Citrus Sinensis ID: 003763
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 797 | 2.2.26 [Sep-21-2011] | |||||||
| Q42560 | 898 | Aconitate hydratase 1 OS= | no | no | 0.994 | 0.883 | 0.902 | 0.0 | |
| P49608 | 898 | Aconitate hydratase, cyto | N/A | no | 0.994 | 0.883 | 0.878 | 0.0 | |
| Q6YZX6 | 898 | Putative aconitate hydrat | yes | no | 0.993 | 0.881 | 0.869 | 0.0 | |
| Q9SIB9 | 990 | Aconitate hydratase 2, mi | no | no | 0.993 | 0.8 | 0.871 | 0.0 | |
| Q42669 | 764 | Aconitate hydratase (Frag | N/A | no | 0.952 | 0.993 | 0.865 | 0.0 | |
| Q94A28 | 995 | Aconitate hydratase 3, mi | no | no | 0.993 | 0.795 | 0.808 | 0.0 | |
| O04916 | 616 | Aconitate hydratase, cyto | N/A | no | 0.769 | 0.995 | 0.846 | 0.0 | |
| Q54X73 | 894 | Probable cytoplasmic acon | yes | no | 0.993 | 0.885 | 0.633 | 0.0 | |
| P21399 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.988 | 0.886 | 0.612 | 0.0 | |
| Q90875 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.988 | 0.886 | 0.626 | 0.0 |
| >sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 1501 bits (3886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/793 (90%), Positives = 755/793 (95%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDAMN LGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKW
Sbjct: 104 MRDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 163
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GSNAFHNMLVVPPGSGIVHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 164 GSNAFHNMLVVPPGSGIVHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGW 223
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
GVGGIEAEA MLGQPMSMVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVE
Sbjct: 224 GVGGIEAEATMLGQPMSMVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVE 283
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
F+GEGM ELSLADRATIANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRA
Sbjct: 284 FHGEGMRELSLADRATIANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRA 343
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
NKMFVDYSEP+S+ VYSS LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGF
Sbjct: 344 NKMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGF 403
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGFA+PKE QSK EFNF+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+L
Sbjct: 404 KGFAVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDL 463
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+
Sbjct: 464 GLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVAS 523
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AI +ND+VA+AVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GK
Sbjct: 524 AIVDNDLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGK 583
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 540
DGK+IF RDIWPS++EVA VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPK
Sbjct: 584 DGKQIFFRDIWPSNKEVAEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPK 643
Query: 541 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 600
STYIHEPPYFK MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER
Sbjct: 644 STYIHEPPYFKGMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 703
Query: 601 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 660
GVDRRDFNSYGSRRGNDEIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+
Sbjct: 704 GVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMK 763
Query: 661 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCF
Sbjct: 764 YRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCF 823
Query: 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 780
K GEDAET GLTG E YTI+LP++VSEI+PGQDV VVT++GKSFTC +RFDTEVELAYFD
Sbjct: 824 KAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFD 883
Query: 781 HGGILQYVIRNLI 793
HGGILQYVIRNLI
Sbjct: 884 HGGILQYVIRNLI 896
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Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 | Back alignment and function description |
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| >sp|O04916|ACOC_SOLTU Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P21399|ACOC_HUMAN Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q90875|ACOC_CHICK Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 797 | ||||||
| 285309965 | 900 | aconitate hydratase 1 [Citrus clementina | 1.0 | 0.885 | 0.998 | 0.0 | |
| 255579588 | 900 | aconitase, putative [Ricinus communis] g | 1.0 | 0.885 | 0.928 | 0.0 | |
| 224117236 | 899 | predicted protein [Populus trichocarpa] | 1.0 | 0.886 | 0.915 | 0.0 | |
| 224133986 | 899 | predicted protein [Populus trichocarpa] | 0.996 | 0.883 | 0.926 | 0.0 | |
| 296084058 | 918 | unnamed protein product [Vitis vinifera] | 0.998 | 0.867 | 0.915 | 0.0 | |
| 225468576 | 900 | PREDICTED: aconitate hydratase 1-like [V | 0.998 | 0.884 | 0.915 | 0.0 | |
| 449434116 | 900 | PREDICTED: aconitate hydratase 1-like [C | 1.0 | 0.885 | 0.897 | 0.0 | |
| 356538327 | 901 | PREDICTED: aconitate hydratase 1-like [G | 1.0 | 0.884 | 0.899 | 0.0 | |
| 356496602 | 901 | PREDICTED: aconitate hydratase 1 [Glycin | 1.0 | 0.884 | 0.898 | 0.0 | |
| 357483921 | 901 | Aconitate hydratase [Medicago truncatula | 1.0 | 0.884 | 0.895 | 0.0 |
| >gi|285309965|emb|CBE71056.1| aconitate hydratase 1 [Citrus clementina] | Back alignment and taxonomy information |
