Citrus Sinensis ID: 003617
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | 2.2.26 [Sep-21-2011] | |||||||
| Q42560 | 898 | Aconitate hydratase 1 OS= | yes | no | 0.993 | 0.893 | 0.902 | 0.0 | |
| P49608 | 898 | Aconitate hydratase, cyto | N/A | no | 0.985 | 0.885 | 0.877 | 0.0 | |
| Q6YZX6 | 898 | Putative aconitate hydrat | yes | no | 0.996 | 0.895 | 0.858 | 0.0 | |
| Q9SIB9 | 990 | Aconitate hydratase 2, mi | no | no | 0.983 | 0.802 | 0.870 | 0.0 | |
| Q94A28 | 995 | Aconitate hydratase 3, mi | no | no | 0.996 | 0.808 | 0.788 | 0.0 | |
| Q42669 | 764 | Aconitate hydratase (Frag | N/A | no | 0.821 | 0.867 | 0.860 | 0.0 | |
| Q54X73 | 894 | Probable cytoplasmic acon | yes | no | 0.987 | 0.891 | 0.635 | 0.0 | |
| P21399 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.976 | 0.886 | 0.606 | 0.0 | |
| Q90875 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.975 | 0.885 | 0.623 | 0.0 | |
| Q01059 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.976 | 0.886 | 0.609 | 0.0 |
| >sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 1522 bits (3940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/802 (90%), Positives = 763/802 (95%)
Query: 1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
MA+ENPF+SILK L++PDGGEFG YYSLPALNDPRIDKLPYSI+ILLESAIRNCDEFQVK
Sbjct: 1 MASENPFRSILKALEKPDGGEFGNYYSLPALNDPRIDKLPYSIRILLESAIRNCDEFQVK 60
Query: 61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
SKDVEKI+DWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKINP
Sbjct: 61 SKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINP 120
Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
VHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEA MLGQPMS
Sbjct: 181 VHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMS 240
Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
MVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVEF+GEGM ELSLADRATI
Sbjct: 241 MVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATI 300
Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
ANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRANKMFVDYSEP+S+ VYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYS 360
Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
S LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGFKGFA+PKE QSK EFN
Sbjct: 361 SCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFN 420
Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
F+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+LGLEVKPWIKTSLAPGSG
Sbjct: 421 FNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKTSLAPGSG 480
Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
VVTKYL SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+AI +ND+VA+AVLSGNR
Sbjct: 481 VVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNR 540
Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GKDGK+IF RDIWPS++EV
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEV 600
Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
A VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPKSTYIHEPPYFK MTMSP
Sbjct: 601 AEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSP 660
Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct: 661 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
EIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+Y+NEG DT+ILAGAEYG
Sbjct: 721 EIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYG 780
Query: 781 SGSSRDWAAKGPMLLVNPCIMS 802
SGSSRDWAAKGPMLL ++S
Sbjct: 781 SGSSRDWAAKGPMLLGVKAVIS 802
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Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P21399|ACOC_HUMAN Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q90875|ACOC_CHICK Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q01059|ACOC_RABIT Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| 285309965 | 900 | aconitate hydratase 1 [Citrus clementina | 0.996 | 0.893 | 0.988 | 0.0 | |
| 255579588 | 900 | aconitase, putative [Ricinus communis] g | 0.985 | 0.883 | 0.932 | 0.0 | |
| 224117236 | 899 | predicted protein [Populus trichocarpa] | 0.992 | 0.890 | 0.921 | 0.0 | |
| 224133986 | 899 | predicted protein [Populus trichocarpa] | 0.983 | 0.883 | 0.928 | 0.0 | |
| 225468576 | 900 | PREDICTED: aconitate hydratase 1-like [V | 0.996 | 0.893 | 0.906 | 0.0 | |
| 296084058 | 918 | unnamed protein product [Vitis vinifera] | 0.995 | 0.874 | 0.906 | 0.0 | |
| 15233349 | 898 | aconitate hydratase 1 [Arabidopsis thali | 0.993 | 0.893 | 0.902 | 0.0 | |
| 449434116 | 900 | PREDICTED: aconitate hydratase 1-like [C | 0.996 | 0.893 | 0.894 | 0.0 | |
| 356496602 | 901 | PREDICTED: aconitate hydratase 1 [Glycin | 0.985 | 0.882 | 0.900 | 0.0 | |
| 356538327 | 901 | PREDICTED: aconitate hydratase 1-like [G | 0.985 | 0.882 | 0.904 | 0.0 |
| >gi|285309965|emb|CBE71056.1| aconitate hydratase 1 [Citrus clementina] | Back alignment and taxonomy information |
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Score = 1644 bits (4258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/805 (98%), Positives = 797/805 (99%), Gaps = 1/805 (0%)
Query: 1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRI KLPYSIKILLESAIRNCDEFQVK
Sbjct: 1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIGKLPYSIKILLESAIRNCDEFQVK 60
Query: 61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP
Sbjct: 61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
MVLPGVVGFKLSGKL+DGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI
Sbjct: 241 MVLPGVVGFKLSGKLQDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN
Sbjct: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG
Sbjct: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR
Sbjct: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP
Sbjct: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG
Sbjct: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
Query: 781 SGSSRDWAAKGPMLL-VNPCIMSDF 804
SGSSRDWAAKGPMLL V I F
Sbjct: 781 SGSSRDWAAKGPMLLGVKAVIAKSF 805
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Source: Citrus clementina Species: Citrus clementina Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579588|ref|XP_002530635.1| aconitase, putative [Ricinus communis] gi|223529808|gb|EEF31743.1| aconitase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224117236|ref|XP_002331755.1| predicted protein [Populus trichocarpa] gi|222874452|gb|EEF11583.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224133986|ref|XP_002327728.1| predicted protein [Populus trichocarpa] gi|222836813|gb|EEE75206.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225468576|ref|XP_002263337.1| PREDICTED: aconitate hydratase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296084058|emb|CBI24446.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|15233349|ref|NP_195308.1| aconitate hydratase 1 [Arabidopsis thaliana] gi|13124706|sp|Q42560.2|ACO1_ARATH RecName: Full=Aconitate hydratase 1; Short=Aconitase 1; AltName: Full=Citrate hydro-lyase 1 gi|3805849|emb|CAA21469.1| cytoplasmatic aconitate hydratase (citrate hydro-lyase)(aconitase)(EC 4.2.1.3) [Arabidopsis thaliana] gi|7270535|emb|CAB81492.1| cytoplasmatic aconitate hydratase (citrate hydro-lyase)(aconitase)(EC 4.2.1.3) [Arabidopsis thaliana] gi|17065392|gb|AAL32850.1| Unknown protein [Arabidopsis thaliana] gi|332661176|gb|AEE86576.1| aconitate hydratase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449434116|ref|XP_004134842.1| PREDICTED: aconitate hydratase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356496602|ref|XP_003517155.1| PREDICTED: aconitate hydratase 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356538327|ref|XP_003537655.1| PREDICTED: aconitate hydratase 1-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| TAIR|locus:2125354 | 898 | ACO1 "AT4G35830" [Arabidopsis | 0.996 | 0.895 | 0.881 | 0.0 | |
| TAIR|locus:2063354 | 990 | ACO3 "AT2G05710" [Arabidopsis | 0.983 | 0.802 | 0.850 | 0.0 | |
| TAIR|locus:2116297 | 995 | ACO2 "AT4G26970" [Arabidopsis | 0.996 | 0.808 | 0.767 | 0.0 | |
| DICTYBASE|DDB_G0279159 | 894 | aco1 "aconitate hydratase" [Di | 0.987 | 0.891 | 0.616 | 6.1e-268 | |
| UNIPROTKB|F1NY25 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.986 | 0.895 | 0.596 | 4.1e-262 | |
| UNIPROTKB|Q90875 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.986 | 0.895 | 0.596 | 5.3e-262 | |
| UNIPROTKB|J9P5F3 | 901 | ACO1 "Uncharacterized protein" | 0.986 | 0.883 | 0.588 | 7.7e-261 | |
| ZFIN|ZDB-GENE-031118-76 | 896 | aco1 "aconitase 1, soluble" [D | 0.983 | 0.886 | 0.593 | 3.3e-260 | |
| UNIPROTKB|I3LJW4 | 898 | ACO1 "Uncharacterized protein" | 0.986 | 0.886 | 0.590 | 4.3e-260 | |
| UNIPROTKB|E2RMX9 | 901 | ACO1 "Uncharacterized protein" | 0.986 | 0.883 | 0.587 | 7e-260 |
| TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3740 (1321.6 bits), Expect = 0., P = 0.
