~e~~~~~~~~~ei~GV~~~e~~~~~ikiT~V~I~e~Ga~~mgKp~G~YiTiEap~l 80 (371)
T d1c8ba_ 1 MEKELDLSQYSVRTDLAVEAKDIALENQPKPNNQSEIKGVIVKEKEEQGVKISMVEITEEGAEAIGKKKGRYVTLESVGI 80 (371)
T ss_dssp CCCCCCCCCCCCCCCCTTHHHHHHHHHCCC---------CCCSEEEEEEEETTEEEEEEEECHHHHTTTTSCCEEEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCHHHHHHCCCCCCEEEEECCCC
T ss_conf 98655521143537878988998865320113467668769888862986899999782689985899851799846877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~D~~~~~e~~~~v~a~~l~~l~~~~~~~~~~~vLVVGLGN~~VTPDALGP~vv~~l~VTRHL~~~~p~~~~~g~r~Vs 160 (371)
T d1c8ba_ 81 REQDTEKQEEAMEEVFAKELNFFIKSLNIPDDASCLVVGLGNLSVTPDALGPKAVDNLLITRHLFELQPESVQDGFRPVS 160 (371)
T ss_dssp CCCSSSSSSHHHHHHHHHHHHHHHHHTTCCTTCCEEEEECSCSSSGGGCHHHHHHTTCCCCHHHHHHSCCSSCSSCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHEECCEEEEHHHHHHCCHHHCCCCCEEE
T ss_conf 75678899999999999999999863178988817999688877786563701113363343045547254507871256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 aIaPGVmg~TGiET~EIIkgiVek~kPD~VIaIDALAaRs~~Rln~TIQIsDTGI~PGSGVGN~R~~l~~etLGVPVIAI 240 (371)
T d1c8ba_ 161 AIVPGVMGMTGIETSDIIFGVVKKVNPDFIIAIDALAARSIERVNATIQISDSGIHPGSGVGNKRKEISYETLGIPVIAI 240 (371)
T ss_dssp EECSGGGCCCSSCHHHHHHHHHHHHCCSEEEEEEEECCSSGGGSSSEEEEETTCBCSCSSSSCCCCBSSSCCC-------
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
T ss_conf 88587550344249999999987518989999601013752333564786677858887767555637987829988997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 GVPTVVdAatI~~Dtid~~~~~~~~~~~e~~~~s~~l~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ek~~Li 320 (371)
T d1c8ba_ 241 GIPTVVDAVSITSDTIDFILKHFGREMKEQGKPSKSLLPSGMTFGEKKKLTEDDLPNEEQRQTYLGMIGTLPDEEKRRLI 320 (371)
T ss_dssp --CCCEEEEEEECCEESCCCHHHHTTTTTCC---------------------------------CCCCSSCCCTTHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 68806601998789999999987543201346531113332333422222222343112204688776246889999999
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~EvL~P~~~~l~VTPKeID~~I~~~s~iIs~giN~ALhp~i~~e~~~~y~~ 371 (371)
T d1c8ba_ 321 HEVLAPLGHNLMVTPKEVDMFIEDMANVVAGGLNAALHHEVDQENFGAYTH 371 (371)
T ss_dssp HHHTCSSCTTEEEEETTHHHHHHHHHHHHHHHHGGGGSCCCCSCCCCSSCC
T ss_pred HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 997572479655675738999999999999898898677888778764339
|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=27964.65 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~rGL~gv~v~~T~Is~idg~~G~L~YRG~~i~dLa~~~sfEeVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 80 (371)
T d1aj8a_ 1 LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIM 80 (371)
T ss_dssp CCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99777998162686712768988799988769998646999999999977979899999999999997168988999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~p~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~a~~~~i~~~~~~~~~~~~~~~p~~~~~~a~~~l~~~ 160 (371)
T d1aj8a_ 81 EALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYML 160 (371)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHSTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 86114641267777776410110100124310146788899999999999999999837998879860056899987652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~g~~~~~~~~~~l~~~Lvl~aDHg~n~Stfa~r~vaSt~~d~~~a~~ag~~al~G~~hgga~~~~~~~~~~~~~~~~~~~ 240 (371)
T d1aj8a_ 161 HGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEE 240 (371)
T ss_dssp HSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 38878879999999999983677777620656654115775202888888871542011016799999985065420699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~v~~~l~~~~~i~GfGH~vy~~~DPRa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pNvd~~~~~l~~~lg~p 320 (371)
T d1aj8a_ 241 WFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIP 320 (371)
T ss_dssp HHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCC
T ss_pred HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 99998624776544472211466606889999887630003568999999999987421798838188999999983998
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~lf~~~R~~G~~AH~~Eq~~~~~l~RP~~~YvG~~~~~~~~i~~r~ 371 (371)
T d1aj8a_ 321 IELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHCC
T ss_conf 566669999999999999999998679973855401699899987767659
|
| >d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27964.31 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~d~y~~lr~~w~~~~~G~~~~~~~d~~~~~~~~~l~~~a~~~~~~~~~~~~~~~lw~dl~~~~~~~~~~~~~~rL~~mA 80 (371)
T d1n7oa1 1 VKDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMA 80 (371)
T ss_dssp CCSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHSCCSSSCSSSCGGGCCTTSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96489999999999863745677687899999999999999999872135677777789987775147999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ay~~pgs~lY~d~~l~~~I~~al~~l~~~~y~~~~~~~gNWw~~~Ig~P~~l~~~lill~~~l~~~~~~~~~~~i~~~~ 160 (371)
T d1n7oa1 81 KQVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFV 160 (371)
T ss_dssp HHHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99859998553699999999999999997089888888898303640758999999988311169999999999999867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG 240 (371)
T d1n7oa1 161 PDPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYG 240 (371)
T ss_dssp CCTTEECTTSSSCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGGSCCSSSSEECTTSCEEETTTEECTTTHH
T ss_pred CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEECCCCEECCCCEECCCCCH
T ss_conf 88212035677866064116999899999999986799999999999887741102688440377601257622167513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~G~~~d~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~ 320 (371)
T d1n7oa1 241 NVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMS 320 (371)
T ss_dssp HHHHHHHHHHHHHHTTSSSCCCHHHHTHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799888897899999999995433010555015557886225788666414899999999985149
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~iK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~i~~~p~ 371 (371)
T d1n7oa1 321 EGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPR 371 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSCGGGGCCSHHHHHHHHHHHHCTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999966875452225345789999999865898898998
|
| >d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus agalactiae [TaxId: 1311]
Probab=100.00 E-value=0 Score=27963.25 Aligned_cols=1 Identities=100% Similarity=0.170 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~d~y~~l~~~w~~~~~G~~~~d~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~lw~dl~~~~~s~~~~~~~~rL~~mA~ 80 (371)
T d1f1sa1 1 EDNFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAKNIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAK 80 (371)
T ss_dssp CSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSCGGGCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 97699999999998638766786677899999999999999998612676656667899977752589999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 aY~~pgs~ly~d~~l~~~I~~aL~~l~~~~y~~~~~~~~~~NWW~~eIg~P~~l~~~lill~d~l~~~~~~~~~~~i~~~ 160 (371)
T d1f1sa1 81 QITNPHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTDAEIKTYTDPIEHF 160 (371)
T ss_dssp HHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCTTSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 98499985547999999999999999983899876688989861123175799999998720015999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSfiqH~~v~Y~G~Y 240 (371)
T d1f1sa1 161 VPDAEYFRKTLVNPFKALGGNLVDMGRVKIIEGLLRKDNTIIEKTSHSLKNLFTTATKAEGFYADGSYIDHTNVAYTGAY 240 (371)
T ss_dssp CCCTTEESTTSSCCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCCBSSSSEEBTTSCEEETTTEECTTTH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHCCCCEECCCCC
T ss_conf 78813322567886636522699999999999998289999999999876561103578723047661004670006762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 G~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~g~~~~~v~GR~IsR~~~~~~~~g~~~~~~~~~l~~~ 320 (371)
T d1f1sa1 241 GNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISREAASSHAAAVEVLRGFLRLANM 320 (371)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 39999999999999767988888789999999999700456357643565677622478876632799999999987334
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~vK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~I~~~p 371 (371)
T d1f1sa1 321 SNEERNLDLKSTIKTIITSNKFYNVFNNLKSYSDIANMNKLLNDSTVATKP 371 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHCCSSCGGGGCCSHHHHHHHHHHHHCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 989999999999999984587644100645599999999985578888898
|
| >d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Trichoderma reesei, Endoglucanase I [TaxId: 51453]
Probab=100.00 E-value=0 Score=27959.85 Aligned_cols=1 Identities=100% Similarity=1.035 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 QQ~Gt~t~E~HP~ltwq~CT~~ggCt~~~g~vV~Danwrw~H~~~~~~c~~gn~~~~~lCpd~~tCa~nC~ldgaDY~~~ 80 (371)
T d1eg1a_ 1 EQPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDANYNSCTVNGGVNTTLCPDEATCGKNCFIEGVDYAAS 80 (371)
T ss_dssp CEECSSSCCCCCBCCEEEEETTTEEEEECCEEEECGGGSCEECTTCCBSEETTEECTTTCSSSHHHHHHCEECCCCTTTT
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887767548851447515899827723569980573202006986543388655234887566776246557763675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 GVttsG~sltL~~~~~~~~~~~~~vGsRvYLl~~d~~Yqmf~Llg~EftFdVD~S~lpCGlNgALYfveM~adGg~s~~n 160 (371)
T d1eg1a_ 81 GVTTSGSSLTMNQYMPSSSGGYSSVSPRLYLLDSDGEYVMLKLNGQELSFDVDLSALPCGENGSLYLSQMDENGGANQYN 160 (371)
T ss_dssp TEEECSSEEEEESCEECSSSSEECCCCEEEEECTTSSBCCBCCTTSEEEEEECTTSCCTTEEEEEEEECCCTTTTCCSSC
T ss_pred CEEECCCCEEEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 26951884789999824766532023327997588837888726971688864478875223366665226568966667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~aGA~YGtGYCDAQCp~~~w~~g~~~~g~~G~CC~EmDIwEANs~A~a~TpH~C~~~~CD~~GC~~NpYR~g~~~fyG~G 240 (371)
T d1eg1a_ 161 TAGANYGSGYCDAQCPVQTWRNGTLNTSHQGFCCNEMDILEGNSRANALTPHSCTATACDSAGCGFNPYGSGYKSYYGPG 240 (371)
T ss_dssp CCGGGGTCCCCCTTCCBCSEETTEECTTCCBCCCCEEEEEEECSSCBCBEEECBCSSCBCSSCCCBCTTTTTCTTTSSTT
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66663675323166873332136677578753035401015454134202434568741888867774555786211489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~tVDT~k~fTVVTQF~t~~~t~~G~LtEIrR~YVQ~GkvI~n~~~~~~~~~~~~~~~~~ggl~~mg~al~rGmVLv~SlW 320 (371)
T d1eg1a_ 241 DTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQNGVDIPSAQPGGDTISSCPSASAYGGLATMGKALSSGMVLVFSIW 320 (371)
T ss_dssp SSSCTTSCEEEEEEEEETTSSTTSCEEEEEEEEEETTEECCCSSTTCEEECCCSGGGGGTTTHHHHHHHHHCBEEEEEEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEE
T ss_conf 63026897389988665898664434477579997998902776566644454442336889999888608869999979
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 dd~~~~M~WLDs~~~GpC~~~~g~p~~ve~~~p~a~V~~SNIKfG~I~ST~ 371 (371)
T d1eg1a_ 321 NDNSQYMNWLDSGNAGPCSSTEGNPSNILANNPNTHVVFSNIRWGDIGSTT 371 (371)
T ss_dssp ECTTTTTHHHHBGGGCSBCTTTTCHHHHHHHCTTCEEEEEEEEEESTTTCC
T ss_pred ECCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCC
T ss_conf 279998523058988888888898668623289977998727583787889
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=100.00 E-value=0 Score=27957.17 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~p~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G~~n~~~aD~~v~~a~~n 80 (371)
T d1r85a_ 1 KPHISALNAPQLDQRYKNEFTIGAAVEPYQLQNEKDVQMLKRHFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKAN 80 (371)
T ss_dssp CCCCBGGGSCCHHHHHTTTCEEEEEECGGGGGCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99664255664999860578387843755547988999999866900326467634124779925838899999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 gi~vrGH~LvW~~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g~I~~WDVvNE~~~~~~~~r 160 (371)
T d1r85a_ 81 GMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDDIKYWDVVNEVVGDDGKLR 160 (371)
T ss_dssp TCEEEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEESCBCTTSSBC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 99787767786233354101256666444445422333699999999999999999974897528998731106998733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~~~~~i~ 240 (371)
T d1r85a_ 161 NSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIE 240 (371)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf 37522115858999999999986687546665145644440258999999999977997441433412367998889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~~a~~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D~~sW~~~~ 320 (371)
T d1r85a_ 241 KTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDSR 320 (371)
T ss_dssp HHHHHHHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTTSCGGGGG
T ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99999997399237866674167776445766542328999999999999999999638974599986898797446788
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLlfD~~~~pKpAy~ai~d~~ 371 (371)
T d1r85a_ 321 ADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAIIDHK 371 (371)
T ss_dssp CCEEECTTSCEECCTTSCCSEEETTCSCCCCSSBCTTSBBCHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 865435545533222222222235677788734689988977999986349
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27955.18 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp CEEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEE
T ss_conf 95789998838999989999999994889899998889978999995588998889999799999999979993999862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s 160 (371)
T d1k8kc_ 81 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160 (371)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 03321100122322110001111111211000002576302544203343311100101112221111111111100013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 161 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEE
T ss_conf 47679998401576431001221111111101124404766747898751233210000147860588641012100000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (371)
T d1k8kc_ 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 320 (371)
T ss_dssp CSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEE
T ss_conf 14665203654699979999819926787760898628872020676542124622001685065205871245566141
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~~~~~~l~~~ 371 (371)
T d1k8kc_ 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 371 (371)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHHCTTCCCC
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCEECC
T ss_conf 255569889999948998656799999189939999698684653587639
|
| >d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Spore coat polysaccharide biosynthesis protein C species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27963.12 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~~~~~~p~~~~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~ 80 (371)
T d2fnua1 1 KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP 80 (371)
T ss_dssp CCEESCCCCCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred CEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 92067899899999999999981898668977999999999997829399982689999999999544579977052013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga 160 (371)
T d2fnua1 81 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGS 160 (371)
T ss_dssp SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC
T ss_conf 44332200022058632123332223221012333046200001123445653334532121102220011314441586
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~ 240 (371)
T d2fnua1 161 EYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS 240 (371)
T ss_dssp EETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 01030478643222335566534320154578762122200000012101122322222311256510033145555544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~ 320 (371)
T d2fnua1 241 QLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQ 320 (371)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGG
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCC
T ss_conf 43211210334443310001212223333332233333333333322222221067999999999879984144765112
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------9
Q 003615 112 --------------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~ 371 (371)
T d2fnua1 321 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 371 (371)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 898884266689989999984959896888889999999999999999748
|
| >d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Peptidylarginine deiminase Pad4, catalytic C-terminal domain domain: Peptidylarginine deiminase Pad4, catalytic C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27888.99 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 APwimtpnt~~p~eV~v~~~~~n~~Fi~~v~~l~~~a~~~l~i~~~~~~~~DrW~QDe~E~GY~qaP~~~~pVvldspR~ 80 (370)
T d2dexx3 1 APWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRN 80 (370)
T ss_dssp CCCBCCCTTSCEEEEEECCCSSCHHHHHHHHHHHHHTTCEEEECCHHHHTTCCCTTTSEEEEEEEETTEEEEEEEECTTC
T ss_pred CCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCC
T ss_conf 98574689998648999861268999999999999729956746524578980300021130342689974558607220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~gl~~fp~~~llg~dfG~~tr~~~~~~v~~lDSfGNLEvsPPvt~~Gk~YPlGRIliG~s~~~~~~gr~m~~~v~dFL~A 160 (370)
T d2dexx3 81 RGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSA 160 (370)
T ss_dssp SGGGGHHHHTTSBTTBEEEECSCSSSCCCGGGSGGGEEECCCEEETTEEETTCCEEEEECSSCCTTCCCCCHHHHHHHHH
T ss_pred CCCHHCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 33011527774178753387348877642023567734479862588426777488547788876545330899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Q~VQ~Pv~L~sdWL~VGHVDEf~~FvPa~~~kgfrlLlAsP~a~~~Ll~~~q~~GhG~a~~f~g~~~~~~~tI~~iL~d~ 240 (370)
T d2dexx3 161 QQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNK 240 (370)
T ss_dssp SGGGCCEEEECTTBSSCCGGGTEEEEECSSGGGEEEEEEEHHHHHHHHHHHHHTTCTTCEETTTCTTSCCEEHHHHHHCH
T ss_pred HCCCCCCEECCCHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHCCH
T ss_conf 64599802305201057401017876369998538996388999999999987578646504655444221199986387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~l~~~N~~~q~~Id~nr~iLKrELGLte~DIIdiP~LF~~~~~~~A~a~fP~mVNmlVlg~~L~iPkPfGP~inG~c~le 320 (370)
T d2dexx3 241 TLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLE 320 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECCEEECGGGCEEESSCCTTSCEEETTEEEEECCCCCEETTEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHH
T ss_conf 78999999998631789999987099867731253440545878621237641666874033067899788488630799
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
=
T Consensus 321 e~v~~lleplGl~c~FiDD~~sYh~~~GeVHcgTNv~R~pf~~kWW~~~p 370 (370)
T d2dexx3 321 EKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFSFKWWNMVP 370 (370)
T ss_dssp HHHHHHHGGGTCEEEEECCTTTTGGGTCCTTTTEEEEECCCSSCGGGCCC
T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999745478758995473788861772540464441788866702689
|
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=27884.88 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~p~~~eii~~le~~~P~~lAe~wDnvGL~vg~~~~~V~~I~valD~t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~ 80 (370)
T d2gx8a1 1 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 80 (370)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred CCCHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 99789999999986999671567987379689977649899997699999999997799999979987768964466788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~li~~~I~vys~HTnlD~~~~G~nd~La~~Lgl~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~agag~ 160 (370)
T d2gx8a1 81 AYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGH 160 (370)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHCCCEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCHHCCCCC
T ss_conf 05699999997897699932402105775799999984897533335555555542389817256666653000037875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ig~y~~~~~~~~g~G~~~~~~~~~P~ig~~~~~~~~~e~~~e~~~~~~~~~~v~~al~~ahpy~~~~~~~~~~~~~~~~~ 240 (370)
T d2gx8a1 161 IGNYSHCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETL 240 (370)
T ss_dssp BTTEEEEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 45632131013676541477788875676785664131430220427778889998887288610133421234655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 G~Grig~l~~p~~l~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GSG~s~i~~a~~~gaDv~ITGe~k~h~~~dA~~ 320 (370)
T d2gx8a1 241 GLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMM 320 (370)
T ss_dssp EEEEEEEEEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf 76459993786039999999998719982899588887423799973662789999987799899982886799999997
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~gi~lId~GH~sE~~~~~~l~~~L~~~~~~~~~~i~v~~S~~~~dP~~~i 370 (370)
T d2gx8a1 321 LGLNIVDPGHNVEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV 370 (370)
T ss_dssp HTCEEEECCGGGGGHHHHHHHHHHHHHHHHTTCCCEEEECCCCCCCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEC
T ss_conf 69979978832628999999999999750048856999954778976449
|
| >d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27884.41 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~l~d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D 80 (370)
T d2hgsa4 1 TNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQN 80 (370)
T ss_dssp CCSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99876588889999999999999997483654688888878345578685577687899999999999999999999737
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~fL~~~l~~~~~~D~Ft~~L~~i~~~v~~~g~~q~l~Lgl~RSDYMl~~~~~~~~~~KQVE~NTIS~sfggls~~v~~l 160 (370)
T d2hgsa4 81 AAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAV 160 (370)
T ss_dssp HHHHHHHHHTHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECSSSCEEEEEEEEECSSCCCHHHHHHSHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCCCEEEEEECEEEEECCHHHHHHHHH
T ss_conf 99999999877414799999999999999617866259988200654167777665424786112330002176648999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Hr~l~~~~~~~~~~~~~p~n~~~~~la~gla~a~~~y~~~KKvQQ~La~pgvLe~Fl~~~~~~~~~lr~tFa~ly~LD~~ 240 (370)
T d2hgsa4 161 HRHVLSVLSKTKEAGKILSNNPSKGLALGIAKAWELYGSTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVG 240 (370)
T ss_dssp HHHHHHHTTCHHHHTTSCCCCHHHHHHHHHHHHHHHHCCSHHHHHHTTSTTHHHHHSTTCHHHHHHHHHTCCCEEECSSS
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999862555421348899717999999999999974466778987498779987089889999999962314506887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~g~~a~~~a~~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~~e~~ayILMerI~P~~~~~~~vr~g~~~~~~~~iS 320 (370)
T d2hgsa4 241 EEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVVQCIS 320 (370)
T ss_dssp HHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTTSGGGGGEEEEECCCCCCEEEEEECTTSCCEEEEEEE
T ss_pred CCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCC
T ss_conf 45269999767390227755632477651015488999997688676667899974378776865898896022056132
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpylv 370 (370)
T d2hgsa4 321 ELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 370 (370)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred CCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCEECCEECCCCCCCC
T ss_conf 22243799957987997165107886278988887810254206686649
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=100.00 E-value=0 Score=27883.10 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~~~g~~ 80 (370)
T d2iida1 1 RNPLAECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWY 80 (370)
T ss_dssp CCTTGGGGCCTTHHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEE
T ss_pred CCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCE
T ss_conf 98557615881489999987647999999996999898889999999998789988999589988770678764877702
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~d~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iida1 81 ANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGK 160 (370)
T ss_dssp EESSCCCEETTCHHHHHHHHHTTCCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHH
T ss_pred ECCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32575563276489999999838763101025786279618852220233322455433320355543467777887877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (370)
T d2iida1 161 VVEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKL 240 (370)
T ss_dssp HHHHHHHSCHHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHHTTCCCEEEETTCTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88988742125666530100179999873255577887752100121001467776421001212566655404569999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~g~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~aD~VI~A~p~~~l~~i~~~p~l~~~~~~ai~~~~~~~ 320 (370)
T d2iida1 241 PTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVFTPY 320 (370)
T ss_dssp HHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCCTT
T ss_pred HHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 99999864876336864789888099189999964898179990078853898999607048999899999998337863
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~g~v~~aGd~~~~~~~~~~~a~~sG~~aA~~i~~a~~~ 370 (370)
T d2iida1 321 QFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 370 (370)
T ss_dssp HHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 10234504306668779963201378851099999999999999864249
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=27881.83 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~v~ipl~k~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs 80 (370)
T d3psga_ 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 98981510735889988728289998761146455305555576464033134687799999986898389999967989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (370)
T d3psga_ 81 NLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAP 160 (370)
T ss_dssp CEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEECCCC
T ss_conf 82897865787332566621787564423679718999578359999999778650101211389999603674021456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~ 240 (370)
T d3psga_ 161 FDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDS 240 (370)
T ss_dssp CSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHCCCCEEEEEECCCCEEEEEEEE
T ss_conf 66644545674345688763453554054442226888605888771386378583330341158864135537998724
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 i~v~g~~~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~ 320 (370)
T d3psga_ 241 ITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYIL 320 (370)
T ss_dssp EESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEE
T ss_pred EEECCEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEEE
T ss_conf 87299677048970179845886275789999999998587260389677744226778619999899999988599399
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a 370 (370)
T d3psga_ 321 QDDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ECSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECCCEEEEEEEECCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECC
T ss_conf 82992899999744589889719998896667999998999999899649
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=100.00 E-value=0 Score=27881.34 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d3coxa1 1 TLADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 80 (370)
T ss_dssp CCCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888899799978478999999999878793999967899887654533221113455443334544445544543456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vGG~S~~~~~~~~r~~~~df~~~~~~~~~~~~~~~~y~~~e~~lgv~~~~~~~ 160 (370)
T d3coxa1 81 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 160 (370)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67656535664445578862156420356555015865524897885223556873788999999999750876444776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~s~~~~~L~~a~~~g~~~i 240 (370)
T d3coxa1 161 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAAATGKLTI 240 (370)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSTTTTCSTTCCSSSBCCGGGTHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 66788860889999999974986334664345565655444345531224522364443436837877899985898489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~t~~~V~~I~~~~~~~~~V~v~~~~~~~~~~~~~~~~A~~VILaAGai~Tp~LLL~S~~~~~l~~~s~~vG~~~g~~~~~ 320 (370)
T d3coxa1 241 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMKAQGHLPNLSSQVGEGWGVLLNK 320 (370)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTSCTTTTCCBSSCTTT
T ss_pred EECCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
T ss_conf 73673899998499718999999588662322899989999995078885999996789897998877667885664575
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~g~~~~~~~~~~~d~~~~pg~~~~np~~t~~a~a~~~~~~~~~~~~ 370 (370)
T d3coxa1 321 ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 370 (370)
T ss_dssp TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 55666544687774576334366766768205379998878998875029
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27880.79 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d2iw1a1 1 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPA 80 (370)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 98999148899998999999999999977997999956787788886389986765544301158899999999986165
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iw1a1 81 DRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPER 160 (370)
T ss_dssp SEEEESSCCTTCSEEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGG
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCE
T ss_conf 52531036723789987622441046630474200040000067889999742157469982479999999860999642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~ 240 (370)
T d2iw1a1 161 FQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRK 240 (370)
T ss_dssp EEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHH
T ss_pred EEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 89997402222112467656666654304888663699998514554203332011123323322100000112222223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~ 320 (370)
T d2iw1a1 241 FEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEP 320 (370)
T ss_dssp HHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCC
T ss_conf 22222222222222223323344422233334443222234331133214577039993899718885279836998699
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~g~ 370 (370)
T d2iw1a1 321 FSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG 370 (370)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 99999999999997699999999999999999828547999999998485
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=0 Score=27880.32 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~ 80 (370)
T d1rh9a1 1 NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQM 80 (370)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHH
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99679989999999999999999526675011588999999999999998799199979856766765678887546788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~ 160 (370)
T d1rh9a1 81 FQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVA 160 (370)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986999999624443212687555410025777677521124899999999999999998641666765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (370)
T d1rh9a1 161 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQ 240 (370)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTST
T ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16870365300036666677543688999999999999965899749984221456544656777444565110235688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (370)
T d1rh9a1 241 GIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAK 320 (370)
T ss_dssp TCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 66088753246765567760245667788999999999757975998453676789988889999999999999999998
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 321 SGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp TTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 58980899982154788767799845866897228999999999986249
|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27880.91 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 p~p~~~~~i~vEf~SpN~~kplHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~G~Qi~~l~~~~~~~~~~~~~~~~~ 80 (370)
T d1iq0a2 1 PFPRRPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQAAETLFALRHYGLTWDGKEKY 80 (370)
T ss_dssp CCCCEEEEEEEECCCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTTSHHHHHHHHHHHHTTCCCCSSSCH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999986999863899998864311361799999999999769979899847976499999999999856153346544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~y~~~~~~~~~~~~~~~~~e~~~~le~~~~~~~~~~~l~~~~~~l~~l~v~fD~~~~Es~l~~~~~~~~~i~~l 160 (370)
T d1iq0a2 81 DHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALL 160 (370)
T ss_dssp HHHHHHHHHHHHHCTTTGGGHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHTTCCCSEEEEHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCHHHHHHHH
T ss_conf 56644324666542788888899999999987666999999999888865411331101012202322364146667666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~ga~~~d~~~~~~~~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~~~~~~~~~~~~~~i~i~~ 240 (370)
T d1iq0a2 161 EQSPHVFRPREGKYAGALVMDASPVIPGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSA 240 (370)
T ss_dssp TTSTTEECCSSSTTTTCEEEECTTTSCSCSCCEEEEECTTSCBCHHHHHHHHHHHHTTSSCCCEEEECCCSSCTTCEEEE
T ss_pred HHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEC
T ss_conf 52361441246665447983374355566674003685267725862079987601033222110024467663267632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~d~~~~~~~~d~~iyVvd~~Q~~h~~~v~~~~~~~g~~~~~~~~~hv~~g~v~~~g~kMStR~G~~v~l~dll~ea~~~a 320 (370)
T d1iq0a2 241 PEGEAYTPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLAVSVDEVLEEATRRA 320 (370)
T ss_dssp EEEEECCCCCSEEEEEEESSSCCCHHHHHHHHHHTTCHHHHTTEEEEEECCEEETTBCSCC----CCBHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
T ss_conf 43443202356788887124047999999999981998034111257899983378534356887458999999999999
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------9
Q 003615 112 -------------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~r~~~~~~~~~~a~~vgi~avky~~L~~~~~~~~~Fd~d~~lsfe 370 (370)
T d1iq0a2 321 RAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFE 370 (370)
T ss_dssp HHHHHHHCTTCSCHHHHHHHHHHHHHHHHHHHSCTTSCEEECHHHHHCSS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCEECHHHHCCCC
T ss_conf 99998508982008999987616632225864589998568789921479
|
| >d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Renal dipeptidase domain: Renal dipeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27810.98 Aligned_cols=1 Identities=0% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~e~A~~lh~~~pViD~H~D~~~~l~~~~~~~~~~~~~~~~~~~~ghvDlprlr~Ggv~~q~faifv~~~~~~~~~~~ 80 (369)
T d1itua_ 1 DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVR 80 (369)
T ss_dssp CHHHHHHHHHHTTSCEEEEEECHHHHHHHHHTTCTTSGGGCTTTCCSSSCCHHHHHHTTEEEEEEEECCCGGGTTTTHHH
T ss_pred CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 94789999996489989834328999998733333444344355888865799999669987999998078777759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~al~~id~~~~~~~~~~d~~~~~~s~~di~~a~~~gkiavil~iEg~~~l~~dl~~L~~~y~lGvR~i~Lt~n~~N~~a~ 160 (369)
T d1itua_ 81 RTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWAD 160 (369)
T ss_dssp HHHHHHHHHHHHHHHCTTTEEECCSHHHHHHHHHHTCEEEEEEEECGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999999999999688768973157899998743672788414345311256799999986495598722687887777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~g~~~~~~~GLt~~G~~~V~emn~lGmiiDlSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNl~De~l~aI 240 (369)
T d1itua_ 161 NWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp BGGGGGTSSCCSSSSBCHHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 75433577876678867678999998641481666487868899988612577456424026654033338998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~~GGviGi~~~~~fl~~~~~~~~~~~~~hi~~~~~l~G~dhVgiGsDfdg~~~~p~gl~~~~~~p~l~~~L~~rG~se~ 320 (369)
T d1itua_ 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEA 320 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHH
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 96597488850564212330236899999999999870952179865678999998777787788999999998699999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
.