|---|
Score = 1650 bits (4272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/797 (99%), Positives = 797/797 (100%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW
Sbjct: 104 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 163
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 164 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 223
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKL+DGVTATDLVLTVTQMLRKHGVVGMFVE
Sbjct: 224 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLQDGVTATDLVLTVTQMLRKHGVVGMFVE 283
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA
Sbjct: 284 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 343
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF
Sbjct: 344 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 403
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL
Sbjct: 404 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 463
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA
Sbjct: 464 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 523
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK
Sbjct: 524 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 583
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 540
DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK
Sbjct: 584 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 643
Query: 541 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 600
STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER
Sbjct: 644 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 703
Query: 601 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 660
GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR
Sbjct: 704 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 763
Query: 661 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 764 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 823
Query: 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 780
KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD
Sbjct: 824 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 883
Query: 781 HGGILQYVIRNLINVRQ 797
HGGILQYVIRNLINVRQ
Sbjct: 884 HGGILQYVIRNLINVRQ 900
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Source: Citrus clementina Species: Citrus clementina Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579588|ref|XP_002530635.1| aconitase, putative [Ricinus communis] gi|223529808|gb|EEF31743.1| aconitase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224117236|ref|XP_002331755.1| predicted protein [Populus trichocarpa] gi|222874452|gb|EEF11583.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224133986|ref|XP_002327728.1| predicted protein [Populus trichocarpa] gi|222836813|gb|EEE75206.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296084058|emb|CBI24446.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225468576|ref|XP_002263337.1| PREDICTED: aconitate hydratase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449434116|ref|XP_004134842.1| PREDICTED: aconitate hydratase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356538327|ref|XP_003537655.1| PREDICTED: aconitate hydratase 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356496602|ref|XP_003517155.1| PREDICTED: aconitate hydratase 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357483921|ref|XP_003612247.1| Aconitate hydratase [Medicago truncatula] gi|355513582|gb|AES95205.1| Aconitate hydratase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 797 | ||||||
| TAIR|locus:2125354 | 898 | ACO1 "AT4G35830" [Arabidopsis | 0.994 | 0.883 | 0.882 | 0.0 | |
| TAIR|locus:2063354 | 990 | ACO3 "AT2G05710" [Arabidopsis | 0.993 | 0.8 | 0.851 | 0.0 | |
| TAIR|locus:2116297 | 995 | ACO2 "AT4G26970" [Arabidopsis | 0.993 | 0.795 | 0.786 | 0.0 | |
| DICTYBASE|DDB_G0279159 | 894 | aco1 "aconitate hydratase" [Di | 0.993 | 0.885 | 0.614 | 1e-265 | |
| UNIPROTKB|F1NY25 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.988 | 0.886 | 0.607 | 2.7e-265 | |
| UNIPROTKB|Q90875 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.988 | 0.886 | 0.607 | 2.7e-265 | |
| UNIPROTKB|I3LJW4 | 898 | ACO1 "Uncharacterized protein" | 0.988 | 0.877 | 0.606 | 3.1e-264 | |
| UNIPROTKB|Q01059 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.988 | 0.886 | 0.602 | 1.4e-263 | |
| MGI|MGI:87879 | 889 | Aco1 "aconitase 1" [Mus muscul | 0.988 | 0.886 | 0.602 | 1.2e-262 | |
| UNIPROTKB|E2RMX9 | 901 | ACO1 "Uncharacterized protein" | 0.988 | 0.874 | 0.601 | 2.5e-262 |
| TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3689 (1303.7 bits), Expect = 0., P = 0.
Identities = 700/793 (88%), Positives = 739/793 (93%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDAMN LGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKW
Sbjct: 104 MRDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 163
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXX 120
GSNAFHNMLVVPPGSGIVHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMID
Sbjct: 164 GSNAFHNMLVVPPGSGIVHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGW 223
Query: 121 XXXXXXXXXXMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
MLGQPMSMVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVE
Sbjct: 224 GVGGIEAEATMLGQPMSMVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVE 283