Identities = 710/805 (88%), Positives = 747/805 (92%)
Query: 1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
MA+ENPF+SILK L++PDGGEFG YYSLPALNDPRIDKLPYSI+ILLESAIRNCDEFQVK
Sbjct: 1 MASENPFRSILKALEKPDGGEFGNYYSLPALNDPRIDKLPYSIRILLESAIRNCDEFQVK 60
Query: 61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
SKDVEKI+DWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKINP
Sbjct: 61 SKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINP 120
Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMS 240
VHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMID MLGQPMS
Sbjct: 181 VHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMS 240
Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
MVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVEF+GEGM ELSLADRATI
Sbjct: 241 MVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATI 300
Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
ANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRANKMFVDYSEP+S+ VYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYS 360
Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
S LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGFKGFA+PKE QSK EFN
Sbjct: 361 SCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFN 420
Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
F+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+LGLEVKPWIKTSLAPGSG
Sbjct: 421 FNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKTSLAPGSG 480
Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
VVTKYL SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+AI +ND+VA+AVLSGNR
Sbjct: 481 VVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNR 540
Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GKDGK+IF RDIWPS++EV
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEV 600
Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
A VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPKSTYIHEPPYFK MTMSP
Sbjct: 601 AEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSP 660
Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct: 661 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
EIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+Y+NEG DT+ILAGAEYG
Sbjct: 721 EIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYG 780
Query: 781 SGSSRDWAAKGPMLL-VNPCIMSDF 804
SGSSRDWAAKGPMLL V I F
Sbjct: 781 SGSSRDWAAKGPMLLGVKAVISKSF 805
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| TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279159 aco1 "aconitate hydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P5F3 ACO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-031118-76 aco1 "aconitase 1, soluble" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LJW4 ACO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RMX9 ACO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6YZX6 | ACOC_ORYSJ | 4, ., 2, ., 1, ., 3 | 0.8583 | 0.9962 | 0.8953 | yes | no |
| Q6G9K9 | ACON_STAAS | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
| P63433 | ACON_STAAM | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
| P09339 | ACON_BACSU | 4, ., 2, ., 1, ., 3 | 0.5620 | 0.9504 | 0.8437 | yes | no |
| Q1RKD5 | ACON_RICBR | 4, ., 2, ., 1, ., 3 | 0.5575 | 0.9355 | 0.8531 | yes | no |
| Q94A28 | ACO3M_ARATH | 4, ., 2, ., 1, ., 3 | 0.7888 | 0.9962 | 0.8080 | no | no |
| Q0VCU1 | ACOC_BOVIN | 4, ., 2, ., 1, ., 3 | 0.6106 | 0.9764 | 0.8863 | yes | no |
| Q68VV0 | ACON_RICTY | 4, ., 2, ., 1, ., 3 | 0.5507 | 0.9256 | 0.8507 | yes | no |
| Q92G90 | ACON_RICCN | 4, ., 2, ., 1, ., 3 | 0.5653 | 0.9306 | 0.8553 | yes | no |
| Q9SIB9 | ACO2M_ARATH | 4, ., 2, ., 1, ., 3 | 0.8702 | 0.9838 | 0.8020 | no | no |
| Q9RTN7 | ACON_DEIRA | 4, ., 2, ., 1, ., 3 | 0.5583 | 0.9752 | 0.8686 | yes | no |
| P99148 | ACON_STAAN | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
| Q54X73 | ACOC_DICDI | 4, ., 2, ., 1, ., 3 | 0.6355 | 0.9876 | 0.8914 | yes | no |
| O04916 | ACOC_SOLTU | 4, ., 2, ., 1, ., 3 | 0.8355 | 0.6468 | 0.8474 | N/A | no |
| Q8NQ98 | ACON_CORGL | 4, ., 2, ., 1, ., 3 | 0.5079 | 0.9491 | 0.8157 | yes | no |
| P28271 | ACOC_MOUSE | 4, ., 2, ., 1, ., 3 | 0.6123 | 0.9776 | 0.8875 | yes | no |
| Q9I3F5 | ACON1_PSEAE | 4, ., 2, ., 1, ., 3 | 0.5589 | 0.9814 | 0.8703 | yes | no |
| Q6GH55 | ACON_STAAR | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
| Q2A1K3 | ACON_FRATH | 4, ., 2, ., 1, ., 3 | 0.5439 | 0.9690 | 0.8345 | yes | no |
| Q42669 | ACOC_CUCMC | 4, ., 2, ., 1, ., 3 | 0.8601 | 0.8215 | 0.8678 | N/A | no |
| Q5HPJ0 | ACON_STAEQ | 4, ., 2, ., 1, ., 3 | 0.5497 | 0.9578 | 0.8579 | yes | no |
| Q01059 | ACOC_RABIT | 4, ., 2, ., 1, ., 3 | 0.6093 | 0.9764 | 0.8863 | yes | no |
| Q4UK20 | ACON_RICFE | 4, ., 2, ., 1, ., 3 | 0.5610 | 0.9268 | 0.8519 | yes | no |
| P63434 | ACON_STAAW | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
| Q9ZCF4 | ACON_RICPR | 4, ., 2, ., 1, ., 3 | 0.5504 | 0.9120 | 0.8382 | yes | no |
| Q42560 | ACO1_ARATH | 4, ., 2, ., 1, ., 3 | 0.9027 | 0.9938 | 0.8930 | yes | no |
| P21399 | ACOC_HUMAN | 4, ., 2, ., 1, ., 3 | 0.6068 | 0.9764 | 0.8863 | yes | no |
| Q8CPC2 | ACON_STAES | 4, ., 2, ., 1, ., 3 | 0.5497 | 0.9578 | 0.8579 | yes | no |
| Q8FTA8 | ACON_COREF | 4, ., 2, ., 1, ., 3 | 0.5060 | 0.9591 | 0.8260 | yes | no |
| Q63270 | ACOC_RAT | 4, ., 2, ., 1, ., 3 | 0.6111 | 0.9776 | 0.8875 | yes | no |
| P49608 | ACOC_CUCMA | 4, ., 2, ., 1, ., 3 | 0.8779 | 0.9851 | 0.8853 | N/A | no |
| A0QX20 | ACON_MYCS2 | 4, ., 2, ., 1, ., 3 | 0.5082 | 0.9913 | 0.8483 | yes | no |
| Q90875 | ACOC_CHICK | 4, ., 2, ., 1, ., 3 | 0.6237 | 0.9752 | 0.8852 | yes | no |
| P70920 | ACON_BRAJA | 4, ., 2, ., 1, ., 3 | 0.5443 | 0.9541 | 0.8498 | yes | no |
| Q59938 | ACON_STRMU | 4, ., 2, ., 1, ., 3 | 0.5284 | 0.9467 | 0.8603 | yes | no |
| Q23500 | ACOC_CAEEL | 4, ., 2, ., 1, ., 3 | 0.6096 | 0.9714 | 0.8838 | yes | no |