T Consensus 321 ~i~ki~g~N~lRv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (369)
T d1itua_ 321 EVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS 369 (369)
T ss_dssp HHHHHHTHHHHHHHHHHHHHCCSSSCCCCCCCCGGGCCSSSCCCTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 9999998869999999999998613876789984572765441578899
|
| >d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitinase AC species: Arthrobacter aurescens [TaxId: 43663]
Probab=100.00 E-value=0 Score=27808.84 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~d~~~lr~rw~~~l~g~~~~~~~d~~~~~~l~~l~~~a~~~~~~~~~~~~~~~lW~dl~~~~sa~~~~~~~rl~~mA 80 (369)
T d1rwha1 1 PGAAEFAALRNRWVDQITGRNVIQAGDPDFAKAITALNNKAADSLAKLDAAAGRTSVFTDLSLAKDAEMVTTYTRLSQLA 80 (369)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCCCTTCHHHHHHHHHHHHHHHHHHHTBCCCTTCSCSBTTCCTTSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96679999999999997488766657878999999999999999997335677666688887886278999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Ay~~pgs~~y~d~~l~~~I~~al~~l~~~~~~~~~~~~gNWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (369)
T d1rwha1 81 TAWATPTAAVFGDAAVLAAIKAGLADANTLCYNDRKEEVGNWWSWEIGVPRALADAMVLLHAELSAAERTAYCAAIDHFV 160 (369)
T ss_dssp HHHTSTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99819999542699999999999999997188789999999101532858999999998502179899999999999866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 pdp~~~~~~~~~~~~~tGaNrvd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~vt~gdGf~~DgSf~qH~~~~Y~G~YG 240 (369)
T d1rwha1 161 PDPWLQFPPKRGKITSVGANRVDLCQGIIIRSLAGEDPTKLNHAVAGLSQVWQYVTSGDGIFRDGSFIQHSTTPYTGSYG 240 (369)
T ss_dssp SCTTEESCGGGCCEECCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHGGGGGSCBSSSSEEBTTSCEEETTTEECTTTHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCCH
T ss_conf 78643346667752252009999999999999980899999999998641122245897423477636304442166425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~m~~~v~GR~ISR~~~~~~~~g~~~~~~~~~la~~~ 320 (369)
T d1rwha1 241 VVLLTGLSKLFSLLGGTAFEVSDPTRSIFFDAVEGSFAPVMINGAMADAVRGRSISREANTGYDLGASAIEAILLLARAM 320 (369)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCGGGHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799898887899999999995003462577116667887100788776168999999999998519
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~vk~~i~~d~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 369 (369)
T d1rwha1 321 DPATAARWRGLCAGWIARDTYRPILNSASVPRTALVKQLEATGVAPVAE 369 (369)
T ss_dssp CHHHHHHHHHHHHHHHHTCCSSCTTTTCCHHHHHHHHHHHHHTCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999999998718765544676522689999986067783889
|
| >d2ewoa1 d.126.1.6 (A:2-370) Agmatine iminohydrolase {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=27808.49 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~tp~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~~~v~~~~~~~a~~~~~~~ 80 (369)
T d2ewoa1 1 AKRIKNTTPKQDGFRMPGEFEKQKQIWMLWPWRNDNWRLGAKPAQKAFLEVAEAISEFEPVSLCVPPLQYENALARVSEL 80 (369)
T ss_dssp CCEECSSCHHHHTCCCCCTTSCEEEEEECCCCCTTTSSGGGHHHHHHHHHHHHHHHTTSCEEEEECGGGHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 98567899301387878872416069998789986303578999999999999985898699998938999999998536
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~i~~~~~~~dD~W~RD~GP~~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~~lvlE 160 (369)
T d2ewoa1 81 GSHNIRIIEMTNDDAWIRDCGPTFLVNDKGDLRAVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLE 160 (369)
T ss_dssp TCCSEEEEECCCSSCCTTTSSCEEEECSSSCEEEEEEECCTTTTTTTCSSSCCTTHHHHHHHHHHTTTCCEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 77777999924797566134645898588988998533367765445545522457799999998736543466354875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 GG~ie~dG~GtlltT~~cll~~nRNp~~s~~~ie~~L~~~LGv~~viwL~~g~~~DdTdGHID~~arFi~~~tvl~~~~~ 240 (369)
T d2ewoa1 161 GGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTD 240 (369)
T ss_dssp GGGEEEETTTEEEEEHHHHTSTTSCTTSCHHHHHHHHHHHHCCSEEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCC
T ss_pred CCCEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 89789889985896445621667899989999999999985994799844766666667773206997289849997148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 d~~~~~y~~~~~~~~~L~~~~d~~G~~~~i~~lp~p~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (369)
T d2ewoa1 241 DKEHPFYQEAKAAYDFLSQQTDAKGRPLKVHKMCVTKEPCYLQEAATIDYVEGSIPREEGEMAIASYLNFLIVNGGIILP 320 (369)
T ss_dssp CTTSTTHHHHHHHHHHHHTCBCSSSCBCEECCBCBCSSCEECCCGGGSCCCCC-------CEECCBTTCCEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE
T ss_conf 87786579999999999987875699753885368975443333455444467664568988654236789999999990
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
-
T Consensus 321 ~yg~~~D~~Al~~l~~~fP~r~Vv~i~~~~l~~~gG~iHCiT~q~Pa~~ 369 (369)
T d2ewoa1 321 QYGDENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIHCITQQQPATL 369 (369)
T ss_dssp CCSCTTHHHHHHHHHHHSTTSEEEEECTHHHHTTSCCTTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCEECCCCCCCCC
T ss_conf 1798678999999998888997999844698864975247164536899
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=100.00 E-value=0 Score=27806.92 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~g~~P~~l~~~y~~~~~~tG~gvtVaIid~G~~~~~~~Dl~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 80 (369)
T d1ga6a_ 1 AGTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGDYSDDQQGQGEW 80 (369)
T ss_dssp CCBCCCBCGGGHHHHTTCTTSCCEEEEEEEEEEESBCHHHHHHHHHHHHHTTCCCCCEEEEECSCTTSCCCBCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEE
T ss_conf 98887749899999739998889887489999617865678899999986599989977651799888888887721133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ld~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~~G 160 (369)
T d1ga6a_ 81 DLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 160 (369)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 24500001015686499999957999865699999999999758986244244322457886168999999999999789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~s~~~ 240 (369)
T d1ga6a_ 161 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYE 240 (369)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 78998179876557678898766543434665688402333100135777765442021356787755335789866656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~P~~~~~~~~~~~~r~~pdv~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~vAGvvALi~~a~~~~~G~~n~~ly~~~~~ 320 (369)
T d1ga6a_ 241 SKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISS 320 (369)
T ss_dssp ECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEETTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEECCEECCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 67543334422578852201102467875048726854666578753113899999999863567668768899998864
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~di~~g~n~~~~~~~~a~~G~d~~tG~G~~d~~~l~~~~~s~~~ 369 (369)
T d1ga6a_ 321 TPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSNGF 369 (369)
T ss_dssp CGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCC
T ss_conf 7665204445888888887678678988956724379999999986699
|
| >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: HD domain domain: Hypothetical protein aq 1910 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=27806.50 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~k~~~D~i~g~i~~~~~~~rii~s~~fqRL~~~~Ql~~~~~v~p~a~htR~~HSLgV~~lar~l~~~l~~~~~~~v~~A 80 (369)
T d2heka1 1 MIKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLA 80 (369)
T ss_dssp CEEEEEETTTEEEEEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH
T ss_pred CCEEEECCCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 95377359988886488999982997670345773478552338999566211998999999999999743328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~LlHDiGh~PFsH~gE~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~d~ 160 (369)
T d2heka1 81 GLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGS 160 (369)
T ss_dssp HHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHHSHHHHHHHTTSCHHHHHHHHHHHHTCCSSHHHHHHHHHHHSTTCH
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
T ss_conf 99860265022204666620345520468998740179999998521236999999863246675204588775265101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Drldyl~rd~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~~~~~~~e~~~~~R~~m~~~vy~h~~~~~~~~~l~~~~~~~ 240 (369)
T d2heka1 161 DRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKL 240 (369)
T ss_dssp HHHHHHHHHHHHHTCCSSCCCCHHHHHTEEEETTEEEEEGGGHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 03433344465506767730199998877653400013563499999999999999899955478899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~d~~~~~~l~D~~i~~~L~~~~~~~~~~~~i~~R~l~K~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 320 (369)
T d2heka1 241 ISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEV 320 (369)
T ss_dssp TSSCCCSSTHHHHTCCHHHHHHHHHHCSTTHHHHHHHHSSCCCEEEEEESCHHHHHHHHHHHHHHSCGGGEEEEEEEECS
T ss_pred HHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 86589788999973369999999985802519999998340252020167788899999999987442144401343445
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~i~i~~~~~l~~l~~~S~lv~~L~~~~~~riy~~~~v~e~~~~~~~ 369 (369)
T d2heka1 321 YGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK 369 (369)
T ss_dssp CCSCCEEEETTEEEEHHHHCHHHHHCCCEEEEEEEECTTTHHHHHHTTC
T ss_pred CCCCEEEECCCCEEEHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHC
T ss_conf 6777489639855583563699998688666378889999999998629
|
| >d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27804.13 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~~eg~ltvW~~~~~~~~~~~~~~~~fe~~~gv~V~v~~~~~~~~kl~~~~~~g~~pDv~~~~~~~~~~~~~~g~l~~L~ 80 (369)
T d1laxa_ 1 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT 80 (369)
T ss_dssp CCCTTSEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCC
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCC
T ss_conf 98630899996798316999999999865219879999688799999999866999869998908899999879967588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~dG~~ygiP~~~~~~~~~ynkd~~~~~p~Tw~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (369)
T d1laxa_ 81 PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL 160 (369)
T ss_dssp CCHHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCCSSGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHCEECCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 44533455468898653489999897510220135775000112110057899876442037875632577764004899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (369)
T d1laxa_ 161 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV 240 (369)
T ss_dssp HHHTTCEEEEECSSCEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTSEEEEEECGGGHHHHHHHTC
T ss_pred HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
T ss_conf 98717720002355544454455778999999999998752764444552677765515775687416577540011245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
T d1laxa_ 241 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT 320 (369)
T ss_dssp CEEEECCCBBTTBCCCCEEEEEEEEEBTTCSCHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHH
T ss_conf 61376314555677655556435664057855899999999864899999999973898865133200444439489999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------9
Q 003615 112 ------------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~s~~eal~~~~~~it 369 (369)
T d1laxa_ 321 MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT 369 (369)
T ss_dssp HHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 9999608007888568999999999999998399999999999998519
|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=27736.40 Aligned_cols=1 Identities=100% Similarity=2.895 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~ 80 (368)
T d2ncda_ 1 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQS 80 (368)
T ss_dssp CCSSSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECC
T ss_conf 91589999999999999999999999999999999874899756997999990789901027898579957998699706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf 160 (368)
T d2ncda_ 81 IDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLF 160 (368)
T ss_dssp SCHHHHTTTCCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHH
T ss_conf 88655677686466778587999986214999998898775036513773115787560671366644344667999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~ 240 (368)
T d2ncda_ 161 DSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATA 240 (368)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 45443202455526899999886560201256421354311302666442334430220477788999999987511244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~t~~n~~ssrSh~i~~i~v~~~~~~~~~~~~s~l~~VDLAGse~~~~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPy 320 (368)
T d2ncda_ 241 STAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPY 320 (368)
T ss_dssp SSSCTTTTTTCEEEEEEEEEEECTTSCCEEEEEEEEEECCCCCCC----------CTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 22146545554327899999976698856765444422010233102321024552026499999999998658998997
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
|
T Consensus 321 R~SkLT~lL~dsLggns~t~mI~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 321 RNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp GGSHHHHHHGGGSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998985599870999999798735499999999999997569
|
| >d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=27731.53 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~k~ltfdDVlLvP~~sti~srdVdls~~~~~~~~l~iPIiss~MDtV~~~~mA~~la~~Gglgvlhr~~~~ 80 (368)
T d2cu0a1 1 KFVEKLEKAIKGYTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGI 80 (368)
T ss_dssp CHHHHHHTCCCCCCGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCH
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCH
T ss_conf 96788998876288000898589776766563653796188314889895798776888999999978996575064898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 e~~~~~v~~v~~~e~~~~~~~d~~~~~~v~~~~~~~~~~r~~~l~~aGvd~ivID~A~Gh~~~~i~~lK~ir~~~~~~vI 160 (368)
T d2cu0a1 81 EEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFI 160 (368)
T ss_dssp HHHHHHHHHHHTCCCCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999887433444324101366763799932572778999999983998798437542012456666554121043132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 aGNVaT~e~~~~l~gaD~VkVGIG~Gs~CTTr~~tGvG~Pq~sAi~e~~~~~~~~~~~iiADGGi~~~Gdi~KAla~GAd 240 (368)
T d2cu0a1 161 VGNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD 240 (368)
T ss_dssp EEEECCHHHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred ECCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEEECCC
T ss_conf 21136799997652276214445675555332112423434789999999875249706845887867721135664132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~VMlG~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~l~~l~ 320 (368)
T d2cu0a1 241 AVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLV 320 (368)
T ss_dssp EEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHH
T ss_pred EEECCCHHCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 35305311142235773671599270135676642211357752223555333444378832885078888899999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 gglrs~m~y~G~~~l~e~~~~~~f~~vt~a~~~E~~~h~~~~~~~~~~ 368 (368)
T d2cu0a1 321 GGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHPHDIIITNEAPN 368 (368)
T ss_dssp HHHHHHHHHTTCSBHHHHHHHCCEEECCHHHHHHHSCCSSCCSCCCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf 999999876286509998509789999954142467877366356899
|
| >d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamate-cysteine ligase family 2 (GCS2) domain: Carboxylate-amine ligase YbdK species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27730.78 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~f~~~~~~tiGvE~E~~lvd~~~~~~~~~~~~ll~~~~~~~~~~~i~~El~~~qiEl~t~p~~~~~e~~~~l~~~~~~ 80 (368)
T d1r8ga_ 1 LPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKV 80 (368)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEETTTTEECSCCHHHHTTTSSSCSSSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999983489876543679987667757999997222246886310467766998077779999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~~~~~~~~g~hv~~~~~d~~~~~~~~~~~~~~~p~l~ 160 (368)
T d1r8ga_ 81 VLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFI 160 (368)
T ss_dssp HHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSSHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99987655875244575212672215577508999998742707888764256031168999999999999999868998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 aL~anSP~~~G~~tg~~s~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vRp~~~~~~iEiR~~D 240 (368)
T d1r8ga_ 161 ALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMD 240 (368)
T ss_dssp HHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCCCCSSHHHHHHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEE
T ss_pred HHHCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 88528663358677886775267750876565430001120799999998556445677056316876466742124789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~p~~~~~~~~aa~~~~l~~~l~~~~~~~~~~~~~~~~~~n~~~aar~Gl~~~l~~~~~~~~~~~~~~~~~Ll~~~~~~l 320 (368)
T d1r8ga_ 241 TPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSA 320 (368)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 99988999997568887888998617877640448999999998876144411000689967689999999999999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 ~~lg~~~~l~~l~~~v~~g~t~A~~lr~~~~~~gsl~~~v~~~~e~~~ 368 (368)
T d1r8ga_ 321 HKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWA 368 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 978898999999999982999999999999818999999999998739
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=27729.31 Aligned_cols=1 Identities=100% Similarity=1.367 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~g~a~~~~a~~~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~ 80 (368)
T d1mdah_ 1 EKSKVAGSAAAASAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFA 80 (368)
T ss_dssp CCCCCCSHHHHHHHTTCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCEECCCCCEEE
T ss_conf 94121200000123445679866645589876126972045788621799708998377888578777513989998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~ 160 (368)
T d1mdah_ 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160 (368)
T ss_dssp EEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE
T ss_pred EECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEE
T ss_conf 97556764010356786999989999383064378542102468864058878998999996899859999899893867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 240 (368)
T d1mdah_ 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240 (368)
T ss_dssp EEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCS
T ss_pred EEECCCCCEECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECC
T ss_conf 86046752374699823999948998899982689626665303111356664660101558689993489779996069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a 320 (368)
T d1mdah_ 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAII 320 (368)
T ss_dssp SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEE
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 93699760246543045540127883568871799879998358973340588649999899994868955899651799
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 ~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~~~~a 368 (368)
T d1mdah_ 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA 368 (368)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCCC
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCC
T ss_conf 998999899999489996999989999799998799998789973489
|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27729.22 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T d1f52a2 1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF 80 (368)
T ss_dssp TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 98879999999999997699870378854288999421035576777565577322456887666887787655577615
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpKP~ 160 (368)
T d1f52a2 81 PVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPM 160 (368)
T ss_dssp BCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSCSS
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 53001107889999999888622570564223456784322078786577889999999999999997436334741568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~GsG~HiH~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGll~~~~~~~al~~PtvNSYkRl~~~~~aP~~~~Wg~~NR~ 240 (368)
T d1f52a2 161 FGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRS 240 (368)
T ss_dssp TTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEESSCTT
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf 89877532589874159985656555556489999999999986699899977996077652477768743452367655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~iRi~~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~lP~sl~eAl~a 320 (368)
T d1f52a2 241 ASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAGSLEEALNA 320 (368)
T ss_dssp EEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHH
T ss_pred CCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHH
T ss_conf 31464025788662478447880177789999999976542421589999777872448976762320151379999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 l~~d~~~~~a~~~lGe~~v~~y~~~K~~E~~~~~~~vt~wE~~~Yl~~ 368 (368)
T d1f52a2 321 LDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV 368 (368)
T ss_dssp HHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 964978788765156999999999999999999679999999741689
|
| >d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Glutamine aminotransferase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27727.41 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~la~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~ 80 (368)
T d1v2da_ 1 MRLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPES 80 (368)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGG
T ss_pred CCCCHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 97782345467879999999864399889459889998899999999998602568899867899999997525557741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 160 (368)
T d1v2da_ 81 VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNT 160 (368)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEES
T ss_pred EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 26515307888777650444456532358850134567875177320001354345444788999975335765999769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~ 240 (368)
T d1v2da_ 161 PMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240 (368)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98866666999999999999998498265223333220333333222223344503641455323454322211144223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~~~~~~ 320 (368)
T d1v2da_ 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAF 320 (368)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHH
T ss_conf 32002221012332233333222222333221025788999999865322456876694786688306999968950899
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 ~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l 368 (368)
T d1v2da_ 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV 368 (368)
T ss_dssp HHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 999969999996233078999899899996499999999999999869
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27726.85 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 Tid~~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~ 80 (368)
T d1pyya4 1 TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMM 80 (368)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 93979999999999999997089569999999999939999967988854236766103443265517668863054699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~aaaLe~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vtl~~al~~S~N~~~~~l~~~lg~~~~~~~~~~~G~~~ 160 (368)
T d1pyya4 81 LAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGV 160 (368)
T ss_dssp HHHHHHTTCCCTTCEEECCCEEETTEEECCEETTTEECCSCEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99864023332222222101102444432345544334880456999997532454143210358244789998753487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~e~~g~~p~~~~~~~~~~~~G~~~~~tplq~a~aya~iANgG~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~i 240 (368)
T d1pyya4 161 PTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPV 240 (368)
T ss_dssp CCCCSCSSCCCCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEEGGGTEEEECCCCEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCC
T ss_conf 42245433233467643320000222346655107888867789854876205579888866876410134432344443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~m~~~v~~~~~~~~~~~gtg~~~~~~~g~~vaGKTGTaq~~~~~~~~~~~~~~~~~~~fvg~~P~~~P~~ 320 (368)
T d1pyya4 241 SKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDF 320 (368)
T ss_dssp CHHHHHHHHHHHHHHHHCTTTCTTEETTTTEESSCCTTSCCEEEEEEEECBCSSSSSBCCSTTCEEEEEEEEESSSSCSE
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCE
T ss_conf 27899999999987531145542676046531213799506678822201477788501366565699999957589959
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------9
Q 003615 112 -----------------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------------C 112 (807)
-
T Consensus 321 ai~V~v~~p~~~~g~~gg~vAapi~~~i~~~~~~l~~~~~~~~~~~~~ 368 (368)
T d1pyya4 321 ILYVTVQQPEHYSGIQLGEFANPILERASAMKDSLNLQTTAKALEQVS 368 (368)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTGGGCTTSCCSTTTTCC
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999778867887306899999999999997743589999724489
|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27654.82 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~GL~gv~~~eT~IS~id~~~G~L~YRG~~i~dLa~~~sFEEva~LL~~G~LPt~~el~~f~~~L~~~~~lp~~v~~~ 80 (367)
T d1o7xa_ 1 VVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDT 80 (367)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97977799837588680386898879998874999861599999999997798969999999999999863581999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~~~p~~~hpm~~l~~~vsal~~~d~~~~~~~~~~~~a~~l~A~~p~i~a~~~r~~~g~~~~~p~~~~s~~~~~~~~~~~ 160 (367)
T d1o7xa_ 81 IYLMPKEADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLLASFA 160 (367)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 98601230146788888998765300234321110167789989999999999876489877885034468887654048
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~l~~~lvl~adHg~n~Stfa~r~~aSt~~d~~~~~~aa~~~l~Gplhgga~~~~~~~l~~~~~~~~~~~~~ 240 (367)
T d1o7xa_ 161 REPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDPNRVQNWF 240 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSGGGHHHHH
T ss_pred CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 88506777776567400015788854300001451376422114667776045434673799999999633654237899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~pNvd~~~~~l~~~ 320 (367)
T d1o7xa_ 241 NDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYA 320 (367)
T ss_dssp HHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99986147754167875343566228999999999865046512699999999999998534589986838999999998
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
=
T Consensus 321 lG~p~~~~~~lf~~~R~~G~~AH~~Eq~~~~~~l~RP~~~Y~Gp~~~ 367 (367)
T d1o7xa_ 321 LGFPVYMFTALFALSRTLGWLAHIIEYVEEQHRLIRPRALYVGPEYQ 367 (367)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
T ss_conf 09786778899999999999999999985789841866510098999
|
| >d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27654.55 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~e~ah~~~~~~~~~~~~~~~~~~~~~~L~v~~~Gl~~~nPi~lAsG~~~~~~~i~~~~ 80 (367)
T d1d3ga_ 1 MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLY 80 (367)
T ss_dssp CCSCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHTTCCC---CCCCGGGCEEETTEEESSSEEECTTSSTTSSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHHH
T ss_conf 97770899999999999865898999999999998337553236898777568899866998676848787899999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~G~G~vv~kTit~~~~~gn~~pr~~~~~~~~~~~n~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~pv~vsi~~~~~~~ 160 (367)
T d1d3ga_ 81 KMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSV 160 (367)
T ss_dssp HHTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCS
T ss_pred HCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
T ss_conf 35874786134246632457760322102111211224767754699998888875411343436863899834654507
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~ad~lelNiScPn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~vKlsP~~~~~~i~~~a 240 (367)
T d1d3ga_ 161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp CHHHHHHHHHHHHGGGCSEEEEESCCTTSTTC----CHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88888877777765314400245000321122210111101257888887653202245776301247641000134467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~g~~gi~~~nt~~~~~~~~~~~~~~~~gg~sG~~~~~i~l~~v~~v~~~~~~~ipIig~GGI~s~~Da~e~i~aG 320 (367)
T d1d3ga_ 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC
T ss_conf 88876543102113332234454344211244321121110230889999999738995199988979999999999839
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
=
T Consensus 321 As~VQi~Ta~~~~Gp~ii~~I~~~L~~~l~~~G~~si~dl~G~a~~~ 367 (367)
T d1d3ga_ 321 ASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR 367 (367)
T ss_dssp CSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCSSHHHHTTGGGGC
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHCCC
T ss_conf 97887417788239079999999999999984999899962802269
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=100.00 E-value=0 Score=27653.41 Aligned_cols=1 Identities=0% Similarity=-0.329 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~i~~~~e~~~lp~~~~~~~~~~~~~y~~a~~~s~~~~a~e~~~~~~~~~~~~~~~~~~~p~~ 80 (367)
T d1iuqa_ 1 ASHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFV 80 (367)
T ss_dssp CCCCCGGGGCCSHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98641322266589999999999855789857999999999999999973489995089999999999888741478743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 f~~~h~~~~~~~~~~~~~~~~~~~li~~~~s~v~~~~~l~~~~Ekl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r 160 (367)
T d1iuqa_ 81 FSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAE 160 (367)
T ss_dssp CCSEECCCCSSSCHHHHHHHHHGGGBCGGGCEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHH
T ss_pred CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 67521000578778999999999986478777815789999999860799779987885400389999998512656210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~ 240 (367)
T d1iuqa_ 161 NTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240 (367)
T ss_dssp HCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTT
T ss_pred CEEEEEEHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf 33898545562257789999748878995465444563101002233268899999986168759999456764676666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~ 320 (367)
T d1iuqa_ 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHK 320 (367)
T ss_dssp TCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHCC
T ss_conf 66505665575505899999855799956856044133425887543320001036677861488679735666300022
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
-
T Consensus 321 ~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~~~~p~~~~~qp~ 367 (367)
T d1iuqa_ 321 NPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW 367 (367)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGGGCCSSCCEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 63889999999999999999999999985689822258888878999
|
| >d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: DmpA-like domain: L-aminopeptidase D-Ala-esterase/amidase DmpA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27653.32 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 r~r~R~lGi~~~~~pGp~N~ITDV~GV~VGH~T~~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~v~ag~~~~~g~~~~~ 80 (367)
T d1b65a_ 1 KPRARDLGLPFTGVTGPYNAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMT 80 (367)
T ss_dssp CCCGGGGTCCCCSCBCTTSSGGGSTTCEEEEEEEECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBC
T ss_pred CCCHHHCCCCCCCCCCCCCCEECCCCCEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 97567539887888799875014798566223644687654679986711799971899756786055561368876678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~v~e~g~~~~aIvLTggsa~Glaa~~~v~~~l~~~~~g~~~~~~~~vvPiV~~~~D~~l~d~~~~~~~~~~~~~A~~ 160 (367)
T d1b65a_ 81 GTHWIEDGGYFLGPVVITNTHGIGMAHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEADVRKALD 160 (367)
T ss_dssp SHHHHHHHCEECSCEEEEEGGGHHHHHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHHHHHHHH
T ss_pred CHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 05653547753677987567248888789999999856888777885210451279980677876678988999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~A~~~~v~~G~VGAGtGa~~~~~KGGiGtASr~~~~~~~~~tVGaLV~~N~g~~~~~~~~g~p~g~~l~~~~~~~~~~~~ 240 (367)
T d1b65a_ 161 NVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRDGTPQSQLQER 240 (367)
T ss_dssp TCBSSCCCCBSCGGGTTCEETTEECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCTTCHHHHC---
T ss_pred HHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 75228877887573211321356787521267887178835999999744788500240775200131445777777889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 nTtI~VVATDApL~~~ql~RlA~~A~~GlARai~p~ht~dGD~vfA~STg~~~~~~~~~~~~~~~~~l~~~~l~~lf~Aa 320 (367)
T d1b65a_ 241 GSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHRSAPFLDVEMVNDEPLDTVYLAA 320 (367)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCCCTTCEEEEEEEECCSCCCCGGGSCSEEEEEEECSGGGHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHH
T ss_conf 98899999598189999999999865315312677779984779994057867766556554441004720008899999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
.
T Consensus 321 aea~eeAI~nal~~A~t~~G~~~~~~~~~alp~d~~~~~~~~~~~l~ 367 (367)
T d1b65a_ 321 VDSVEEAVVNAMIAAEDMGGTPFDRLLVQAIDHERLRAVLRQYGRLA 367 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEECSTTCSCEECCCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCC
T ss_conf 99999999999974677657589987741799999999999846679
|
| >d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27651.71 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~Y~~~~~lR~~~Pv~~~~~~w~vt~~~di~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (367)
T d1ue8a_ 1 MYDWFKQMRKESPVYYDGKVWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELR 80 (367)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECCHHHHHHHHTCTTTEECCCSSTTTTHHHHHTTCCCCCCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 90899999856998844998998799999999669853537765567542224466432224555552006867875667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~f~~~~l~~~~i~~~~~~ll~~l~~~~d~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ue8a_ 81 NLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALRLGRADEIFSI 160 (367)
T ss_dssp HHHHGGGSGGGSCHHHHHHHHHHHHTTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSSSSSTTTCC
T ss_pred HCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 30133478665144999999999986303345316665543444210110464211026778888877620004799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~~~ 240 (367)
T d1ue8a_ 161 GRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREKGA 240 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999999999986423431012344441347777764133210010111222101023777633000111345556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~ai~E~lR~~p~~~~~~r~~~~~~~l~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~P~R~~~~~l~FG~G~r~C~G~ 320 (367)
T d1ue8a_ 241 LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPHLSFGSGIHLCLGA 320 (367)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECSSCEEEECHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCSTTSCTTH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 77877645205532334432344310221134048754433210035766689722018798999988779987188119
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
.
T Consensus 321 ~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~g~~~l~Vr~~r~ 367 (367)
T d1ue8a_ 321 PLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGYRKLVVRVERT 367 (367)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEECSCSSBCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 99999999999999985896634898534587758975236999979
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27650.89 Aligned_cols=1 Identities=100% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~i~~~i~g~f~E~lg~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~ 80 (367)
T d1qw9a2 1 EIDKRIYGSFIEHLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDL 80 (367)
T ss_dssp ECCGGGGEEECCSSTTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEET
T ss_pred CCCHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98824424406543573207664799998887665999999999639987865886136705212365986778886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~~~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~ 160 (367)
T d1qw9a2 81 AWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMD 160 (367)
T ss_dssp TTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSCCHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf 88876767777899999999809838999837974099999999997068988889999871887888732899635111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~g~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~~~~~iD~is~H~Y~~~~~~~~~~~ 240 (367)
T d1qw9a2 161 GPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGNRDNDTANY 240 (367)
T ss_dssp STTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHHGGGCSEEEEEEEECCTTCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 56555788999999999999998760299836999868877776555289999861311577022347778875512455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~~ 320 (367)
T d1qw9a2 241 LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITL 320 (367)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHHHHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 55677799999999999999874046778851886224564454555555554233755312237699999999999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
=
T Consensus 321 ~R~sD~V~mA~~A~lvNvl~~i~~~~~~~~~~~~~y~v~~~~s~~~r 367 (367)
T d1qw9a2 321 MKHADRVKIACLAQLVNVIAPIMTEKNGPAWKQTIYYPFMHASVYGR 367 (367)
T ss_dssp HHTTTTEEEEEEECSBSSSCSEEECTTSCEEECTTHHHHHHHHHHCC
T ss_pred HHCCCEEEEEEHHHHHHHHCCEEECCCCCEEECCCHHHHHHHHHHCC
T ss_conf 97259556540337664102148659998610751199999998529
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=100.00 E-value=0 Score=27651.58 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~v~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (367)
T d1n4wa1 1 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 80 (367)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95709996769899999999977959199991689988766565422222344544333334433543321235677766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~g~~lGG~S~i~~~~~~r~~~~~f~~~~~~~~~~~~l~pyy~~ae~~l~~~~~~~~~~~~~ 160 (367)
T d1n4wa1 81 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 160 (367)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 66566740223688652135776378873224360006866742232245738899999999998829877888866667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~k~s~~~~yl~~a~~~gn~~i~~~t 240 (367)
T d1n4wa1 161 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLH 240 (367)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSSBCCTTTTHHHHHHHTTSEEEEESE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC
T ss_conf 78728899999998738642235323224875555655567631246433445654467667623789758980998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~V~~I~~~~~g~~~v~v~~~~~~~~~~~~~~i~Ak~VVLaAGai~Tp~LLl~S~~~g~l~~~s~~lG~~~~~~l~~~~~~ 320 (367)
T d1n4wa1 241 QVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGCVLGKATDD 320 (367)
T ss_dssp EEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTCCTTTTCCBSSCTTTTBCT
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCC
T ss_conf 89998985899889999997777752049998648999906523079999847777999986676667865545644456
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
.