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
F+GEGM ELSLADRATIANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRA
Sbjct: 284 FHGEGMRELSLADRATIANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRA 343
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
NKMFVDYSEP+S+ VYSS LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGF
Sbjct: 344 NKMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGF 403
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGFA+PKE QSK EFNF+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+L
Sbjct: 404 KGFAVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDL 463
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+
Sbjct: 464 GLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVAS 523
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AI +ND+VA+AVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GK
Sbjct: 524 AIVDNDLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGK 583
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 540
DGK+IF RDIWPS++EVA VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPK
Sbjct: 584 DGKQIFFRDIWPSNKEVAEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPK 643
Query: 541 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 600
STYIHEPPYFK MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER
Sbjct: 644 STYIHEPPYFKGMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 703
Query: 601 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 660
GVDRRDFNSYGSRRGNDEIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+
Sbjct: 704 GVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMK 763
Query: 661 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCF
Sbjct: 764 YRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCF 823
Query: 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 780
K GEDAET GLTG E YTI+LP++VSEI+PGQDV VVT++GKSFTC +RFDTEVELAYFD
Sbjct: 824 KAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFD 883
Query: 781 HGGILQYVIRNLI 793
HGGILQYVIRNLI
Sbjct: 884 HGGILQYVIRNLI 896
|
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| TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0279159 aco1 "aconitate hydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LJW4 ACO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q01059 ACO1 "Cytoplasmic aconitate hydratase" [Oryctolagus cuniculus (taxid:9986)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:87879 Aco1 "aconitase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RMX9 ACO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6YZX6 | ACOC_ORYSJ | 4, ., 2, ., 1, ., 3 | 0.8699 | 0.9937 | 0.8819 | yes | no |
| Q6G9K9 | ACON_STAAS | 4, ., 2, ., 1, ., 3 | 0.5475 | 0.9861 | 0.8723 | yes | no |
| P63433 | ACON_STAAM | 4, ., 2, ., 1, ., 3 | 0.5475 | 0.9861 | 0.8723 | yes | no |
| P09339 | ACON_BACSU | 4, ., 2, ., 1, ., 3 | 0.5569 | 0.9849 | 0.8635 | yes | no |
| Q1RKD5 | ACON_RICBR | 4, ., 2, ., 1, ., 3 | 0.5513 | 0.9786 | 0.8813 | yes | no |
| Q8FTA8 | ACON_COREF | 4, ., 2, ., 1, ., 3 | 0.5077 | 0.9887 | 0.8409 | yes | no |
| Q0VCU1 | ACOC_BOVIN | 4, ., 2, ., 1, ., 3 | 0.6161 | 0.9887 | 0.8863 | yes | no |
| Q68VV0 | ACON_RICTY | 4, ., 2, ., 1, ., 3 | 0.5477 | 0.9698 | 0.8804 | yes | no |
| Q92G90 | ACON_RICCN | 4, ., 2, ., 1, ., 3 | 0.5552 | 0.9698 | 0.8804 | yes | no |
| Q9RTN7 | ACON_DEIRA | 4, ., 2, ., 1, ., 3 | 0.5552 | 0.9912 | 0.8719 | yes | no |
| P99148 | ACON_STAAN | 4, ., 2, ., 1, ., 3 | 0.5475 | 0.9861 | 0.8723 | yes | no |
| Q54X73 | ACOC_DICDI | 4, ., 2, ., 1, ., 3 | 0.6331 | 0.9937 | 0.8859 | yes | no |
| O04916 | ACOC_SOLTU | 4, ., 2, ., 1, ., 3 | 0.8466 | 0.7691 | 0.9951 | N/A | no |
| Q8NQ98 | ACON_CORGL | 4, ., 2, ., 1, ., 3 | 0.5035 | 0.9899 | 0.8402 | yes | no |
| P28271 | ACOC_MOUSE | 4, ., 2, ., 1, ., 3 | 0.6212 | 0.9887 | 0.8863 | yes | no |
| P49608 | ACOC_CUCMA | 4, ., 2, ., 1, ., 3 | 0.8789 | 0.9949 | 0.8830 | N/A | no |
| Q6GH55 | ACON_STAAR | 4, ., 2, ., 1, ., 3 | 0.5487 | 0.9861 | 0.8723 | yes | no |
| Q2A1K3 | ACON_FRATH | 4, ., 2, ., 1, ., 3 | 0.5386 | 0.9836 | 0.8367 | yes | no |
| Q42669 | ACOC_CUCMC | 4, ., 2, ., 1, ., 3 | 0.8657 | 0.9523 | 0.9934 | N/A | no |
| Q5HPJ0 | ACON_STAEQ | 4, ., 2, ., 1, ., 3 | 0.5525 | 0.9861 | 0.8723 | yes | no |
| Q01059 | ACOC_RABIT | 4, ., 2, ., 1, ., 3 | 0.6212 | 0.9887 | 0.8863 | yes | no |
| Q4UK20 | ACON_RICFE | 4, ., 2, ., 1, ., 3 | 0.5552 | 0.9698 | 0.8804 | yes | no |
| P63434 | ACON_STAAW | 4, ., 2, ., 1, ., 3 | 0.5475 | 0.9861 | 0.8723 | yes | no |
| Q9ZCF4 | ACON_RICPR | 4, ., 2, ., 1, ., 3 | 0.5431 | 0.9661 | 0.8769 | yes | no |
| Q42560 | ACO1_ARATH | 4, ., 2, ., 1, ., 3 | 0.9029 | 0.9949 | 0.8830 | no | no |
| P21399 | ACOC_HUMAN | 4, ., 2, ., 1, ., 3 | 0.6123 | 0.9887 | 0.8863 | yes | no |
| Q8CPC2 | ACON_STAES | 4, ., 2, ., 1, ., 3 | 0.5525 | 0.9861 | 0.8723 | yes | no |
| Q63270 | ACOC_RAT | 4, ., 2, ., 1, ., 3 | 0.6161 | 0.9887 | 0.8863 | yes | no |
| Q9I3F5 | ACON1_PSEAE | 4, ., 2, ., 1, ., 3 | 0.5645 | 0.9774 | 0.8560 | yes | no |
| A0QX20 | ACON_MYCS2 | 4, ., 2, ., 1, ., 3 | 0.5196 | 0.9861 | 0.8335 | yes | no |
| Q90875 | ACOC_CHICK | 4, ., 2, ., 1, ., 3 | 0.6262 | 0.9887 | 0.8863 | yes | no |
| P70920 | ACON_BRAJA | 4, ., 2, ., 1, ., 3 | 0.5387 | 0.9786 | 0.8609 | yes | no |
| Q59938 | ACON_STRMU | 4, ., 2, ., 1, ., 3 | 0.5251 | 0.9874 | 0.8862 | yes | no |