| P25516 | ACON1_ECOLI | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9405 | 0.8518 | N/A | no |
| Q6NH63 | ACON_CORDI | 4, ., 2, ., 1, ., 3 | 0.5127 | 0.9591 | 0.8286 | yes | no |
| P37032 | ACON_LEGPH | 4, ., 2, ., 1, ., 3 | 0.5717 | 0.9566 | 0.8664 | yes | no |
| Q4JVM4 | ACON_CORJK | 4, ., 2, ., 1, ., 3 | 0.5127 | 0.9603 | 0.8279 | yes | no |
| Q5HG69 | ACON_STAAC | 4, ., 2, ., 1, ., 3 | 0.5471 | 0.9578 | 0.8579 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.2.1 | 0.998 |
| 3rd Layer | 4.2.1.3 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 807 | |||
| PLN00070 | 936 | PLN00070, PLN00070, aconitate hydratase | 0.0 | |
| PTZ00092 | 898 | PTZ00092, PTZ00092, aconitate hydratase-like prote | 0.0 | |
| PRK09277 | 888 | PRK09277, PRK09277, aconitate hydratase; Validated | 0.0 | |
| TIGR01341 | 876 | TIGR01341, aconitase_1, aconitate hydratase 1 | 0.0 | |
| PRK12881 | 889 | PRK12881, acnA, aconitate hydratase; Provisional | 0.0 | |
| COG1048 | 861 | COG1048, AcnA, Aconitase A [Energy production and | 0.0 | |
| cd01586 | 404 | cd01586, AcnA_IRP, Aconitase A catalytic domain | 0.0 | |
| TIGR02333 | 858 | TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh | 0.0 | |
| pfam00330 | 464 | pfam00330, Aconitase, Aconitase family (aconitate | 1e-161 | |
| cd01351 | 389 | cd01351, Aconitase, Aconitase catalytic domain; Ac | 4e-92 | |
| cd01580 | 171 | cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai | 4e-75 | |
| TIGR01340 | 745 | TIGR01340, aconitase_mito, aconitate hydratase, mi | 2e-58 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 4e-58 | |
| cd01584 | 412 | cd01584, AcnA_Mitochondrial, Aconitase catalyzes t | 6e-56 | |
| cd01585 | 380 | cd01585, AcnA_Bact, Aconitase catalyzes the revers | 5e-51 | |
| TIGR01342 | 658 | TIGR01342, acon_putative, aconitate hydratase, put | 1e-48 | |
| cd01583 | 382 | cd01583, IPMI, 3-isopropylmalate dehydratase catal | 1e-46 | |
| COG0065 | 423 | COG0065, LeuC, 3-isopropylmalate dehydratase large | 4e-41 | |
| pfam00694 | 131 | pfam00694, Aconitase_C, Aconitase C-terminal domai | 2e-37 | |
| PRK00402 | 418 | PRK00402, PRK00402, 3-isopropylmalate dehydratase | 1e-31 | |
| TIGR02086 | 412 | TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas | 5e-31 | |
| TIGR02083 | 419 | TIGR02083, LEU2, 3-isopropylmalate dehydratase, la | 6e-31 | |
| TIGR00170 | 465 | TIGR00170, leuC, 3-isopropylmalate dehydratase, la | 3e-29 | |
| PRK12466 | 471 | PRK12466, PRK12466, isopropylmalate isomerase larg | 9e-29 | |
| TIGR01343 | 412 | TIGR01343, hacA_fam, homoaconitate hydratase famil | 2e-27 | |
| cd01582 | 363 | cd01582, Homoaconitase, Homoaconitase and other un | 2e-26 | |
| TIGR00139 | 712 | TIGR00139, h_aconitase, homoaconitase | 5e-25 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 6e-16 | |
| PRK11413 | 751 | PRK11413, PRK11413, putative hydratase; Provisiona | 1e-09 | |
| cd01581 | 436 | cd01581, AcnB, Aconitate hydratase B catalyses the | 1e-08 | |
| TIGR00117 | 844 | TIGR00117, acnB, aconitate hydratase 2 | 1e-07 | |
| COG1049 | 852 | COG1049, AcnB, Aconitase B [Energy production and | 4e-07 | |
| PRK09238 | 835 | PRK09238, PRK09238, bifunctional aconitate hydrata | 6e-06 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 1e-05 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 5e-05 | |
| PLN00094 | 938 | PLN00094, PLN00094, aconitate hydratase 2; Provisi | 7e-05 | |
| cd01579 | 121 | cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik | 0.001 | |
| cd01578 | 149 | cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi | 0.002 |
| >gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase | Back alignment and domain information |
|---|
Score = 1791 bits (4641), Expect = 0.0
Identities = 722/795 (90%), Positives = 762/795 (95%)
Query: 1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
MA+ENPFK IL +L +P GGEFGKYYSLPALNDPRIDKLPYSI+ILLESAIRNCD FQV
Sbjct: 39 MASENPFKGILTSLPKPGGGEFGKYYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVT 98
Query: 61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
+DVEKIIDWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGD NKINP
Sbjct: 99 KEDVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDPNKINP 158
Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGS AF NMLVVPPGSGI
Sbjct: 159 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGI 218
Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
VHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 219 VHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 278
Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVG FVEFYGEGMSELSLADRATI
Sbjct: 279 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATI 338
Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
ANMSPEYGATMGFFPVDHVTLQYLKLTGRSD+TV+MIE+YLRANKMFVDY+EPQ ERVYS
Sbjct: 339 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKMFVDYNEPQQERVYS 398
Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
SYLEL+LE+V PC+SGPKRPHDRVPL EMKADWH+CLDN+VGFKGFA+PKE QSKVA+F+
Sbjct: 399 SYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKEAQSKVAKFS 458
Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
FHG PA+LRHG VVIAAITSCTNTSNPSVMLGA LVAKKACELGLEVKPWIKTSLAPGSG
Sbjct: 459 FHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSG 518
Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
VVTKYL SGLQKYLN GFHIVGYGCTTCIGNSG++D++VA+AITENDIVAAAVLSGNR
Sbjct: 519 VVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVASAITENDIVAAAVLSGNR 578
Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE EP+G GKDGK +F RDIWPS+EEV
Sbjct: 579 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKDVFFRDIWPSNEEV 638
Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
A VVQ SVLPDMFK+TYEAITKGNPMWNQLSVPSGTLY+WDPKSTYIHEPPYFK+MTMSP
Sbjct: 639 AEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPKSTYIHEPPYFKNMTMSP 698
Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDR+DFNSYGSRRGND
Sbjct: 699 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGND 758
Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
EIMARGTFANIR+VNKLL GEVGPKT+HIPTGEKLSVFDAAM+YK+EGHDT+ILAGAEYG
Sbjct: 759 EIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKLSVFDAAMKYKSEGHDTIILAGAEYG 818
Query: 781 SGSSRDWAAKGPMLL 795
SGSSRDWAAKGPMLL
Sbjct: 819 SGSSRDWAAKGPMLL 833
|
Length = 936 |
| >gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) | Back alignment and domain information |
|---|
| >gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 | Back alignment and domain information |
|---|
| >gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| KOG0452 | 892 | consensus RNA-binding translational regulator IRP | 100.0 | |
| PLN00070 | 936 | aconitate hydratase | 100.0 | |
| PTZ00092 | 898 | aconitate hydratase-like protein; Provisional | 100.0 | |
| TIGR01341 | 876 | aconitase_1 aconitate hydratase 1. This model repr | 100.0 | |
| PRK12881 | 889 | acnA aconitate hydratase; Provisional | 100.0 | |
| PRK09277 | 888 | aconitate hydratase; Validated | 100.0 | |
| TIGR02333 | 858 | 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe | 100.0 | |
| COG1048 | 861 | AcnA Aconitase A [Energy production and conversion | 100.0 | |
| TIGR01340 | 745 | aconitase_mito aconitate hydratase, mitochondrial. | 100.0 | |
| PRK07229 | 646 | aconitate hydratase; Validated | 100.0 | |
| TIGR01342 | 658 | acon_putative aconitate hydratase, putative, Aquif | 100.0 | |
| KOG0453 | 778 | consensus Aconitase/homoaconitase (aconitase super | 100.0 | |
| TIGR00139 | 712 | h_aconitase homoaconitase. Homoaconitase, aconitas | 100.0 | |
| PRK11413 | 751 | putative hydratase; Provisional | 100.0 | |
| cd01586 | 404 | AcnA_IRP Aconitase A catalytic domain. Aconitase A | 100.0 | |
| TIGR00170 | 465 | leuC 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| PRK12466 | 471 | isopropylmalate isomerase large subunit; Provision | 100.0 | |
| PRK05478 | 466 | isopropylmalate isomerase large subunit; Validated | 100.0 | |
| PF00330 | 465 | Aconitase: Aconitase family (aconitate hydratase); | 100.0 | |
| cd01584 | 412 | AcnA_Mitochondrial Aconitase catalyzes the reversi | 100.0 | |
| cd01583 | 382 | IPMI 3-isopropylmalate dehydratase catalyzes the i | 100.0 | |
| TIGR01343 | 412 | hacA_fam homoaconitate hydratase family protein. T | 100.0 | |
| PRK00402 | 418 | 3-isopropylmalate dehydratase large subunit; Revie | 100.0 | |
| TIGR02086 | 412 | IPMI_arch 3-isopropylmalate dehydratase, large sub | 100.0 | |
| cd01585 | 380 | AcnA_Bact Aconitase catalyzes the reversible isome | 100.0 | |
| TIGR02083 | 419 | LEU2 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| COG0065 | 423 | LeuC 3-isopropylmalate dehydratase large subunit [ | 100.0 | |
| cd01581 | 436 | AcnB Aconitate hydratase B catalyses the formation | 100.0 | |
| cd01582 | 363 | Homoaconitase Homoaconitase and other uncharacteri | 100.0 | |
| cd01351 | 389 | Aconitase Aconitase catalytic domain; Aconitase ca | 100.0 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 100.0 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 100.0 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 100.0 | |
| cd01580 | 171 | AcnA_IRP_Swivel Aconitase A swivel domain. This is | 100.0 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 100.0 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 100.0 | |
| cd01578 | 149 | AcnA_Mitochon_Swivel Mitochondrial aconitase A swi | 99.96 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 99.91 | |
| PF00694 | 131 | Aconitase_C: Aconitase C-terminal domain CAUTION: | 99.91 | |
| cd01579 | 121 | AcnA_Bact_Swivel Bacterial Aconitase-like swivel d | 99.85 | |
| TIGR02084 | 156 | leud 3-isopropylmalate dehydratase, small subunit. | 99.84 | |
| PRK14023 | 166 | homoaconitate hydratase small subunit; Provisional | 99.84 | |
| PRK00439 | 163 | leuD 3-isopropylmalate dehydratase small subunit; | 99.84 | |
| COG0066 | 191 | LeuD 3-isopropylmalate dehydratase small subunit [ | 99.84 | |
| TIGR02087 | 154 | LEUD_arch 3-isopropylmalate dehydratase, small sub | 99.83 | |
| PRK01641 | 200 | leuD isopropylmalate isomerase small subunit; Prov | 99.81 | |
| TIGR00171 | 188 | leuD 3-isopropylmalate dehydratase, small subunit. | 99.8 | |
| PLN00072 | 246 | 3-isopropylmalate isomerase/dehydratase small subu | 99.79 | |
| cd01674 | 129 | Homoaconitase_Swivel Homoaconitase swivel domain. | 99.75 | |
| cd00404 | 88 | Aconitase_swivel Aconitase swivel domain. Aconitas | 99.72 | |
| cd01577 | 91 | IPMI_Swivel Aconatase-like swivel domain of 3-isop | 99.72 | |
| cd01576 | 131 | AcnB_Swivel Aconitase B swivel domain. Aconitate h | 99.59 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 99.5 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 99.24 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 98.38 | |
| PF04412 | 400 | DUF521: Protein of unknown function (DUF521); Inte | 95.98 | |
| COG1679 | 403 | Predicted aconitase [General function prediction o | 93.88 | |
| PF06434 | 204 | Aconitase_2_N: Aconitate hydratase 2 N-terminus; I | 90.62 | |
| cd01355 | 389 | AcnX Putative Aconitase X catalytic domain. Putati | 89.65 |
| >KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-260 Score=2096.88 Aligned_cols=799 Identities=72% Similarity=1.190 Sum_probs=785.9
Q ss_pred CCCccccccceecCCCCceeEEEeCCCCCCCCCCCCChhhhHHHhhhccccCcccccHHHHHHHHhhhcCCCCceeEeee
Q 003617 4 ENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFK 83 (807)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~y~~l~~l~~~~~~~LP~sirvLlEn~lR~~d~~~~~~~~ie~il~~~~~~~~~~ei~~~ 83 (807)
.+||+...++|+..+. .++||+|++|+ ..+++||||||||||+++||||++.|.++++|+||+|...+.+..||+|+