T Consensus 321 ~g~~~~~~~~~~~~g~~i~~~~~~~p~~t~~ala~~~~~~~~~~~~~ 367 (367)
T d1n4wa1 321 YGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 367 (367)
T ss_dssp TSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 66435877730347743568687893340799998799999885459
|
| >d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=100.00 E-value=0 Score=27648.87 Aligned_cols=1 Identities=0% Similarity=-0.093 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L 80 (367)
T d1ursa_ 1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV 80 (367)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf 97999827884579999999999999879989999848828999999999966999839998582789999987995400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ursa_ 81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYG 160 (367)
T ss_dssp CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCSSCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 24554411479778854638877876420354158887401023431008999999866303667777521068887541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~g~~~~~~~~~~~~~~~~ 240 (367)
T d1ursa_ 161 GYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGV 240 (367)
T ss_dssp CEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCSCCTTCCHHHHHHHHHTTCCSEEEECGGGHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 02211588644543135588889999999999986136564222037788888527741103366665444441156326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~P~~~~g~~~~~~~~~~~~~i~~~s~~~e~A~~fl~~l~s~e~q~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 320 (367)
T d1ursa_ 241 TPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVEQ 320 (367)
T ss_dssp ECCCCCTTSCCCCCEEEEEEEEEBTTCSCHHHHHHHHHHHTSHHHHHHHHHHHCCEESSHHHHTSHHHHTCHHHHHHHHH
T ss_pred EECCCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCHHHHHCHHHHHHHHH
T ss_conf 63365788664310005654010210131688999999850699999999971988873767739553209389999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------9
Q 003615 112 ----------------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~t~~~al~~~~~~i~kg 367 (367)
T d1ursa_ 321 LRYAVPMPNIPQMQAVWQAMSILQNIIAGKVSPEQGAKDFVQNIQKG 367 (367)
T ss_dssp GGGCEECCCSTHHHHHHHHTTHHHHHHHTSSCHHHHHHHHHHHHHC-
T ss_pred HHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
T ss_conf 95083178785489999999999999829899999999999998576
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27581.43 Aligned_cols=1 Identities=100% Similarity=0.604 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~ 80 (366)
T d1hz4a_ 1 EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQM 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 94430566213999999999999888999999999999854868996799999999999999879999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 160 (366)
T d1hz4a_ 81 ARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 160 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 87501148999999888788788888999998899999986750341256788899888789998145666689999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 240 (366)
T d1hz4a_ 161 EVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTA 240 (366)
T ss_dssp HHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 87663002468999988888887646678888999999999987311572699999999999986044898999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l 320 (366)
T d1hz4a_ 241 KPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 320 (366)
T ss_dssp CCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 76224666777889999999987587999999999999887642667479999999999999878999999999999997
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~e~e~~~a~~ll~~in 366 (366)
T d1hz4a_ 321 ANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREIN 366 (366)
T ss_dssp HHHHCCCHHHHTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 6531829999999999999999998659986999999999987559
|
| >d1moqa_ c.80.1.1 (A:) "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SIS domain superfamily: SIS domain family: double-SIS domain domain: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27577.09 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~m~kEI~eQP~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~I~~vG~GsS~~aa~~~~~~~~~~~~~~v 80 (366)
T d1moqa_ 1 GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPC 80 (366)
T ss_dssp CCCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999861788999889999999999876368620543103068887308889999822899999999999998439204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~sef~~~~~~~~~~~lvI~iSqSG~s~~ti~a~~~a~~~g~~~ti~iT~~~~S~la~~ad~~i~~~~g~E~~~~~T 160 (366)
T d1moqa_ 81 DVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVAST 160 (366)
T ss_dssp EEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCS
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99965445244345699987998620589635899999999749973899989999978986074632356654220000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 k~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~~g~A~E~ 240 (366)
T d1moqa_ 161 KAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEG 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 57899999999999986442032026778779999998876889987777899899997367526996577758999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 aLKl~E~~~~~a~~~~~~Ef~HGP~~~i~~~~~vi~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 320 (366)
T d1moqa_ 241 ALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHII 320 (366)
T ss_dssp HHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEE
T ss_pred HHHHHHHHHHEEEEECHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 99999887674785037776277430230796089846898177999999999997498299996687322445775699
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
=
T Consensus 321 ~~p~~~~~l~pl~~~ip~Qlla~~~A~~~G~~PD~Pr~L~K~vtve 366 (366)
T d1moqa_ 321 EMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 366 (366)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHHHHHHHTCCSSSCTTCCSCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
T ss_conf 6699756787999999999999999998198999999998785319
|
| >d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27575.31 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~y~~~~~lR~~~Pv~~~~~~w~vt~~~~v~~vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (366)
T d1io7a_ 1 MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELR 80 (366)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
T ss_conf 90899999835998873998999689999999659400336764555554433355432235555550117857888987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~f~~~~l~~~~~~i~~~a~~ll~~~~~~~~D~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (366)
T d1io7a_ 81 SMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVAFRLGKPGE 160 (366)
T ss_dssp GGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCTTSCCCTTC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 76145565130677888899999999873135563210000000122011001687345799999999999764030146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~l~ 240 (366)
T d1io7a_ 161 IFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLY 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 78888889887665420222045665542014589999999999999714420377999999874313322233442001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~ee~~r~~~~~~~~~R~~~~d~~i~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G~r~C~G~ 320 (366)
T d1io7a_ 241 LKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGA 320 (366)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCSCCCCTTCCGGGSCTTH
T ss_pred HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 00046553000234300010210024333436789777332010025611258665418898999988788986488369
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
-
T Consensus 321 ~lA~~e~~~~l~~ll~rf~~~~~~~~~~~~~~~~~~~~~lpVrl~~ 366 (366)
T d1io7a_ 321 PLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGYKRLVVRLKS 366 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEEECCCSSBCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9999999999999999779882089865787764787554799969
|
| >d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=27574.09 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~w~d~~r~i~v~aNi~~~~d~~~a~~~GAdGIGL~RtEflfl~~~~~p~~~e~i~~~~~~~~~~~l~ 80 (366)
T d1h6za1 1 RSPDLKGSFQTILQWCQEMKRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALD 80 (366)
T ss_dssp CCSCSTTHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTTHHHHHHHHHSCSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
T ss_conf 98987458999999875378669997089999999999759984503887998618987882898763235577999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 k~~~~~~~~y~~i~~a~~~~pV~iRtlD~g~dk~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~E~NP~LG~RGiR~~L~ 160 (366)
T d1h6za1 81 KLLPIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGIT 160 (366)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCEEEECCCSCGGGGCCSSCSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf 87788999999999970899879996224322357850555543111003543555532025557884123456655414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~p~lf~~QlrAilrA~~~~~~~g~~~~l~iMiP~v~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iG~MiEvPsaal~~ 240 (366)
T d1h6za1 161 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 240 (366)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
T ss_conf 80667999999999999987528865401221206679999989999989999887504876441367641213899869
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 d~~a~~vDF~SIGTNDLtQy~la~dR~n~~v~~~~~~~~~~~~~~p~~~~~~~av~~lI~~a~~~~r~~~~~i~vsiCGE 320 (366)
T d1h6za1 241 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 320 (366)
T ss_dssp HHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99863050899601046567765301551134567765200010556606699999999999998775189981997064
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
=
T Consensus 321 ~a~dp~~~~~Li~lGi~~lSvsp~~ip~vk~a~a~~~~~~~r~~~~ 366 (366)
T d1h6za1 321 HGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRAAMK 366 (366)
T ss_dssp GGGCHHHHHHHHHHTCSEEEECGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 0239999999998699979989277699999999854998787459
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=100.00 E-value=0 Score=27573.57 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 t~~lvd~~At~~t~~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~~~v~~~tG~yPAv~G~D~~~~~~~~~~~~~~ 80 (366)
T d2bvya2 1 TIAIVDADATAETRSLLSYLDGVRGEGILFGHQHTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAE 80 (366)
T ss_dssp CBCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTSCSSSCSCCSSCCHHHHHHSSCBSEEEEETTTTTTSSTTCCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 96665888799999999999985489879986146444666687426799999976888776443114567874433223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~ 160 (366)
T d2bvya2 81 NTRDENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGT 160 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 67311489999999976306997899971377888986557741689873689970689999999999999998750478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG 240 (366)
T d2bvya2 161 LIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG 240 (366)
T ss_dssp BCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEEC
T ss_pred CCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEE
T ss_conf 86089831220379855057889998999999999999999725876169986168778865211665288987478988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~l~~~~~~a~~~~Kp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~~~~~~~~y~~~W~n 320 (366)
T d2bvya2 241 LDTYDSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMETWAN 320 (366)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHSTTTTCCSEEEECCC
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 74457888752278999999999999873699579942002578644678742589999999873721001048988548
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~p~~g~~s~~dF~~~~~dp~~~f~~~l~~~y~~~~~~~~ 366 (366)
T d2bvya2 321 FDAGQHFVPVPGDALLEDFQAYAADPFTLFASEVTGAFDRTVAAAP 366 (366)
T ss_dssp CSSSSCSSCCTTCTTHHHHHHHHHSTTEEBGGGCCSTTCCCCCBCC
T ss_pred CCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCC
T ss_conf 9988761236997469999999759566542227032147666797
|
| >d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Heme-dependent catalase-like superfamily: Heme-dependent catalase-like family: Allene oxide synthase domain: Allene oxide synthase-lipoxygenase protein, N-terminal domain species: Black sea rod (Plexaura homomalla) [TaxId: 47982]
Probab=100.00 E-value=0 Score=27572.52 Aligned_cols=1 Identities=0% Similarity=-1.421 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~HakG~ga~G~f~v~~d 80 (366)
T d1u5ua_ 1 WKNFGFEIFGEKYGQEELEKRIKDEHTPPPDSPVFGGLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVND 80 (366)
T ss_dssp CCCCHHHHHHHHHCHHHHHHHHHHHTSCCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTSCSSSCSEEEEEEEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 97620778877632577664000457899874223475431189999999865411468756654775645999998079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~f~~G~~~Pv~vRfS~~~G~~D~~~d~RG~AiKf~~~~ge~~~D~v~~n~pvF~~rd~~~F~~~~~a~k~~p~ 160 (366)
T d1u5ua_ 81 PKFPEHEFFTAGRTFPARLRHANLKYPDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEGDAA 160 (366)
T ss_dssp CCSCCCSSSCTTCEEEEEEEEEBSSCSCTTSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHHTTCCTTHHH
T ss_pred CHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 01655876179975679999258888865567877369987658987325786337774304798886888860587637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~f~~~~Pe~~~~~~~~~r~~P~s~~~~~y~s~~tf~fvn~~G~~~yvK~~~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (366)
T d1u5ua_ 161 EEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFS 240 (366)
T ss_dssp HHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCCHHHHTTTTCCS
T ss_pred HHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHCCCHHHHHHHCCC
T ss_conf 89987098999999985577999834475002261787847898899999998457776642444323722344321246
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~d~Lr~dl~~~l~~g~~~~~l~vQl~~~~d~d~~~i~D~Tk~Wpe~~~P~~~vG~ltl~~~~~~~e~EqlaF 320 (366)
T d1u5ua_ 241 RHENEKRPDDYLRKEYVERLQKGPVNYRLQIQIHEASPDDTATIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAF 320 (366)
T ss_dssp CCTTCCSCTTHHHHHHHHHHHHSCEEEEEEEEEEECCTTCCGGGGCTTSCCCTTTSCCEEEEEEEEEEECCHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC
T ss_conf 54102576377899999998679954999999546354789998887516886567637879999799897057576524
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
.
T Consensus 321 ~P~~~~pgi~~~~~~~~~d~~si~~~R~~vY~~s~~~R~~~~~~~~ 366 (366)
T d1u5ua_ 321 NIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLV 366 (366)
T ss_dssp CTTCCCTTSCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8755699837778522243442888999999999998754501569
|
| >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27572.35 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~f~~P~~~~~G~gal~~l~~~l~~~g~r~lvvtd~~~~~~~~~~l~~~L~~~~i~~~~~~~~~~p~~~~v~~~~~~ 80 (366)
T d1jq5a_ 1 AAERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANI 80 (366)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHH
T ss_pred CCCCEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 99858958963999039999999999974994899989857899999999999877996999981899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~D~IiavGGGs~iD~aK~iA~~~~~p~i~IPTT~gtgse~t~~avi~~~~~~~~~~~~~~~~P~~vi~Dp~l~~t 160 (366)
T d1jq5a_ 81 ARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIAN 160 (366)
T ss_dssp HHHTTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSCCSSCTTCSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHT
T ss_pred HHCCCCCEEEEECCCCCCCCHHEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHH
T ss_conf 62038868998168864422000120466535402434434320013212323567422110114557789998610432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lP~~~~~sg~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T d1jq5a_ 161 APPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTL 240 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32788898677788899999998860654323034479999999999999987468876667635658999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~g~~~~~~~~~~~H~i~h~l~~~~g~~~~~~HG~~va~g~~~~~~l~~~~~~~~~~~~~l~~~lglP~~L~dlgi~~~~ 320 (366)
T d1jq5a_ 241 LSGLGFESGGLAAAHAIHNGFTALEGEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDAS 320 (366)
T ss_dssp HHHHHHHHHCCCHHHHHHHHGGGSCSGGGGSCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCCCSTTTTTCTTCC
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
T ss_conf 60433467876645211012676237764767633779999999998428899999999999986999999994989777
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
=
T Consensus 321 ~~~l~~ia~~a~~~~~~~~nP~~~t~edi~~il~~a~~~~~~~~~~ 366 (366)
T d1jq5a_ 321 REDILKVAKAATAEGETIHNAFNVTADDVADAIFAADQYAKAYKEK 366 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGGTCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999840874147999999999999999999999987209
|
| >d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SelA-like domain: Hypothetical protein MJ0158 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=100.00 E-value=0 Score=27570.92 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~r~~~~~~~~~~~i~~~g~~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a 80 (366)
T d2aeua1 1 LRLEKARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSA 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHTSTTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CCHHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 96366788899985633330275432688888864889999998438245689999999987068984479996889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia 160 (366)
T d2aeua1 81 ILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA 160 (366)
T ss_dssp HHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 99999983899979994699862419988976288677799999999736877607999945888867879999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~ 240 (366)
T d2aeua1 161 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIY 240 (366)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 00817899956721432364468987662861787136444545521589706778999999972235568779899888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV 320 (366)
T d2aeua1 241 RALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 320 (366)
T ss_dssp HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHCCE
T ss_conf 89986049999999999999999988604111133566667543457630110477760102456879999999981988
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------9
Q 003615 112 ---------------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------------C 112 (807)
-
T Consensus 321 ~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~~~~~ 366 (366)
T d2aeua1 321 ITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFKS 366 (366)
T ss_dssp ECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 9997898889998799951655411089999999999999998459
|
| >d1fn9a_ d.196.1.1 (A:) Outer capsid protein sigma 3 {Reovirus [TaxId: 10891]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Outer capsid protein sigma 3 superfamily: Outer capsid protein sigma 3 family: Outer capsid protein sigma 3 domain: Outer capsid protein sigma 3 species: Reovirus [TaxId: 10891]
Probab=100.00 E-value=0 Score=27506.68 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 MEVRlPNfHSvVE~I~nSYe~rp~~yst~egWd~~~f~~PDVIkVG~AYCCaQCCGVLGapp~~~~~FPHHrCHQq~~R~ 80 (365)
T d1fn9a_ 1 MEVCLPNGHQVVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVCGGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQ 80 (365)
T ss_dssp CCCCCCCHHHHHHHHHHHTTTCCCEEBTTTBTCCSSCCCCSEEEETTEEEETTTTEEEEEGGGTCCSCCCCCCCCCCCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 96446771149999998874577644520131454314876599867587400154336786678607613676776404
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 dtPLLrfvgRvTaH~KRgmLd~~a~~~~~i~D~~~e~~~rv~~egg~lvE~~~~~lD~~s~~~SI~sdWT~PLe~~~dlD 160 (365)
T d1fn9a_ 81 DYVDVQFADRVTAHWKRGMLSFVAQMHEMMNDVSPDDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLD 160 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCCEEEECCGGGSSTTSTTTCTTCCTTSCCCCCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHCCCCCC
T ss_conf 75577655578887765279999999999873077776676636886331333421606653334304677201014420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 tr~D~~~tal~~MIDsSdl~pnf~mrdpshafngvkl~gdarqt~fsrtf~~rsslewgvmvydysele~dp~kgr~yr~ 240 (365)
T d1fn9a_ 161 TKLDQYWTALNLMIDSSDLIPNFMMRDPSHAFNGVKLGGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGRAYRK 240 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTCEESSEESCTHHHHTTSCBCGGGGGCCCCSSCCTTSCCCCCCEEECCHHHHHCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHH
T ss_conf 35789999888600165305332415833322662005740002000025776631444799765663368544502355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 elvtpardfghfglshysrattp~lgkmpavfsgmltgnckmyp~i~gtak~kt~~kl~~avn~~wgvekirya~gpgg~ 320 (365)
T d1fn9a_ 241 ELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCKMYPFIKGTAKLKTVRKLVEAVNHAWGVEKIRYALGPGGM 320 (365)
T ss_dssp HHTSTHHHHCCGGGCCCCEEECCCSTTCCEEECCGGGTSCCEEECCCHHHHHGGGHHHHHHHHHHSCHHHHHHHHCTTHH
T ss_pred HHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
T ss_conf 53673021364441000223671002562565310147621431023620024378899987745403420221168863
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
-
T Consensus 321 tgwy~rtmqqapivltpa~ltmfpdt~kfgd~~~pvmigdpmi~g 365 (365)
T d1fn9a_ 321 TGWYNRTMQQAPIVLTPAALTMFPDTIKFGDLNYPVMIGDPMILG 365 (365)
T ss_dssp HHHHHHHHHHHHHHTSCGGGGCCCSSCSSCSSSSCEEECCCEEEC
T ss_pred CHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 324443453088673468850277742135667863317864369
|
| >d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27504.43 Aligned_cols=1 Identities=0% Similarity=-1.256 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 Mns~G~~~r~tt~GESHG~~ig~vIdG~PaGl~i~~e~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtG~PI~ 80 (365)
T d1um0a_ 1 MNTLGRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIG 80 (365)
T ss_dssp CCEECSSSEEEECCSCCSSEEEEEEECCCBTCBCCHHHHHHHHHHHTTCCSSCCCHHHHSCEEEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCCE
T ss_conf 98764422788515578884489992408688858999999986679999998766899982799027368826577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~~~v~~IG~i 160 (365)
T d1um0a_ 81 FLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGI 160 (365)
T ss_dssp EEEECCCSCCCCCCCCTTBCCTTSTHHHHHHHHCCCCCCCTTCSTHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEETTE
T ss_pred EEECCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
T ss_conf 55414656751456664257777761111100785367888618899999999999999988875471589999944544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gv~~~~g~P~GlG~P~f~kLda~LA~A~mSI 240 (365)
T d1um0a_ 161 KAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYAKLDAKIAEAMMGL 240 (365)
T ss_dssp ECSSCCHHHHHHSTTCBSCHHHHHHHHHHHHHHHHTTCCBCEEEEEEEEESSTTCCCCSCCSBTTTBCHHHHHHHHHHTS
T ss_pred CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 45431011202444036872667888999999985188768668999855643444786557876421236999877425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 pAvKgVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~aGGi~GGiSnG~pI~~rva~KP~sSI~~pq~Tvd~~~~e~~~~~~ 320 (365)
T d1um0a_ 241 NGVKAVEIGKGVESSLLKGSEYNDLMDQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLK 320 (365)
T ss_dssp TTEEEEEETTGGGGGGSBHHHHCCCEETTEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCEEEEBTTSCEEEECCC
T ss_pred CCEEEEEECCCHHHHHCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEC
T ss_conf 33235641454666652576506732478874567785105767887669999957875567755435779987776016
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
-
T Consensus 321 gRhDpCivprA~~V~EAm~alvlaD~~L~~~~~~~~~~k~~~~~~ 365 (365)
T d1um0a_ 321 GRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN 365 (365)
T ss_dssp SCCCSCTHHHHHHHHHHHHHHHHHHHHHHGGGSBHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988970726528999999999999999997563599999874179
|
| >d2pnwa1 b.52.1.4 (A:5-369) Membrane-bound lytic murein transglycosylase A, MLTA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=27502.52 Aligned_cols=1 Identities=0% Similarity=-2.022 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 f~l~pvsf~~LPGW~~Dd~~~al~Af~~SC~~l~~~~~~~~~~~~~t~~~~~~~c~~a~~~~~~~~~~aR~Ffe~~F~py 80 (365)
T d2pnwa1 1 FSIDEVSFRDLPGWGQDDPRKLFPAMATILSHLRNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPF 80 (365)
T ss_dssp CEEEECCGGGSTTGGGCCCTTHHHHHHHHHHHHTSSCCCCCCTTCCCHHHHHHHHHHHHHCCCCSHHHHHHHHHHHEEEE
T ss_pred CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE
T ss_conf 96337188778894112499999999999998721785545666778999999999998535699899999999718899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~~~~~~~Gl~TGYYEP~l~gS~~~~~~y~~PlY~~P~dLv~vdl~~f~~~l~~~~~~gR~~~~~~~py~~R~~I~~g~ 160 (365)
T d2pnwa1 81 RISPAQGKSGFVTAFYEPELEVSATPDDVWRYPIYRRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGC 160 (365)
T ss_dssp EEEC----CEEEEEEEECEEEEESSCCSSSCEEEEBCCTTEEECCTTTCCTTCCTTCCEEEEETTEEECCCCHHHHHTTT
T ss_pred EECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
T ss_conf 94048987536898667767000378988987744689531006622255434665302443168766777445554465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~g~elaw~~d~vd~fflqIQGSgrv~l~dG~~~rv~yag~NG~pY~sigr~Li~~G~i~~~~~sm~~ir~wl~~nP~ 240 (365)
T d2pnwa1 161 LRGRGLEIAWARSKVDLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWLADHPD 240 (365)
T ss_dssp TTTSSCEEEEESCHHHHHHHHHHTEEEEECTTSCEEEEEEEEECSCCCCCHHHHHHHTTCSCTTTCCHHHHHHHHHHCGG
T ss_pred CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHCHH
T ss_conf 46778623673685777886303617999089998999871678986505679998768878210799999999997969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~ll~~N~syvFFr~~~~~~~~~Gp~Ga~gvpLtp~rSiAvD~~~~plG~p~~l~~~~~~~~~~~~~~~rl~~aqDTG 320 (365)
T d2pnwa1 241 EVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFFIHAPTLTHLDDGKPFARLMLALDTG 320 (365)
T ss_dssp GHHHHHTTCCCCEEEEEC-------CCBCTTSSBCCTTTEEECCTTTCCTTCEEEEEETTCCTTTTTSCEEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999860997599887788776789756137120125035405542578865999656777689987100669997446
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
=
T Consensus 321 gAIkG~~R~D~f~G~G~~A~~~Ag~~~~~g~~~~Llpk~~~~r~~ 365 (365)
T d2pnwa1 321 SAIVGPARGDIFTGSGFEAGELAGTVRNEADFYILLPRIAAERYR 365 (365)
T ss_dssp TTCCSTTEEEEEEEESHHHHHHHHTCEEEEEEEEEEEHHHHGGGC
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCHHHHCC
T ss_conf 523689726997408889998860768744799998734354439
|
| >d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RPA4359-like domain: Hypothetical protein RPA4359 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=100.00 E-value=0 Score=27499.59 Aligned_cols=1 Identities=0% Similarity=-1.956 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~L~~~i~~~i~~~G~i~f~~fM~~~LY~p~~GYY~~~~~iG~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~~~~ 80 (365)
T d1zkda1 1 IDQTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 80 (365)
T ss_dssp CCSSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 97207899999999956985599999997079986344789978899886788734799999999999999997177766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l~~~~~i~w~~~~~~~~~~~g~iiaNE~fDA 160 (365)
T d1zkda1 81 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFDV 160 (365)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEEEEECCCCCC
T ss_conf 16995188611788866554123311355405898435456778898874166540111474243558759993255755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lPv~~~~~~~~~~~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~G~~l~i 240 (365)
T d1zkda1 161 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRDQGGAALII 240 (365)
T ss_dssp SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHHHCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 00128997475421322232255204776310212467763033443147886323565899998765666405653433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 DYG~~~~~~~~~l~~~~~h~~~d~l~~pG~~DIT~~VnFs~L~~~~~~~g~~~~~~~tQ~~FL~~~GI~~~~~~l~~~~~ 320 (365)
T d1zkda1 241 DYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAKAT 320 (365)
T ss_dssp EEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 10045554444203344443366213898753265118899999987458615234358999997889999999975399
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~Li~p~~~~MGe~FKVl~~~~~~~~~~~gf~~~ 365 (365)
T d1zkda1 321 PQVSEDIAGALQRLTGEGRGAMGSMFKVIGVSDPKIETLVALSDD 365 (365)
T ss_dssp HHHHHHHHHHHHHHHCEETTEETTTEEEEEEECTTCCCCTTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCHHCCHHEEEEEEECCCCCCCCCCCCC
T ss_conf 889999999999726988100211279999817999988898999
|
| >d1u1ha2 c.1.22.2 (A:396-760) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27499.25 Aligned_cols=1 Identities=100% Similarity=0.405 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~lpTT~VGS~PRp~eLk~a~e~~~~G~is~eel~~~~~~ai~~~v 80 (365)
T d1u1ha2 1 EGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVV 80 (365)
T ss_dssp THHHHHTTTTSSCCCSSSCCHHHHHHHHHHHSCCCSSCBBCCSBCCCCSCCC-------------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 96899988089865267983789999999847999986232477889989999999976699999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~Q~~aGidiItDGE~~r~d~~~~f~~~l~G~~~~~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~~~~~~k 160 (365)
T d1u1ha2 81 DLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 160 (365)
T ss_dssp HHHHTTCCSBBCCBCTTCSCTTHHHHTTSTTEECCSSCCEEEETTEEECCCEECSCCCCCSCSSHHHHHHHTTSCSSCBE
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99998479967639813035999999752670000464157469711066041475446676408999998850122234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~i~gp~~l~~~~~~~~y~~~~e~~~dLa~ay~~el~~L~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 240 (365)
T d1u1ha2 161 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN 240 (365)
T ss_dssp EEEECHHHHHHTSEECSSSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTTTTTCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45550368853126668899899999999999999999996699389957628764321242159999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~v~~~~~~g~~~~~~~~l~~l~vd~l~le~~~~~~~~l~~~~~~~p~~K~l~~GVVd~r~~~~E~~e~v~~ri 320 (365)
T d1u1ha2 241 CGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRV 320 (365)
T ss_dssp TTSCTTSEEEEEESCSCCTTTHHHHHTTCCSEEEECCSSSCGGGGGGTSSSSCCCSEEEECCSCTTSSSCCCHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 43566655899732655412478885477420001103586278887775288998899888827999879999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
=
T Consensus 321 ~~a~~~v~~erl~lspdCGf~~l~~~~a~~KL~~lv~~a~~vr~e 365 (365)
T d1u1ha2 321 NKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQ 365 (365)
T ss_dssp HHHHTTSCTTTBCBCCSSCCTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999973885539981888999799899999999999999999659
|
| >d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Pyruvate dehydrogenase E1-alpha, PdhA species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27502.33 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~p~ls~e~l~~~yr~M~l~R~~e~~~~~l~~qG~ig~~h~~~GqEa 80 (365)
T d1w85a_ 1 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEA 80 (365)
T ss_dssp CCCCCHHHHHHHHHHTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHH
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 98797433321022139769999999999885457999999999999999999999999999997799656008898699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~vg~~~~l~~~D~i~~~yR~hg~~la~G~~~~~~~~~~~G~~~g~~~~~~~~~~~~~~ivG~~~p~AvG~A~a~k~~~~ 160 (365)
T d1w85a_ 81 SQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK 160 (365)
T ss_dssp HHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGGGGCCCTTCCBCCCCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCEEEECCCCHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99999986797687631366112255569999999986279988667888755605533357666412567765643046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~~aist~~~~~~~~~~~~~r~~~~Gi~~~~vDG~D~~~v~~ 240 (365)
T d1w85a_ 161 KAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYA 240 (365)
T ss_dssp SCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf 88146631677643126888887764336674379997024333322202133211111012357617981440687999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~~~A~~~~R~g~gP~lie~~tyR~~gHs~~dd~~~~YR~~eEi~~w~~~DPI~~~~~~L~~~g~~~~~el~~i~~e~~~ 320 (365)
T d1w85a_ 241 AVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKE 320 (365)
T ss_dssp HHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999997423796179974134356667868863124774789998848989999999998799999999999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
=
T Consensus 321 eV~~A~~~A~~sP~P~~~~l~~~Vy~e~p~~l~eq~~~~~~~~~~ 365 (365)
T d1w85a_ 321 EIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 365 (365)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999868998989998453238998899999999887469
|
| >d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=100.00 E-value=0 Score=27501.97 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~k~~r~~l~fdDVllvP~~st~~s~~vdl~~~it~~~~~~iPIIsA~MDtV~~~~mA~~ls~~Gglgvlhr~~~~~ 80 (365)
T d1zfja1 1 SNWDTKFLKKGYTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSIT 80 (365)
T ss_dssp CGGGGSSCCCCCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHH
T ss_pred CCCCHHHHHCCCCCCEEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCHH
T ss_conf 97211223026880108985787776776726237964895268988978988768889999999779916974866789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 e~~~~~~~~~~~~~~~~v~aavGv~~~~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~~~~~~iIaGNV~T~e 160 (365)
T d1zfja1 81 EQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAE 160 (365)
T ss_dssp HHHHHHHHHHHHTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHH
T ss_conf 98877665443037569999944681277899999986998899978865543214788999865887644411343489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~a~~L~~aGaD~VkVGiG~Gs~CTTr~~tGvGvPq~sai~~~~~~~~~~~~~iIADGGi~~~GDi~KAla~GAd~VMlG~ 240 (365)
T d1zfja1 161 GARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 240 (365)
T ss_dssp HHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf 99999866976378640256445676301342242138999999997579569805884762066655321587898642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~lAg~~EsPG~~~~~~g~~~k~~~Gm~s~~a~~~~~~~r~~~~~~~~~~~~~~eG~~~~v~~~G~~~~~~~~l~gglrs~ 320 (365)
T d1zfja1 241 MFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSG 320 (365)
T ss_dssp TTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 21046678974797778475552775557555456644434455443221224684478546787789999999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
-
T Consensus 321 m~y~G~~~l~e~~~~~~fv~vt~~~~~E~~~h~~~~~~~~~~y~~ 365 (365)
T d1zfja1 321 MGYVGAGDIQELHENAQFVEMSGAGLIESHPHDVQITNEAPNYSV 365 (365)
T ss_dssp HHHTTCSSHHHHHHHCCEEECCHHHHHHHSCCSSCCSSCBTTBC-
T ss_pred HHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 762487749999629889999922010258862577157899869
|
| >d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Fe-only hydrogenase superfamily: Fe-only hydrogenase family: Fe-only hydrogenase domain: Fe-only hydrogenase, catalytic domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=100.00 E-value=0 Score=27496.63 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~i~~v~~~l~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~~~ 80 (365)
T d3c8ya1 1 HMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIEN 80 (365)
T ss_dssp CHHHHHHHHHCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97899999968995899998927899999984899430028999999998699999983788899999999999999865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~P~isS~CPg~V~yiEk~~PeLip~ls~v~SP~~~~g~liK~~~~~~~~~~~~~i~~V~I~PC~aKK~Ea~r~e~~~ 160 (365)
T d3c8ya1 81 NGPFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEK 160 (365)
T ss_dssp TCSCCEECCCCHHHHHHHHHHCGGGGGGBCCBCCHHHHHHHHHTTHHHHTTCCCGGGEEEEEEESCSHHHHHHTCTTSEE
T ss_pred CCCCCEEEECCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
T ss_conf 89987598479899999999675653325678888999999999987876099911289999834643224542821245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~dVD~VLT~~El~~~l~~~~i~~~~l~~~~~~~~~~~~s~~g~~~~~sGG~~~~~~~~~~~~~~~~~~~~~~~~~~r 240 (365)
T d3c8ya1 161 DGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVR 240 (365)
T ss_dssp TTEESCSEEEEHHHHHHHHHHTTCCGGGCCCCCCCGGGTCCCHHHHTTTSTTHHHHHHHHHHHHHHHTCCCSCCCCGGGC
T ss_pred CCCCCCCEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECC
T ss_conf 78987488953999999999759992238886668766777866512123663999999998774368865552024306
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~~~i~~~~~~~~~~~~~~~~v~G~~n~~~~l~~~k~~~~~~~fvEvmACpgGCinGgGq~~~~~~~~~~~~~~~~r~~~ 320 (365)
T d3c8ya1 241 GLNGIKEAEVEINNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASV 320 (365)
T ss_dssp SSCSEEEEEEEETTEEEEEEEEESHHHHHHHHHTSGGGSSCCCEEEEESSTTSGGGCTTSCCCCHHHHHHSCHHHHHHHH
T ss_pred CCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87751899997089178999960299999999987459999728998068998707998688896013268999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
=
T Consensus 321 l~~~d~~~~~r~~~en~~~~~ly~~~l~~p~~~~~~~lLHT~y~~ 365 (365)
T d3c8ya1 321 LYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKYKK 365 (365)
T ss_dssp HHHHHHHCSCCSGGGCHHHHHHHHHTTCSTTSHHHHHHSBCCCCC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
T ss_conf 875430377788855999999999986799838999972687029
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=100.00 E-value=0 Score=27494.12 Aligned_cols=1 Identities=0% Similarity=-1.225 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~ 80 (365)
T d1jofa_ 1 PLHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEEEC
T ss_conf 91199999314999899999858889389845445168999777999489899999938947899990899769876412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~ 160 (365)
T d1jofa_ 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 89986789987899879999932799789986745788742068664033004764675568898115978889999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T d1jofa_ 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEECCCCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCC
T ss_conf 82079987999970688716652511112788740899988998669995158998999995598753778731240245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~ 320 (365)
T d1jofa_ 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCC
T ss_conf 56556665444435776316998999978997135787542279999856887144676766777679986478964899
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------9
Q 003615 112 --------------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------------C 112 (807)
=
T Consensus 321 G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~vp~p~~~~~~~w~~ 365 (365)
T d1jofa_ 321 DEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIWYD 365 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEECC
T ss_conf 999999967999499999828867278999889999976879639
|
| >d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 8, HDAC8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27423.67 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~pvyiy~~~~~~~~~~hP~~P~R~~~~~~ll~~~gl~~~~~~v~p~~At~~el~~vHs~~Yi~~l~~~~~~~~~~~~~~ 80 (364)
T d1t64a_ 1 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS 80 (364)
T ss_dssp CCCEEECCHHHHHHHTCSSSSCCHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHCSSCCTTT
T ss_pred CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98869969888416799898829999999999974996688896889799899998299999999998604026444112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~l~~d~p~~~~~~~~~~~~aG~~l~A~~~~~~g~~~~a~~~~gg~HHA~~~~a~GFC~~NdvaiA~~~~~~~~~RV~ 160 (364)
T d1t64a_ 81 IEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERIL 160 (364)
T ss_dssp TTTTCBTTBCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTCSCEE
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
T ss_conf 01067888887703999999985028999999875986500345754464333444454555689999999985103079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 iiD~DvHhGnGtq~iF~~d~~V~~~SiH~~~~~~~Pgtg~~~e~G~g~g~~~~~NvPL~~g~~d~~y~~~~~~~i~~~~~ 240 (364)
T d1t64a_ 161 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQ 240 (364)
T ss_dssp EEECSSSCCHHHHHHHTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98523577776044420687544533345567778898873105876445632334125565738999999976678862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~~~p~~~~~~GGY~~~~~ar~w~~~~~~l~g~~~~~~~P~ 320 (364)
T d1t64a_ 241 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 320 (364)
T ss_dssp HHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCCCCSBCCC
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 57998899989714778997778727998999999999835998799979888878999999999999859988866898
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~p~~~~~~~~~~~~~~n~~~~~~~i~~~i~~~l~~~~ 364 (364)
T d1t64a_ 321 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 364 (364)
T ss_dssp CTTGGGGTTTCBSCCCCCSCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 50155409973136686656566999999999999999987429
|
| >d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=0 Score=27422.63 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~tP~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~v~~~~~~~~~~~~~~~~~ 80 (364)
T d2jera1 1 AKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQNCRRQLPPE 80 (364)
T ss_dssp CCBCCSCCHHHHTCBCCCTTSCEEEEEEECCCCTTTSGGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC
T ss_conf 98456899111387748995500328997689985204677999999999999985887399997928999999757566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 v~~~~~~~dD~W~RD~GPi~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~D~~~~~~ia~~~~~~~~~~~~lvlEGG~i 160 (364)
T d2jera1 81 ITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSF 160 (364)
T ss_dssp SEEEECCCSSSCHHHHSCEEEECTTSCEEEEEEECCTTTHHHHCSSSCCTTGGGHHHHHHHHHTCCEEEEEEEECCGGGE
T ss_pred EEEEECCCCCHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCE
T ss_conf 49999368875764551389991677567633664687655555555410278999999998366544665737748966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~dG~GtlltTe~~ll~~nRNp~ls~~~ie~~Lk~~LGv~~viwl~~gl~~DdTdGHID~~arFi~~~~il~~~~~d~~~ 240 (364)
T d2jera1 161 HVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQNS 240 (364)
T ss_dssp EECSSSEEEEEHHHHTSTTTCTTSCHHHHHHHHHHHHTCSEEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCCTTS
T ss_pred EECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC
T ss_conf 97799639975455514578999899999999999869863677658755677777754448994799569984388878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~L~~~~da~G~~~~i~~lp~P~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP~fg~ 320 (364)
T d2jera1 241 PFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGD 320 (364)
T ss_dssp TTHHHHHHHHHHHHTCBCTTCCBCEEEEECCCSSCEECCTTSCCCCCTTSCCCCTTCEECCCTTCCEEETTEEEEEECSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCC
T ss_conf 35799999999997656534898558862689742333333344534575435689886202578999999999902798
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
=
T Consensus 321 ~~D~~Al~~l~~~fP~r~Vv~I~~~~i~~~gG~iHCiT~q~P~~ 364 (364)
T d2jera1 321 ENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIHXITQQEPKR 364 (364)
T ss_dssp TTHHHHHHHHHHHSTTSEEEEEECHHHHTTTCCTGGGCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCC
T ss_conf 77899999999888899799971089875698014463127999
|
| >d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]
Probab=100.00 E-value=0 Score=27422.08 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~pLFsP~~ig~~~LkNRiv~apm~~~~a~~g~p~~~~~~~y~~rA~gGgliite~~~V~~~g~~~~~~~~l~~d~~ 80 (364)
T d1icpa_ 1 QVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQ 80 (364)
T ss_dssp CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEECCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCEECHHHH
T ss_conf 99898899972489999678427524489858999797999999999983964999710788873357999853134344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 i~~~k~l~~~ih~~g~~~~~QL~H~Gr~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~~f 160 (364)
T d1icpa_ 81 VEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEF 160 (364)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 45677888886237882577640477554554445788875323456531112346565678887311066799999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~aA~rA~~AGfDgVeIH~ahGyLl~QFlSp~tN~RtDeYGGsleNR~Rf~~Eii~aIr~~~g~~~i~~r~s~~~~~~~~ 240 (364)
T d1icpa_ 161 RVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEA 240 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
T ss_conf 99999999839986898305762131200110077675444204320167898765420124886466886043224677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~vi~~g~~~~~~ae~~l~~g~aD~V~~ 320 (364)
T d1icpa_ 241 GDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 320 (364)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEHH
T ss_conf 67516777889987752032245665158655455455447889999986478789978989999999998699765056
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 gR~~iadPd~~~k~~~g~pi~~~~~~~~~~~~~~~g~~~~p~~~ 364 (364)
T d1icpa_ 321 GRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 364 (364)
T ss_dssp SHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 79999790499999709998988611342799998848798889
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=27421.66 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a 80 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA 80 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 96999992789936622589875996799758735789985477788564999998999998999999996698503552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 YGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~ 160 (364)
T d1sdma_ 81 YGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMV 160 (364)
T ss_dssp ECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 23478776201656766551367899998865531034655369999888723632233576545554433133146760
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~~~~~~ 240 (364)
T d1sdma_ 161 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGS 240 (364)
T ss_dssp EEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCCCC---
T ss_pred CCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECHHHCCCCCCCCC
T ss_conf 20353000117788978986406600044534354103336359999999703676503567998404100352001466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak 320 (364)
T d1sdma_ 241 AGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVR 320 (364)
T ss_dssp ------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 67502332335643206899999997499757730112138878634999509999996987001899999999999984
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
=
T Consensus 321 ~i~n~p~~n~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~l~~e 364 (364)
T d1sdma_ 321 SIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364 (364)
T ss_dssp TCCCCCCCCEECHHHHHHHTTTTCC-----------CCEECCCC
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 20667835579899999999999999998744027799997559
|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpX species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27421.65 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvG 80 (364)
T d1um8a_ 1 LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSG 80 (364)
T ss_dssp CCSCCCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSS
T ss_pred CCCCCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 97779887999999589623808999999999998998887788764044443311112233456787532441899863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 KTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~ 160 (364)
T d1um8a_ 81 KTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSG 160 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------C
T ss_pred HHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 78999999864435331112220144316676312103445420245899865463010166653134544555512214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d1um8a_ 161 EGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILH 240 (364)
T ss_dssp HHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGG
T ss_pred HHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 38898645540586122587778767764168996113455411131014566543014454310001100124666530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~G 320 (364)
T d1um8a_ 241 LVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTG 320 (364)
T ss_dssp GCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCC
T ss_conf 24578776530079999872301557402099999999879999999999998757927999899999999956587778
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 AR~L~riie~~l~~~~f~~p~~~~~~v~I~~~~V~~~~~~~~i~ 364 (364)
T d1um8a_ 321 ARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIA 364 (364)
T ss_dssp GGGHHHHHHHHHHHHHHTGGGGTTSEEEECHHHHTTSSCCEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCCCEEEC
T ss_conf 36789999999999855587789999997778867998881439
|
| >d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=27421.13 Aligned_cols=1 Identities=0% Similarity=-1.489 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~waD~~r~~~v~aN~~~~~d~~~A~~~GAdGIGL~RTEflfl~~~~~p~~~~~~~~~~~e~~~~ 80 (364)
T d1kbla1 1 IETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREE 80 (364)
T ss_dssp CCEECCCCCHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHTTCCSEEEECCTHHHHSHHHHHHHHHHHHCCSHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 99768887448999999877467107998289999999999769971548888998727876540566663367266799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~q~~~y~~i~~~~~g~pvtiRtlD~g~dk~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~E~NP~LG~RGiR~ 160 (364)
T d1kbla1 81 ALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRL 160 (364)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTTCCEEEECCCSCGGGGSCCSHHHHHHHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998887877899999860898679851568864467873156899998739987887665424455784224433213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~~p~lf~~QlrAilrA~~~~~~~~g~~~~~~Im~Pmv~~~~E~~~~k~~i~~~~~~l~~~~~~~~~~~iG~MiE~Psa 240 (364)
T d1kbla1 161 AVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRA 240 (364)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHH
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
T ss_conf 42665236888999999999978843875431441131304999999998888899997530387766148775011599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 al~~d~~~~~vDF~SIGTNDLtQy~la~dRd~~~~~l~~y~~~~i~~~dP~~~~~~~av~~lI~~~~~~~~~~~~~i~vs 320 (364)
T d1kbla1 241 ALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCG 320 (364)
T ss_dssp HHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 97189987327679963306878887433253255665554420022375104406999999999999999737998699
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 iCGE~asdp~~~~~L~~lGi~~lS~sp~~vp~~r~a~aqa~~~~ 364 (364)
T d1kbla1 321 ICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN 364 (364)
T ss_dssp ECSGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 71731159999999998699989978046699999999987439
|
| >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27419.81 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~m~~~~~~P~rii~G~gal~~l~~~l~~~g~r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~v~~~~~~~~~i~~~~~~~ 80 (364)
T d1kq3a_ 1 HMITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLV 80 (364)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHHTTCSEEEEEECHHHHHHTTCTTGGGGCSSSEEEEEECCSSCBHHHHHHHHTTC
T ss_pred CCCCCEECCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 99755778978798059999999999973993899989865564799999998886698699618989807999999975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~D~IIavGGGs~~D~aK~ia~~~~~P~I~IPTTa~tgse~t~~avi~~~~~~~k~~~~~~~~P~~viiDp~l~~t~P 160 (364)
T d1kq3a_ 81 EEETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAP 160 (364)
T ss_dssp CTTCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSCCCSCTTSSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHHSC
T ss_pred HCCCCEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCHHHHHHH
T ss_conf 20576899813675410101223334210124225433332446513786326775311200244533887716666435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 240 (364)
T d1kq3a_ 161 ARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLS 240 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88886217888653777765554214001015555568999999999999988887777640337999999999877875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~~~~~~~~~~~H~~~~~~~~~~~~~~~~HG~~va~~~~~~~~~~~~~~~~~~~i~~l~~~lglP~~L~elGi~~~~~~~ 320 (364)
T d1kq3a_ 241 GLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDED 320 (364)
T ss_dssp HHHHHHHCCCHHHHHHHHHTTSGGGTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCSGGGGTCTTCCHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHH
T ss_conf 34213445566520002254523764202107899889999875406799999999999985999989992999998999
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 l~~ia~~a~~~~~~~~~~P~~~t~edi~~il~~A~~~~~~~~~~ 364 (364)
T d1kq3a_ 321 LMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL 364 (364)
T ss_dssp HHHHHHHHTCTTSGGGGSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998727775658996899999999999999998875579
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27419.68 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 97776851018842889099999999999799999984587542667999999999999985089985889999999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCC
T ss_conf 88999991489838999873255327899999999999999999779622044422167858896798220102333788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 240 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 64331134554216876038999844104677899999985999888899899999998604688878877899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d1omwa3 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 320 (364)
T ss_dssp HHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------------CCCCSSSSGG
T ss_pred HHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHH
T ss_conf 99856698880887435799997491023789879962889959379988888687454665881011379889757899
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~q~~~ 364 (364)
T d1omwa3 321 YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGH 364 (364)
T ss_dssp GTTCCEECHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
T ss_conf 84687657637788888876644526578888642271633389
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=100.00 E-value=0 Score=27418.82 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~l~~~~~~~f~~G~av~~~~~~~~~~~~~~~~~~~~~~~fn~~t~eN~mKW~~iep~~G~~nf~~~D~~v~~a 80 (364)
T d1us3a2 1 AYSANVDHLRDLAPSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWA 80 (364)
T ss_dssp CCCCCCSCGGGGCSSSCCEEEEEBCTTCTTTBTTTCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 97564358999703689478885276555422246778999999768823165467768855889836838999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~gi~v~GH~lvW~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~ 160 (364)
T d1us3a2 81 TENNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAF 160 (364)
T ss_dssp HHTTCEEEEEEEEECCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHH
T ss_pred HHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 98889899950687865578643235786579999999999999987524688357999860444578876556666437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~~~i~~~ 240 (364)
T d1us3a2 161 YVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAA 240 (364)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 77708833999999999998640343211565334663134678999999986899655532410025799998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D~~sW~~ 320 (364)
T d1us3a2 241 MKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLD 320 (364)
T ss_dssp HHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHHH
T ss_pred HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 99998549905887404741467665444444688875899999999999999998455623455699815874876556
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
.