| Q23500 | ACOC_CAEEL | 4, ., 2, ., 1, ., 3 | 0.6062 | 0.9899 | 0.8895 | yes | no |
| P25516 | ACON1_ECOLI | 4, ., 2, ., 1, ., 3 | 0.5561 | 0.9799 | 0.8765 | N/A | no |
| Q6NH63 | ACON_CORDI | 4, ., 2, ., 1, ., 3 | 0.5184 | 0.9874 | 0.8426 | yes | no |
| P37032 | ACON_LEGPH | 4, ., 2, ., 1, ., 3 | 0.5705 | 0.9736 | 0.8709 | yes | no |
| Q4JVM4 | ACON_CORJK | 4, ., 2, ., 1, ., 3 | 0.5124 | 0.9887 | 0.8418 | yes | no |
| Q5HG69 | ACON_STAAC | 4, ., 2, ., 1, ., 3 | 0.5475 | 0.9861 | 0.8723 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.2.1 | 0.983 |
| 3rd Layer | 4.2.1.3 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | eugene3.01810009 | aconitate hydratase 1 (EC-4.2.1.3) (899 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | estExt_Genewise1_v1.C_LG_XVI2794 | • | • | • | 0.941 | ||||||
 | estExt_Genewise1_v1.C_LG_XIV2957 | • | • | • | 0.941 | ||||||
 | estExt_fgenesh4_pm.C_1480010 | • | • | • | 0.916 | ||||||
 | estExt_fgenesh4_pg.C_LG_XVI0781 | • | • | • | 0.908 | ||||||
 | eugene3.00280188 | • | • | • | 0.908 | ||||||
 | estExt_fgenesh4_pg.C_660173 | • | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pm.C_LG_IX0030 | • | • | • | 0.902 | ||||||
 | eugene3.00050378 | • | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pg.C_LG_VII0812 | • | • | • | 0.902 | ||||||
 | eugene3.00070229 | • | 0.900 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 797 | |||
| PLN00070 | 936 | PLN00070, PLN00070, aconitate hydratase | 0.0 | |
| PTZ00092 | 898 | PTZ00092, PTZ00092, aconitate hydratase-like prote | 0.0 | |
| PRK09277 | 888 | PRK09277, PRK09277, aconitate hydratase; Validated | 0.0 | |
| TIGR01341 | 876 | TIGR01341, aconitase_1, aconitate hydratase 1 | 0.0 | |
| PRK12881 | 889 | PRK12881, acnA, aconitate hydratase; Provisional | 0.0 | |
| COG1048 | 861 | COG1048, AcnA, Aconitase A [Energy production and | 0.0 | |
| cd01586 | 404 | cd01586, AcnA_IRP, Aconitase A catalytic domain | 0.0 | |
| TIGR02333 | 858 | TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh | 0.0 | |
| pfam00330 | 464 | pfam00330, Aconitase, Aconitase family (aconitate | 1e-147 | |
| cd01580 | 171 | cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai | 1e-111 | |
| cd01351 | 389 | cd01351, Aconitase, Aconitase catalytic domain; Ac | 2e-87 | |
| TIGR01340 | 745 | TIGR01340, aconitase_mito, aconitate hydratase, mi | 4e-69 | |
| TIGR01342 | 658 | TIGR01342, acon_putative, aconitate hydratase, put | 7e-67 | |
| pfam00694 | 131 | pfam00694, Aconitase_C, Aconitase C-terminal domai | 2e-57 | |
| cd01584 | 412 | cd01584, AcnA_Mitochondrial, Aconitase catalyzes t | 2e-55 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 5e-54 | |
| cd01585 | 380 | cd01585, AcnA_Bact, Aconitase catalyzes the revers | 1e-50 | |
| cd01583 | 382 | cd01583, IPMI, 3-isopropylmalate dehydratase catal | 3e-45 | |
| COG0065 | 423 | COG0065, LeuC, 3-isopropylmalate dehydratase large | 2e-40 | |
| TIGR02083 | 419 | TIGR02083, LEU2, 3-isopropylmalate dehydratase, la | 6e-31 | |
| PRK00402 | 418 | PRK00402, PRK00402, 3-isopropylmalate dehydratase | 1e-30 | |
| TIGR02086 | 412 | TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas | 3e-30 | |
| TIGR00170 | 465 | TIGR00170, leuC, 3-isopropylmalate dehydratase, la | 5e-29 | |
| PRK12466 | 471 | PRK12466, PRK12466, isopropylmalate isomerase larg | 3e-28 | |
| TIGR01343 | 412 | TIGR01343, hacA_fam, homoaconitate hydratase famil | 8e-27 | |
| cd01582 | 363 | cd01582, Homoaconitase, Homoaconitase and other un | 2e-26 | |
| TIGR00139 | 712 | TIGR00139, h_aconitase, homoaconitase | 4e-25 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 8e-24 | |
| cd01579 | 121 | cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik | 4e-21 | |
| cd00404 | 88 | cd00404, Aconitase_swivel, Aconitase swivel domain | 2e-19 | |
| cd01578 | 149 | cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi | 4e-16 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 9e-16 | |
| cd01577 | 91 | cd01577, IPMI_Swivel, Aconatase-like swivel domain | 5e-12 | |
| COG0066 | 191 | COG0066, LeuD, 3-isopropylmalate dehydratase small | 4e-10 | |
| PRK11413 | 751 | PRK11413, PRK11413, putative hydratase; Provisiona | 1e-09 | |
| TIGR02087 | 154 | TIGR02087, LEUD_arch, 3-isopropylmalate dehydratas | 2e-09 | |
| PRK14023 | 166 | PRK14023, PRK14023, homoaconitate hydratase small | 6e-09 | |
| cd01581 | 436 | cd01581, AcnB, Aconitate hydratase B catalyses the | 9e-09 | |
| TIGR00117 | 844 | TIGR00117, acnB, aconitate hydratase 2 | 7e-08 | |
| COG1049 | 852 | COG1049, AcnB, Aconitase B [Energy production and | 3e-07 | |
| PRK00439 | 163 | PRK00439, leuD, 3-isopropylmalate dehydratase smal | 3e-07 | |
| PRK09238 | 835 | PRK09238, PRK09238, bifunctional aconitate hydrata | 5e-06 | |
| PRK01641 | 200 | PRK01641, leuD, isopropylmalate isomerase small su | 2e-05 | |
| PLN00094 | 938 | PLN00094, PLN00094, aconitate hydratase 2; Provisi | 5e-05 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 6e-05 | |
| TIGR02084 | 156 | TIGR02084, leud, 3-isopropylmalate dehydratase, sm | 3e-04 | |
| PLN00072 | 246 | PLN00072, PLN00072, 3-isopropylmalate isomerase/de | 0.002 |
| >gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase | Back alignment and domain information |
|---|
Score = 1793 bits (4645), Expect = 0.0