T Consensus 6 ~~~f~~~~~~l~~~~~--~~kyf~l~~l~-~ryd~LP~SIrvLLEsAvRnCD~f~v~k~DVe~IldW~~t~~k~vEvpFk 82 (892)
T KOG0452|consen 6 ENPFAQLIETLPKPGG--VYKYFDLPKLN-SRYDKLPYSIRVLLESAVRNCDNFHVKKKDVENILDWKNTQKKQVEVPFK 82 (892)
T ss_pred cccHHHHHhccCCCCC--cceeeeccccc-cccccCchhHHHHHHHHHhcCccceeeHHHHHHHhCccccCccceeeccc
Confidence 4789877788888764 79999999998 68999999999999999999999999999999999999887777899999
Q ss_pred cceeEeecCccHhHHHHHHHHHHHHHHcCCCCCccCCCCCEEEEecCCCCcCcccchHHHHhhhHHHHHHhhhhhhhhhh
Q 003617 84 PARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 163 (807)
Q Consensus 84 pdrvl~qD~Tg~~ai~dlaamr~~~~~~G~dp~~i~p~~pv~lviDH~v~~~~~~~~~a~~~n~~~e~~rn~ery~flk~ 163 (807)
|+||++|||||+||++|||+|||+++++|+||+||||.+|+|||||||+|+|+.++++|+++|+..||+||+|||.||||
T Consensus 83 PARViLQDFTGvPavVD~AaMRdAv~~lGgdp~KinP~cP~DLviDHSvQvDf~r~~~alqkN~~lEF~RNkERf~FlKW 162 (892)
T KOG0452|consen 83 PARVILQDFTGVPAVVDFAAMRDAVKNLGGDPEKINPLCPVDLVIDHSVQVDFARSADALQKNQELEFERNKERFTFLKW 162 (892)
T ss_pred cceeeeecccCCchheeHHHHHHHHHHcCCCHHHcCCCCCcceEeeeeeEEeeccCHHHHhhcceeeeecchhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeCCCCceeecccccccceeeecCCCccccCeEEecCCCCcccCcccceeeccCHHHHHHHHcCCceEeec
Q 003617 164 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL 243 (807)
Q Consensus 164 ~~~~f~~~~~~ppG~GI~HqV~lE~la~~v~~~~G~~~PdtvvGtDSHT~~~GalG~lg~GVGg~ea~aam~g~~~~~~v 243 (807)
+.++|+|+.++|||+||+||||||||||||+..++++|||++|||||||||++|||++||||||+|+|++|+|||++|.+
T Consensus 163 gs~af~NmlivPPGsGivHQvNLEYLaRvVF~~~~~lyPDSvVGTDSHtTMidGlGvlGWGVGGIEaEAvMLGqpiSmvl 242 (892)
T KOG0452|consen 163 GSRAFDNMLIVPPGSGIVHQVNLEYLARVVFESKDLLYPDSVVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVL 242 (892)
T ss_pred hhHhhcceEEeCCCCceeEEeehhhhhheeeccCceecccccccccCcceeecccceeeccccceehhhhhhcCchheec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEEeecCCCCChhcHHHHHHHHHHhcCcccEEEEEecCccccCChhhhhhhhccCcccCceeeeecCChHHHHH
Q 003617 244 PGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQY 323 (807)
Q Consensus 244 PevvgV~L~G~L~~gVtakDliL~i~~~L~~~G~~gk~VEf~G~gv~~LS~~dRaTI~NMa~E~GAt~g~fp~De~T~~Y 323 (807)
|+|||.+|+|+|+++||++||+|+|+++||+.|++||||||||+|+++||+.||+||+||+||||||.||||+|+.|++|
T Consensus 243 P~ViG~~L~Gkl~~~vTstDlVLtiTk~LRq~GVvGKFVEF~G~Gva~LSiaDRaTIaNMcPEYGAt~gfFPvD~vtl~y 322 (892)
T KOG0452|consen 243 PEVIGYKLTGKLSPLVTSTDLVLTITKHLRQLGVVGKFVEFFGPGVAELSIADRATIANMCPEYGATMGFFPVDEVTLQY 322 (892)
T ss_pred ccceeEEeccccCCCceeehhhhhHHHHHHHhccceeeEEEecCccceechhhhhhhhhcCccccceeeeeccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcchHHHHHHHHHHhhccccCCCCCCCCcccEEEEEEcCCceeeccCCCCCCCcccCCccccchHHhhcccccC
Q 003617 324 LKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 403 (807)
Q Consensus 324 L~~tgr~~~~~~~~~~y~~~~~l~~~~~~~D~~a~Y~~vieiDLs~veP~vAgP~~P~~~~~vse~~~~~~~~~~~~~~~ 403 (807)
|+.|||+++.++.+|.|+|+.++|++...++.++.|++++++||++|+|+|+||+||+++++|++++.+|++||.+++++
T Consensus 323 l~~Tgrs~~~~~~i~~yLka~~~f~~~~~~~q~p~yt~~l~l~L~~vvp~vSGPKRPhDrV~v~dmk~Df~scL~~~vgF 402 (892)
T KOG0452|consen 323 LKQTGRSEEKLDIIEKYLKAVKMFRDYNDPSQDPVYTQVLELDLGTVVPSVSGPKRPHDRVAVSDMKADFHSCLDSKVGF 402 (892)
T ss_pred HHHcCCcHHHHHHHHHHHHHHhhhhhccCcccCcceeeEEEEecCceeeccCCCCCCccccchhhHHHHHHHhhcCcccc
Confidence 99999999999999999999999999877888899999999999999999999999999999999999999999999999
Q ss_pred CCcCCccccccccceeecCCCccccCCCCEEEEEeccCCCCCChhHHHHHHHHHHHHHhcCCccCCceeEEEecCcHHHH
Q 003617 404 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVT 483 (807)
Q Consensus 404 ~g~~~~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLak~A~~~G~kv~p~Vk~~v~PgS~~V~ 483 (807)
||+.++++.+++...+.++|++++|.||+|+||+|+||||+|||++|.+|+||||||+++|++|+||+||+++|||.+|+
T Consensus 403 KgFai~~e~q~~~v~f~~~g~~~~l~HGsVVIAAitSCTNtsNPSVMlgAgLlAKkAv~~GL~v~PyikTSLsPGSgvVt 482 (892)
T KOG0452|consen 403 KGFAIAPEAQSKSVEFQYDGTTAKLKHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLNVKPYIKTSLSPGSGVVT 482 (892)
T ss_pred cccccChhHhhceEEEEECCeeeEeccCcEEEEEEecccCCCCcHHhhhhhHHHHHHHhcCceecceeecccCCCCchhh
Confidence 99999988888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHhcCcEEeccCcccccCCCCCCChHHHhhhccCCeEEEEeeccCCCCCCCCCCCCCceEecCHHHHHH
Q 003617 484 KYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA 563 (807)
Q Consensus 484 ~~l~~~Gl~~~l~~aGf~v~~~GCg~CiG~~g~l~~~~~~~i~~~~~~~~~VsS~NRNF~GR~g~~~~~~yLaSP~lVaA 563 (807)
.||.++|++++|+++||.|+||||++||||+|+|.+++..+|++|++|+++|+|||||||||+||.+++||||||+||+|
T Consensus 483 ~YL~~SGv~pyL~klGF~IvGYGC~TCiGNsgpl~e~V~~ai~~ndlV~~gvLSGNrNFEGRvhp~tRANYLASPpLvva 562 (892)
T KOG0452|consen 483 KYLSESGVLPYLEKLGFDIVGYGCMTCIGNSGPLDEAVVNAIEQNDLVAAGVLSGNRNFEGRVHPNTRANYLASPPLVVA 562 (892)
T ss_pred hhhhhccchhHHHhcCceeeccccceeccCCCCCCHHHHHhhhcCCeEEEEEeecCCCccccccccchhhhccCchHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCccccCCCCCCcccCCCCceeecccCCCChhhHHHhhhcccCcchhhhccccccCCCcccccccCCCCCccccCCC
Q 003617 564 YALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 643 (807)
Q Consensus 564 ~AlaG~I~~d~~~dplg~~~~G~~v~l~diwP~~~ei~~~~~~~v~~~~~~~~y~~i~~~~~~w~~l~~~~~~~~~wd~~ 643 (807)
|||+|+++||+++||||+++||+.|||+||||+++||++++++.|.|+||++.|+.|..|++.||+|++|++.+|+||++
T Consensus 563 YaiaGtV~IDfe~eplg~~~~Gk~vfl~DIWPtr~Ev~~ve~~~Vip~mFk~~y~~I~~gn~~Wn~L~~p~~~Ly~Wd~~ 642 (892)
T KOG0452|consen 563 YAIAGTVNIDFETEPLGVDPDGKNVFLRDIWPTREEVAEVEEEHVIPSMFKEVYEKIELGNPDWNQLEVPSSKLYPWDPK 642 (892)
T ss_pred hhhcceeecceeccccccCCCCCeEEEeecCCCHHHHHHHHHhcccHHHHHHHHHHHhhcChhhhhccCCccceeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCCCCCCCCCCCCCCCCccCcEEEEecCCCcccCccccCCCCCCCCHHHHHHHhcCCCccccccccCcCCchhhh
Q 003617 644 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIM 723 (807)
Q Consensus 644 styi~~pp~f~~~~~~~~~~~~i~~~~vl~~~gd~itTDhIsPag~i~~~s~a~~~L~~~G~~~~~~nsygsrrgn~evm 723 (807)
||||++||||++|+.+++++++|++|+||+.+||+||||||||||+|.++|||+|||.+||++|+|||||||||||+|||
T Consensus 643 STYI~~ppfF~~mT~~~p~~~~i~~A~~LLnlGDSvTTDHISPAGsI~r~SpAAr~L~~Rg~tprdFNsYGsRRGND~vM 722 (892)