T Consensus 321 ~~~~~~~~~~~~~~~lL~d~d~~pKPAy~av~~~L~g~~~~~~~ 364 (364)
T d1us3a2 321 GLYREQFEDEKISWPLLFDNNYNDKPALRGFADALIGTQCTNTH 364 (364)
T ss_dssp HHTTTTTTTCCCCCCSSBCTTSCBCHHHHHHHHHHHTCCCCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 87777666666687866889989988999999997799887889
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=27420.86 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~ripsl~~~~~~~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~ 80 (364)
T d1w0pa3 1 VIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPI 80 (364)
T ss_dssp EEECTTCEEEEEEECSSSTTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE
T ss_conf 93468973547989807899899999623378998655896459999937897589998883158877786534577699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 160 (364)
T d1w0pa3 81 YDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIVNPGPGHGITLTRQQNISGSQNGRLIYPAI 160 (364)
T ss_dssp EETTTTEEEEEEEEEETTCCSGGGCCCTTSCCEEEEEEEETTTTEECCCEEECCSSCCEECCCCTTSTTCCTTCEEEEEE
T ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 97999969999975178877566455355448579986579998512352146420003505797120351992999788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~l~~~~R~~~~~~~~~~~~~~~~~~ 240 (364)
T d1w0pa3 161 VLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQF 240 (364)
T ss_dssp EESSSCEEEEEEEESSSSSSCEECCCCCCCEEESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 50578885037885168857886455676665334544345788722699965865678998157865577688975999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~gR~~~~l~~S~D~G~TW~~~~~l 320 (364)
T d1w0pa3 241 LSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQL 320 (364)
T ss_dssp EESSSSSSCEEEEEEEGGGSTTCCSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEEEC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEE
T ss_conf 97589842235546753335776788632014776057896389996787876577860125999984799679997497
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 ~~g~~~Ys~~~~~~~g~~~~~ye~~~~~i~~~~~~~~~l~~~~~ 364 (364)
T d1w0pa3 321 VNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLT 364 (364)
T ss_dssp CSSBCCSEEEEECSSSEEEEEEECGGGCEEEEEEEHHHHGGGTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEHHHHHCCCC
T ss_conf 28997787327928998999999499838999987999521059
|
| >d1oc7a_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Humicola insolens, Cel6a [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Humicola insolens, Cel6a [TaxId: 34413]
Probab=100.00 E-value=0 Score=27418.28 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~p~~gNPf~g~~~yvnP~~~~~v~~~a~~~~~d~~~~a~~~~va~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 80 (364)
T d1oc7a_ 1 APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ 80 (364)
T ss_dssp CCCCSCTTTTCEECCCHHHHHHHHHTTGGGCCCHHHHHHHHHHTTSCCCEEECSGGGTTTHHHHHHHHHHHHHHTTCSSC
T ss_pred CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99789988898332474077899999873468988999999985378279711477777522778999999987214788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~lVvY~iP~RDC~a~as~Ge~~~~~~g~~~y~~Yid~I~~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~ 160 (364)
T d1oc7a_ 81 YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST 160 (364)
T ss_dssp EEEEEEECCCTTCSTTSSSCCCCCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECTTSTHHHHHCTTSHHHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 51389994799987320004897545766468899999999999975688634999777622223306880666778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~i~yAi~~l~~pnv~vYlDaGhsgWLgw~~n~~~~a~~~a~~l~~ag~~~~vrGFatNvsNy~~~~~~~~~~~~~~n 240 (364)
T d1oc7a_ 161 YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN 240 (364)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEECCCTTTTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTCCCCSSCSSCCGGGTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999997169973899978877666760001268999999998647864343378704477666667887544578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~dE~~y~~~l~~~l~~~G~~~~fvIDTsRNG~gp~~~~~~g~WCN~~GaglG~rPt~~t~~~~vDA~lWIKpPGESDG 320 (364)
T d1oc7a_ 241 PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG 320 (364)
T ss_dssp SCCSHHHHHHHHHHHHHHTTCCCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 76259999999999997458887448870467889877778888779999826889978999877677887588847788
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~D~~C~~~~a~~~aP~AG~Wf~~~f~~Lv~NA~P~f 364 (364)
T d1oc7a_ 321 TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF 364 (364)
T ss_dssp CCCTTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 88876666676667655789998677752999999997268999
|
| >d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SepSecS-like domain: Selenocysteinyl-tRNA synthase (SepSecS) species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=27416.34 Aligned_cols=1 Identities=0% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~n~~~~~~~~~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e~~~~t~g~t~a~~~~~~ 80 (364)
T d2e7ja1 1 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMH 80 (364)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 97566841027968999999999984477510034666411135708999999999998695979997969999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~ 160 (364)
T d2e7ja1 81 SLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVK 160 (364)
T ss_dssp HHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHH
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCH
T ss_conf 98679967974046431110688851211798630356433257999976655410467716999605779984552311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d2e7ja1 161 KIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGC 240 (364)
T ss_dssp HHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTC
T ss_pred HHEECCCCCCCHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 00000023321111144323444320133332213530331012788888999988799999985156657663333310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d2e7ja1 241 TARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRE 320 (364)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHH
T ss_conf 03235799999999988999999987777788999999975986457888876559983541477789753256677988
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------9
Q 003615 112 -------------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------------C 112 (807)
-
T Consensus 321 l~~~~~~~~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~ys 364 (364)
T d2e7ja1 321 LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS 364 (364)
T ss_dssp HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 87658713457876269980567999999999999999999759
|
| >d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27352.67 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~s~~e~l~~eA~~Fi~~~y~e~~~~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V~D~ 80 (363)
T d1m7va_ 1 GSHMEILWNEAKAFIAECYQELGKEEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDR 80 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
T ss_conf 97678999999999999998648632489999999999974177438999998878998714552323002275725656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 R~v~t~~~m~eal~~Hl~~AtN~G~Ir~~ITVF~p~~~~~~~~RIwN~QLirYAGY~~dg~iiGDP~~vefT~~c~~lGW 160 (363)
T d1m7va_ 81 RDVRTKEDVRDALFHHIETATNNGKIRPSITIFPPEEKGEKQVEIWNHQLIRYAGYESDGERIGDPASRSLTAACEQLGW 160 (363)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHGGGSCCCEEEECCCCSSSCCSEEECCSBSSCBCEEC--CCCEECGGGHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 68999899999999999997079987623898078778999865644888866175889983689526899999997599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~t~FDvLPlviq~~g~~~P~~feiP~~lvlEV~i~HP~~~~f~~LgLkWyavP~iS~M~L~iGGi~y~aaPFNGWYM 240 (363)
T d1m7va_ 161 RGERTDFDLLPLIFRMRGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYM 240 (363)
T ss_dssp CCCCCTTCBCCEEEEETTCSSCEEECCCTTTCCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEECCCHHHEEEECCCCCCCHHHHHCCCCEEECHHHCCCHHHCCCEEECCCCCCCCEE
T ss_conf 99899888403899967999981331887783675157989755776698632032332240310888542456343422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~TEIgaRnl~D~~RYn~L~~VA~~mGlDt~~~~sLWkDrAlvElN~AVLhSF~~~gVtivDHHtas~~F~~f~~~E~~~~ 320 (363)
T d1m7va_ 241 GTEIGARNLADEKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKRFEEQEEEAG 320 (363)
T ss_dssp HHHHHTTTTTCTTTTCCHHHHHHHTTCCCSCGGGTHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHHHHHHHHHHHHHTT
T ss_pred EHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHC
T ss_conf 00230244555777774799999948888997215778899999999999999879647052788999999999999818
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
=
T Consensus 321 r~~~gdW~WlvPP~S~s~tpvfH~~~~~~~~~Pnf~yq~~pw~ 363 (363)
T d1m7va_ 321 RKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDKPYE 363 (363)
T ss_dssp CCCBCCHHHHSCSSSGGGSGGGGSCCBCCCCSSEEECCCCTTC
T ss_pred CCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9999984377788864344277776544445887502788899
|
| >d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
Probab=100.00 E-value=0 Score=27351.92 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGilAADeS~gT~~Krl~~igventeenr~~yR~~lftsp~f~~~~IsGvILfe 80 (363)
T d1zaia1 1 PHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFH 80 (363)
T ss_dssp CCCCCSSCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999980589869982689983777898769999778999999987148512205446897648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLd~L~~rl~~y~~~Ga~faKwRsVi~i~~~~ps~ 160 (363)
T d1zaia1 81 ETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSA 160 (363)
T ss_dssp HHHTCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCSSSCSCH
T ss_pred HHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
T ss_conf 87511225998622566515854467347653336788644135662239999999986686513112102235677740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~v~~~l~~~~V~leg~lLKpnMv~~g~~~~ 240 (363)
T d1zaia1 161 LAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACT 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 24899899999999999865842002353442476315788999999999999876412323467501355666754355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamNk~~~~~pW~lsfSfgRALQ~~~lk~W~g~~~n~ 320 (363)
T d1zaia1 241 QKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENL 320 (363)
T ss_dssp SCCCHHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESHHHHHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCH
T ss_conf 54886675566555654058977772110578765889999999986036899976999751766489999847882258
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
.
T Consensus 321 ~aaQ~~~~~ra~~Ns~A~~G~y~~~~e~~~~~~~~l~v~~~~y 363 (363)
T d1zaia1 321 KAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCSSSCCCCCCCCCCSCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999985468765850787776754455520067659
|
| >d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PEP carboxykinase-like superfamily: PEP carboxykinase-like family: PEP carboxykinase C-terminal domain domain: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27349.26 Aligned_cols=1 Identities=0% Similarity=-1.721 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 WLAEHMlIlgvt~P~g~~~yvaaAFPSaCGKTnlAMl~p~~pGwkv~~vGDDiawi~~~~dG~l~AiNPE~G~FGVapgt 80 (363)
T d1khba1 1 WLAEHMLVLGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGT 80 (363)
T ss_dssp CEEESCEEEEEECTTSCEEEEEEECCTTSCHHHHHTCCCCSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTC
T ss_pred CHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 92352343032489997799987567443421088718899996778941746777787889678536655753447898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~tnp~am~~l~~~~IFTNValt~DG~vwWeG~~~~~~~~~~~~~w~g~~~~~~~~~paaHpNsRFt~p~~qcp~id~~ 160 (363)
T d1khba1 81 SVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAA 160 (363)
T ss_dssp CTTTCHHHHHHTTBSCEEESCEEETTSCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTT
T ss_pred CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98889999997536852443567789974678898889877524678899888888997778875202137669866843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 wedP~GVpIsaiiFGGRr~~t~PlV~ea~~W~hGV~~GAtm~SE~TAAa~g~~g~vrrdPmAMlpF~gyn~gdY~~hWL~ 240 (363)
T d1khba1 161 WESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLS 240 (363)
T ss_dssp TTCTTCEEEEEEEEECCCSSSCCSEEECSSHHHHHHHHHTCEEEC--------CCEEECGGGCTTTCSSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHCCCCCEECCCHHHHHHCCCCHHHHHHHHHH
T ss_conf 35987514778997565688887248731466607873210104567764146864318066543328898999999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~g~~~~~k~PkIF~VNWFrKd~~GkFLWPGfGeN~RVLkWI~~Rv~G~~~A~eTPIG~vP~~~dLd~~GL~~~~~~el~~ 320 (363)
T d1khba1 241 MAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELFS 320 (363)
T ss_dssp GGGSTTCBCCEEEEECSCCBCTTSCBSSCCGGGGHHHHHHHHHHHTC--CEEEETTEEEECTTCSCCTTCCCCCHHHHTC
T ss_pred HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 51246567984799976534588886578863156999999998649755201676312683446866788666999838
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 vd~~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~~m 363 (363)
T d1khba1 321 ISKEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRISQM 363 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 7999999999999999998733305099999999999999649
|
| >d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glutaminase/Asparaginase superfamily: Glutaminase/Asparaginase family: Glutaminase/Asparaginase domain: Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27346.04 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~lPkI~ii~TGGTIa~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~~~~~~dS~~~~~~~~~ 80 (363)
T d1zq1a2 1 KPEVHFEALIEGKPGLPEVTIIGTGGTIASRIDYETGAVYPAFTAEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWV 80 (363)
T ss_dssp CCCCCCCSSCCCCTTCCEEEEEECSCCCCEEEETTTTEEEECCCHHHHHHHCGGGGGTSEEEEEECCCCCGGGCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCEEEEEEECCCCCHHCCHHHHH
T ss_conf 98644345688999999799997787314046687783378799999998575455125267999633896247999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~~~~kPVVlTGa~~P~~~~~sDg~~NL~~Al~~A~~~~~~v~v 160 (363)
T d1zq1a2 81 KIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATSEVAEVMV 160 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTSSBCSEEE
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999998632777737983587739999999999724899638996334135677751077899999998565666326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~i~~a~~v~K~~t~~~~aF~sp~~~pLg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pG 240 (363)
T d1zq1a2 161 VMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPG 240 (363)
T ss_dssp EEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECTTSCEEESCSCCCBCCCCCCEECCCCCCCEEEEECCTT
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 75200143145532131012345655444468776744899738879862454468887534554245785799993699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~l~~~~~~g~~GiVl~g~G~Gnvp~~~~~~l~~a~~~gi~VV~~Sqc~~G~v~~~~Y~~g~~l~~~GvI~~gdlt~ 320 (363)
T d1zq1a2 241 ISSEIIDFLVDKGYKGIVIEGTGLGHTPNDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLP 320 (363)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTBCCGGGHHHHHHHHHTTCEEEEEESSSBSCCCCSSSHHHHHHHHTTCEECTTCCH
T ss_pred CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEECCCCCH
T ss_conf 99999999985798369998555888856788999999747926999368787885777654437788699898899899
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 ekArikLm~lL~~~~~~~eI~~~f~~nl~GE~t~~~~~~~~~~ 363 (363)
T d1zq1a2 321 ETAYVKLMWVLGHTQNLEEVRKMMLTNYAGEITPYTRFDTYLR 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHSCSSTTSCSSCBTTCSCC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999859999999999971366853688766666569
|
| >d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Pentaerythritol tetranirate reductase species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=27344.86 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~e~LF~P~~ig~~~lkNRiv~apm~~~~a~~~g~~~~~~~~~yy~~ra~~Glii~e~~~V~~~~~~~~~~~~l~~d~~i~ 80 (363)
T d1vyra_ 1 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIA 80 (363)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHH
T ss_pred CCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCC
T ss_conf 95047983689989788738763468767798998989999999997086979981268885335799987437735503
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~ 160 (363)
T d1vyra_ 81 AWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVN 160 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 20033445652697046644126765454436787630101223555555344766664557877764566777999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~f~~AA~rA~~aGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~~g~d~i~~r~s~~~~~~ 240 (363)
T d1vyra_ 161 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 240 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
T ss_conf 99999999997513403451467103111446766566654464033444767888765553047887412311323311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~gg~~~~e~~~~~~~l~~~gvd~i~vs~~~~~~~~~~~~~~~~~~~~~~~~~vi~~G~~t~~~ae~~l~~G~~DlV~ 320 (363)
T d1vyra_ 241 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVA 320 (363)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCEEH
T ss_conf 10001330688999999877429806620347766786532888999898658539966899999999999879965115
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 ~gR~liadP~~~~K~~~g~~~~~~~~~~~~~~~~~~y~~y~~~ 363 (363)
T d1vyra_ 321 FGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL 363 (363)
T ss_dssp ESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCSCCC
T ss_pred HHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 5499987921999998389999998754237999985789898
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27344.75 Aligned_cols=1 Identities=0% Similarity=-0.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (363)
T d2c5aa1 1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 80 (363)
T ss_dssp CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHCC
T ss_conf 92231356737878987999788878999999999978298999968985211342356727993515589899876148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~ 160 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 160 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76731023322222222222222222221246777767751752202446654235554456554554346677689888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 161 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 78999999999999999984997899982157616876432222221100000113345543438998578874002778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~t 320 (363)
T d2c5aa1 241 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 320 (363)
T ss_dssp HHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999985788882797168765389999999998689875476899998641455889999986999788999999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
T d2c5aa1 321 YFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 363 (363)
T ss_dssp HHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 9999998876541454432145331110105312476233789
|
| >d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27343.96 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 M~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~e~i~~~dail~Gaig~P~ 80 (363)
T d1cnza_ 1 MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPK 80 (363)
T ss_dssp CCCCEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCC
T ss_conf 99986699989888559999999999999866619706999996428799974996889999999850413772257878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~~g~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~~~~~ 160 (363)
T d1cnza_ 81 WENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK 160 (363)
T ss_dssp GTTSCGGGSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECCGGGCE
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEE
T ss_conf 65543456644006799999738825777776125655323576554679842899874135433576531316885203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~t~~~~~ri~r~Af~~A~~r~~kVt~v~KaNv~k~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (363)
T d1cnza_ 161 AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQF 240 (363)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred ECCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCC
T ss_conf 32237764899999999999999966995689813753304487899999986228874975176658999986455777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~~lg~~~~A~ 320 (363)
T d1cnza_ 241 DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAAT 320 (363)
T ss_dssp SEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 66642357777678899887504542111034036407851677765334798864909999999999984189879999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 ~i~~Av~~~l~~g~~T~Dl~~~~~~~~T~e~~dai~~~l~~~~ 363 (363)
T d1cnza_ 321 AIEQAINRALEEGVRTGDLARGAAAVSTDEMGDIIARYVAEGV 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCGGGTTTTTCCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999769967564689974899999999999987019
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=0 Score=27342.84 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 p~~~~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G 80 (363)
T d1onha_ 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARG 80 (363)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC
T ss_conf 98979999999999999998389986999999999999995876006779889999978720559999999999998669
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~llg~i 160 (363)
T d1onha_ 81 EISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIGLFGAL 160 (363)
T ss_dssp SCCTTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHH
T ss_conf 62242021011100244434555065676530467544586455788999999987554148740231256410013555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ie~~tg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~~~~~~l 240 (363)
T d1onha_ 161 AVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAEEAHYAWGYRDGKAVRAVRVSPGMLDAQAYGVKTNVQDMANWVMANM 240 (363)
T ss_dssp HTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCCSSTTHHHHHCCEECHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 56404997004457888861696421446870014652136665974541011024445656614417999999999860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~G~ 320 (363)
T d1onha_ 241 APENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEANTVVEGSDSKVALAPLPVAEVNPPAPPVKASWVHKTGS 320 (363)
T ss_dssp CGGGCCSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCHHHHHHHHSHHHHTSCEECEEEEEEECCCSSEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 68877716788888775321045787566655020366655554445777542113444445677777778747972365
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
=
T Consensus 321 ~~G~~s~~~~~P~~~~~ivvl~N~~~~~~~~~~~a~~i~~al~ 363 (363)
T d1onha_ 321 TGGFGSYVAFIPEKQIGIVMLANTSYPNPARVEAAYHILEALQ 363 (363)
T ss_dssp CSSCEEEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7875299999977997999997489998899999999999639
|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Hypothetical protein YteR domain: Hypothetical protein YteR species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27342.72 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~a~~~~~~~~~~~~~p~~~W~W~~G~~~~gl~~lye~Tgd~~y~~~a~~~~~~~~~~~g~~~~~~~~~d~~ 80 (363)
T d1nc5a_ 1 KSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAI 80 (363)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTSSSTTCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGT
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 97579999999999973665348999982775649999999999883999999999999999844478745778987415
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~l~~ly~~Tgd~~y~~~a~~~~~~l~~~~~~~~g~~~~~~~~~~~~wiD~l~M~~p~l~~~~~~tgd~~y~d~a~~ 160 (363)
T d1nc5a_ 81 QAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 160 (363)
T ss_dssp GGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 88999999998728688999999999862137878878631367887773642067748999999998698789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~l~d~~~gL~~h~~~~~~~~~~~~~~~~~~~~~WsRGngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~ 240 (363)
T d1nc5a_ 161 QESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSI 240 (363)
T ss_dssp HHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999997515889986525455676677788888786501100019999879999867777800999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~q~~d~G~w~~~~d~p~~~~~~~etSata~~~y~l~~g~~~g~l~~~y~~~~~ka~~~l~~~~~~~~~~g~~~v~~~~ 320 (363)
T d1nc5a_ 241 CRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDIC 320 (363)
T ss_dssp HTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 84558878662310567777898633589999999999998758444999999999999999987403899874650357
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
=
T Consensus 321 ~g~~~~~~~~y~~~~~~~~~~~G~g~fllA~~e~~~l~~~~~~ 363 (363)
T d1nc5a_ 321 VGTSAGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK 363 (363)
T ss_dssp CSCCSCCHHHHHTSCEESSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899998200126787578757799999999999999984289
|
| >d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: CelA cellulase species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=0 Score=27341.65 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~qa~~~~~~~~~w~~~k~~~~~~~~~~~~~rv~d~~~~~~~t~SEGQgYGMl~Av~~~d~~~ 80 (363)
T d1kwfa_ 1 AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSQGMGYGLLLAVCFNEQAL 80 (363)
T ss_dssp CCSSCCCCCSSSCSCSSSCHHHHHHHHHHHHHHHHHHHEECTTSTTSCEECCCGGGTTCEEHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
T ss_conf 99887788888766778757899999999999999998066798872488717988987312789999999998499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Fd~l~~wt~~~l~~~~L~aW~~~~~~~~~~~~~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~Y~~~A~~ii~~i~~~~v 160 (363)
T d1kwfa_ 81 FDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCV 160 (363)
T ss_dssp HHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999974566888536778999877677888989768999999999999774874088999999999999998510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~v~~~s~~ll~~~~~~~~~tGL~pDw~~~~~~p~~~~~ 240 (363)
T d1kwfa_ 161 EHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQS 240 (363)
T ss_dssp CTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTTTSTTSCCCCSSBCTTSSCCTTSC
T ss_pred CCCCCEECCCCCCCCCCEECHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78984553676568988558032359999999963687338999999999999976405888888400046888588898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~ydA~Rvp~~ia~d~~~~g~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~G~~~~~~~~~~f~A~~~~~~~~~~~~~~ 320 (363)
T d1kwfa_ 241 YDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNF 320 (363)
T ss_dssp CSBSTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCGGGCCSCBCTTSCBCCCCCCTTTHHHHHHHHTTSSCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 87565599999999998750157145899999999998459888750481698446888979899999999873588589
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~~sG~~~~p~~~~ 363 (363)
T d1kwfa_ 321 AKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL 363 (363)
T ss_dssp HHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999987522467777887899999999999749989887679
|
| >d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes family: D-aminoacid aminotransferase-like PLP-dependent enzymes domain: Branched-chain aminoacid aminotransferase species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=0 Score=27339.76 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~ 80 (363)
T d2a1ha1 1 SSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80 (363)
T ss_dssp CCCCGGGCEECCCSSCCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCEEEECCCCEECCCHHHCCCCCEEEEEEEEEE
T ss_conf 97542115999767998898972237777755651799992288300887868412610720111304424353689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~g~i~lFrld~Hl~RL~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~ 160 (363)
T d2a1ha1 81 GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRAL 160 (363)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEE
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 79997899735788777888889757999876899999999998777526654465379997622677644566776662
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~dg~v~E~~~sN 240 (363)
T d2a1ha1 161 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMN 240 (363)
T ss_dssp EEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEE
T ss_conf 14897603456750013644689751011467545534214556422226888761489501100013451489616607
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 iF~v~~~kdG~~~l~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~ 320 (363)
T d2a1ha1 241 IFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320 (363)
T ss_dssp EEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEE
T ss_conf 99998358885799723654334674489999999997399820664779999996765599618998478858999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------9
Q 003615 112 ------------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------------C 112 (807)
-
T Consensus 321 I~~~~~~~~i~~g~~g~~it~~L~~~l~~iq~G~~~~~W~~~v 363 (363)
T d2a1ha1 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV 363 (363)
T ss_dssp EEETTEEEECTTGGGTTHHHHHHHHHHHHHHTTSSCCTTEEEC
T ss_pred EEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 9867964893899808899999999999976788899973579
|
| >d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Sulfolobus fructose-1,6-bisphosphatase-like superfamily: Sulfolobus fructose-1,6-bisphosphatase-like family: Sulfolobus fructose-1,6-bisphosphatase-like domain: ST0318 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27277.42 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~TvSvIKADVGg~~GHt~~hp~ll~~a~~~l~~a~~~glliD~~v~~~GDDi~limTH~~G~d~~eiH~lAW~aF~~~t 80 (362)
T d1umga_ 1 KTTISVIKADIGSLAGHHIVHPDTMAAANKVLASAKEQGIILDYYITHVGDDLQLIMTHTRGELDTKVHETAWNAFKEAA 80 (362)
T ss_dssp CEEEEEEEECCCBBTTTTBCCHHHHHHHHHHHHHHHHTTSCSEEEEEEETTEEEEEEEESSCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 94699997236787777768989999999999861138868877667643742578754689894899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~vAK~l~LYGAGQDLL~DaFSGNvkGmGPgvAEmEf~ERpsEp~~vF~aDKTePGAfNlPlY~~FaDPfnt~GLvidp~m 160 (362)
T d1umga_ 81 KVAKDLGLYAAGQDLLSDSFSGNVRGLGPGVAEMEIEERASEPIAIFMADKTEPGAYNLPLYKMFADPFNTPGLVIDPTM 160 (362)
T ss_dssp HHHHHTTCBTTTTTTCTTSSSSSCCCCCCEEEEEEECCCSSCEEEEEEEESBCGGGGHHHHHHHHHCTTTCTHHHHCGGG
T ss_pred HHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCC
T ss_conf 99887256556621211346765257787437887225789857999853888760120689984284578750317101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 h~Gf~FeV~Dv~~~k~i~l~~Pee~Ydllalig~~~RyvI~~V~~k~~~eiaav~St~RL~~iAG~YvGKDDPV~iVR~Q 240 (362)
T d1umga_ 161 HGGFKFEVLDVYQGEAVMLSAPQEIYDLLALIGTPARYVIRRVYRNEDNLLAAVVSIERLNLIAGKYVGKDDPVMIVRLQ 240 (362)
T ss_dssp TTCEEEEEEETTTTEEEEEETTTTHHHHHHHHTSTTTEEEEEEEETTTCCEEEEECCCCCBCC---CBCCCSCEEEEECS
T ss_pred CCCEEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCEECCCCCCEEEEEEC
T ss_conf 36705899970257178851806877899983898735899998668997789976678776406120688866999846
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~gfPA~gEvlepFa~phlVaGwmRGSH~gPlMPV~~~da~~trFdgpPrV~alGFql~~GkL~GP~DlFddpafD~~R~~ 320 (362)
T d1umga_ 241 HGLPALGEALEAFAFPHLVPGWMRGSHYGPLMPVSQRDAKATRFDGPPRLLGLGFNVKNGRLVGPTDLFDDPAFDETRRL 320 (362)
T ss_dssp SSSCCHHHHHHTTSSCCEEEETGGGCEEEECEEECSTTCSCCGGGCSCEEEEEEEEEETTEEEEEEESSCSGGGHHHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCCHHHHHHH
T ss_conf 88996465542244652114434566678743201456887567899768888888627887376324577430689999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 a~~~A~~mR~~Gpf~PhrLp~~emEYttlp~vl~kL~~rf~~ 362 (362)
T d1umga_ 321 ANIVADYMRRHGPFMPHRLEPTEMEYTTLPLILEKLKDRFKK 362 (362)
T ss_dssp HHHHHHHHHTTTTCTTTBCCGGGCSSCCHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 999999998549987655897880211388999999887519
|
| >d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Release factor superfamily: Release factor family: Release factor domain: Polypeptide chain release factor 2 (RF2) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27276.02 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~eL 80 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGL 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91689999999999999997769798999999999986397144499999999999999999999999999999988877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Ela~ee~deel~~e~~~~l~~l~~~l~~le~~ll~~~~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~r~ae~~gwk~ 160 (362)
T d1gqea_ 81 LELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKT 160 (362)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 87764110588888899999998622467787521367545454379998257606688999999999999999759858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 eiid~~~~e~gG~K~v~~~I~G~~ayg~Lk~EsGvHRvqRvp~~es~gr~hTS~a~V~v~P~~~~~~~~~i~~~dl~i~~ 240 (362)
T d1gqea_ 161 EIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 240 (362)
T ss_dssp EEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEE
T ss_pred EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEECCHHHEEEEE
T ss_conf 99414567766546999999776688999872375048884046777347998778899624787631111767827997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~rs~g~GGQ~vN~t~savri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~i 320 (362)
T d1gqea_ 241 YRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWGSQI 320 (362)