Identities = 721/794 (90%), Positives = 762/794 (95%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDAMN LGGD NKINPLVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKW
Sbjct: 142 MRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 201
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS AF NMLVVPPGSGIVHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 202 GSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGW 261
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVG FVE
Sbjct: 262 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVE 321
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSD+TV+MIE+YLRA
Sbjct: 322 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRA 381
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
NKMFVDY+EPQ ERVYSSYLEL+LE+V PC+SGPKRPHDRVPL EMKADWH+CLDN+VGF
Sbjct: 382 NKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 441
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGFA+PKE QSKVA+F+FHG PA+LRHG VVIAAITSCTNTSNPSVMLGA LVAKKACEL
Sbjct: 442 KGFAVPKEAQSKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 501
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN GFHIVGYGCTTCIGNSG++D++VA+
Sbjct: 502 GLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVAS 561
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE EP+G GK
Sbjct: 562 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGK 621
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 540
DGK +F RDIWPS+EEVA VVQ SVLPDMFK+TYEAITKGNPMWNQLSVPSGTLY+WDPK
Sbjct: 622 DGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPK 681
Query: 541 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 600
STYIHEPPYFK+MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER
Sbjct: 682 STYIHEPPYFKNMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 741
Query: 601 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 660
GVDR+DFNSYGSRRGNDEIMARGTFANIR+VNKLL GEVGPKT+HIPTGEKLSVFDAAM+
Sbjct: 742 GVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKLSVFDAAMK 801
Query: 661 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YK+EGHDT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 802 YKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 861
Query: 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 780
K GEDA+T GLTGHERYTIDLPS++SEI+PGQDV V TD+GKSFTC +RFDTEVELAYFD
Sbjct: 862 KSGEDADTLGLTGHERYTIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYFD 921
Query: 781 HGGILQYVIRNLIN 794
HGGIL YVIRNLI
Sbjct: 922 HGGILPYVIRNLIK 935
|
Length = 936 |
| >gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) | Back alignment and domain information |
|---|
| >gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238809 cd01577, IPMI_Swivel, Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >gnl|CDD|223144 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233716 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|184460 PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 | Back alignment and domain information |
|---|
| >gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|234762 PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|179314 PRK01641, leuD, isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|131139 TIGR02084, leud, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|177701 PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 797 | |||
| PLN00070 | 936 | aconitate hydratase | 100.0 | |
| PTZ00092 | 898 | aconitate hydratase-like protein; Provisional | 100.0 | |
| KOG0452 | 892 | consensus RNA-binding translational regulator IRP | 100.0 | |
| TIGR01341 | 876 | aconitase_1 aconitate hydratase 1. This model repr | 100.0 | |
| PRK12881 | 889 | acnA aconitate hydratase; Provisional | 100.0 | |
| PRK09277 | 888 | aconitate hydratase; Validated | 100.0 | |
| TIGR02333 | 858 | 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe | 100.0 | |
| COG1048 | 861 | AcnA Aconitase A [Energy production and conversion | 100.0 | |
| TIGR01340 | 745 | aconitase_mito aconitate hydratase, mitochondrial. | 100.0 | |
| PRK07229 | 646 | aconitate hydratase; Validated | 100.0 | |
| TIGR01342 | 658 | acon_putative aconitate hydratase, putative, Aquif | 100.0 | |
| TIGR00139 | 712 | h_aconitase homoaconitase. Homoaconitase, aconitas | 100.0 | |
| PRK11413 | 751 | putative hydratase; Provisional | 100.0 | |
| KOG0453 | 778 | consensus Aconitase/homoaconitase (aconitase super | 100.0 | |
| cd01586 | 404 | AcnA_IRP Aconitase A catalytic domain. Aconitase A | 100.0 | |
| TIGR00170 | 465 | leuC 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| PRK12466 | 471 | isopropylmalate isomerase large subunit; Provision | 100.0 | |
| PRK05478 | 466 | isopropylmalate isomerase large subunit; Validated | 100.0 | |
| cd01584 | 412 | AcnA_Mitochondrial Aconitase catalyzes the reversi | 100.0 | |
| cd01583 | 382 | IPMI 3-isopropylmalate dehydratase catalyzes the i | 100.0 | |
| PF00330 | 465 | Aconitase: Aconitase family (aconitate hydratase); | 100.0 | |
| cd01585 | 380 | AcnA_Bact Aconitase catalyzes the reversible isome | 100.0 | |
| TIGR01343 | 412 | hacA_fam homoaconitate hydratase family protein. T | 100.0 | |
| COG0065 | 423 | LeuC 3-isopropylmalate dehydratase large subunit [ | 100.0 | |
| TIGR02086 | 412 | IPMI_arch 3-isopropylmalate dehydratase, large sub | 100.0 | |