T KOG0452|consen 643 STYIKEPPFFEGMTRDLPGPQSIEDAYCLLNLGDSVTTDHISPAGSIARTSPAARYLTERGLTPRDFNSYGSRRGNDAVM 722 (892)
T ss_pred CceecCCccccccccCCCCcccccceeEEEeccCcccccccCCCccccccCHHHHHHHhcCCChhhccccccccCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccchhhhccCCCCCCceEecCCCcccchhhHHHhhhhCCCceEEEecCcccCCCCchhhhhcccccCCcEEEec
Q 003617 724 ARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLVNPCIMSD 803 (807)
Q Consensus 724 ~rg~f~n~r~~n~~~~~~~g~~~~~~~~g~~~~i~~~a~~y~~~~~~~iivag~nyG~GSSRe~Aa~~~~~lGv~aVIA~ 803 (807)
.||||+|||+.|+++. +.||.|+|.|+||.++|||||++|+++|+|+||+||++||+|||||||||||.||||||||||
T Consensus 723 aRGTFANIrlvNkl~~-k~gP~TvHiPsge~ldvFdAA~~Y~~~g~p~iilaGkeYGsGsSRDWAAKGP~LlGvKAViae 801 (892)
T KOG0452|consen 723 ARGTFANIRLVNKLLS-KVGPKTVHIPSGEELDVFDAAERYKSEGIPLIILAGKEYGSGSSRDWAAKGPFLLGVKAVIAE 801 (892)
T ss_pred hcccchhhHHHHHHhc-ccCCceEecCCCCeecHhhHHHHHHhcCCceEEEeccccCCCCccchhhcCchhhhhHHHHHH
Confidence 9999999999999994 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 003617 804 FCS 806 (807)
Q Consensus 804 Sfa 806 (807)
||-
T Consensus 802 S~E 804 (892)
T KOG0452|consen 802 SYE 804 (892)
T ss_pred HHH
Confidence 985
|
|
| >PLN00070 aconitate hydratase | Back alignment and domain information |
|---|
| >PTZ00092 aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01341 aconitase_1 aconitate hydratase 1 | Back alignment and domain information |
|---|
| >PRK12881 acnA aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >PRK09277 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >COG1048 AcnA Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01340 aconitase_mito aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >PRK07229 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00139 h_aconitase homoaconitase | Back alignment and domain information |
|---|
| >PRK11413 putative hydratase; Provisional | Back alignment and domain information |
|---|
| >cd01586 AcnA_IRP Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PRK12466 isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05478 isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >TIGR01343 hacA_fam homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >cd01580 AcnA_IRP_Swivel Aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain | Back alignment and domain information |
|---|
| >cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >TIGR02084 leud 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK14023 homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK01641 leuD isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >cd01674 Homoaconitase_Swivel Homoaconitase swivel domain | Back alignment and domain information |
|---|
| >cd00404 Aconitase_swivel Aconitase swivel domain | Back alignment and domain information |
|---|
| >cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >cd01576 AcnB_Swivel Aconitase B swivel domain | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins | Back alignment and domain information |
|---|
| >COG1679 Predicted aconitase [General function prediction only] | Back alignment and domain information |
|---|
| >PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >cd01355 AcnX Putative Aconitase X catalytic domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 807 | ||||
| 3snp_A | 908 | Crystal Structure Analysis Of Iron Regulatory Prote | 0.0 | ||
| 2b3x_A | 888 | Structure Of An Orthorhombic Crystal Form Of Human | 0.0 | ||
| 1ami_A | 754 | Steric And Conformational Features Of The Aconitase | 4e-42 | ||
| 1aco_A | 754 | Crystal Structure Of Aconitase With Transaconitate | 5e-42 | ||
| 1nis_A | 754 | Crystal Structure Of Aconitase With Trans-Aconitate | 8e-42 | ||
| 1c96_A | 753 | S642a:citrate Complex Of Aconitase Length = 753 | 1e-41 | ||
| 5acn_A | 754 | Structure Of Activated Aconitase. Formation Of The | 3e-41 | ||
| 1b0j_A | 754 | Crystal Structure Of Aconitase With Isocitrate Leng | 5e-41 | ||
| 1c97_A | 753 | S642a:isocitrate Complex Of Aconitase Length = 753 | 6e-41 | ||
| 1b0m_A | 753 | Aconitase R644q:fluorocitrate Complex Length = 753 | 1e-40 |
| >pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 | Back alignment and structure |
|
| >pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 | Back alignment and structure |
| >pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 | Back alignment and structure |
| >pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 | Back alignment and structure |
| >pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 | Back alignment and structure |
| >pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 | Back alignment and structure |
| >pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 | Back alignment and structure |
| >pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 | Back alignment and structure |
|---|
Score = 1558 bits (4037), Expect = 0.0
Identities = 480/791 (60%), Positives = 607/791 (76%), Gaps = 3/791 (0%)
Query: 5 NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDV 64
NPF + + L G+ K+++L L D R +LP+SI++LLE+AIRNCDEF VK +D+
Sbjct: 2 NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59
Query: 65 EKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPV 124
E I+ W T K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLGGD KINP+ P
Sbjct: 60 ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119
Query: 125 DLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQV 184
DLVIDHS+QVD R +++Q N + EF RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179
Query: 185 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 244
NLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239
Query: 245 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMS 304
V+G++L GK VT+TD+VLT+T+ LR+ GVVG FVEF+G G+++LS+ADRATIANM
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299