T ss_dssp ECCCCSSCCSTTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCCSCSEE
T ss_pred EECCCCCCCCHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 52699886512033141688744733677764221014789999999999999999999999999887423127576984
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 RtY~~~~~rv~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 362 (362)
T d1gqea_ 321 RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 362 (362)
T ss_dssp EEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
T ss_conf 676589981500053972578468758877999999987779
|
| >d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27273.22 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~r~l~~~g~~~~~~~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al~ 80 (362)
T d1umda_ 1 HRFETFTEEPIRLIGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIR 80 (362)
T ss_dssp CCCCSSCSSCBCCBCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCC
T ss_conf 99877886764777899989987899979999999999999999999999999977996022278978999999999758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~D~~~~~yR~h~~~la~G~~~~~~~ae~~gk~~g~~~Grggs~H~~~~~~~~~~~~~ivg~~~p~a~G~A~a~k~~~~ 160 (362)
T d1umda_ 81 PGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRT 160 (362)
T ss_dssp TTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 78786873134189999987439999999845568986543542124212367444444223230077777876530344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~~~vDGnDv~~v~~ 240 (362)
T d1umda_ 161 GQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYY 240 (362)
T ss_dssp CCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHH
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHH
T ss_conf 42356522688656773499997764336870366520366644321011145344422232100026744505889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~~~DPi~~~~~~L~~~g~~se~e~~~i~~ei~~~ 320 (362)
T d1umda_ 241 VVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAE 320 (362)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999985689789971334335787655202220014667773299899999999987999999999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 V~~a~~~A~~~p~P~~~~l~~~VY~~~~~~l~~q~~~~~~~~ 362 (362)
T d1umda_ 321 LERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 362 (362)
T ss_dssp HHHHHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999998679989899971315799963999999999559
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=100.00 E-value=0 Score=27270.22 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~ 80 (362)
T d2pl5a1 1 GSIGIIETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKS 80 (362)
T ss_dssp CCCCBCCCEEEEESCEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSS
T ss_pred CCCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 97673666688518756689887689569999630338889988998788776321155677667883358884599976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~ 160 (362)
T d2pl5a1 81 FDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSI 160 (362)
T ss_dssp EETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
T ss_conf 47553579962335676666675420012345557677520168899999999997186726777403577889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~ 240 (362)
T d2pl5a1 161 AYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPR 240 (362)
T ss_dssp HSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCS
T ss_pred HCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 48367664001346533677799999999999844974236875667836799999999999870926666563333444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~ 320 (362)
T d2pl5a1 241 GNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVK 320 (362)
T ss_dssp SCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 55442067799999998988874078778999986311146333225999996189988999857552759999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 ~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~p~ 362 (362)
T d2pl5a1 321 SLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENPN 362 (362)
T ss_dssp HHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCCC
T ss_pred HHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCCC
T ss_conf 997579976999948999742105488999999999973999
|
| >d1nqka_ c.1.16.4 (A:) Alkanesulfonate monooxygenase SsuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Ssud-like monoxygenases domain: Alkanesulfonate monooxygenase SsuD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27268.09 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~AE~lGfd~~w~~eh~~~~dp~~~la~la~~T~rI~lgt~V~~ 80 (362)
T d1nqka_ 1 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRP 80 (362)
T ss_dssp CCBEEEEECCTTCEESSTTSSTTEECCCHHHHHHHHHHHHHHTCSEEEECCSTTSCCHHHHHHTTSTTCSSCEEEEEECT
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
T ss_conf 92479997456899887888888788999999999999998499999968888888899999999997490699999739
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~P~~~A~~~AtLd~lS~GR~~lGlG~G~~~~e~~~~g~~~~~~~~~~~~~E~~~ilr~l~~~e~v~~~G~~~~~~~~ 160 (362)
T d1nqka_ 81 SVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA 160 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHTCCCCTTHHHHHHHHHHHHHHHHTTTCCEEEECSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 98986999999999999749985268863666888852122220245566678989999875025664554124652587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~p~~~p~ppi~~a~~~p~~~~~Aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d1nqka_ 161 KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW 240 (362)
T ss_dssp CCSSCCSSSSSSCEEEECSSHHHHHHHHHHCSEEEEECCCHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEEEESSHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHH
T ss_conf 54234478997016874265789998874265512458999999999999999999709975242343699944689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~V~e~L~~~~ 320 (362)
T d1nqka_ 241 QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYA 320 (362)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHSCC-----------------CTTEEETTEEGGGGSSSSSCSCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
T ss_conf 98765665430889999986542012100466776530340144433467767777506888708858999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 ~~G~d~~~l~~~~~~~~l~~f~eeV~P~l~~~~~~~~~~~~~ 362 (362)
T d1nqka_ 321 ALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIPEIPQPQPL 362 (362)
T ss_dssp TTTCCEEEEECSSHHHHHHHHHHHTGGGSCBCCCCCCCCCCC
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 729998999489998999999998999870135067899998
|
| >d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27268.08 Aligned_cols=1 Identities=0% Similarity=0.070 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~e~~~~~~G~~~~~~~G~~lp~et~e~~~~~dail~Gai 80 (362)
T d1vlca_ 1 KIHHHHHHMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSV 80 (362)
T ss_dssp CCCCCCSEEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 97768985799998988667999999999999998762997899998457899997789787899999999789871577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~p~~~~~~~~~~~~~~~~~~lR~~ldlyanvRP~r~~~~~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~ 160 (362)
T d1vlca_ 81 GGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEK 160 (362)
T ss_dssp CCGGGTTSCSTTSHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 79986543213477665578899974433220026753034566666555667772379850124675557777788856
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~t~~~~~Riar~Af~~A~~~~k~Vt~v~K~Nv~~~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (362)
T d1vlca_ 161 GFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQF 240 (362)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCC
T ss_conf 99989943478789999999998618980799943775201589999999999667986999730989999998665777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~~fE~~HGSApdiaGk~iaNP~a~ils~ammL~~~lg~~~~A~~i 320 (362)
T d1vlca_ 241 DVILTTNMFGDILSDESAALPGSLGLLPSASFGDKNLYEPAGGSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKI 320 (362)
T ss_dssp SEEEECHHHHHHHHHHHTTSSSCGGGCEEEEESSSEEEEESSCCCTTTTTTTCSCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 58985306666777899998513332101210422323125686201058986480999999999987346986999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 ~~Av~~~l~~G~~T~Dlg~~~~~~~~T~e~~dav~~~l~~l~ 362 (362)
T d1vlca_ 321 ERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLEEIW 362 (362)
T ss_dssp HHHHHHHHHTTCCCGGGCSSGGGCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999999998599570004699997769999999999999759
|
| >d3thia_ c.94.1.1 (A:) Thiaminase I {Paenibacillus thiaminolyticus [TaxId: 49283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Thiaminase I species: Paenibacillus thiaminolyticus [TaxId: 49283]
Probab=100.00 E-value=0 Score=27267.80 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~tl~~~~~~~~p~~~~~~~~~~~~F~~~~P~V~v~~~~~~~~~~~~~~~pDv~~~~~~~~~~~~~~g~l~~L~~~~~~~~ 80 (362)
T d3thia_ 1 ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQA 80 (362)
T ss_dssp CEEEEECCSCSSCHHHHHHHHHHHHHHHCTTSEEEECCCCTTTCCCCTTCCEEEEEGGGHHHHHHTTCEECBCGGGCTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf 98999966788867999999999999988193899996652544489989699989088999998898233871011110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~dG~~y~vP~~~~~~~~~ynkd~~~~aG~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (362)
T d3thia_ 81 EDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASM 160 (362)
T ss_dssp GGBCHHHHHHTEETTEECCEEEEEECEEEEEETTCHHHHTCCBHHHHHHHHCCCCCCCSSCCEEEEEEECCCSHHHHHHH
T ss_pred CHHHHHHHHCEEECCEEEEEEEECCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
T ss_conf 01113344311569979997651210799961468997389999973789999999751257887246305877526889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~ 240 (362)
T d3thia_ 161 YLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGD 240 (362)
T ss_dssp HHHHHHHHHTCCCCCSSCCCSSSCCHHHHHHHHHHHHHHCHHHHHCCCTTCCTTHHHHHHHHTBEEEEEEETTHHHHHGG
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHHHHHHHH
T ss_conf 99999861885113677633443679999999999997304775334466770122111005818999916587655543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~P~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~fl~s~e~~~~~~~~~g~~~~~~~~~pa~~~~~e~~~~ 320 (362)
T d3thia_ 241 YAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQ 320 (362)
T ss_dssp GGGTEEEECCBSCSSCCCCEEEEEEEEEETTCSCHHHHHHHHHHHHSHHHHHHHHSCCSTTCCCCCCEESBHHHHHHHTT
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 06766546415787789875450231101676479999999999719999999998468876742445057999863310
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~e~lg 362 (362)
T d3thia_ 321 DYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG 362 (362)
T ss_dssp TCTHHHHHHHHHTCTTCEECCCCTTHHHHHHHHTTTHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 398699999999987688761799999999999999998609
|
| >d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Tritrichomonas foetus [TaxId: 5724]
Probab=100.00 E-value=0 Score=27267.74 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~e~~ltFdDVlLvP~~Sti~s~r~dVdl~~~l~~~~~~~~~~i~l~iPIIsAnMDTVt~~~mA~~la~~Gglgvih 80 (362)
T d1pvna1 1 AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIF 80 (362)
T ss_dssp CEECSSCBCCGGGEEECCCCBCTTCCGGGCBCCEECSCEETTSCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 95456788785566983798767777101360268774024556663569847846888768999999999888977995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 R~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ag~d~i~IDvAhG~~~~v~~~i~~ir~~~~~~~~IiAGNV 160 (362)
T d1pvna1 81 GSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNI 160 (362)
T ss_dssp CSSCHHHHHHHHHHHHTCCCCCEEEECSSSHHHHHHHHHHHTCSEEEECCSCCCBHHHHHHHHHHHHHHGGGSCEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 05999999998642332023221211013567777777641854775300001015788999999886533103421244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 aT~e~~~~L~~aGaD~vkVGIG~Gs~CTTr~~tGvG~Pq~sAv~e~a~~~~~~~~~~~~~v~iiaDGGi~~~gdi~KAla 240 (362)
T d1pvna1 161 VDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA 240 (362)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHTCBCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEE
T ss_conf 67889999997297579844303434343655503771677999999999875332036875353323474662357888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~GAd~VM~G~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~l~g 320 (362)
T d1pvna1 241 MGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLN 320 (362)
T ss_dssp TTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSTTTCCGGGGCSSSCSSCSSCCBCEEEEECCBCHHHHHHHHHH
T ss_pred EECCCEEEHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 71340021115405565577310103513666622531213322212446521036899737996268777889999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 glrs~~~y~G~~~l~~~~~~~~f~~~t~~~~~E~~~H~~~~~ 362 (362)
T d1pvna1 321 KVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAHDVIVK 362 (362)
T ss_dssp HHHHHHHHTTCSBHHHHHHHCEEEEBCHHHHHHHSCCSSEEC
T ss_pred HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEC
T ss_conf 999987532767599997488999988210211568826739
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Probab=100.00 E-value=0 Score=27267.50 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (362)
T d1v8ka_ 1 PNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQ 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHTCCTTTTTCTTSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCE
T ss_conf 96689999999986413489877888888888999980899968863799469998899189981886444655676860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~f~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~ 160 (362)
T d1v8ka_ 81 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ 160 (362)
T ss_dssp EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHC
T ss_conf 67678661999998999999999999998741681388632578888603330577876555687133115567777630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~S 240 (362)
T d1v8ka_ 161 PRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNS 240 (362)
T ss_dssp HHHHTTCCEEEEEEEEEETTEEEETTTTTEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CC
T ss_pred CCCCCCCHHHEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 12346323311021463277487634577544322124577465898899946889989987414545430245674567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 SRSH~i~~i~i~~~~~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~l 320 (362)
T d1v8ka_ 241 SRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQV 320 (362)
T ss_dssp CSSEEEEEEEEESSSSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 51005799999855600136765202566554444453156553332211107789999999856999688746888886
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 LkdsllGgns~t~~i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 321 LRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp TTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 133047998619999996987010899999999999974379
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27266.92 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~i~~~~~~~~~~g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 1 SDLNNAIQGILDDHVARGVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp CHHHHHHHHHHHHHHTTTCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95789999999999775997289999999999999857882056698799998697115689999999999997699877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 dd~v~~ylp~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~llg~ii 160 (362)
T d2drwa1 81 DEPITRWFPDLPKAAQMPVRILLNHRSGLPDFETSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYVLAGMII 160 (362)
T ss_dssp TSBGGGTCTTSTTGGGCBGGGGTTTCSCCCCCTTTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCHH
T ss_conf 76664420354434332335555326899764332223332321026777766406766532201102454311043022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 e~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d2drwa1 161 AHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTEWFPLSGANA 240 (362)
T ss_dssp HHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTCCCCBTTEEECTTTSCHHHHGG
T ss_pred HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32057526666678888502876523357311454533310211556555643233345676566334621134445566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 aGgl~sta~Dla~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~~~yG~G~~~~~~~~~~~~gH~G~~~G~~s~~~~~ 320 (362)
T d2drwa1 241 AGDMVSTPRDIVKFLNALFDGRILDQKRLWEMKDNIKPAFFPGSNTVANGHGLLLMRYGSSELKGHLGQIPGHTSIMGRD 320 (362)
T ss_dssp GTCEEECHHHHHHHHHHHHTTSSSCHHHHHHHHTSCEECCCTTSCEEEECSSCEEEEETTEEEEEEEEEETTEEEEEEEC
T ss_pred CCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEE
T ss_conf 57527189999999999847997899999999974256535799888704369998459941898246578823999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 p~~~~~iv~l~N~~~~~~~~~~~~~~~~~~~~il~ai~~~~~ 362 (362)
T d2drwa1 321 EETGAALMLIQNSGAGDFESFYLKGVNEPVDRVLEAIKNSRS 362 (362)
T ss_dssp TTTCCEEEEEESEECSSTTSHHHHTTHHHHHHHHHHHHHHTC
T ss_pred ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 879989999994999556899999999999999999975649
|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: Papillomavirus large T antigen helicase domain species: Simian virus 40 [TaxId: 10633]
Probab=100.00 E-value=0 Score=27266.15 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~q~~~~~l~e~a~~~~~~d~~lll~~y~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~nA~~fl~~~~Q~k~~k~~~~~v~ 80 (362)
T d1svma_ 1 KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL 80 (362)
T ss_dssp CCCCHHHHHHHHHHTTCCCHHHHHHHHHGGGSCSTTCHHHHTTCCHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97428888988987589739999999998712518889999877789999999860669999873106899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~kr~~~~~ms~~e~i~~~~~~~~~~~p~~~~~~~~~d~~~~~~il~~l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 160 (362)
T d1svma_ 81 AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK 160 (362)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTSTTCCCCHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 99997312699899999999999853863334544467888999999998644325899999999998289976769998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~~~dg~~ 240 (362)
T d1svma_ 161 GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV 240 (362)
T ss_dssp CSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHHHHHCSS
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCC
T ss_conf 99998889999999998599789997742011888875777799899999876541068997288750731134568860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~p~i~ttN~~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~~~~~~L~~li~~~s~ 320 (362)
T d1svma_ 241 KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV 320 (362)
T ss_dssp CEEECCSSSCCEEECCCCEEEEECSCCCCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTTCHHHHHHHHHHHSCG
T ss_pred HHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCH
T ss_conf 13444210024553167724650654300122466736886268974789999999984035788888999987368987
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 ~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk~ile 362 (362)
T d1svma_ 321 AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGVLD 362 (362)
T ss_dssp GGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999987524149999999999976997779
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27265.38 Aligned_cols=1 Identities=0% Similarity=-2.088 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 f~~RG~mlD~aR~~~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA 80 (362)
T d2gjxa1 1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA 80 (362)
T ss_dssp CSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98558677638888089999999999998299389999874787600147873144337868878863899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~rgI~vIPEiD~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lF~~~~iHiGgDE~~~ 160 (362)
T d2gjxa1 81 RLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDF 160 (362)
T ss_dssp HHTTCEEEEECCCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCS
T ss_pred HHCCCEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 97598798536665046899874833137665788877755665777377899899999999885146537740540124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~w~~~p~~~~~~~~~g~~~~~~~l~~~f~~~~~~~l~~~gk~~i~W~d~~~~~~~l~~d~ii~~W~~~~~~~~~~~~~~ 240 (362)
T d2gjxa1 161 TCWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELEL 240 (362)
T ss_dssp HHHHHCHHHHHHHHHHTCTTCSHHHHHHHHHHHHHHHHTTTCEEEEEHHHHHTTCCCCTTCEEEECCSSSSSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 43336878899998617788999999999999999999739706744410256777899872564314543668989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~G~~~i~s~~~yl~~~~~g~~w~~~y~~~p~~~~~~~~~~~~ilG~e~~lW~E~i~~~~l~~~~~PRl~A~AE~~Ws 320 (362)
T d2gjxa1 241 VTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWS 320 (362)
T ss_dssp HHHTTCEEEECTTCCTTSCBSSCTHHHHHHCCTTCSSCCHHHHTTEEEEEEEECTTSCSTTTHHHHHTTHHHHHHHHHHS
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 97579859981674256567777656545531036766865650550347770107778510688899799999999859
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~d~~~f~~Rl~~~~~rL~~~Gi~~~p~~~~~c~~~~~~ 362 (362)
T d2gjxa1 321 NKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQ 362 (362)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHTTCCCCCSSSCCCSSCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
T ss_conf 987889999999999999999977998769998645420329
|
| >d1qjwa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Trichoderma reesei, Cel6a [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Trichoderma reesei, Cel6a [TaxId: 51453]
Probab=100.00 E-value=0 Score=27265.13 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~gNPf~g~~~yvnP~y~a~v~~~a~~~~~~~~~~~~~~ia~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (362)
T d1qjwa_ 1 ATYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQ 80 (362)
T ss_dssp CCCSSCTTTTSEECCCHHHHHHHHHHTGGGCCHHHHHHHHHHTTSCCCEEECSGGGHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 97678998897331473058899998751368788999999846780698237788740689999999998726887228
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 lV~Y~iP~RDC~a~ss~G~~~~~~~g~~~Yk~Yid~Ia~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~~~~~ 160 (362)
T d1qjwa_ 81 FVVFDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQIVVEYSDIRTLLVIEPDSLANLVTNLGTPKCANAQSAYLEC 160 (362)
T ss_dssp EEECCCTTCSTTCSTTCCSCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECSSSHHHHHHCTTSHHHHTTHHHHHHH
T ss_pred EEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99936999971444249986656554688999999999999856897439997776066654057844457789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~yAv~~L~~pnv~vYlDaGhsgWlgw~~n~~~~a~~~a~~l~~ag~~~~~rGFatNVSNy~~~~~~~~~~~t~~n~~~~ 240 (362)
T d1qjwa_ 161 INYAVTQLNLPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYN 240 (362)
T ss_dssp HHHHHHHTCCTTEEEEEECCCTTTTCSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTSCCCSSCSSCCGGGTTCSCCS
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999970899748999788776678743214789999999984667542327898556887766677765445675514
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 e~~Y~~~l~~~l~~~G~~~~~fVIDTsRNG~gp~~~~~~g~WCNp~G~glG~~Pt~~t~~~~vDA~lWIK~PGESDG~~~ 320 (362)
T d1qjwa_ 241 EKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGDSLLDSFVWVKPGGECDGTSD 320 (362)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 89999999999985368899989857888999988767888879999847899988999876016898578826777888
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~D~~c~~~~a~~~aP~AG~Wf~~~f~~Lv~nA~P~~~ 362 (362)
T d1qjwa_ 321 SSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANPSFL 362 (362)
T ss_dssp TTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 888777766676567899897777479999999972689779
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27265.00 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~ 80 (362)
T d1q8ya_ 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 80 (362)
T ss_dssp CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 97888888844785799899750778189999999999799999983431336899999999998401455555422767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~ 160 (362)
T d1q8ya_ 81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 160 (362)
T ss_dssp TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE
T ss_conf 64789987631256520234320003542000001223467868999999999999988876405864656770570563
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 161 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 05765644305675314421234454223665210571321466777643201237899999878899898755432102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 68999999983799878862453220001320122024323577644421000156743589999999998779945790
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------9
Q 003615 112 -----------------------------------------C 112 (807)
Q Consensus 112 -----------------------------------------C 112 (807)
=
T Consensus 321 ta~e~L~Hp~f~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 362 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWFEEVR 362 (362)
T ss_dssp CHHHHHTCGGGTTCTTCTTCCCTTSCTTCBSTTSTTSSSCCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 899996693407898744477998666788899984354409
|
| >d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: E1-beta subunit of pyruvate dehydrogenase (PP module) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27195.93 Aligned_cols=1 Identities=0% Similarity=-1.258 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~lske~ll~~yr~M~~~R~~e~~~~~l~~~g~i~g~~h~~~GqEa~~vg~~~~l~ 80 (361)
T d2ozla1 1 FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 80 (361)
T ss_dssp CCSEEEEECCCCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 98876565353302015779988788899999999999999999999999999779875065687877999999998679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~D~~~~~yR~~~~~la~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~~~~~~~~~ivg~~~p~A~G~A~a~k~~~~~~v 160 (361)
T d2ozla1 81 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEV 160 (361)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBTTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCEECCCCCCHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 55785144444210223104610223312687565566554400123466667645445655157899997654058976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~yaist~~~~~~~~~~~~~~~~~~~~~~vdGnD~~av~~a~~~A 240 (361)
T d2ozla1 161 CLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFA 240 (361)
T ss_dssp EEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 99972688766763236555554326765899986786667770110354220001365415996267705799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~R~g~gP~liE~~TyR~~gHs~~D~~~~YR~~~Ei~~~~~k~DPi~~~~~~Li~~g~~se~e~~~i~~ei~~~V~~A 320 (361)
T d2ozla1 241 AAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDA 320 (361)
T ss_dssp HHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99986069888999865568887666652124777888744413899999999999879999999999999999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
.
T Consensus 321 ~~~A~~sp~P~~~~l~~~VYa~~~p~~~~~~~~~~~~~~~~ 361 (361)
T d2ozla1 321 AQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFKSVS 361 (361)
T ss_dssp HHHHHHSCCCCGGGTTCSSSSSCCCEEEECSBTTCEEEECC
T ss_pred HHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 99998588969899973216899807877689996116789
|
| >d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Deoxyhypusine synthase, DHS domain: Deoxyhypusine synthase, DHS species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27194.04 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~p~~a~~~v~~~s~~~p~~~~~V~g~df~~~~~~~~ll~~~~~~GFqA~~Lg~A~~i~~~Mi~~~~~~~~~~~~~~~~~~ 80 (361)
T d1dhsa_ 1 APAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLT 80 (361)
T ss_dssp CCHHHHHHHSCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC-----------
T ss_pred CCHHHHHCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 95045424341678899999744178778998999999999873930788999999999998752257765422222234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f~~dd~~Lr~~ginRIgd 160 (361)
T d1dhsa_ 81 QSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGN 160 (361)
T ss_dssp ------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTEEEETT
T ss_pred CHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 00125666438986144411465799999999859977898068850399999808641076568848876437651220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 v~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~~Sil~~A~~~~vPVf~Pa~~DssiG~~l~~~ 240 (361)
T d1dhsa_ 161 LLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFH 240 (361)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
T ss_conf 63177999999999999999999985404776464999999974268952499999982997654776516699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~iD~~~D~~~l~~~~~~~~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavqItta~~~dGslSGA~p~EaiSWG 320 (361)
T d1dhsa_ 241 SYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWG 320 (361)
T ss_dssp HHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCTHHHHHHHHHHHTTTSBSEEEEECCCCSTTCCSTTCCHHHHHHHT
T ss_pred HHCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 96189953559999999999987466762699959826378776455317998799970799986766689833013057
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
-
T Consensus 321 Ki~~~a~~v~V~~DATIv~PLl~a~~~~k~~~~~~~~~~~~ 361 (361)
T d1dhsa_ 321 KIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHEKNED 361 (361)
T ss_dssp SBCTTCCCEEECSCHHHHHHHHHHHTGGGGHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 61789883799960779999999999975401124322489
|
| >d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Xanthan lyase species: Bacillus sp. gl1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=27193.90 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 sdd~~~lr~rw~~~l~g~~~~d~~d~~~~~~l~~l~~~A~~~~~~~~~~~~~~~lW~~l~~~~~~~~l~~~~~rl~~mA~ 80 (361)
T d1x1ia1 1 SDEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMAL 80 (361)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSSGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 91899999999999708876786768999999999999997787458887766767888766630479999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Ay~~pgs~ly~d~~l~~~I~~al~~~~~~~y~~~~~~~~~NWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (361)
T d1x1ia1 81 AATTVGSSLYGNADLKEDILDALDWLYVNSYNSTRSRSAYNWWHWQLGIPMSLNDIAVLLYDDISAARMATYMDTIDYFT 160 (361)
T ss_dssp HHHSTTCTTTTCHHHHHHHHHHHHHHHHHTSSTTSCTTSSSHHHHHTHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 98299985538999999999999999971888888998999125551757999999998514169999999998999857
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 p~~~~TGaN~~d~a~~~~~rglL~~d~~~~~~a~~~i~~~~~~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG~~~l~~~~~ 240 (361)
T d1x1ia1 161 PSIGLTGAARAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTAN 240 (361)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSTTSSSCCSSSSEECTTSCEEETTTEECTTTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCEECCCCEECCCCEECCCCCHHHHHHHHHH
T ss_conf 89886530788789999999998469999999999976401305526888651478634257710167533999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~~~~~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~ 320 (361)
T d1x1ia1 241 LMYLLSGSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFK 320 (361)
T ss_dssp HHHHHTTSTTCCCCGGGGHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHTTTCCTTHHHHHH
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99997799887887899999999996002574377016657764014788654457999999999987229999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
.
T Consensus 321 ~~~k~~~~~d~~~~~~~~~~~~~~~~~~~ll~d~~i~~~~~ 361 (361)
T d1x1ia1 321 QIAKRVIQEDTFSSFYGDVSTDTIRLAKAIVDDPSIAPAAA 361 (361)
T ss_dssp HHHHHHHHHCCSSCGGGGSCHHHHHHHHHHHTCTTCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999986076654235887889999999856898897879
|
| >d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 2-aminoethylphosphonate transaminase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27192.95 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~l~~pGP~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~ 80 (361)
T d1m32a_ 1 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVL 80 (361)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 95036999877799999851544698868999999999999999829899988999889789999999998654224653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~ 160 (361)
T d1m32a_ 81 IVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTY 160 (361)
T ss_dssp EEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEE
T ss_pred EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 01101223457777655301233222234678640256899874247662699843002342011234442211452146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (361)
T d1m32a_ 161 IVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 240 (361)
T ss_dssp EEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 75200256745532233445268763034533799866789625554100024566432200111011234566678777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~g 320 (361)
T d1m32a_ 241 THTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
T ss_conf 10446899999999985003566788899887777777622875467856649967999899988779999999999889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
.