| PRK00402 | 418 | 3-isopropylmalate dehydratase large subunit; Revie | 100.0 | |
| TIGR02083 | 419 | LEU2 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| cd01582 | 363 | Homoaconitase Homoaconitase and other uncharacteri | 100.0 | |
| cd01581 | 436 | AcnB Aconitate hydratase B catalyses the formation | 100.0 | |
| cd01351 | 389 | Aconitase Aconitase catalytic domain; Aconitase ca | 100.0 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 100.0 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 100.0 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 100.0 | |
| cd01580 | 171 | AcnA_IRP_Swivel Aconitase A swivel domain. This is | 100.0 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 100.0 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 100.0 | |
| cd01578 | 149 | AcnA_Mitochon_Swivel Mitochondrial aconitase A swi | 100.0 | |
| COG0066 | 191 | LeuD 3-isopropylmalate dehydratase small subunit [ | 100.0 | |
| PRK00439 | 163 | leuD 3-isopropylmalate dehydratase small subunit; | 100.0 | |
| PRK14023 | 166 | homoaconitate hydratase small subunit; Provisional | 100.0 | |
| TIGR02087 | 154 | LEUD_arch 3-isopropylmalate dehydratase, small sub | 100.0 | |
| TIGR02084 | 156 | leud 3-isopropylmalate dehydratase, small subunit. | 100.0 | |
| PLN00072 | 246 | 3-isopropylmalate isomerase/dehydratase small subu | 100.0 | |
| TIGR00171 | 188 | leuD 3-isopropylmalate dehydratase, small subunit. | 100.0 | |
| PRK01641 | 200 | leuD isopropylmalate isomerase small subunit; Prov | 100.0 | |
| cd01579 | 121 | AcnA_Bact_Swivel Bacterial Aconitase-like swivel d | 100.0 | |
| PF00694 | 131 | Aconitase_C: Aconitase C-terminal domain CAUTION: | 99.98 | |
| cd01577 | 91 | IPMI_Swivel Aconatase-like swivel domain of 3-isop | 99.96 | |
| cd00404 | 88 | Aconitase_swivel Aconitase swivel domain. Aconitas | 99.96 | |
| cd01674 | 129 | Homoaconitase_Swivel Homoaconitase swivel domain. | 99.95 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 99.94 | |
| cd01576 | 131 | AcnB_Swivel Aconitase B swivel domain. Aconitate h | 99.91 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 99.91 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 99.9 | |
| PRK14812 | 119 | hypothetical protein; Provisional | 99.82 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 99.81 | |
| PF06434 | 204 | Aconitase_2_N: Aconitate hydratase 2 N-terminus; I | 98.46 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 96.06 | |
| PF04412 | 400 | DUF521: Protein of unknown function (DUF521); Inte | 95.95 | |
| COG1679 | 403 | Predicted aconitase [General function prediction o | 94.15 | |
| cd01355 | 389 | AcnX Putative Aconitase X catalytic domain. Putati | 91.81 |
| >PLN00070 aconitate hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-234 Score=2020.96 Aligned_cols=794 Identities=91% Similarity=1.431 Sum_probs=765.2
Q ss_pred ChHHHHhhCCCCCccCCCCceEEEecCcccCCCCCchhHHHHhhHHHHHHhhhhhhHHhhhccccCcceeeCCCCceecc
Q 003763 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 80 (797)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~l~iDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~~~~~~~~~pg~GI~Hq 80 (797)
|||+++++|+||+++||.+||+|||||+|++|.+++.+|+..|+.+||+||.|||+|+||++++|+||+|+|||+|||||
T Consensus 142 mr~a~~~~g~dp~~inp~vPvdlviDHsvqvd~~g~~~a~~~n~~~e~~rN~Ery~flkw~~~af~~~~vvpPG~GI~HQ 221 (936)
T PLN00070 142 MRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQ 221 (936)
T ss_pred HHHHHHHcCCCccccCCCCCcceEecCceeecccCCcCHHHHHHHHHHHHhHHHhChhhhhhhhhcCccccCCCCceEee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeecCCCcccCCeEEecCCCCCccCcccceeccccHHHHHHHHccCceeeeCCcEEEEEEeccCCCCCchhh
Q 003763 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATD 160 (797)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~L~G~l~~gVtakD 160 (797)
|++||||++|+.++|+++|+++|||||||||+||||+|||||||+|++++|+|||+||++||||+|+|+|+|++||||||
T Consensus 222 V~lE~la~~v~~~~G~~~PdtlVGtDSHT~~~GglG~lg~GVGg~EaeaaMlgqp~~~~vPevvgV~LtG~L~~GVtAKD 301 (936)
T PLN00070 222 VNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATD 301 (936)
T ss_pred echhhhcccccccCCcccCCeEEeCCcccCCCCcccccEecccHHHHHHHHhCCeEEeeCCCEEEEEEEeecCCCCCHhH
Confidence 99999999999778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCcccccChhhhhhhhccCcccCceeeeecCChHHHHHHhhcCCCchhHHHHHHHHHH
Q 003763 161 LVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240 (797)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~LS~~~R~Ti~NMa~E~GA~~~~fp~D~~t~~yl~~~gr~~~~~~~~~~y~~~ 240 (797)
|||+|+++||++|++||+|||+|||+++||+++|||||||++|+|||+||||+|++|++||+.|||++++++++++|+|+
T Consensus 302 liL~i~~~Lr~~GvvGk~VEF~G~Gv~~LSv~dRaTIaNMa~E~GAt~g~FP~De~T~~YL~~tgR~~~~~~~v~~y~k~ 381 (936)
T PLN00070 302 LVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRA 381 (936)
T ss_pred HHHHHHHHhCcCccceEEEEEeCCccccCCHhHHhhHhhcchhhCceeeEecCChHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCcccEEEEEEcCCcccCccCCCCCCCccccCcccchhhhhhcccccCCCccCccccccccceeccCC
Q 003763 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHG 320 (797)
Q Consensus 241 ~~l~~~~~~~D~~a~Y~~~ieiDLs~leP~VA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 320 (797)
++||+++..+|++|.|+++++||||+|+|+||||++|||++||++++++|.+++..+++.+|+..+.++.....+++|+|