Query: 305 PEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLE 364
PEYGAT FFPVD V++ YL TGR ++ + I+ YL+A MF D+++P + ++ +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359
Query: 365 LNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGT 424
L+L+ VVPC SGPKRP D+V +++MK D+ +CL + GFKGF + E+ + F + T
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419
Query: 425 PAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTK 484
L HG VVIAAITSCTNTSNPSVMLGA L+AKKA + GL V P+IKTSL+PGSGVVT
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479
Query: 485 YLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEG 544
YLQ SG+ YL+ LGF +VGYGC TCIGNSG + + V AIT+ D+VA VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539
Query: 545 RVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVV 604
RVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV G+++FL+DIWP+ +E+ V
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599
Query: 605 QKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPH 664
++ V+P MFK Y+ I N WN L+ PS L+ W+ KSTYI PP+F+++T+ P
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQPPK 659
Query: 665 GVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMA 724
+ AY LLN GDS+TTDHISPAG+I ++SPAA+YL RG+ R+FNSYGSRRGND +MA
Sbjct: 660 SIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMA 719
Query: 725 RGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSS 784
RGTFANIRL+N+ LN + P+TIH+P+GE L VFDAA RY+ G ++LAG EYG+GSS
Sbjct: 720 RGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSS 778
Query: 785 RDWAAKGPMLL 795
RDWAAKGP LL
Sbjct: 779 RDWAAKGPFLL 789
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 807 | ||||
| d2b3ya2 | 629 | c.83.1.1 (A:2-630) Iron-responsive element binding | 0.0 | |
| d1acoa2 | 527 | c.83.1.1 (A:2-528) Aconitase A, N-terminal domain | 1e-114 | |
| d1l5ja3 | 490 | c.83.1.1 (A:373-862) Aconitase B, C-terminal domai | 3e-68 | |
| d2b3ya1 | 259 | c.8.2.1 (A:631-889) ron-responsive element binding | 6e-60 | |
| d1acoa1 | 226 | c.8.2.1 (A:529-754) Aconitase A, C-terminal domain | 2e-29 | |
| d1v7la_ | 162 | c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc | 9e-06 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 740 bits (1911), Expect = 0.0
Identities = 381/630 (60%), Positives = 482/630 (76%), Gaps = 2/630 (0%)
Query: 5 NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDV 64
NPF + + L G+ K+++L L D R +LP+SI++LLE+AIRNCDEF VK +D+
Sbjct: 2 NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59
Query: 65 EKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPV 124
E I+ W T K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLGGD KINP+ P
Sbjct: 60 ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119
Query: 125 DLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQV 184
DLVIDHS+QVD R +++Q N + EF RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179
Query: 185 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 244
NLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239
Query: 245 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMS 304
V+G++L GK VT+TD+VLT+T+ LR+ GVVG FVEF+G G+++LS+ADRATIANM
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299
Query: 305 PEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLE 364
PEYGAT FFPVD V++ YL TGR ++ + I+ YL+A MF D+++P + ++ +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359
Query: 365 LNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGT 424
L+L+ VVPC SGPKRP D+V +++MK D+ +CL + GFKGF + E+ + F + T
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419
Query: 425 PAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTK 484
L HG VVIAAITSCTNTSNPSVMLGA L+AKKA + GL V P+IKTSL+PGSGVVT
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479
Query: 485 YLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEG 544
YLQ SG+ YL+ LGF +VGYGC TCIGNSG + + V AIT+ D+VA VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539
Query: 545 RVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVV 604
RVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV G+++FL+DIWP+ +E+ V
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599
Query: 605 QKSVLPDMFKATYEAITKGNPMWNQLSVPS 634
++ V+P MFK Y+ I N WN L+ PS
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPS 629
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| d2b3ya2 | 629 | Iron-responsive element binding protein 1, N-termi | 100.0 | |
| d1acoa2 | 527 | Aconitase A, N-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1l5ja3 | 490 | Aconitase B, C-terminal domain {Escherichia coli [ | 100.0 | |
| d2b3ya1 | 259 | ron-responsive element binding protein 1, C-termin | 100.0 | |
| d1acoa1 | 226 | Aconitase A, C-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1v7la_ | 162 | Isopropylmalate isomerase LeuD {Pyrococcus horikos | 99.91 | |
| d1l5ja2 | 212 | Aconitase B, second N-terminal domain {Escherichia | 82.27 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=1575.11 Aligned_cols=629 Identities=60% Similarity=1.058 Sum_probs=604.9
Q ss_pred CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 99710012410069997225997078999999899981346777320024585566399999998211499994069630
Q 003617 4 ENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFK 83 (807)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~LP~sirvLlEn~lR~~d~~~v~~~~iekIl~~~~~~~~~~ei~~~ 83 (807)
.|||....++|+..++ .++||+|+++++.++++|||||||||||+|||||+..+++++|++|++|......+.||+|+
T Consensus 1 ~~~f~~~~~~~~~~~~--~~~~~~l~~l~~~~~~~lP~s~rillEn~lr~~~~~~v~~~~i~~~~~~~~~~~~~~ei~f~ 78 (629)
T d2b3ya2 1 SNPFAHLAEPLDPVQP--GKKFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDIENILHWNVTQHKNIEVPFK 78 (629)
T ss_dssp CCTTGGGEEESCTTST--TCEEECGGGGCCTTGGGSCHHHHHHHHHHHHTCCSSSSCHHHHHHHHTHHHHTTTTCEEEEC
T ss_pred CCCHHHHHHHCCCCCC--CCEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCC
T ss_conf 9845777631045788--75373378955157665884299999898870688757999999997233568988744603
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24457415862769999999999999919998743788887999369987584341679985039999994331114422
Q 003617 84 PARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 163 (807)
Q Consensus 84 pdrvl~qD~TG~~ai~dlaamrd~~~~~G~dp~~inp~~pv~lviDHsv~~~~~~~~~a~~~n~~~e~~rn~ery~flkw 163 (807)
||||+||||||+|+++|||+|||+++++|+||.+|||.+||+|+||||||++++++++++++|+++||+||.|||+||||
T Consensus 79 p~rv~lqD~tg~~a~~dlaamrda~~~~g~dp~~i~p~~p~~lviDHsv~~~~~~~~~~~~~n~~~e~~rn~er~~fl~w 158 (629)
T d2b3ya2 79 PARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158 (629)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 24034232557539999998799999707990103789863299778767615888026663301344302788888999
Q ss_pred CCCCCCCCEEECCCCCEEECCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEC
Q ss_conf 01224662020899943300002211105541798334683773289875568644034126789999999289168445
Q 003617 164 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL 243 (807)
Q Consensus 164 ~~~~f~~~~v~ppG~GI~HQv~lE~la~vv~~~~G~~~PdtivGtDSHT~~~galG~la~GVGg~ea~aamlg~~~~l~v 243 (807)
++++|+||+|+|||+|||||||+||||+||+.++|+++||+||||||||||+||||+|||||||+|++++|+|||+||++
T Consensus 159 ~~~~~~~~~~~pPg~GI~HQvnlE~la~~v~~~~~~~~pdtlVGtDSHT~~~GalG~lg~GVGg~Eae~amlg~~~~~~v 238 (629)
T d2b3ya2 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVL 238 (629)
T ss_dssp HHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEC
T ss_conf 99886346221355425667788875046537788587314996478865000320054686669999998379079953
Q ss_pred CCEEEEEEEEECCCCCCHHCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHH
Q ss_conf 81899999702699999330899999999964821179999648666678100132302472238404111287679999
Q 003617 244 PGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQY 323 (807)
Q Consensus 244 PevVgV~L~G~L~~gVtakDivL~i~~~Lr~~G~vgk~VEF~G~Gv~~Lsv~dRaTIaNMa~E~GAt~~~Fp~De~T~~Y 323 (807)
||||||+|+|+|++|||||||||+|+++||++|++||||||+|||+++||+++|||||||++||||||||||+|++|++|
T Consensus 239 Pevvgv~L~G~L~~gVtakDliL~i~~~L~~~G~vgk~VEF~G~gi~~LS~~dRaTI~NMa~E~GAt~gifp~De~T~~Y 318 (629)
T d2b3ya2 239 PQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITY 318 (629)
T ss_dssp CCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHH
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
T ss_conf 73689999940599966507898887885407755189874066111068878656642002137569997504614664
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf 96609993058999999998000024899999982027999986883010038999997323775511068752043467
Q 003617 324 LKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 403 (807)
Q Consensus 324 L~~tgr~~~~~~~v~~y~~~~~l~~~~~~~D~~a~Y~~vieiDLs~ieP~VAgP~~P~~~~~lse~~~~~~~~~~~~~~~ 403 (807)
|+.|||+++.++++++|+++|++|++...+|++|+|+++++||||+|||+||+|++|||+++|++++.+|.+++..+.++
T Consensus 319 L~~tgR~~~~~~~ve~y~~a~~l~~~~~~~d~da~Y~~vieiDLs~veP~VAgP~~P~d~v~l~e~~~~~~~~l~~~~~~ 398 (629)
T d2b3ya2 319 LVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398 (629)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHTCCCCTTCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 44201341111145677778776411022466667642999866680242578997666158876676866643355432
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHH
Q ss_conf 77678500113330110289754347877899972057899995699999999999985699448852199953849999
Q 003617 404 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVT 483 (807)
Q Consensus 404 ~g~~i~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLa~~A~~~G~kv~p~Vk~~vaPgS~~V~ 483 (807)
+++....+.........+.+.++.+.||+|+||||||||||||||+|+||+|||+||+++|++++||||++|+|||++|+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~V~ia~IgSCTN~s~~dl~~AA~lLa~kaV~~Gl~v~p~Vk~~v~PGS~~V~ 478 (629)
T d2b3ya2 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVT 478 (629)
T ss_dssp TBCCCCGGGTTCEEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
T ss_conf 01211333333333332036322345774779999667788817899999998402553398405536688853603323
Q ss_pred HHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCHHHHHH
Q ss_conf 99998691899984593993467533448989997578864204971898861157777899799888617349899999
Q 003617 484 KYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA 563 (807)
Q Consensus 484 ~~l~~~Gll~~L~~aG~~v~~~GCg~CiG~~g~l~~~~~~~i~~~~~~~~~V~S~NRNF~GR~g~~~~~~YLaSP~lVaA 563 (807)
+||+++||+++|+++||++++|||++||||+|+++++++++|.+|++++++|||+||||+|||||..+++|||||+||||
T Consensus 479 ~~le~~Gl~~~L~~aGf~i~~~GC~~CiGnsGpl~~~~~~~i~~gdl~~~~V~S~NRNFeGR~g~~~~~~yLaSP~lVaA 558 (629)
T d2b3ya2 479 YYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIA 558 (629)
T ss_dssp HHHHHTSCHHHHHHTTCCBCCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHH
T ss_pred HHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHH
T ss_conf 78776771553331005892464300378878877404331046871576651628898867899989869899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 98708544578778753489995122135899906678764204683013200122357996665546799
Q 003617 564 YALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPS 634 (807)
Q Consensus 564 ~AlaG~I~~d~~~~plg~~~~g~~v~l~diwP~~~Ei~~~~~~~v~~~~f~~~y~~~~~~~~~w~~l~~~~ 634 (807)
|||+|+|+||+++||||++++|++|||+||||+.+||++++.+.++|++|++.|++++.|+++|++|++|.
T Consensus 559 ~AiaG~I~id~~~eplg~~~~G~~V~L~diwPs~~Ei~~~~~~~v~~~~f~~~y~~v~~g~~~W~~l~~p~ 629 (629)
T d2b3ya2 559 YAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629 (629)
T ss_dssp HHHHCBSCCCTTTSCSEEETTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCC
T ss_pred HHHCEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 98215455687768776699989773678797879999999854696666899887625781011588999
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| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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