T Consensus 321 i~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L~~~ 361 (361)
T d1m32a_ 321 FVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 361 (361)
T ss_dssp EECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 28978986889989984788899999999999999975999
|
| >d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=100.00 E-value=0 Score=27192.26 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ 80 (361)
T d2c0ra1 1 SERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF 80 (361)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 99873357988188899999999987632146865434576898999999999999999968999878999788725999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~tg~~~~~~~i~~ 160 (361)
T d2c0ra1 81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKA 160 (361)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEECCEEEE
T ss_conf 99985255689823898404111125555430374012102343333415555542046761489972464125115777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d2c0ra1 161 FPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPP 240 (361)
T ss_dssp CCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30468841899860333320234334325897413345245673799876876627443223324120003331014664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~G 320 (361)
T d2c0ra1 241 SFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred CEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20230115677766502424777789999998756665404654345777431454399997898546999999999788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
=
T Consensus 321 I~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~~ 361 (361)
T d2c0ra1 321 FVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG 361 (361)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88736988678698870688999999999999999999659
|
| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Methionyl-tRNA synthetase (MetRS) species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27190.39 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~v~~~~P~p~G~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~g~~i~~~A~~~g~~~~~~~~~~~~~~~~ 80 (361)
T d1rqga2 1 MVRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKI 80 (361)
T ss_dssp CCEEEEEECCCBTTSCCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 96599944898889873456445629999999999981599267158537650999999998299999999999986000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~~~~~ 160 (361)
T d1rqga2 81 TFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFAICGRPISFRDSAHYYIKMQDF 160 (361)
T ss_dssp HHHHHTCCCSEEEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEBTTTTBCCCGGGTTTCCBCEEEEEEEEEECGGGT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCHH
T ss_conf 00001222233544566002344553443101368533124664100022011033213589954310263478750113
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~d~~isr~~~wg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (361)
T d1rqga2 161 AERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKP 240 (361)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHTTCCCCEECEECCSSSCBCSCCCSSSTTCEECHHHHGGGHHHHHHHHHHHHTTCT
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 54432101335433210345542002023333333346435667654346788278750345546564566676667733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~G~KMSKSlGN~I~~ 320 (361)
T d1rqga2 241 NEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWV 320 (361)
T ss_dssp TTTHHHHBCSSCCEEEEEEEEGGGHHHHHTHHHHHHHTTCCBCSSSCCBCBCCCSBCCEECCEEETTEECBTTTTBSCBH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCH
T ss_conf 57777654016886348734655533100148999998632565542014778978897023975898668779988788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
-
T Consensus 321 ~d~i~~yg~D~lR~~l~~~~p~~~d~dfs~~~~~~~~n~~~ 361 (361)
T d1rqga2 321 HEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEEL 361 (361)
T ss_dssp HHHTTTSCHHHHHHHHHHTCCSSSCEEECHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99998868089999999608888999889999999864589
|
| >d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Homocysteine S-methyltransferase family: Homocysteine S-methyltransferase domain: Betaine-homocysteine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27188.63 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~llerL~~~~ililDGgmGteL~~rG~~~~~~Ws~~~~l~~Pe~V~~iH~~yi~AGAdiI~TNTy~a~~~~l~~~g~~~ 80 (361)
T d1lt7a_ 1 KGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYV 80 (361)
T ss_dssp CCHHHHHHTTCCEECCTTHHHHHHHHTC-------------CHHHHHHHHHHHHHHTCSEEEEEC---------------
T ss_pred CHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCHHH
T ss_conf 95889862699799978889999977999899988688852959999999999996799998278857879998613266
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~aa~~~a~~~~~~~~~~VaGsigp~~~~~~~~~~~~~~~~~~~q~~~l~~~gvD~il~ETm~~~~Ea~~a 160 (361)
T d1lt7a_ 81 LEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWA 160 (361)
T ss_dssp --------CHHHHHHHHHHHHHTTTCEEEEEECCCHHHHTTCCHHHHHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 78899999999999998510244321010256678631121104788999999899887504322336777568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~a~~~~~~Pv~~s~t~~~~g~l~~g~~~e~~~~~~~~~~~~~g~nc~~~p~~~~~~i~~l~~~~~~~~~~~~~~~~p~~ 240 (361)
T d1lt7a_ 161 VETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 240 (361)
T ss_dssp HHHHGGGSSCEEEEECCBTTBSTTSCCHHHHHHHHHHTTCSEEEEESSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred HHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99986036608898787178863677849999988730620555214554676899999999765541455135404652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~pn~~~~~~~~~p~~~~~~~~~~~~~~~~~~~a~~~~~~Ga~iIGGCCGttP~HI~~la~~l~~~~~~~~p~~~~~~~ 320 (361)
T d1lt7a_ 241 YHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGS 320 (361)
T ss_dssp BCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHTHHHHSSCCC-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 33778776566789887687665647999999999999987990999898798999999999985145899998888877
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 361 (361)
T d1lt7a_ 321 WGSGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPD 361 (361)
T ss_dssp -------------CTTSCHHHHHHCCCCCSCTTSCSCCCCC
T ss_pred CCCCEECCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 36776426875015446599998626678998881024898
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=0 Score=27186.77 Aligned_cols=1 Identities=0% Similarity=-1.455 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 97999888767999999999977997899984798644277787653168847998657898999999975799999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 60166666775999999999999999999999841222101468549999344101177866775434567887566889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECEEHHHHH
T ss_conf 99999899999999999999999968989999138568929985769999999997499817947999689078899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~ 320 (361)
T d1kewa_ 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPL 320 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCC
T ss_conf 99999985698899699899997534777767653001233445676543255689999875531578999998799889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
-
T Consensus 321 ~~l~e~i~~ti~w~~~n~~~~~~~k~~~~~~~~~~~y~~~~ 361 (361)
T d1kewa_ 321 ETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGRQ 361 (361)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHSCCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999999999986998887661778999998515699
|
| >d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Modulator in mal gene expression, MalY species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27186.11 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~ 80 (361)
T d1d2fa_ 1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 80 (361)
T ss_dssp CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 92738789799998999999999985788899899898999999999999838999802599908889999987653111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~ 160 (361)
T d1d2fa_ 81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD 160 (361)
T ss_dssp TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 23223233334520368998503437861133332223322211021003677416873044432233320234343200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d1d2fa_ 161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP 240 (361)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 11332200010234332323333456532222233333334454444445420034132267888876510223466510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~ 320 (361)
T d1d2fa_ 241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA 320 (361)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEE
T ss_conf 01247889987503411210133322036778888765310223355567415999983589999999999999869999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
=
T Consensus 321 v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr 361 (361)
T d1d2fa_ 321 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 361 (361)
T ss_dssp CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98360018899987999971899999999999999999619
|
| >d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Erwinia chrysanthemi, type A [TaxId: 556]
Probab=100.00 E-value=0 Score=27184.68 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~s~~~~G~a~~~ggttGG~gg~~g~v~~Vt~l~dL~~al~~~~~p~iI~v~G~I~~~~~~~~~~~~~~~~~ 80 (361)
T d1pe9a_ 1 AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CCCCCTTTTCCCCSSSGGGSSSCCCTTTTCCGGGEEEECSHHHHHHHHTTTTSCEEEEECSEEETTTTCCCCSHHHHHHH
T ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 95212111322477634351799876888848779996999999998747997089998549978887443332220223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~i~v~sn~TI~G~g~~~~i~~~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Dai~i~~~s~~VwIDH~ 160 (361)
T d1pe9a_ 81 SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV 160 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESC
T ss_pred CEEEECCCCEEEEECCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC
T ss_conf 15871898579870688489621699850366426999827865575577765668775667873687517743999852
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 s~s~~~~~~~~~~~~~~~~~~~~Dg~~di~~~s~~vTiS~~~f~~h~~~~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~ 240 (361)
T d1pe9a_ 161 TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE 240 (361)
T ss_dssp EEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEE
T ss_pred EECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 74058766533345567630541025875057431373387546877623735677776555786259997854268757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 R~P~~r~G~~Hv~NNy~~n~~~~~~~~~~y~~~~~~~a~il~E~NyF~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 320 (361)
T d1pe9a_ 241 RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA 320 (361)
T ss_dssp CSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEEESSCCEEEEESCEETTEE
T ss_pred CCCCEECCEEEEECCEEECCCCCCCCCCCEEEECCCCCEEEEECEEEECCCCCCCCCCCEEECCCCCEEECCCEEECCCC
T ss_conf 68873076489989665368676430001565057887799985088899987553220012178877955882520741
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~py~y~~~~~a~~v~~~V~~~AGaGkl 361 (361)
T d1pe9a_ 321 VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL 361 (361)
T ss_dssp CCCTTSSCBCCCSCCCSCCCCCCCCHHHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 23368765555667875210456257788988744798879
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=100.00 E-value=0 Score=27183.43 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~q~f~w~~~~~~~~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd 80 (361)
T d1mxga2 1 AKYLELEEGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVE 80 (361)
T ss_dssp CCSSCGGGTCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSS
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 93124455887999452687887855999999789999649998996957407999889998865665567543456778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~Gt~~d~~~LV~~aH~~GikVIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (361)
T d1mxga2 81 TRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFG 160 (361)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSSCSCCSCCCT
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78899999999999999779979998603255577656577666556545665567888766555676666554223456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~giDGfR~Daa~~v~~~f~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (361)
T d1mxga2 161 GFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGA 240 (361)
T ss_dssp TSCBBCTTSHHHHHHHTSSTTSHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHCCCEEECCCCSCHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf 76423677605689999999987655441687604505421199999987775168733256346788998655532688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~R~~~~~~a~a~llt~pGiP~iyYGd~~~~ 320 (361)
T d1mxga2 241 KVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAYAFILTYEGQPVIFYRDFEEW 320 (361)
T ss_dssp EEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSCHHHHHHHHHHSSSEEEEEHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 43041589999999944983789999862521025798781336736678010158999999982899017885897566
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------9
Q 003615 112 ----------------------------------------C 112 (807)
Q Consensus 112 ----------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~d~~~f~R~gd~~~ 361 (361)
T d1mxga2 321 LNKDKLINLIWIHDHLAGGSTTIVYYDNDELIFVRNGDSRR 361 (361)
T ss_dssp SCHHHHHHHHHHHHHTCCSCEEEEEECSSEEEEEECCCSSC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf 77079999999999716798478987799899996788889
|
| >d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human (Homo sapiens), liver isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Human (Homo sapiens), liver isozyme [TaxId: 9606]
Probab=100.00 E-value=0 Score=27125.01 Aligned_cols=1 Identities=100% Similarity=3.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGiLAaDeS~gT~~Krl~~igventeenr~~yR~~l~tt~~~~~~~IsGvILfe 80 (360)
T d1qo5a_ 1 AHRFPALTQEQKKELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFH 80 (360)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHSTTSCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSCGGGGGTEEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999981489879982689983777898769999779999998888518703435656898369
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLdgL~~Rl~~y~~~Ga~faKwRaVi~i~~~~ps~ 160 (360)
T d1qo5a_ 81 ETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSS 160 (360)
T ss_dssp TGGGCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCH
T ss_pred HHHHHHCCCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
T ss_conf 99841423677466899865963578348750007667765335662018899999986474445212200245577745
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~l~~~l~~~~V~LeG~lLKpnMv~pG~~~~ 240 (360)
T d1qo5a_ 161 LAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACT 240 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCBCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999999999999999971976431433245788746889999999999999887652134678742001025511055
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamN~~~~~~pW~lsfSygRALQ~s~Lk~W~g~~~n~ 320 (360)
T d1qo5a_ 241 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANK 320 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCTTCCEEEEBCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESGGGTHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHH
T ss_conf 55787888899887764303667871001688744888999999986157899976899643756189999857881428
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
|
T Consensus 321 ~~aQ~~~~~ra~~Ns~A~~G~y~~~~~~~~~~~~~lfva~ 360 (360)
T d1qo5a_ 321 EATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTAC 360 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCSCCCHHHHSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
T ss_conf 9999999999986068756740788887865443003139
|
| >d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=27119.73 Aligned_cols=1 Identities=0% Similarity=-1.322 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 mntfG~~~r~tt~GESHG~~lg~vidG~PaGl~i~~e~I~~~L~RR~pg~~~~t~R~E~D~veilSGv~~G~TtG~PI~~ 80 (360)
T d1sq1a_ 1 MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80 (360)
T ss_dssp CCEECSSSEEEEECCGGGSCEEEEEECCCSSCBCCHHHHHHHHHHTTC-----------CCEEECSSEETTEECSSCEEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCEEEE
T ss_conf 98775523898525578884489993409588609999999996179999889867888717992263689876750078
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~s~v~~IG~~~ 160 (360)
T d1sq1a_ 81 VVFNENAHSKDYDNLKDLFRPAHADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV 160 (360)
T ss_dssp EEC----------------------------------------CCCTHHHHHHHHHHHHHHHHTTTCEEEEEEEEETTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEE
T ss_conf 88716787310466623678750777876553985776887515999999999999999999862100666788996661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gvP~GLG~p~fdkLda~LA~A~mSIpAv 240 (360)
T d1sq1a_ 161 SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEVLYDKLDSKLAHALMGINAV 240 (360)
T ss_dssp CCSCGGGSCHHHHHHSTTCBSCTTTHHHHHHHHHHHHHTTCCCCEEEEEEEESCCBSCSBTTTBCHHHHHHHHHHTSTTE
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHHHHHCCCCC
T ss_conf 47776646877732573347546778999999999854578763189999846997648601365135888777336310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 KGVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~~GGi~GGiSnG~pi~~rva~KP~sSi~k~q~TVd~~~~~~~~~~~gRh 320 (360)
T d1sq1a_ 241 KAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRH 320 (360)
T ss_dssp EEEEETTGGGGGGSCHHHHCCCCSSSSCSCCTTCSEETTEEBSSCEEEEEEECCCC---------------------CCS
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 01530565565420066462222136644456786000235888628999978875567753222178988788557877
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
-
T Consensus 321 Dpc~vprA~~V~Eam~a~vlad~~L~~~~~~~~~~~~~~g 360 (360)
T d1sq1a_ 321 DPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG 360 (360)
T ss_dssp CSCTHHHHHHHHHHHHHHHHHHHHHHTGGGSHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 8707165049999999999999999845779999875449
|
| >d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus alcalophilus [TaxId: 1445]
Probab=100.00 E-value=0 Score=27116.43 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~ 80 (360)
T d1w23a_ 1 VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 98436707988488999999999998753046865434576788999999999999999968999878999478489999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~i~~ 160 (360)
T d1w23a_ 81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQN 160 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEEEE
T ss_conf 99876411467654155324123334788777640201202444453201112200335553213754881665104432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1w23a_ 161 FPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240 (360)
T ss_dssp CCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 21463036986113453432243565542488504434457765046703434313445774200124543100013331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~~~l~~~G 320 (360)
T d1w23a_ 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQG 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20120015778777641004899999999999888887633520036888201640699998599735999999999789
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
-
T Consensus 321 I~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~~ 360 (360)
T d1w23a_ 321 FVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKENA 360 (360)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8665077766717899508999999999999999998559
|
| >d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Amidinotransferase domain: L-arginine: glycine amidinotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27116.05 Aligned_cols=1 Identities=0% Similarity=-2.056 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~vn~~sE~~~Lk~VivGr~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ea~ee~d~l~~~Le~~GV~V~r 80 (360)
T d1jdwa_ 1 CPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRR 80 (360)
T ss_dssp CCCBBCBSSSCEEEEEECBCTTCBCCCCCHHHHTTSCGGGHHHHHHHTTSBSCHHHHHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99722767463739999517767799976221347856665542332146455999999999999999999876967861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~RD~~~~ig~~~i~~~~~~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (360)
T d1jdwa_ 81 PDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELY 160 (360)
T ss_dssp CCCCCTTCEEECSSCEEECCCBCCHHHHEEEEBTEEEECCBSCGGGTTGGGGTHHHHHHHHHTTCEEEECCCCCCCGGGB
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 46233310101000003675545476202663794233333456553524454157887514675304435543345333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~H 240 (360)
T d1jdwa_ 161 NQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMH 240 (360)
T ss_dssp CTTCCCSSHHHHHHHHHHTCCSBCSSSCCBCGGGEEEETTEEEECCCSSCCHHHHHHHHHHHTTTCEEEECCBSSCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCC
T ss_conf 45544544454321112463254055125425420111652120234422135899998644665311102336733327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lD~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~N~LsI~p~~Vi~~~~n~~~~~~L 320 (360)
T d1jdwa_ 241 IDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMF 320 (360)
T ss_dssp STTTEEEEETTEEEECTTSCBTTHHHHHHTTCEEECCCCCCCCTTSCCSSSCGGGGGCCEEEETTEEEEETTCHHHHHHH
T ss_pred CCCEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEEECCCCHHHHHHH
T ss_conf 66226871587189951336355531332585358535223454542153453051589997699999908889999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
=
T Consensus 321 ~~~Gi~vi~i~~~e~~~~~GG~~CmT~pl~Reg~~e~y~~ 360 (360)
T d1jdwa_ 321 EKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYLD 360 (360)
T ss_dssp HHTTCEEEEECCHHHHTTTCCTTTTEEEEEESCCCCCSCC
T ss_pred HHCCCEEEEECHHHHHCCCCCCEEECCCEEECCCCCCCCC
T ss_conf 9888989992626543159997384725087786554669
|
| >d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27115.68 Aligned_cols=1 Identities=0% Similarity=-0.093 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a 80 (360)
T d1bjna_ 1 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA 80 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 93774798858899999999998751024686543457678899999999999999996899997799978826888863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~~~i 160 (360)
T d1bjna_ 81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDET 160 (360)
T ss_dssp HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCC
T ss_pred HHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 00102566543330035630344687776417632121012477764035666412577604999655555457652100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1bjna_ 161 PDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPP 240 (360)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred ECCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 01244522565662352424436513305999726665447776267641012211446774112678876532024444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~~~l~~~Gi 320 (360)
T d1bjna_ 241 TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGL 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 30278889999988641068999999999999988755335430125774344523999875885249999999997898
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
=
T Consensus 321 ~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~~~ 360 (360)
T d1bjna_ 321 HALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG 360 (360)
T ss_dssp ECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 7634877567388983488999999999999999999739
|
| >d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: AF1104-like superfamily: AF1104-like family: AF1104-like domain: Hypothetical protein At2g17340 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27114.86 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~v~~pll~~~~~~~y~~~tv~~~~~~~~~~~~~~~~~~Wl~~f~~~i~~~~~~A~s~~~~~da~~Ra~~f~~~y~~~L~ 80 (360)
T d1xfia_ 1 EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILE 80 (360)
T ss_dssp CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97566466774213766887788887555221526677999999977889999985089999889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~vr~aiAGNif 160 (360)
T d1xfia_ 81 DLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIF 160 (360)
T ss_dssp HHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99848765576017889999999999976999800999999999999987999999753016079999999999987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 D~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~rell~~g~~V~ 240 (360)
T d1xfia_ 161 DLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV 240 (360)
T ss_dssp ---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEE
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 30220021444046426999999854589753669999998735775407999358734999887899999965898499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~KGMGr~~~ 320 (360)
T d1xfia_ 241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIE 320 (360)
T ss_dssp EEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHCCCEEEECCCCCHHH
T ss_conf 99888752336249999999998751205765202135189657999887185768999999983699999828751132
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
-
T Consensus 321 tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~ 360 (360)
T d1xfia_ 321 TNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV 360 (360)
T ss_dssp BSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCHHHCCCCEEHHHHHCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 0101322788103334258999999499611279982479
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=100.00 E-value=0 Score=27113.38 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~~~r~~~l~~~~~~~L~~lGl~~~i~~~~~~~ 80 (360)
T d1pn0a1 1 TKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDM 80 (360)
T ss_dssp CCEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCC
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 99888788989989598999999998705332489868998689998868859998989999999869838999626776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~dg~~s 160 (360)
T d1pn0a1 81 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 160 (360)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCC
T ss_conf 31599722667741112455543333344320253188999999999986165411356732563688638999605776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1pn0a1 161 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMI 240 (360)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCE
T ss_pred CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
T ss_conf 35999998404566542331113787058866327765512456865302368888777631754332001011221110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~al~Da~~La~~l~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 320 (360)
T d1pn0a1 241 VTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRL 320 (360)
T ss_dssp ECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14444646928983675432050457887520889999999888876589738999999999999999999999999998
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~G~~~~y~~ 360 (360)
T d1pn0a1 321 FSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDE 360 (360)
T ss_dssp HHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 7799368888860335587899999865554330766688
|
| >d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: Patatin domain: Patatin species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
Probab=100.00 E-value=0 Score=27111.98 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~ 80 (360)
T d1oxwa_ 1 LGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVP 80 (360)
T ss_dssp CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99700899989878999999999999997497234667997142099999963999999999869970318999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~f~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 160 (360)
T d1oxwa_ 81 FYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDIS 160 (360)
T ss_dssp HHHHHHHHHTCCCCCSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHH
T ss_pred HHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99861210100123346764546999999999958701332167532673015888748973644356886322698861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l~~~~~~~~~~~~~~~~~~~~~s~gtg~~~ 240 (360)
T d1oxwa_ 161 YSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTS 240 (360)
T ss_dssp HHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCCGGGEEEEEECCCCBC
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 15513887778779732247787326774033542256726778999987624675322245677663155314666664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~R~~~~~~~~~~~~lDd~s~~~l~~l~~ 320 (360)
T d1oxwa_ 241 EFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQ 320 (360)
T ss_dssp TTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 33333212442001167689999999876559999999999987447988479974886656541146899999999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
.
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~~~~ 360 (360)
T d1oxwa_ 321 VGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRANKA 360 (360)
T ss_dssp HHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999996330343066799999999999999998763059
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=27109.48 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 t~YD~IIVGsG~aG~v~A~rLae~g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (360)
T d1kdga1 1 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDI 80 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95778998968899999999801879699998168987666543454422215764246763212211488755478655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~G~~lGGsS~in~~~~~r~~~~D~~~~~gwp~~~~~l~py~~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 160 (360)
T d1kdga1 81 TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQG 160 (360)
T ss_dssp SSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCHHHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCHHCCCCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 43101220111011333112244022100246653333013444333202332110037886344422589999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~G~R~s~~~~yl~~a~~r~nl~i~t~~~V~rI~~d~~ra~GV~~~~~~~~~~~~~ 240 (360)
T d1kdga1 161 YNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFI 240 (360)
T ss_dssp CEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCCEEE
T ss_conf 16787455788544321000120135322322211356664266300104867999997299899999985236762489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~v~a~~eVILsAGai~SP~LLl~SGIGp~~~L~~~gi~p~v~~~l~~~~~~~~~p~g~~~~~~~~~~~v~~~~~~~~g~~ 320 (360)
T d1kdga1 241 PVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVFGTN 320 (360)
T ss_dssp EEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTCBCSCTTTCSBCTTCBBTTCS
T ss_pred EEEECCEEEEECHHHHCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEECCCCEEECCC
T ss_conf 99979999993656747299986589955666775328643445546453133663200017897562777531463368
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
=
T Consensus 321 ~l~~~~a~~~p~~~~~~~~~~~~~~ae~aa~~il~~~~~~ 360 (360)
T d1kdga1 321 NLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 360 (360)
T ss_dssp SEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 8368854036545789977556588999998875204899
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=0 Score=27111.86 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~W~~~w~~~a~~~~~~a~~~~~~g~~~~A~~~~~~A~~~~~~a~~~~~ 80 (360)
T d2jbwa1 1 KPEDEMDNWGRLILDGVSYSDMVGARDRPKEITWFDYWMSLANEYEQEAERKVALGHDLSAGELLMSAALCAQYAQFLWF 80 (360)
T ss_dssp CHHHHHCCHHHHHHHTCCHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 92658888776761797589998630689942799999999999999999999769987899999999999997356557
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~ 160 (360)
T d2jbwa1 81 DERRQKGQARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMA 160 (360)
T ss_dssp STHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 93677899999999999986479873996357677666239993699999529999379876477899999999966998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~ 240 (360)
T d2jbwa1 161 TATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDY 240 (360)
T ss_dssp EEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTT
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHH
T ss_conf 99971642223576555656699999999999996600155553423331050999987515987554999746555777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g 320 (360)
T d2jbwa1 241 WDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDG 320 (360)
T ss_dssp GGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGGGEEEEEETTC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 75433456677777506873577889877406645467527999899972999928999999999657998599997999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
-
T Consensus 321 ~H~~~~~~~~~~~~i~dWl~~~L~~g~~~apt~~~~p~~~ 360 (360)
T d2jbwa1 321 DHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGWPLEH 360 (360)
T ss_dssp CGGGGGGTTHHHHHHHHHHHHHHTSSCCCCCCEESCSCC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9677767579999999999998314897899877788889
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=0 Score=27112.64 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 1 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCCHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 98601005146889999999989969999899994899169998888999899999999992899899999899994887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~ 160 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160 (360)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred EECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCC
T ss_conf 50897127741211454321000111110000012221000000135520230121322566521233121100025654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 240 (360)
T d1k32a3 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 240 (360)
T ss_dssp EEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCC
T ss_conf 26630455713530354322110012577999999959985575333544023203641179852469601206877767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~ 320 (360)
T d1k32a3 241 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDL 320 (360)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred CCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
T ss_conf 15531136526654001012476752675413898569999735997069996489987999979997498864886879
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------9
Q 003615 112 ---------------------------------------C 112 (807)
Q Consensus 112 ---------------------------------------C 112 (807)
-
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~~ 360 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCEE
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCC
T ss_conf 9999898999997899499999999985459984162259
|
| >d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Bacteriochlorophyll A protein superfamily: Bacteriochlorophyll A protein family: Bacteriochlorophyll A protein domain: Bacteriochlorophyll A protein species: Prosthecochloris aestuarii, strain 2k [TaxId: 1102]
Probab=100.00 E-value=0 Score=27046.91 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 tTtA~~Dyeiileggssswg~vk~rakvNVP~a~pllp~dc~iKi~~Kpl~~~kgvVR~t~~ieSiVDstknkl~vE~DI 80 (359)
T d4bcla_ 1 TTTAHSDYEIILEGGSSSWGQVKGRAKVNVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVDI 80 (359)
T ss_dssp CCEEEEEEEEEECCTTCCCEEEEEEEEECSCCCCSSCCEEEEEEEEEEECC---CCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHCCEEEEEEEE
T ss_conf 94212334789707876531023567603898777766666227620205776786999864045776401404899862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ANEtkdrRiavGEG~vsVGdFSH~FsfEGsVvnl~YyRsdavrrNvpnp~ymqGrqfHDi~mkVPldn~dlIdTWe~~~~ 160 (359)
T d4bcla_ 81 ANETKDRRIAVGEGSLSVGDFSHSFSFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVDTWEGFQQ 160 (359)
T ss_dssp EESSSSEEEEEEEEEEEETTEEEEEEEEEEEEEEESCCCHHHHTTCSSCCCCCEEEEEEEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCEEEECCCEEEEEEEEEEEEEEEECCHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHHHHHHH
T ss_conf 35787640673243387602224578620488999950146763599865552731100478558995568899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 a~~~~~~nF~dwIrdfWfIGPa~~al~egGQ~is~I~v~~~~~e~g~k~pvgv~rwrfsh~gsgivdsisrw~elfp~d~ 240 (359)
T d4bcla_ 161 SISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGEKGPVGVTRWKFSHAGSGVVDSISRWTELFPVEQ 240 (359)
T ss_dssp HC---CCSHHHHHHHHHSTTTHHHHHHHTTEEECCCEEEEEEEECC---CEEEEEEEEEEEESSCCHHHHTTTTTCCGGG
T ss_pred HHHCCCCCHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH
T ss_conf 87538974566556514522778888752730330799741025688787553267863787510226777887477634
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~~pa~ieg~frsdsqgievkvdg~lpgvsvdaggg~rrilnhpliplvHHGmvgk~n~f~vd~q~kv~lPkGyK~ryaA 320 (359)
T d4bcla_ 241 LNKPASIEGGFRSDSQGIEVKVDGNLPGVSRDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDTQLKIVLPKGYKIRYAA 320 (359)
T ss_dssp CSSCEEEEEEEEECSSCEEEEEEEEETTSEEEEETTEEEECCCCHHHHHHHTTTTTSSCCEEEEEEEEECCTTCEEEEEE
T ss_pred CCCCCEECCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHCCCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEECC
T ss_conf 39850441454456774489982456860442788722441688620031230312577613368999726871676516
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 pqf~sqn~eey~wsGG~Ya~W~EhvCKGg~gqF~ilyaq 359 (359)
T d4bcla_ 321 PQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ 359 (359)
T ss_dssp SCCSEEETTEEEEESHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred CHHHHCCHHHEEECCCHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 301001254368637147888875414887754788429
|
| >d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Glycolate oxidase species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=100.00 E-value=0 Score=27042.57 Aligned_cols=1 Identities=0% Similarity=-1.722 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~i~d~~~~A~~~lp~~~~~y~~gga~~~~t~~~N~~~Fd~i~l~pr~L~d~~~iDlst~~lG~~~~~P~~IspMtg 80 (359)
T d1goxa_ 1 MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAM 80 (359)
T ss_dssp CCCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSC
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
T ss_conf 95467999999999868888889870567741999999999984626331246887798755678835578615265323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~~~~~~~e~~lA~aA~~~gi~~~~~s~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~vd~~~ 160 (359)
T d1goxa_ 81 QKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 160 (359)
T ss_dssp GGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 46677864787656688629722334554565023677469984112222106778999999888754033442224102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~kg~~~~~da~~ 240 (359)
T d1goxa_ 161 LGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 240 (359)
T ss_dssp CCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 22344412442357853314566553036676556411799998513788999999999861566532200244688899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~~~g~~~~~vsnhggr~ld~~~~~~~~l~~i~~~~~~~~~iiadGGIR~G~Di~KALaLGAd~vgigrp~L~~la~~g~ 320 (359)
T d1goxa_ 241 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320 (359)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHCCCCCEECCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCH
T ss_conf 98706653220321110000000025445566503478621465057575778999998489989876899999984349
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
=
T Consensus 321 ~gv~~~i~~l~~EL~~~M~l~G~~~i~~L~~~~l~~~~~ 359 (359)
T d1goxa_ 321 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCC
T ss_conf 999999999999999999985899978959954657899
|
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=0 Score=27040.24 Aligned_cols=1 Identities=0% Similarity=-1.722 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98417603379998533999999999999998999999999624677899865999727899965799999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHWLS~vP~~l~ 160 (359)
T d1m6ex_ 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIE 160 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCC
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCC
T ss_conf 98638999972899847888526799998463012678875898657722320178874577642003344303885445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~dmv~eG 240 (359)
T d1m6ex_ 161 SNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEG 240 (359)
T ss_dssp CCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 78886797479998999999999999999999999998357857999985567898888863518999999999999859
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~a~~~RA~~e~~l~~hf 320 (359)
T d1m6ex_ 241 LIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF 320 (359)
T ss_dssp CSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98899997316842668889999885148975655447654154201223444565889999999999999999999985
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 g~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~~ 359 (359)
T d1m6ex_ 321 GEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKSD 359 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
T ss_conf 828899999999999996076549953999999996689
|
| >d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TROVE domain-like family: TROVE domain-like domain: 60-kda SS-aARo ribonucleoprotein species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Probab=100.00 E-value=0 Score=27038.52 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~q~~p~~~~qv~N~aGg~a~~~~~~~~L~rfl~~Gt~~~tyY~~~~~l~~e~~~~l~~l~~~~~~~~~v~~l~~~~~~g 80 (359)
T d1yvra1 1 MDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEG 80 (359)
T ss_dssp CCTTSCSSTTCEECTTSCEEEECCHHHHHHHHHHHCCTTCCSSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 98777698211556667720369989999999961368986745826526889999999997278278999999998437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~r~~p~l~aLal~a~~~d~~~r~~a~~~~~~v~r~~~~L~~fv~~~~~~~~~~~~~~~gr~lrkav~~Wy~~~~~~~L 160 (359)
T d1yvra1 81 RAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNL 160 (359)
T ss_dssp CSSCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
T ss_conf 88784269999999986898889999999999996682189999999998536768786258999999999864998999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 A~~~~Ky~~r~gwShkDlLrl~Hpkp~~~~~~~l~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 240 (359)
T d1yvra1 161 AMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEI 240 (359)
T ss_dssp HHHHTSCCCSSSCCHHHHHHHTTCCCSSHHHHHHHHHHHTCHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998517778997999999808999847899999999638511111134433660379999999999998715878889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~lI~~~~Lt~E~~p~~~~~~~~vWeaLi~~mp~~ALLRNL~~l~~~gvl~~~~~~~~~V~~rL~D~~~l~~arihP~~~ 320 (359)
T d1yvra1 241 IHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHI 320 (359)
T ss_dssp HHHHHHHCCCGGGSCTTGGGCHHHHHHHHHTCCHHHHHHHHHHHHHTTTTCTTCHHHHHHHHHHTCHHHHHHTTCCHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHH
T ss_conf 99999728989870144316899999998718899999978877452567877278999999847999999725582999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 L~A~~~Y~~g~~~~~~~~w~p~~~i~~AL~~A~~~sf~~ 359 (359)
T d1yvra1 321 LVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKL 359 (359)
T ss_dssp HHHHHHHHHCC-----CCCCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999984478666677788599999999999987079
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=27038.26 Aligned_cols=1 Identities=0% Similarity=-0.658 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~gPL~girVld~~~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i 80 (359)
T d1x74a1 1 AGPLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLI 80 (359)
T ss_dssp CCTTTTCEEEEECCSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEE
T ss_conf 98999989998278308999999999839979998999999813456651898599972859899999999986689988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~n~~pg~~~~lgl~~~~l~~~nP~lI~~sisgfG~~Gp~~~~~~~D~~~qA~sG~~~~~g~~~~~P~~~~~~~~d~~~g~ 160 (359)
T d1x74a1 81 EGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGS 160 (359)
T ss_dssp ECSCTTHHHHHTCSHHHHHHHCTTCEEEEEESSCSSSTTTTSCCCHHHHHHHTSTGGGSSCTTSCCCCCTTCCCCCCTTH
T ss_pred ECCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH
T ss_conf 66888736541898788776347816999968988898666565654455556622212789999878732189876799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~y~t~DG~~i~~~~~~ 240 (359)
T d1x74a1 161 MFLLVGILAALWERQSSGKGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIE 240 (359)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCSSTTCSTTTTCSTTEEEEECTTSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECC
T ss_conf 99999999999999856997486311167788877799999980798865688867666765476254788368996277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~el~~~l~~~~~~~t~~e~~~~l~~~gvp~~pV~~~~ev~~dpq~~~r~~~~~ 320 (359)
T d1x74a1 241 PQFYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAFGEVHNEPHIIERNTFYE 320 (359)
T ss_dssp HHHHHHHHHHHTCCGGGSCCTTCGGGHHHHHHHHHHHHHTSCHHHHHHHTSSSSSCEEECCCHHHHTTCHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCHHHHHHCCEEE
T ss_conf 78777654121201344321101444688899998776666489999999767970895289999874978897199998
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~p~~s~tp~~~~~~P~lGeht~eIL~e~lG 359 (359)
T d1x74a1 321 ANGGWQPMPAPRFSRTASSQPRPPAATIDIEAVLTDWDG 359 (359)
T ss_dssp CSSSEEECCSSEESSSCCCCCCCCCCCCCHHHHHHHHTC
T ss_pred ECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 689114578878899998899999999789999997279
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27036.57 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~K~K~aVLl~n~G~P~s~~dv~~yL~~~~~d~~vi~~P~~~~l~~~i~~~r~~~~~~~Y~~igg~SPL~~~t~~q~~~l~ 80 (359)
T d2hrca1 1 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMV 80 (359)
T ss_dssp CCCCEEEEEEECCCCSSGGGHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99966999974799999789999999974799721163488888887411008899999863899922999999999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~L~~~~~~~~~~~v~~amry~~P~i~~~l~~l~~~G~~~iv~lPLyPqyS~sTtgs~~~~~~k~l~~~~~~~~~~~~~i 160 (359)
T d2hrca1 81 KLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTI 160 (359)
T ss_dssp HHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHHTSCCSSEEEEE
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 89876347665437998514355305889999985587440010155423412003226899999998541013566434
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~p~yi~a~a~~i~~~~~~~~~~~~~~~~llfS~HglP~~~~~~gdpY~~q~~~t~~~i~~~l~~~~~~~~~fQSr 240 (359)
T d2hrca1 161 DRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSK 240 (359)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSCGGGTTTCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECC
T ss_conf 67788188999999999999972553357772699961123131454189517889999999998734430333244447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~g~~~Wl~P~~~~~l~~l~~~G~k~v~v~p~gFvsD~lETl~Eidie~~e~~~~~~G~~~~~~vp~lN~~p~fi~~la~l 320 (359)
T d2hrca1 241 VGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADL 320 (359)
T ss_dssp CSSSCBSSSBHHHHHHHHHHTTCCEEEEEECSCSSCCHHHHTTTTTHHHHHSCSSSCCSEEEECCCSTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 79976679858999999997499739998986566534679988899999999975996489827999998999999999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 v~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 359 (359)
T d2hrca1 321 VHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 359 (359)
T ss_dssp HHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTCCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 999864788777556888999887103888850053779
|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V alpha chain (RecD) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27036.41 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~l~~~~~~~~~r~~d~~fa~~~~~~~~~~~~l~~al~s~~~~~Gh~cl~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1w36d1 1 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNW 80 (359)
T ss_dssp CTHHHHHHHHHTTSSCHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHTTCSEEETTTTTTGGGGSSSCCCCSSCCTTCSTH
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHCCCCCHHHH
T ss_conf 96899999998183568999999998558985899999999999839997627999751200244430222155558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~l~~~~~v~~~~~~~p~vl~~~~lyl~~~~~~E~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~A~~~a 160 (359)
T d1w36d1 81 EECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVA 160 (359)
T ss_dssp HHHHHHSTTEESSSSCCSEEECSSEEEEHHHHHHHHHHHHHHTSCCBCCCCCHHHHHHHHHTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99987276656777888658778884047899999999999998637799983789999997465765663899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (359)
T d1w36d1 161 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 240 (359)
T ss_dssp HTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSCCCCSCSCCCBTTT
T ss_pred HCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 70885999768988752169999999999875269828984375999999998887777645810445542013455789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~~~~~~lILvGD~~QLppV~~G~vl~dl~~~~~~~~ 320 (359)
T d1w36d1 241 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGF 320 (359)
T ss_dssp SCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTCCTTCEEEEEECTTSGGGTSTTBCHHHHGGGGTTCC
T ss_pred HHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCC
T ss_conf 98763100067777543666541346533214489999999987259998999777221668788818999999773477
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~l~r~~~~~~~~~~~~~~~~i~d~l~~L~knyR 359 (359)
T d1w36d1 321 TAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR 359 (359)
T ss_dssp CHHHHHHHHHHSSSCCCCCSTTTTHHHHTTEEECCCCCC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHCCCCCCC
T ss_conf 899999999985410001333334202172112545789
|
| >d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type A [TaxId: 5061]
Probab=100.00 E-value=0 Score=27034.42 Aligned_cols=1 Identities=0% Similarity=-1.125 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~v~~~a~Gfa~~ttGG~~g~~~~Vtt~~eL~~al~~~~PriI~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1idka_ 1 VGVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQDD 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97565574144578788897379938999999986289974999863480356644112333234565431101114443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~DaI~i~~ 160 (359)
T d1idka_ 81 WCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDD 160 (359)
T ss_dssp HHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECS
T ss_pred CCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCEEECCCCCCCCCCCEEEEEC
T ss_conf 22235556763014532167770572799608861588499657468874682199979599568777787887588517
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 s~nVwIDH~s~s~~~d~~~~~~~~~s~~vTis~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~~~R~P~~ 240 (359)
T d1idka_ 161 CDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV 240 (359)
T ss_dssp CEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEEECCCCCCCEEEECCCCCCEEEECEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEE
T ss_conf 86489980060357788635610578726620406523312234566556687332289862899924981577888401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 320 (359)
T d1idka_ 241 QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGEVCSTYLGRDCVINGFGSSGT 320 (359)
T ss_dssp CTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEEEESSEEECCSSTTGGGGGHHHHSSCCCCCEEESSCC
T ss_pred CCCCEEEEECCEEECCCCEEEECCCCEEEEEECEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34305999876997762557835775158996618867767754467723733567777421244476443113354664
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~nAG~Gkl 359 (359)
T d1idka_ 321 FSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGNL 359 (359)
T ss_dssp CCCBCCTTGGGGTTSCCCCCCCGGGHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 366776521355665545768878977766434898879
|
| >d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type B [TaxId: 5061]
Probab=100.00 E-value=0 Score=27033.20 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 a~v~g~a~Gfa~~ttGG~~g~v~~Vtt~~eL~~al~~~~PriI~~~gtid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1qcxa_ 1 AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLHS 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98776676055688788897489938999999986289974999886681344556322334245554322222325332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~Dai~i~~ 160 (359)
T d1qcxa_ 81 WCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD 160 (359)
T ss_dssp HHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEES
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEEEECCCCEEEECEEEECCCCCCCCCCCEEEEEC
T ss_conf 22344556762035530267650784798749851588189746568886784489969098558777787897478617
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 s~nvwIDH~s~s~~~d~~~~~~~~~s~~vTvs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~~~R~P~~ 240 (359)
T d1qcxa_ 161 SDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV 240 (359)
T ss_dssp CCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEECCCCCCCCEEEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 88789982564456887537602677756865307616754101256567787400279861999925615887778606
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~ 320 (359)
T d1qcxa_ 241 QGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSG 320 (359)
T ss_dssp CSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEECSSCSSEEECCCSHHHHGGGHHHHSSCCCCCEEESCC
T ss_pred CCCCEEEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 07844899941796767778824775189998158889887665564320304687554531245556400011335676
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~t~~~a~~v~~~V~~~AG~GK 359 (359)
T d1qcxa_ 321 SMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQGK 359 (359)
T ss_dssp CCCCBCGGGGGGGTTSCCCCCCCGGGHHHHHHHHSSTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 314688530046677663576899999987775289999
|
| >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Alcohol dehydrogenase TM0920 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27036.16 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~f~f~~P~~i~fG~g~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~ 80 (359)
T d1o2da_ 1 VWEFYMPTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVE 80 (359)
T ss_dssp CCCCCCCCEEEESTTHHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHH
T ss_pred CEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 93737999899948999999999997599589998586888740999999999876984999757468979899987642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~~avi~~~~~~~k~~ 160 (359)
T d1o2da_ 81 RYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGC 160 (359)
T ss_dssp HHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCCEEEEECTTSCEEEE
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHCCCCC
T ss_conf 00135775688516642001899999998489971331167534457787588426455422114214545675500102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~a~~ai~~~~~~l~~~~~~~~~a~~~l~~as 240 (359)
T d1o2da_ 161 TLMFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEGNREARKKMFVAS 240 (359)
T ss_dssp ECCCCSEEEECGGGGGGCCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 35778768860754058534445665317999988876400255156688999999999876532104699999877899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~g~a~~~~g~g~~Hai~h~l~~~~~i~HG~~~ai~lp~v~~~~~~~~~ek~~~ia~~lg~~~~~~~~~lglp~~lg~~ 320 (359)
T d1o2da_ 241 CLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVS 320 (359)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTTCHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99987551678644410245213303877412578879999999998759999999999889999999985991005979
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------9
Q 003615 112 --------------------------------------C 112 (807)
Q Consensus 112 --------------------------------------C 112 (807)
-
T Consensus 321 ~~~i~~~~~~a~~~~~~~~np~~~t~e~i~~il~~alg~ 359 (359)
T d1o2da_ 321 SEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGV 359 (359)
T ss_dssp HHHHHHHHHHHTTCGGGGGSSSCCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999987385021899468999999999987669
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=0 Score=26958.44 Aligned_cols=1 Identities=0% Similarity=-0.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~p~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l 80 (358)
T d2hdsa1 1 APQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEI 80 (358)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 96789999999999999838998699999999999999688602566988999997863045999999999999755986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~llg~iie 160 (358)
T d2hdsa1 81 KLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAV 160 (358)
T ss_dssp CTTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
T ss_conf 42300010000002321101455665026768980430121222089999876175335898426743541110013231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~tg~~~~~~~~~~i~~PLgm~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~f~~~~l~~~~~ 240 (358)
T d2hdsa1 161 KPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDI 240 (358)
T ss_dssp GGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCTTHHHHTCCEECHHHHHHHHHHHHCGGGC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCC
T ss_conf 13699821202667775059642527898467315102433686412344545578764623899999999998589987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~G~~~G~~ 320 (358)
T d2hdsa1 241 NEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFG 320 (358)
T ss_dssp SSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCTHHHHTSTTSSSSCCCEECEEEEEEECCCSSEEEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
T ss_conf 86888888877632302368766555402035667753234676655211234444556777777850797345267425
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
=
T Consensus 321 s~~~~~Pe~~~~ivvltN~~~~~~~~~~~~~~il~al~ 358 (358)
T d2hdsa1 321 SYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ 358 (358)
T ss_dssp EEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 89999987997999997799998789999999999759
|
| >d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class II FBP aldolase domain: Fructose-bisphosphate aldolase (FBP aldolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26957.84 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~v~t~~nlk~~L~~A~~~~yAV~AfNv~n~e~~~Aii~AAee~~sPvIlq~s~g~~~y~gg~~~~~~~~~~ 80 (358)
T d1dosa_ 1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQG 80 (358)
T ss_dssp CCGGGTCCSEECCTHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTH
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHH
T ss_conf 94663346776757999999999998795699878698999999999999968998999061688770764156668767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~a~~v~~~a~~~~VPV~lHLDHg~~~~~~~i~~~idag~~~~~~~~~~gfsSVMiDgS~l~~eeNi~~Tk~v 160 (358)
T d1dosa_ 81 AAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKY 160 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88888898999999999837997899657652146778887788899999982777776556778857789999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ve~Ah~~gv~VEaElG~igg~Edg~~~~~~~~~~~~T~peea~~~~~ef~~~tgvD~LAvaiGt~HG~Yk~~~~~l~p~l 240 (358)
T d1dosa_ 161 LERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCCHH
T ss_conf 99985537768984336404567753210102330599899999999876467651565432614553478876677014
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~i~~~~~vp~~~~~LVlHGgSGip~e~i~~ai~~GV~KiNi~Tdlr~a~~~~ir~~~~~n~~~~~~~~~~~~~~ 320 (358)
T d1dosa_ 241 LRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGE 320 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHGGGSSSSEEETTEE
T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
T ss_conf 69999999987289986534120588897688999999819848961719999999999999984846541113675444
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
-
T Consensus 321 ~~~~k~~fDPrk~l~~a~~am~~~v~~~~~~fgs~nkl 358 (358)
T d1dosa_ 321 DQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358 (358)
T ss_dssp EEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 57777767908889999999999999999982897779
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=0 Score=26957.68 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~ 80 (358)
T d1ecea_ 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSIN 80 (358)
T ss_dssp CCCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCC
T ss_pred CCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCC
T ss_conf 99970996099799999989999987667411345666667724799999999976998899347688746877777755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~ 160 (358)
T d1ecea_ 81 FYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLH 160 (358)
T ss_dssp CSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECS
T ss_pred CCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 33368111011699999999999997899066401356666888655688277999999999998864476536755320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y 240 (358)
T d1ecea_ 161 NEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDY 240 (358)
T ss_dssp SCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
T ss_conf 33456776775413455899999999999850899589996546676665322566430432776678667658986414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~W~ 320 (358)
T d1ecea_ 241 ATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWS 320 (358)
T ss_dssp CTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSHHHHHHHHHHHHHTCCHHHHTTSSCEEEESC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 78767753456630356677788889999998459709992678888999869999999999999998540181699973
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
-
T Consensus 321 ~k~~~~~~~G~~~~dw~~~~~~~~~~i~~~~~~~~~~~ 358 (358)
T d1ecea_ 321 WNPDSGDTGGILKDDWQTVDTVKDGYLAPIKSSIFDPV 358 (358)
T ss_dssp SCSCCTTTCCSBCTTSSSBCHHHHHHHGGGCCCCCCCC
T ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCC
T ss_conf 77777887640169888878366532030213568989
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=100.00 E-value=0 Score=26958.54 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
=
T Consensus 1 GFID~HtH~D~~~~~~p~~~~~~~~GVTT~v~GncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~~~~~N 80 (358)
T d1m7ja3 1 GFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVN 80 (358)
T ss_dssp CEEESSCCCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSE
T ss_pred CCEECCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 92522788845532597986414699764888177777145775442005778504777686789999999973587654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 va~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~ 160 (358)
T d1m7ja3 81 AACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHM 160 (358)
T ss_dssp EEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEEC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 03541455554415583023578899999999999999658765235775441035898999999988886098346653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 r~~~~~~~~~~~e~~~~a~~~g~~~~ish~~~~~~~~~~~~~~~~~~~~~a~~G~~i~~d~yPy~ag~t~l~~~~~~~~~ 240 (358)
T d1m7ja3 161 RDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQDVSLDAYPYVAGSTMLKQDRVLLAG 240 (358)
T ss_dssp SCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHSCEEEEECSCSCEEEECCCCTTTTSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 25663178888999999997298657513345777652568999999999863798641215854134522234444133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~G~~l~eiA~~~g~~p~d~~~dl~~~~~~~~~~~e~~v~~~l~~p~~~igSDgga~~~~~hpr~~gt 320 (358)
T d1m7ja3 241 RTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGT 320 (358)
T ss_dssp CEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHH
T ss_pred CHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 30110266676542574999998839987887888742210010589999999983999228767665789958888661
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
=
T Consensus 321 f~r~L~~~vRe~~~lsLeeAI~k~T~~pA~~~Gl~dRG 358 (358)
T d1m7ja3 321 FPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERG 358 (358)
T ss_dssp HHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCS
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999567881789999999987999983987899
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=100.00 E-value=0 Score=26956.45 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~dpr~dP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~ 80 (358)
T d1jkma_ 1 PGRLGDESSGPRTDPRFSPAMVEALATFGLDAVAAAPPVSASDDLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETS 80 (358)
T ss_dssp CHHHHCTTCCTTTCTTSCHHHHHHHHTTTTTSCCCCCSSCTTSCHHHHHHHHHHHHHHHHHHHHHSCCCCTTCCCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 99888987786779998999999997536665677998783315599999987647999988755454269988885079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~ 160 (358)
T d1jkma_ 81 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS 160 (358)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH
T ss_pred EEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
T ss_conf 99996789988899999417888898749996387104066542221067888875100133000001246565677733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 240 (358)
T d1jkma_ 161 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 240 (358)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCH
T ss_conf 56777888889987232468754034444672679999999976527876542223455211366576411110234210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~ 320 (358)
T d1jkma_ 241 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLRDEGIAFARRLARAGVDVAARV 320 (358)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 00234445516666677642775577457300234530110258999899987887787999999999998799589999
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
=
T Consensus 321 ~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 358 (358)
T d1jkma_ 321 NIGLVHGADVIFRHWLPAALESTVRDVAGFAADRARLR 358 (358)
T ss_dssp ETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 79896463542466697899999999999999897569
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26959.63 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 dRv~P~C~~f~~CGGC~~qh~~y~~Ql~~K~~~l~~~~~~~~~~v~~~~p~~YR~r~~~~v~~~~~~~~~~~Gf~~~~s~ 80 (358)
T d1uwva2 1 ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSS 80 (358)
T ss_dssp TBCCCSCTTTTTBTTCSCTTBCHHHHHHHHHHHHHHHHTSCCCEEECCCSSSCBSEEEEEEEEETTTTEEEEEEEBTTSS
T ss_pred CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
T ss_conf 98898999999485861008999999999999999862765676657888777415999845765889569989735884
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~iV~i~~C~i~~~~i~~~l~~lr~~l~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (358)
T d1uwva2 81 DIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAP 160 (358)
T ss_dssp CEEECSCCTTBCHHHHHHHHHHHHHHTTCGGGGGEEEEEEEEETTEEEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 06614125145577999999988754033445520399999831880899995266677789999975311363899940
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~g~~~~~~~~g~~~~i~p~sFfQ~N~~~~e~l~~~v~~~~~~~~~~~vlDLycG~G~fsl~La~~~~~V~gv 240 (358)
T d1uwva2 161 DSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV 240 (358)
T ss_dssp SSSCCEEEECCCCEEEETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEE
T ss_pred CCEEEEEECCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEC
T ss_conf 43367762487248960888999877133003303446779889875246788449995366665521003565279822
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 E~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~l~~~~~~~ivYVSCnp~Tl 320 (358)
T d1uwva2 241 EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL 320 (358)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 47499999999848755324621342204543234455404675599679973479999999974999899992898998
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
-
T Consensus 321 aRDl~~l~~~gy~l~~i~~~D~FP~T~HvE~v~~l~Rv 358 (358)
T d1uwva2 321 ARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRV 358 (358)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC-
T ss_pred HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEEEC
T ss_conf 87799998779767599997359998618999999969
|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase A, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26954.35 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~p~~~~~~~~~~~~~~~~~~~v~~Yy~~W~~y~~~~~~~~I~~~~~THi~YAFa~v~~~~~~~~~~~~~~~~~~ 80 (358)
T d1edqa2 1 TDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQ 80 (358)
T ss_dssp TTCTTSCCCCCCCCTTCCCBCCCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99754688779778889888789998999995952023899992469986797699950772698874654222333222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~LK~~~p~lKvllSiGGw~~s~~~~~~a~~~~R~~ 160 (358)
T d1edqa2 81 ALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDR 160 (358)
T ss_dssp HHHHHTTTCCTTSBCCSCHHHHHTSCBTTBCSTTCSSCHHHHHHHHHHHHCTTCEEEEEEECSSSCGGGGGTTSHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 22224466777615612714432033467664344344289999999974899769999989987888602358789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 Fi~svv~~l~~y~~fDGIDIDWEyP~~~g~~~~~~~~~D~~nf~~Ll~eLR~~l~~~~~~~~~~~~ls~a~~~~~~~~~~ 240 (358)
T d1edqa2 161 FVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDK 240 (358)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECSHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 99999999998353786131124323345778778978998999999999999887643317742025650476445413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~l~~~vD~inlMtYD~~G~w~~~~~g~~t~l~~~~~~~~~~~~v~~~v~~~~~~Gvp~~KlvlGip~YGRs~~~K~ 320 (358)
T d1edqa2 241 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQAKG 320 (358)
T ss_dssp SCHHHHGGGCSEEEEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHH
T ss_conf 21777863378898860245577787887877888887667877652999999999878998896999685479999887
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------9
Q 003615 112 -------------------------------------C 112 (807)
Q Consensus 112 -------------------------------------C 112 (807)
-
T Consensus 321 ~y~~~~~lgG~~~W~~~~D~g~ll~a~~~~l~~~~~~~ 358 (358)
T d1edqa2 321 KYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ 358 (358)
T ss_dssp HHHHHHTCCEEEEECGGGCCSHHHHHHHHHTTCCBSCC
T ss_pred HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 78862897439887156786289999998647854679
|
| >d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26887.09 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~w~Fd~f~l~~~~~~~~L~~~~~~if~~~~l~~~f~i~~~~l~~Fl~~v~~~Y~~~~nPYHN~ 80 (357)
T d1taza_ 1 VGPTYSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKYKNPYHNQ 80 (357)
T ss_dssp CCCCCCHHHHHHHTTTTSTTCCHHHHHHHTTSCHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHHHHTTTCCSSSSH
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99889899999986455699980130101389829999999999878376439899999999999998457789875359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HD~~HpG~~N~flv~s~~~LA~lYnd~SvLEnhH~~~~~~lL~ 160 (357)
T d1taza_ 81 IHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISSVFRLMQ 160 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999635632338999999999999988248899635799863887888639987789999999999980
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~i~~~l~~~~~~~~r~~ii~~ILaTDm~~H~~~l~~~~~~~~~~~~~~r~~~~~~lik~ADis~~~rp~~~~~~W~ 240 (357)
T d1taza_ 161 DDEMNIFINLTKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWT 240 (357)
T ss_dssp SGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTCGGGSCHHHHHHHH
T ss_pred CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 61000103899899999999999998222267689999999999974114109999999998623554236779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~l~~Ef~~Qgd~E~~~gl~~sp~~dr~~~~~~~~QigFi~~iv~Plf~~l~~~~p~~~~p~~~~~~~n~~~~~~~~~~~ 320 (357)
T d1taza_ 241 KALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADEDSKSKNQPSFQWRQP 320 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998899845999987668754320788999999999999999998770653688899999999899987641
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~en~~~~~~~~a~ 357 (357)
T d1taza_ 321 SLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAAS 357 (357)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 2234557876234321314556545438999987439
|
| >d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=100.00 E-value=0 Score=26886.81 Aligned_cols=1 Identities=0% Similarity=-1.722 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~el~~~a~~~~~~GKGilAADeS~gT~~Krl~~iGventEenr~~~R~~l~tsp~~~~ 80 (357)
T d2qapa1 1 MSRVTVLQSQLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQ 80 (357)
T ss_dssp CCEEEEEGGGSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGG
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 96121111037775445847899999999998079986998358998277789876999978999999998847987555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~IsGvILfeeTm~q~~~~g~~~~~ll~~kGIVPgIKVDkGl~~~~~G~~~ek~t~gLD~L~~R~~ey~~~Ga~faKwRsV 160 (357)
T d2qapa1 81 YISGVILHDETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNV 160 (357)
T ss_dssp TEEEEEECHHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEEECHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHC
T ss_conf 44689812898732302799779999847981544247751478789974642625677999877754233300310100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 i~i~~~~ps~~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vte~vl~~~~~~l~~~~V~Leg~lLKp 240 (357)
T d2qapa1 161 YKIQNGTVSESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKP 240 (357)
T ss_dssp ECCBTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 43666775044466568999999999997497631051233224564688899999999999998875314445776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 nMv~~G~~~~~~~~~e~va~~tv~~l~~tvP~~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~lsfSfsRALQ~s~L 320 (357)
T d2qapa1 241 NMVVPGAESGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSAL 320 (357)
T ss_dssp CCCCCCTTSSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
T ss_conf 42224543345688556302356665214797787113147886789999999997424578998589863397608999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
=
T Consensus 321 k~W~g~~env~~aQ~~~~~Ra~~ns~A~~G~y~~~~e 357 (357)
T d2qapa1 321 KAWGGKESGLAAGRRAFLHRARMNSMAQLGKYKRSDD 357 (357)
T ss_dssp HHHTTSGGGHHHHHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9857974639999999999999868986688687789
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=26884.87 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~f~~~~f~l~~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyf 80 (357)
T d2b61a1 1 SVQNVVLFDTQPLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYF 80 (357)
T ss_dssp CCEEEEESSSSCEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCE
T ss_pred CCCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEE
T ss_conf 97428998479825689986589569999623337889988998488776653335678887588712799766777518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 VI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~ 160 (357)
T d2b61a1 81 FISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMD 160 (357)
T ss_dssp EEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99855667766667767889888997776422110689999999999871866488884040788899999874267774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~ 240 (357)
T d2b61a1 161 NIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWG 240 (357)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 33244456433235788878899999828777788755688830689999999886404789999874522234433236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~ 320 (357)
T d2b61a1 241 DYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQ 320 (357)
T ss_dssp CCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 53569999999889887607999999999986632654333338999862699889998477506598999999999986
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~~ 357 (357)
T d2b61a1 321 SGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN 357 (357)
T ss_dssp TTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 6998699997999875554769899999999997359
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=100.00 E-value=0 Score=26882.67 Aligned_cols=1 Identities=100% Similarity=0.935 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lPK~eLH~HL~Gsi~~~~l~~la~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 80 (357)
T d2amxa1 1 EIKFLKKEDVQNIDLNGMSKKERYEIWRRIPKVELHCHLDLTFSAEFFLKWARKYNLQPNMSDDEILDHYLFTKEGKSLA 80 (357)
T ss_dssp SCCCCCHHHHTTCCGGGCCHHHHHHHHHHSCEEECCBBGGGCCCHHHHHHHHHHTTCCTTSCHHHHHHHHCCCSTTCCHH
T ss_pred CCCHHHHCCCCCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHH
T ss_conf 93455522555687000470789999983908898667878999999999999729799999499999874567626599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~f~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~v~y~Elr~~p~~~~~~~g~~~~~v~~~i~~g~~~a~~~~~~~~~~~ 160 (357)
T d2amxa1 81 EFIRKAISVSDLYRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVA 160 (357)
T ss_dssp HHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999878778733899999999999999998415161133454324545676457799999999999987439845898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~a~~~~~~vvGidl~g~e~~~~~~~~~f~~ar~~gl~it~HaGE~~~~~~~~~i~~ai~~l 240 (357)
T d2amxa1 161 LICISDTGHAAASIKHSGDFAIKHKHDFVGFDHGGREIDLKDHKDVYHSVRDHGLHLTVHAGEDATLPNLNTLYTAINIL 240 (357)
T ss_dssp EEEECCCCCSHHHHHTTTHHHHHTTTTEEEEECCSSCCCCGGGHHHHHHHHHTTCEEEEEESCCTTCSSSHHHHHHHHTS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 63210266125557999999996388657312467766623469999999831876443455458999747899999704
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~RIgHGv~~~~d~~l~~~l~~~~I~leiCPtSN~~~~~~~~~~~HP~~~l~~~Gv~v~l~TDDp~~f~t~ls~ey~~~ 320 (357)
T d2amxa1 241 NVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMFLSNINDNYEKL 320 (357)
T ss_dssp CCSEEEECGGGGGCHHHHHHHHHHTCEEEECHHHHHHTTSSSCSTTCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHH
T ss_pred CCCCCCCCHHEECCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHCCCHHHHHHHH
T ss_conf 97313652430058788998887185389887500242358970028999999889959995899412178879999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~ls~~el~~l~~nsi~~sF~~~~~K~~l~~~~~ 357 (357)
T d2amxa1 321 YIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELKALYF 357 (357)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHC
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9981989999999999999986899999999998659
|
| >d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=100.00 E-value=0 Score=26881.75 Aligned_cols=1 Identities=0% Similarity=-1.588 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 M~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~dail~Gai~~p~~~~ 80 (357)
T d1a05a_ 1 MKKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDA 80 (357)
T ss_dssp CCEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTT
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 97899977678669999999999999987708985999997552425441994899999999973065406656887567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~lR~~ldlyanvRP~k~~pg~~~~~pl~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~a~~~~ 160 (357)
T d1a05a_ 81 YPPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVIDGKRRGFNTM 160 (357)
T ss_dssp SCGGGSHHHHHHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEE
T ss_conf 78555666477889975695588777640367666789886667761399987455643357753221267764899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~t~~~~~ri~~~Af~~a~~r~k~vt~v~K~ni~~~~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (357)
T d1a05a_ 161 VYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETTRLWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLT 240 (357)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 96289999999999988645786488885366411368999999999865898278751799999998745456567851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~Av 320 (357)
T d1a05a_ 241 GNMFGDILSDEASQLTGSIGMLPSASLGEGRAMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAV 320 (357)
T ss_dssp CHHHHHHHHHHHHHTTSCGGGCEEEEECSSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 17888878899988735765410300068730102456878000589865949999999999972089879999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
=
T Consensus 321 ~~~i~~g~~T~Dlgg~~t~~~~T~e~~daV~~~l~~~ 357 (357)
T d1a05a_ 321 QRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALNLK 357 (357)
T ss_dssp HHHHHTTCCCGGGCCTTSCCCCHHHHHHHHHHTTTCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 9999769967566999998768999999999987469
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=100.00 E-value=0 Score=26880.84 Aligned_cols=1 Identities=0% Similarity=-1.026 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~p~~~~~~y~~~~G~tG~Gv~VaViDtGvd~~H~dl~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 80 (357)
T d1t1ga_ 1 AAPTAYTPLDVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVE 80 (357)
T ss_dssp CCCEEECHHHHHHHTTCCTTCCCTTCEEEEEESSCCCCHHHHHHHHHHTTCCCCCEEEEESTTCCCCCCSCTTSTHHHHH
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99874789999998787889898897899997688778688987775058878998633799999887876556443005
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~d~~~~~GvAp~A~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~g~~vv~ 160 (357)
T d1t1ga_ 81 LDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLA 160 (357)
T ss_dssp HHHHHHHHHSTTSEEEEEECCSSHHHHHHHHHHHHHCTTTCCSEEEECCCEEGGGSCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 77643125414676998741247884589999998741149808965666576766543489998766532157867999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~p~~~~~~~~~~~~ 240 (357)
T d1t1ga_ 161 AAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSA 240 (357)
T ss_dssp ECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECSSCEEEEEECBCHHHHCBCCCEECSSSCCCGGGTTSCCCCCS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84168743211344544201135776236654023678775445201266666433447744121367523354234556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~~~dit~g 320 (357)
T d1t1ga_ 241 NPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEG 320 (357)
T ss_dssp STTCCCCCEECSEEEECCTTEEEEEEETTEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGGEECCCSC
T ss_pred CCCCCCCCEECCEECCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCC
T ss_conf 67777773313321135787742774699666168831687999999999976405886765999986260133124326
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
=
T Consensus 321 ~~~~~~~~~~~~a~~G~d~~tG~G~~n~~~~~~~l~p 357 (357)
T d1t1ga_ 321 NNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLP 357 (357)
T ss_dssp BCCCSSSSCCSBCCSSSBTTTBTCEECHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 7788888776567668988846741549999874088
|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Fungal peroxidase (ligninase) species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=26880.75 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 a~c~~g~~~~na~cc~~~~v~~dlq~~~~~~~c~~~A~~~lRL~FHDcfv~~~~~g~~~~gGcDgSill~~~~E~~~~~N 80 (357)
T d1yyda1 1 AVCPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSAN 80 (357)
T ss_dssp CBCTTSCBCSCGGGTTHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTTTGGGSGGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 92899753677435467999999999985587507899999999824105103567678999781302178644678665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~Gld~i~~~~~~~~~~~~~VScADiialAardAV~~~~GGP~~~v~~GR~Da~~a~~~~~LP~p~~~~~~l~~~Fa~~~G 160 (357)
T d1yyda1 81 NGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGG 160 (357)
T ss_dssp TTTHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCTTCSCCTTCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88799999999999637998999999999999997306897204248888642234446789864569999999766512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 lt~~dmVaLsGAHTIG~ah~~~~~~~~~~~~~tp~~fDn~~f~~ll~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~L~ 240 (357)
T d1yyda1 161 FTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQ 240 (357)
T ss_dssp CCHHHHHHHGGGGGGCEESSSSTTCSCEESSSCTTSCSSHHHHHHTBCCCBCSSCSCCTTEECBSCCCCBTTBCCCCEEH
T ss_pred CCHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88377611323331000245677754333466656301799999986368988888887601377744440102466248
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 SD~~L~~D~~T~~~V~~yA~n~~~F~~~Fa~AmvKms~lG~~~~~l~dcs~v~p~~~~~~~~~~~~p~~~~~~d~~~~~~ 320 (357)
T d1yyda1 241 SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNSLIDCSDVVPVPKPATGQPAMFPASTGPQDLELSCP 320 (357)
T ss_dssp HHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHTTTTSCGGGSEECGGGSCCCCCCCCCCCCBCTTCCGGGBCCCCT
T ss_pred HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 99988419889999999965999999999999999997699953144577657899887788876789998676553055
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (357)
T d1yyda1 321 SERFPTLTTQPGASQSLIAHCPDGSMSCPGVQFNGPA 357 (357)
T ss_dssp TSCCCCCCBCSCSSCCCCCSSTTSCSCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999887789985334457899877689756678999
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=100.00 E-value=0 Score=26880.19 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~g~~~~~~~f~w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~ 80 (357)
T d1gcya2 1 DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFW 80 (357)
T ss_dssp CCCCCCTTCCCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCH
T ss_conf 95556898605358987788624468788777747999999789999739999996947547866777777888788470
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T d1gcya2 81 HDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGD 160 (357)
T ss_dssp SSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTST
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30656866799999999999999638737898700354788875100465688765456677778888878555445665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~dln~~np~v~~~~~~~~~~~~~~~giDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T d1gcya2 161 ADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQ 240 (357)
T ss_dssp TBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSCTTSGGGGSCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf 54477987999999999998777528987999515308999999998501788234543225763011011210110456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~~~~~la~a 320 (357)
T d1gcya2 241 IIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYA 320 (357)
T ss_dssp HHHHHHHHHTSCEECHHHHHHHHHSCGGGGGGSGGGCSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66767640344310035554300456999999985076656645257740477755424457864334287999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 lllt~pGiP~IyyGde~d~g~~d~i~~li~iRk~~~i 357 (357)
T d1gcya2 321 YILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGV 357 (357)
T ss_dssp HHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9995799127970785467886999999999976879
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Probab=100.00 E-value=0 Score=26878.73 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~y~~ 80 (357)
T d1mppa_ 1 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 80 (357)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CCCCCCCEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 95445525458798899999982899599999948975428714899998553589878874587622679445886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 g~~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 160 (357)
T d1mppa_ 81 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 160 (357)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred CCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 71789998350212660488688999994045423215655433211235545776422244688788789999861565
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ilDSGts~~~ 240 (357)
T d1mppa_ 161 SSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFI 240 (357)
T ss_dssp SSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEE
T ss_pred CCCEEEEEECCCCCCCEEECCCCCHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCEEEEECCCCCCEEEECCCCCCC
T ss_conf 55169998336899963987531766727730578721477874368998706998875765328973148613674236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 lp~~~~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~c~~~~~~~~ 320 (357)
T d1mppa_ 241 APSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG 320 (357)
T ss_dssp EEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEECHHHEEEEECCCCCEEEEEECCCC
T ss_conf 98999999999856775346885102420144568507999811565356679998659928996589988999984799
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~ 357 (357)
T d1mppa_ 321 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND 357 (357)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred CCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 9999945697397999998999999999998678998
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=0 Score=26878.34 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~p~~a~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~ 80 (357)
T d1g01a_ 1 PAGMQAVKSPSEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGY 80 (357)
T ss_dssp CTTCTTCCCHHHHCSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSST
T ss_pred CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 98544567965346788599738589999999999999885676200465568999999998649977988636557887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~ 160 (357)
T d1g01a_ 81 ATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGP 160 (357)
T ss_dssp TTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTSGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 44989999999999999978988998613268888880355666779999999975476237999987516353567654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~ 240 (357)
T d1g01a_ 161 GLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSS 240 (357)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 56676136899999999999999853993499804876665200013557999779998872675677667777566447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~isw~~W~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T d1g01a_ 241 ERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNKNEISGAFTPFELGRTDAT 320 (357)
T ss_dssp GCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCHHHHHHHHHHHHHTTCCEEEEEECCSSSTTCSBCCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78999999999997699889983377678887876789999999999974993589957588776433067665566754
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~w~~~~l~~sG~~v~~~l~g~~~~~~~~~ 357 (357)
T d1g01a_ 321 DLDPGANQVWAPEELSLSGEYVRARIKGIEYTPIDRT 357 (357)
T ss_dssp CSSCCTTCCCCGGGBCHHHHHHHHHHHTCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 5566667888765615467999998536778885789
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26877.36 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC
T ss_conf 98899968886899999999997869899997897555556688887403303897599982067979988887525987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89985203553446559999999999999999999998489988689999845651889888958999999988699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCEEECHHHHHHHHHH
T ss_conf 99999999999996997899996454599877677714789999999838972699799980444443044878999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred HCCCCCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 27899759978998164599999999983976321455331000233211222433566760376155357886446404
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------9
Q 003615 112 ------------------------------------C 112 (807)
Q Consensus 112 ------------------------------------C 112 (807)
-
T Consensus 321 ~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~kk~~ 357 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (357)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 4889999997998689899999999999999970129
|
| >d16vpa_ d.180.1.1 (A:) Conserved core of transcriptional regulatory protein vp16 {Herpes simplex virus type 1 [TaxId: 10298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Conserved core of transcriptional regulatory protein vp16 superfamily: Conserved core of transcriptional regulatory protein vp16 family: Conserved core of transcriptional regulatory protein vp16 domain: Conserved core of transcriptional regulatory protein vp16 species: Herpes simplex virus type 1 [TaxId: 10298]
Probab=100.00 E-value=0 Score=26815.99 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~r~psPp~~~sp~~Ly~rLl~eL~F~eGp~Lls~le~wNeDLFSclP~n~dLY~~~~~LSt~~~eVi~~~~~~~p~~~~i 80 (356)
T d16vpa_ 1 SRMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSALPTNADLYRECKFLSTLPSDVVEWGDAYVPERTQI 80 (356)
T ss_dssp CCSCCCCCCCCHHHHHHHHHHHHTCTTHHHHHHHHHHCCCCCSTTSCCCGGGGTTCGGGCSCHHHHHHHHHHCCCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf 99998988789799999999873998517899999984205550377874676531055389899999876179987750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 dL~ahG~~~~P~~Pa~~eeLP~Yv~avq~fF~sELrAREe~Y~~Ll~~YC~AL~~yLr~sa~~~~r~~~~~~~~~~~~~~ 160 (356)
T d16vpa_ 81 DIRAHGDVAFPTLPATRDGLGLYYEALSRFFHAELRAREESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRDRDLGEM 160 (356)
T ss_dssp CTTCCCSSCCCCCCSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 01478998899999882353899999999999999998999999999999999999999887751310344541679999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~rq~i~~rYYRE~arLArllylHLYls~tRevswrl~A~Q~~~q~vF~~L~y~W~q~RQf~ClFhPvlfnhGvV~leg~p 240 (356)
T d16vpa_ 161 LRATIADRYYRETARLARVLFLHLYLFLTREILWAAYAEQMMRPDLFDCLCCDLESWRQLAGLFQPFMFVNGALTVRGVP 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEESCSHHHHSSCCSCSBCCSEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCEEEECCEEEECCCC
T ss_conf 99999999999999999999999999999999999999986132634605740113432367535335417635667987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 L~a~~Lr~~Ny~R~eLGLPlvR~~lvEE~~~pL~~~P~fs~~~pRssGyl~~~IraKmeaYS~~hp~~~~~~~~dH~YaR 320 (356)
T d16vpa_ 241 IEARRLRELNHIREHLNLPLVRSAATEEPGAPLTTPPTLHGNQARASGYFMVLIRAKLDSYSSFTTSPSEAVMREHAYSR 320 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCTTTSCTTSCSCCCCCCCTTSCCHHHHHHHHHHHHHTSTTC-----------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 88899988889998718840110100468987425886556785305689999999864420368888875444576447
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 ~~~~~nYGst~eaml~~~~~~~p~~~~~~~~r~~~~ 356 (356)
T d16vpa_ 321 APTKNNYGSTIEGLLDLPDDDAPEEAGLAAPRLSFL 356 (356)
T ss_dssp ----------------------------CCCEEEEC
T ss_pred CCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 888888773232101699999635532234321359
|
| >d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Uroporphyrinogen decarboxylase, UROD domain: Uroporphyrinogen decarboxylase, UROD species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26807.72 Aligned_cols=1 Identities=0% Similarity=-2.088 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~ne~~l~al~g~~~dr~PVw~MrqAGRylpey~~~r~~~~f~e~~~~pe~~ae~tl~p~~~~~~DaaiifsDil~~ 80 (356)
T d1r3sa_ 1 FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVV 80 (356)
T ss_dssp CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTSCHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCTTHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 99764489999975998999998888445425889999871289999855999999998448986795425622442101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~ealG~~v~f~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~l~~v~eai~~~~~~l~~~~pliGf~ggP~Tla~yli~~~~ 160 (356)
T d1r3sa_ 81 PQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGG 160 (356)
T ss_dssp HHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSC
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC
T ss_conf 34228635644889866776433202332101100002144899999999998735565663032031888999872134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~pe~~~~ll~~lt~~~~~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 240 (356)
T d1r3sa_ 161 SSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 240 (356)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 21378898876303577889999999988999999860566540203520121357888888899999999999875101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~i~~~~~~~~~l~~~~~~g~d~is~D~~~~l~~~~~~~~~~i~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~ 320 (356)
T d1r3sa_ 241 AGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGP 320 (356)
T ss_dssp TTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 24777302101044787888874248561254235799999998489832882888899859999999999999998189
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
=
T Consensus 321 ~~~I~nlGhGI~p~tp~env~a~v~~vr~~~k~~~~ 356 (356)
T d1r3sa_ 321 HRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ 356 (356)
T ss_dssp SSEEEEESSCCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCC
T ss_conf 994896999759899999999999999996887459
|
| >d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=100.00 E-value=0 Score=26805.74 Aligned_cols=1 Identities=0% Similarity=-1.587 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~w~~~~~g~ee~~~~~l~spp~g~~l~s~~gd~~gf~~~dl~~p~~~~~~p~~~~~~~id~a~~~p~~ivr~G~~~~ 80 (356)
T d2ebsa2 1 WAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGNISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGH 80 (356)
T ss_dssp CCCCEEECCTTCBCCBEEEEECCSSSSSEEEEESSSBCBEESCTTSCCCBCCSSCCSEEEEEEECSSCTTCEEEEEECCC
T ss_pred CCCCCEECCCCEEHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHEEEHHHCCCEEEEEECCCC
T ss_conf 99854576578010000015758999810688864785597458887535268885640120104118956999967788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~StDgG~TW~~~~~~~~g~~~~~~~~g~ia~s~dg~~ivw~~~~~~~~~gv~~StD~G~TW~~~~~~~~~ 160 (356)
T d2ebsa2 81 EYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKA 160 (356)
T ss_dssp CBTTBCTTEEEESSSSSSEEECSCCCTTCSTTCCSCCEEEECTTSCCEEEECCCTTCCSCCEEESSTTSCCBCCEESCCS
T ss_pred CCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCEEECCCCCCC
T ss_conf 78888872799840522442787688886566446646999458993078731467886449970797113876777888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~i~~d~~~~~~~Ya~~~g~ly~StDgG~TW~~~~~~~~~~~~~~~~v~p~~~g~v~v~~~~~Gl~~StDgG~TWt~i 240 (356)
T d2ebsa2 161 QTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRV 240 (356)
T ss_dssp CCSCEEECSSSTTCEEEEETTEEEEESSTTSEEEECCBTCCCCCCCCCEECTTSTTCEEEEETTTEEEEESSTTSBCEEE
T ss_pred CCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEC
T ss_conf 73189996767965785046319994787654532256775454036888741699502112445259922776348981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~g~~~~~~~~GvyrS~D~G~TW~~Ind~~~~~g~~~~i~~Dp~~~grvYv 320 (356)
T d2ebsa2 241 GTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYL 320 (356)
T ss_dssp SSCEEEEEEEEEEC---------CCEEEEEEEESSTTSCSEEEEESSTTSSCEECCCTTSCTTCEEEEEECTTSTTCEEE
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEE
T ss_conf 47888764013333566454678875599999864798076999969997934995997777752289718976998999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
.