T Consensus 382 ~~l~~~~~~~D~da~Y~~vieiDLs~veP~VAgP~~P~~~v~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 461 (936)
T PLN00070 382 NKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKEAQSKVAKFSFHG 461 (936)
T ss_pred ccccccccCCCCCCceeEEEEEEcccceEecCCCcChhcCcCHHHhhhhHHHhhcccccccccccchhhhhhhhhhhccC
Confidence 99999766689999999999999999999999999999999999999999888876555444433323333335567899
Q ss_pred CcccccCccEEEEEEecCCCCCCHHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcCcHHHHHhcCcEEe
Q 003763 321 TPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIV 400 (797)
Q Consensus 321 ~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aG~~i~ 400 (797)
+++.+++|+|++|||||||||||||+|+||++|+|||+++|+||+||||++|+|||++|++||+++||+++|+++||.|+
T Consensus 462 ~~~~l~~g~V~ia~IgSCTNts~~dl~~aA~lLakkA~~~Glkv~p~Vk~~vaPGS~~V~~~l~~~Gl~~~L~~aGf~v~ 541 (936)
T PLN00070 462 QPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIV 541 (936)
T ss_pred CCCCcccCCEeEEEEECCCCCCcHHHHHHHHHHHHHHHhcCCccCCCccEEEeCCCHHHHHHHHHCCcHHHHHHcCCEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCCCCchHHHhhhccCceEEEeeeccCCCCCCCCCCccCCceecChHHHHHHhhcccccccCCCCccccCC
Q 003763 401 GYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480 (797)
Q Consensus 401 ~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vsS~NRNF~GR~g~~~~~~yLaSP~~vaAsAiaG~i~~d~~~~plg~~~ 480 (797)
+||||+||||+++++++++++|.+|+++++||||+||||+|||||..+++|||||++||||||+|+|++|+++||+|+++
T Consensus 542 ~~GCg~CIG~~g~l~~~~~~~i~~~~l~~~~VsS~NRNFeGR~gp~~~~~yLaSP~lVaA~AlaG~i~~d~~~dplg~~~ 621 (936)
T PLN00070 542 GYGCTTCIGNSGELDESVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGK 621 (936)
T ss_pred CCccccccCCCCCCCchhhhccccCCeeEEEEeccCCCCCCCCCCCCCceEEcCHHHHHHHHHcCCcccCCCCCCCccCC
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccccCCCChHHHHHHhhhccCchhhhhhcccccCCCcccccccCCCCCccccCCCCccccCCCCCccCCCCCCCC
Q 003763 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGP 560 (797)
Q Consensus 481 ~G~~v~l~diwP~~~ei~~~~~~~~~p~~~~~~y~~~~~~~~~~~~l~~~~~~~~~w~~~st~i~~pp~f~~~~~~~~~~ 560 (797)
+|++|||+||||+.+||++++.+.++|++|.+.|.+++.+++.|++|+.|.+.+|+||++||||++||||++++..++++
T Consensus 622 ~G~~v~l~diwP~~~ei~~~~~~~v~~~~f~~~y~~~~~g~~~w~~l~~p~~~~~~wd~~Styi~~pp~f~~~~~~~~~~ 701 (936)
T PLN00070 622 DGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPKSTYIHEPPYFKNMTMSPPGP 701 (936)
T ss_pred CCCEecccCCCCChHHHHHHHHccCCHHHhhhhhhhccCCccccccCCCCCCCcccCCCCcceeecCCCCCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred CCcccceEEeecCCCcccCccccCCCCCCCChhhhHHHHcCCCccccccccccCCchhhhccccccchhhhhhhcCCCCC
Q 003763 561 HGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVG 640 (797)
Q Consensus 561 ~~i~~~~vl~~~gd~itTD~I~PAG~i~~~s~a~~~L~~~g~~~~~~n~yg~rrgn~evm~rg~F~n~r~~n~~~~~~~~ 640 (797)
.+|+++|+|+++||+||||||||||+|+++||||+||+++|+.++|||+||+||||||||+||||+|+|++|+|++|++|
T Consensus 702 ~~i~~arvL~~lgD~iTTDHISPAG~i~~~spag~yL~~~gv~~~dfnsygsrRgN~evm~rgtFaNir~~N~~~~g~~g 781 (936)
T PLN00070 702 HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVG 781 (936)
T ss_pred cCccCcEEEEEECCCCcccccCCCCCCCCCChHHHHHHhcCCChhhccccccccCcchhhhceeccchhhhhhhcCCCcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCcccccchHHHHHHhhCCCeEEEeCCccCCCCcchhhhhhhhhcCccEEEecchhhHhhhhcccCCccceec
Q 003763 641 PKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720 (797)
Q Consensus 641 ~~~~~~~~~~~~~v~~~a~~y~~~g~~~iiVaG~NfG~GSSRE~Aa~a~~~lGv~aVIA~SFarIf~~Nlin~Gilpl~~ 720 (797)
++|.|+|+|+.|+|||+|++|+++|+++|||||+|||||||||||||++++|||+||||+||+||||+||+|||||||+|
T Consensus 782 ~~t~~~p~g~~~~i~daA~~Y~~~g~p~iIvaG~nyG~GSSRe~AA~~~~~lGvkaVIA~SF~rIhrsNli~~GiLPL~f 861 (936)
T PLN00070 782 PKTVHIPTGEKLSVFDAAMKYKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 861 (936)
T ss_pred CeeEecCCCceeeHHHHHHHHHhcCCceEEEccCccCCCCcHHHHHHHHHHhCCcEEEEccHHHHHHhhhhhcCcceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhcccCCCCeEEEEeCCCCcccCCCCcEEEEEcCCCeEEEEEecCCCHHHHHHHHhcCHHHHHHHHHhh
Q 003763 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 794 (797)
Q Consensus 721 ~~~~~~~~l~~~~~~~~~idl~~~~~~~~~g~~v~v~~~~g~~~~~~~~~~~~~e~~i~~aGGll~~v~~~~~~ 794 (797)
.++++++++++.+++.++|++++.+.+++||++++++..+|++|++.++++++.|++|+++||+|||+++++++
T Consensus 862 ~~~~~~~~l~~~g~~~~~i~l~~~~~~l~p~~~~~v~~~~g~~~~~~~r~dt~~E~~~~~~GGiL~~v~r~~~~ 935 (936)
T PLN00070 862 KSGEDADTLGLTGHERYTIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYFDHGGILPYVIRNLIK 935 (936)
T ss_pred CCcccHHHHhcCCCceEEEeccccccccCCCCEEEEEeCCCeEEEEEEeCCCHHHHHHHHcCCHHHHHHHHHhh
Confidence 99999999998888999999877666789999888876788999999999999999999999999999999875
|
|
| >PTZ00092 aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR01341 aconitase_1 aconitate hydratase 1 | Back alignment and domain information |
|---|
| >PRK12881 acnA aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >PRK09277 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >COG1048 AcnA Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01340 aconitase_mito aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >PRK07229 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >TIGR00139 h_aconitase homoaconitase | Back alignment and domain information |
|---|
| >PRK11413 putative hydratase; Provisional | Back alignment and domain information |
|---|