T Consensus 321 gT~GrGi~y~~~~~~~s~~~~~~~~~~~~~~~~~~~ 356 (356)
T d2ebsa2 321 GTNGRGIVYADLTNKKSNEEKSTAKCANGQKGTHCY 356 (356)
T ss_dssp EEBSSCEEEEECCC----CCCCEEEETTCCSSSCCC
T ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 968876799967788577887420127888887679
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=100.00 E-value=0 Score=26806.28 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
-
T Consensus 1 ~~~~~~~~~~~~~g~~g~~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G~TWs~~~~v~~~~~~~~~ 80 (356)
T d1w8oa3 1 GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI 80 (356)
T ss_dssp CCCCEEEEEEEETTSTTCSCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEEEECCBCSSSC
T ss_pred CCCCCCEEECCCCCCCCCEEEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 99741200110057688383670789998999999999646489988887329999906899787788873238887764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~v~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1w8oa3 81 KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS 160 (356)
T ss_dssp BEEEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECGGGSCCSTTCCEEEECS
T ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34466248996899839999964035774443336787787479999983687652104652056655434432123466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 240 (356)
T d1w8oa3 161 GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV 240 (356)
T ss_dssp EECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEE
T ss_pred CCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 32046000244664045553012236632577752688752001446675543316899257620255642555540577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~S~D~G~tw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~~S~D~G~tW~~~~~i~~~ 320 (356)
T d1w8oa3 241 AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG 320 (356)
T ss_dssp EEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCEECCC
T ss_conf 88426887543022014335788787326743665346789809999799998897316999990799155886081799
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 ~~~Ys~~~~~~dg~i~~~ye~g~~~~~~~~~l~~~~ 356 (356)
T d1w8oa3 321 SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAWLG 356 (356)
T ss_dssp ECCCEEEEECTTSCEEEEECCSSEEEEEEECHHHHT
T ss_pred CCCCCEEEECCCCEEEEEEECCCCCEEEEEEHHHCC
T ss_conf 976863689589989999988997389996289979
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=26804.79 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~e~DVlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~~~gg~s~~~g~~~~~~~~~~~~ 80 (356)
T d1jnra2 1 VYYPKKYELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTG 80 (356)
T ss_dssp CCCCSSCCCCCGGGSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSS
T ss_pred CCCCCCHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 97775033213556776687649899898889999999999978867697999967889997359877899974233323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~Ds~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1jnra2 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAA 160 (356)
T ss_dssp SBSCCCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 56766899999999998606876188999988741123556876097742013323322333100246640788999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~i~~~~~~~~l~~~~~~~~~v~~~~~~~~~~G~~~~i~Ak~VILATGG~~~~~~~~~~~~~~~~~~~~~~~tG 240 (356)
T d1jnra2 161 KMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTG 240 (356)
T ss_dssp HHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBS
T ss_pred HHHHCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86304517899999887653024665214568877404837984078799917875331357777644564447987577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 dG~~ma~~aGa~l~~~~~~q~~p~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~~~~~~g~rf~~~~~~~g~~a~~~~~~~ 320 (356)
T d1jnra2 241 SGYYMGLKAGAMLTQAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRF 320 (356)
T ss_dssp HHHHHHHHHTCCEESCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 09999998534524787247616645782432456567664004352121420017766557355655412328999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
.
T Consensus 321 i~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~~~~~ 356 (356)
T d1jnra2 321 ILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLS 356 (356)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 972899887788999999988776899998507999
|
| >d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Bacillus coagulans [TaxId: 1398]
Probab=100.00 E-value=0 Score=26804.78 Aligned_cols=1 Identities=0% Similarity=-1.256 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 m~~rI~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~et~e~i~~~dail~Gav~~p~~~ 80 (356)
T d1v53a1 1 MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAGTPLPEETLDICRRSDAILLGAVGGPKWD 80 (356)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHTTSSCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 97079998878765999999999999998624997499999556899997499288999999986082799256798867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~lR~~ldlyanvRPv~~~~gi~~~~p~~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~~~~~ 160 (356)
T d1v53a1 81 HNPASLRPEKGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERRGPGENEVVDTL 160 (356)
T ss_dssp SSCGGGCHHHHHHHHHHHHTCCEEEEEEECCGGGTTTSSBCHHHHTTCEEEEEEECSSBTTTCSCEEEESSTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCCC
T ss_conf 78988583021689998708725566665430344579977667788239996046766065305330224652002200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~t~~~~~ri~r~af~~A~~r~kkVt~v~K~nv~~~~~~~~~~~~eva~eyp~I~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (356)
T d1v53a1 161 AYTREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVDSTSMQLIANPGQFDVIVT 240 (356)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCEEEC
T ss_conf 02321430034577767874598465775254102450586999999836898699998836678898722344664532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~A 320 (356)
T d1v53a1 241 ENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKA 320 (356)
T ss_dssp CHHHHHHHHHHHTTTTSCTTSCEEEEECSSSCEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 67888888899988736763111200268731463378887234448996592999999999998637987999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 v~~~l~~g~~T~Dl~~~~gg~~~T~e~~dav~~~L~ 356 (356)
T d1v53a1 321 VDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKLN 356 (356)
T ss_dssp HHHHHHTTEESSSSCCTTCEECCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHCC
T ss_conf 999998599473556679970379999999998429
|
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26804.77 Aligned_cols=1 Identities=0% Similarity=-0.859 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa~~l 80 (356)
T d1lbqa_ 1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 80 (356)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99659999878899986899999999758986446878899998656475687999999998189881089999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~~~~ 160 (356)
T d1lbqa_ 81 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 160 (356)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 98850233435772168873146320888999998579864378844234427888899999999988750102566426
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~~gdpY~~q~~~t~~~v~~~l~~~~~~~~~fQS 240 (356)
T d1lbqa_ 161 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVWQS 240 (356)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 44644312279999999999999767544567379995477653333327874689999999876430566645777640
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 r~g~~~WL~P~t~~~le~l~~g~k~v~v~p~gFvsD~lETL~Eidie~~~~~~gg~~f~~vp~lN~~p~fi~~La~lV~~ 320 (356)
T d1lbqa_ 241 QVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDKFKRCESLNGNQTFIEGMADLVKS 320 (356)
T ss_dssp CCSSSCBCSCBHHHHHHHHGGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGGEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 45677777875599999840489748998885242234449887777999971887499868998998999999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
=
T Consensus 321 ~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1lbqa_ 321 HLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 356 (356)
T ss_dssp HHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 865685567446644334768871118698616899
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=100.00 E-value=0 Score=26804.67 Aligned_cols=1 Identities=0% Similarity=-1.059 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~p~~~~~~~~~~~~~~~~~Rl~~R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~eg~~~~~~ 80 (356)
T d1l0wa3 1 TPPFPVDAGWRGEEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLV 80 (356)
T ss_dssp CCSSCCSSGGGTCCCCCCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHH
T ss_conf 96962685445654456698887413365117887999999999999999999988898999898124677764432002
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~yL~~Spel~lk~ll~~g~~~Vf~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~~~~~m~~~E~li~~v~~~ 160 (356)
T d1l0wa3 81 PYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFRE 160 (356)
T ss_dssp ECTTSTTEEEECCSCSHHHHHHHHHTTCSEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22113201117772856777775232368679982123522268754045668877666788878999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~f~r~~~~~a~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~ 240 (356)
T d1l0wa3 161 ALGVELPLPFPRLSYEEAMERYGSDKPDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 240 (356)
T ss_dssp HTCCCCCSSCCEEEHHHHHHHHSSSSCCCSCCSCCEEEEECCBSBCCCTTTSCCCBSSCTTBCBCSTTTTHHHHCGGGCB
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEEECCCCCCCHHHHCHHHCCCCCCE
T ss_conf 72877778977511776677870474767777566542036653113110012233437743687665100103888620
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 a~~FdL~~~G~ElanG~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~yl~a~~~G~PP~~G~glGldRLlm~l~g~~~Ird 320 (356)
T d1l0wa3 241 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIRE 320 (356)
T ss_dssp BSEEEEEETTEEEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTCCCEEEEEEEHHHHHHHHHTCSSGGG
T ss_pred EEEEECCCCCEEEECCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHH
T ss_conf 21230233878862107871748999999999767832357789999999667989962377709999999809995885
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 vi~FPR~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1l0wa3 321 VIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP 356 (356)
T ss_dssp GSSSCCCTTSCBTTTTBSEECCHHHHHHHTEEECCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCC
T ss_conf 346899999998667899989999998668462185
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=0 Score=26804.18 Aligned_cols=1 Identities=0% Similarity=-1.822 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~ 80 (356)
T d1rkxa_ 1 INNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQP 80 (356)
T ss_dssp CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHH
T ss_conf 97344188989997888779999999999779989999789986177776640146876998405685760023430202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44444421565653246775353322334035666643045543222222212234565433322234568988432432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a 240 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCH
T ss_conf 33204566776521342010355733774267776488855143799999999718996688621342122123342200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~ 320 (356)
T d1rkxa_ 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWN 320 (356)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHHHHHHHCCCCCCC
T ss_conf 23455540345654444332222223322110245666787489862797179999875765686999999879986888
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
=
T Consensus 321 l~egi~~ti~wyk~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1rkxa_ 321 LNTTLEYIVGWHKNWLSGTDMHEYSITEINNYMNTK 356 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 999999999999998748998998999999971589
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=100.00 E-value=0 Score=26803.76 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 f~~RG~mlD~aR~f~~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~i 80 (356)
T d1jaka1 1 YAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEI 80 (356)
T ss_dssp CSEEEEEEECSSSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98438678767998599999999999998299079999864887610016873465436756667788885289999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 v~ya~~rgI~viPEid~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~Hi 160 (356)
T d1jaka1 81 VRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHI 160 (356)
T ss_dssp HHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEEC
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999729868644777304679987584002568998644466778865566856789999999999987515507986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 GgDE~~~~~~~~~~~f~~~~~~~v~~~gk~~~~W~e~~~~~~~~~~vV~~W~~~~~~~~~~~~~~~~~~~G~~vI~s~~~ 240 (356)
T d1jaka1 161 GGDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGAEPVEGALVQYWGLDRTGDAEKAEVAEAARNGTGLILSPAD 240 (356)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEGGGGGSCCCTTCEEEECCCTTSCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 00244444078999999999999998599458740013678988867887730356763267999999809969977870
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~Yld~~~~~~~~~~~~w~~~~~~~~~y~~~P~~~~~~~~~~~ilG~e~~lWtE~i~~~~~~~~~~~PR~~AlAEr~Ws~ 320 (356)
T d1jaka1 241 RTYLDMKYTKDTPLGLSWAGYVEVQRSYDWDPAGYLPGAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSP 320 (356)
T ss_dssp TTCTTBCSSTTCSSSBCTTCCCCHHHHHSCCGGGSSTTCCGGGEEEEEEEECCTTCCSHHHHHHHHTTHHHHHHHHHHSC
T ss_pred HHEECCCCCCCCCCCCCCCCEEEHHHEEECCCCCCCCCCCHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 12020366789987753345122311450366567874521056478855054777998999988775599999998688
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 ~~~~d~~~f~~RL~~~~~~l~~~Gv~y~r~p~~pw~ 356 (356)
T d1jaka1 321 ASTHDWDTYKVRLAAQAPYWEAAGIDFYRSPQVPWT 356 (356)
T ss_dssp GGGCCHHHHHHHHHTTHHHHHHHTCCCCCCTTSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 867999999999999999999779980679999999
|
| >d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=26803.09 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~ad~~r~i~i~aNi~~~~e~~~a~~~gadGVGL~RtEflfl~~~~~~~~~~~~i~~p~~ee~~~~~~~~~~ 80 (356)
T d1vbga1 1 SGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLP 80 (356)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCCSEEEEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 93488999987537764899858999999999847997171777888741886304678987629999999999998788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~q~~~y~~i~~~~~g~pvtiRtlD~~~dk~lp~~~~~~~~~~l~~~~g~dk~~~~~~~~~~~E~NP~LG~RGiR~~l~~p 160 (356)
T d1vbga1 81 YQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYP 160 (356)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSCGGGGSCCSCHHHHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHCEEEEECHHHH
T ss_conf 78999999999748996699984278776676630567999999871998024554321334688432020455010211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~f~~ql~Ail~A~~~~~~~~~~~~~~IMiPmV~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iGiMiEvPsaal~~d~ 240 (356)
T d1vbga1 161 ELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADE 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 21357899999898744545756536550058763999999998887757888873066667435552357289997999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~DF~SIGTNDLtQytla~DRdn~~~~~~~y~~~~~~~~dp~~pav~~~i~~lI~~a~~~~k~~~~~i~vsiCGE~a 320 (356)
T d1vbga1 241 IAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG 320 (356)
T ss_dssp HTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG
T ss_pred HHHEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 96567899953038999999861310000026888630122587547789999999999999988507999699706434
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 sdp~~~~~L~~lGi~~iS~sp~~ip~~k~a~aq~~~ 356 (356)
T d1vbga1 321 GEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV 356 (356)
T ss_dssp GSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCC
T ss_conf 799999999987999899890778999999977509
|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26802.55 Aligned_cols=1 Identities=0% Similarity=-0.691 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~yy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lTHi~yaFa~i~~~g~~~~~~~~~~~~~~~~~~~~~~lK 80 (356)
T d1goia2 1 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALK 80 (356)
T ss_dssp CCCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTSSEECCTTCCHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 98579999867745767624467766776720088404752994999879977996488258765267788999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~p~lKvllSiGGW~~s~~~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~ygfDGIDIDWE~P~~~~~~~~~~l~~el~ 160 (356)
T d1goia2 81 AHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIR 160 (356)
T ss_dssp GGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 87889869999837767788765543067885899999999999999999829982446420135444455336899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~w~~~tg~~spLy~~~~~p~~~~~ 240 (356)
T d1goia2 161 TLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNA 240 (356)
T ss_dssp HHHHHHHHHTTCTTSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTSSSCCCTTCSSBCTTSCCBCCG
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 98778888746545543058840577777752104799863215746787302367888887887745477889733212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~vsydd~~Si~~K~~y~~~~~LgGv~iW~l~~Dd~ 320 (356)
T d1goia2 241 LREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320 (356)
T ss_dssp GGGSSCCCCHHHHHHHCCSSBCCCHHHHHHHHHTSTTCCGGGEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECGGGSCT
T ss_pred CCCCCCCCCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 55444566765456566887522225899977986599843405882149999999999999957998999981488899
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------9
Q 003615 112 -----------------------------------C 112 (807)
Q Consensus 112 -----------------------------------C 112 (807)
-
T Consensus 321 ~gsLl~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1goia2 321 NGDLLAALDRYFNAADYDDSQLDMGTGLRYTGVGPG 356 (356)
T ss_dssp TCHHHHHHHHHHHCTTCCCTTCCCCSCBCCCCCCTT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 967999987762687899653506788154178999
|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Gentisate 1,2-dioxygenase-like domain: Gentisate 1,2-dioxygenase species: Silicibacter pomeroyi [TaxId: 89184]
Probab=100.00 E-value=0 Score=26732.82 Aligned_cols=1 Identities=0% Similarity=0.304 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~plw~~~~~~~p~~p~~~~~p~~w~~~~~~~~l~~~~~~~~~~~~~rr~~~l~np~~~~~~~ 80 (355)
T d3bu7a1 1 RDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVLRAIDLVRPEDAGRRVVYLRNPQRKDVSA 80 (355)
T ss_dssp CCCHHHHHHHHHHHHTTCCCGGGSCGGGSCSSCCCSSCCCEECHHHHHHHHHHHHHHSCSSCSSCCCEECCCGGGGGGTC
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCC
T ss_conf 98578999999998768945110046778999998862216009999999998741168311770599960798778777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~t~~l~~~~q~l~PGe~~~~HrH~~~~~~~vi~G~g~~t~v~ge~~~~~~GD~~~~P~~~~H~h~n~~~~~~~~~l~~~D 160 (355)
T d3bu7a1 81 ACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 160 (355)
T ss_dssp SBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCCHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECC
T ss_conf 67204532076689983730115442048999898079989998877667999995899528622478997489998125
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~Pl~~~l~~~f~e~~p~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~~~sp~~~ypw~~~~~al~~~~~~~~~~~~~g~~ 240 (355)
T d3bu7a1 161 IPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI 240 (355)
T ss_dssp HHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEE
T ss_pred HHHHHHCCCEECCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
T ss_conf 67876326300125840014555787602455344565443456776668533366442167789898547888778559
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 l~y~nP~tg~~~~~ti~~~~~~l~pG~~~~~hrH~~~~v~~v~~G~g~~~i~g~~~~~~~GDv~~vP~~~~h~~~N~s~~ 320 (355)
T d3bu7a1 241 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQER 320 (355)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSS
T ss_pred EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEEECCCEEEECCCCCEEEECCCCC
T ss_conf 99646655577752016789997899705883735707999997849999999998862899899499984785558998
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
.
T Consensus 321 e~~~Lf~~~D~P~~~~Lg~~~e~~~~~~~~~q~~~ 355 (355)
T d3bu7a1 321 DDACLFSFNDFPVMEKLGFWAEQALEDNGGHQIVA 355 (355)
T ss_dssp CCEEEEEEESHHHHHHTTCCCEEECCSTTTCCCCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 86899995475999876167775411047976569
|
| >d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FucI/AraA N-terminal and middle domains superfamily: FucI/AraA N-terminal and middle domains family: L-fucose isomerase, N-terminal and second domains domain: L-fucose isomerase, N-terminal and second domains species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26732.01 Aligned_cols=1 Identities=0% Similarity=-0.824 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~pkiGirp~~Dgr~~~~re~le~~t~~~ak~~a~~l~~~l~~~~g~~ve~V~~d~~i~~~~eA~~~aekf~~~~v 80 (355)
T d1fuia2 1 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNV 80 (355)
T ss_dssp CCSCSCCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTE
T ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 98678980677853356504432038999999999999999987412689976999467516886999999999866598
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 d~~i~v~p~w~~~~~~~~~~~~~p~~vw~fn~~erpG~vgl~a~~aa~~q~Gip~~~iyg~~vqd~~d~~~p~dv~ekll 160 (355)
T d1fuia2 81 GLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL 160 (355)
T ss_dssp EEEEEEESSCCCHHHHSCCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEEECSSCCCTTCCCCCHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77999825546615545314799866882689999868999999999986598734760776668754226699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~faRAa~av~~Lrg~~ig~iG~~~mGm~~~~~d~~~l~~~fGi~ve~iDm~El~rr~e~~i~D~eEv~~Al~w~k~~~~~ 240 (355)
T d1fuia2 161 RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY 240 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCSTTCGGGSCCHHHHHHHHCCEEEEECTHHHHHHHHTTCSCHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999998658927887785677441257999999983995278759999999974689999999999999973302
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 g~d~n~~~~~~~~~~~~e~~e~~vkm~~~~rdlm~~n~~l~~~~~~ee~~g~~aia~gfqgqr~wtd~~p~~d~~ea~LN 320 (355)
T d1fuia2 241 GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILN 320 (355)
T ss_dssp CCCCSCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHTTCHHHHTCCCEEEEEECCTTTTTTTSCCSHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHC
T ss_conf 41357512477776759899999999999999985081034414157656888425531245202103655107899857
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
-
T Consensus 321 s~~dwnG~rep~~~AtE~D~~~altMl~~~lLTgt 355 (355)
T d1fuia2 321 SSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGT 355 (355)
T ss_dssp SSEETTEECCCCCEEETTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 84444787686336633340108999999875089
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26729.60 Aligned_cols=1 Identities=0% Similarity=-1.920 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRg 80 (355)
T d1jbqa_ 1 WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRI 80 (355)
T ss_dssp CCCTTSCCCCCCCTTSCGGGCCSCCCCCCCCCSEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 98899998865548986888997666776556410318775489973788643277599977999977889755979999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 a~~~i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~ 160 (355)
T d1jbqa_ 81 SLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPES 160 (355)
T ss_dssp HHHHHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
T ss_conf 99999999972886667669972555400488999986257708996123168899999844976999216643101555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 161 HVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 34699999973356513444576532001005650034441389998568622587037788888752487536986325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~gs~~~~~~~~~~~~~~~~~i~gi~~~~~~~~~~~~~~~~~~~v~D~ea~~~~~~L~~~eGi~vepSsaa~laa~l~~~~ 320 (355)
T d1jbqa_ 241 EGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ 320 (355)
T ss_dssp TTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
T ss_conf 67720133333322334522355456620111100120220358989999999999998095982899999999999977
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
-
T Consensus 321 ~~~~g~~VVvvlcd~G~kY~s~~~~d~~~~~~~~~ 355 (355)
T d1jbqa_ 321 ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL 355 (355)
T ss_dssp GCCTTCEEEEEECBBGGGGTTTTTCHHHHHHTTCC
T ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 60896989999777976235642689999877899
|
| >d1luca_ c.1.16.1 (A:) Bacterial luciferase alpha chain, LuxA {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Bacterial luciferase (alkanal monooxygenase) domain: Bacterial luciferase alpha chain, LuxA species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=0 Score=26728.96 Aligned_cols=1 Identities=0% Similarity=-1.455 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 M~fg~f~~~~~~~~~~~~~~~~~~~~~a~~ae~~Gf~~~~~~ehh~~~~~~~~~p~~~~a~~a~~T~~I~lgt~v~~~~~ 80 (355)
T d1luca_ 1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPT 80 (355)
T ss_dssp CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEECCCCSBTTBCCSCHHHHHHHHHHHCSSCEEEEEEEEGGG
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 91357668879999799999999999999999879989996235788877767999999999996791068542367887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~P~~~A~~~atLd~ls~GR~~lGig~G~~~~~~~~~G~~~~~~~~~~~E~~~il~~l~~~~~~~~~G~~~~~~~~~~~P 160 (355)
T d1luca_ 81 AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNP 160 (355)
T ss_dssp SCHHHHHHHHHHHHHHHTSCEEEEEECCCCHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHSEEEEESSSCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 65999999998887626997146542034300343210121001101578888887520243322222344444322366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~p~q~~~~Pi~~a~~sp~~~~~Aa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~v~~~~e~A~ 240 (355)
T d1luca_ 161 SAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAK 240 (355)
T ss_dssp CCSSTTSSCEEECCCSHHHHHHHHHTTCCBEECSSSCHHHHHHHHHHHHHHHHHTTCCGGGCCCEEEEECEECSSHHHHH
T ss_pred CCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 43567888620120322789999985067644354203331127899999887622454333210010011467799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~v~~~l~~~~e~~Gv 320 (355)
T d1luca_ 241 DICRNFLGHWYDSYVNATKIFDDSDQTKGYDFNKGQWRDFVLKGHKDTNRRIDYSYEINPVGTPEECIAIIQQDIDATGI 320 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----------------------------CCSGGGGGSSEESHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCC
T ss_conf 99999999999986421013576132125421102344555403501678887427741564899999999999997599
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
=
T Consensus 321 d~~~l~~~~~~~~~~~~~sl~lfae~V~P~lr~~~ 355 (355)
T d1luca_ 321 DNICCGFEANGSEEEIIASMKLFQSDVMPYLKEKQ 355 (355)
T ss_dssp CEEEEECGGGCSHHHHHHHHHHHHHHTGGGCCCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 97999788999999999999999984101124899
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26728.12 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80 (355)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCEEEEECCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99879995894045337759988962175859999999999989999998823369799999999999998648987648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl 160 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99897025643457626999841446778765038999999999999999998865221124567763211365443132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 240 (355)
T d2b1pa1 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_dssp CCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ECHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 01023211466655332214655558133147777877433356625789865989988897788999999720589879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~ 320 (355)
T d2b1pa1 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320 (355)
T ss_dssp HHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 99876566777764175435666421264333543210133379999999999876994579089999669420878881
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (355)
T d2b1pa1 321 AEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355 (355)
T ss_dssp HHHTCCCC-------CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
T ss_conf 00458999877702332415999999999998629
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=26726.38 Aligned_cols=1 Identities=0% Similarity=0.239 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 99717476589999999982664777671999999999499999899998569948999999996777642015899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058740473069963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 240 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 240 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
T ss_conf 69993899989998347873799962433300011061021538997388746998299996589907998445784412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~ 320 (355)
T d2bbkh_ 241 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 320 (355)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET
T ss_pred EEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 68543303510899980799767887406871265179975999867888498996689987799992899969999978
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
-
T Consensus 321 ~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp TTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCC
T ss_conf 99989999999998999992869796589969999
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26726.25 Aligned_cols=1 Identities=0% Similarity=-1.258 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~~p~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~ 80 (355)
T d1nexb2 1 FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 80 (355)
T ss_dssp CCCEEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEE
T ss_pred CCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCC
T ss_conf 98875888983788699999889999999189909999899993999997899988999986999999996452443211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEEC
T ss_conf 11111111110011111111111112322045543888689998567730012465200010000011234012101100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 240 (355)
T d1nexb2 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC
T ss_conf 22210000256334421144204443013110001100012332111111210021012456368763012211111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 ~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~ 320 (355)
T d1nexb2 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320 (355)
T ss_dssp CCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCT
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEE
T ss_conf 11111111123210033320111111111111110001246882299998499989999809979999999997988884
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
-
T Consensus 321 ~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~dfs 355 (355)
T d1nexb2 321 LKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDFS 355 (355)
T ss_dssp TTTCSEEEEEEEETTEEEEEEESSSCEEEEEEECC
T ss_pred CCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECC
T ss_conf 58999899999839919999989890999999588
|
| >d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Archaeosine tRNA-guanine transglycosylase, N-terminal domain species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=26726.48 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 3-------------------------------------------------------------------------------
Q 003615 111 E------------------------------------------------------------------------------- 111 (807)
Q Consensus 111 ~------------------------------------------------------------------------------- 111 (807)
.
T Consensus 1 ~m~~F~i~~~d~~AR~G~l~~~~g~i~TP~fmpv~t~~~v~~~p~~l~~~g~~iil~NtYhl~~~p~~~~~~~~gGLh~F 80 (355)
T d1iq8a1 1 KMLKFEIKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQMVVEPKELEKMGFEIIITNSYIIYKDEELRRKALELGIHRM 80 (355)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEESEEEEBCCSSSCSSCHHHHHHTTCCEEEEEHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCEEEEEECCEEEECCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCCHHHH
T ss_conf 95689998611772248999699666089155654587401489999983899892111306789873443124770443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 81 ~~w~~~ilTDSGgfQv~sl~~~~~~~e~~i~~q~~lgsDI~m~lD~~~~~~~~~~~~~~s~~rt~~~~~~~~~~~~~~~~ 160 (355)
T d1iq8a1 81 LDYNGIIEVDSGSFQLMKYGSIEVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAVKELEITLSRAREAEEIKEIPMN 160 (355)
T ss_dssp HTCCSEEEEECSTTHHHHSSCCSSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHCCSCBB
T ss_pred HCCCCCEECCCCCCEEECCCHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02789623055663121120011244566201204576179840346787777999999999999988887653205642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 161 givqGG~~~dLR~~sa~~l~~~~~dG~aiGG~~~~~~~~~~~~~~~~i~~~~~~Lp~~kPrylmGvG~P~di~~~v~~Gi 240 (355)
T d1iq8a1 161 ATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPDRPVHLFGAGHPIVFALAVAMGV 240 (355)
T ss_dssp CCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSCTTSCEEETTCCCGGGHHHHHHTTC
T ss_pred CEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCC
T ss_conf 00012257317699986654178103201166765204789999998864101486336444137887567999998558
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003615 112 -------------------------------------------------------------------------------- 111 (807)
Q Consensus 112 -------------------------------------------------------------------------------- 111 (807)
T Consensus 241 D~FD~~~p~r~ar~g~~~t~~g~~~l~~~d~~pC~C~~C~~~srayl~HL~~~~e~~LltiHNl~~~~~l~~~iR~aI~~ 320 (355)
T d1iq8a1 241 DLFDSASYALYAKDDRYMTPEGTKRLDELDYFPCSCPVCSKYTPQELREMPKEERTRLLALHNLWVIKEEIKRVKQAIKE 320 (355)
T ss_dssp CEEEESHHHHHHHTTEEEETTEEEEGGGCSSCCCCSTTTTTCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96520588887640332157885235411013457852140589999976346488999999999999999999999985
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------9
Q 003615 112 ----------------------------------C 112 (807)
Q Consensus 112 ----------------------------------C 112 (807)
=
T Consensus 321 g~f~~~~e~~~~~~p~~~~~~~~l~~~~~~~~~~~ 355 (355)
T d1iq8a1 321 GELWRLVDERARSHPKLYSAYKRLLEHYTFLEEFE 355 (355)
T ss_dssp TCHHHHHHHHHTTCHHHHHHHHHHHHCHHHHHHHS
T ss_pred CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999869999999999998888875019
|