| >KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01586 AcnA_IRP Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PRK12466 isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05478 isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >TIGR01343 hacA_fam homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >cd01580 AcnA_IRP_Swivel Aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK14023 homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >TIGR02084 leud 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK01641 leuD isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain | Back alignment and domain information |
|---|
| >cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >cd00404 Aconitase_swivel Aconitase swivel domain | Back alignment and domain information |
|---|
| >cd01674 Homoaconitase_Swivel Homoaconitase swivel domain | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >cd01576 AcnB_Swivel Aconitase B swivel domain | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14812 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins | Back alignment and domain information |
|---|
| >COG1679 Predicted aconitase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01355 AcnX Putative Aconitase X catalytic domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 797 | ||||
| 3snp_A | 908 | Crystal Structure Analysis Of Iron Regulatory Prote | 0.0 | ||
| 2b3x_A | 888 | Structure Of An Orthorhombic Crystal Form Of Human | 0.0 | ||
| 1ami_A | 754 | Steric And Conformational Features Of The Aconitase | 7e-51 | ||
| 1aco_A | 754 | Crystal Structure Of Aconitase With Transaconitate | 9e-51 | ||
| 1c96_A | 753 | S642a:citrate Complex Of Aconitase Length = 753 | 2e-50 | ||
| 1nis_A | 754 | Crystal Structure Of Aconitase With Trans-Aconitate | 2e-50 | ||
| 5acn_A | 754 | Structure Of Activated Aconitase. Formation Of The | 4e-50 | ||
| 1b0j_A | 754 | Crystal Structure Of Aconitase With Isocitrate Leng | 8e-50 | ||
| 1c97_A | 753 | S642a:isocitrate Complex Of Aconitase Length = 753 | 9e-50 | ||
| 1b0m_A | 753 | Aconitase R644q:fluorocitrate Complex Length = 753 | 1e-49 | ||
| 2pkp_A | 170 | Crystal Structure Of 3-Isopropylmalate Dehydratase | 5e-07 | ||
| 1v7l_A | 163 | Structure Of 3-Isopropylmalate Isomerase Small Subu | 6e-06 |
| >pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 | Back alignment and structure |
|
| >pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 | Back alignment and structure |
| >pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 | Back alignment and structure |
| >pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 | Back alignment and structure |
| >pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 | Back alignment and structure |
| >pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 | Back alignment and structure |
| >pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 | Back alignment and structure |
| >pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 | Back alignment and structure |
| >pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud) From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271) Length = 170 | Back alignment and structure |
| >pdb|1V7L|A Chain A, Structure Of 3-Isopropylmalate Isomerase Small Subunit From Pyrococcus Horikoshii Length = 163 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 | Back alignment and structure |
|---|
Score = 1575 bits (4080), Expect = 0.0
Identities = 485/793 (61%), Positives = 614/793 (77%), Gaps = 4/793 (0%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDA+ KLGGD KINP+ P DLVIDHS+QVD R +++Q N + EF RN+ERF FLKW
Sbjct: 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS AFHNM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GW
Sbjct: 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGW 218
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
GVGGIEAEA MLGQP+SMVLP V+G++L GK VT+TD+VLT+T+ LR+ GVVG FVE
Sbjct: 219 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 278
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
F+G G+++LS+ADRATIANM PEYGAT FFPVD V++ YL TGR ++ + I+ YL+A
Sbjct: 279 FFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
MF D+++P + ++ +EL+L+ VVPC SGPKRP D+V +++MK D+ +CL + GF
Sbjct: 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGF + E+ + F + T L HG VVIAAITSCTNTSNPSVMLGA L+AKKA +
Sbjct: 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDA 458
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GL V P+IKTSL+PGSGVVT YLQ SG+ YL+ LGF +VGYGC TCIGNSG + + V
Sbjct: 459 GLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVE 518
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AIT+ D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV
Sbjct: 519 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK 540
G+++FL+DIWP+ +E+ V ++ V+P MFK Y+ I N WN L+ PS L+ W+ K
Sbjct: 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSK 638
Query: 541 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 600
STYI PP+F+++T+ P + AY LLN GDS+TTDHISPAG+I ++SPAA+YL R
Sbjct: 639 STYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNR 698
Query: 601 GVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMR 660
G+ R+FNSYGSRRGND +MARGTFANIRL+N+ LN + P+TIH+P+GE L VFDAA R
Sbjct: 699 GLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAER 757
Query: 661 YKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+ G ++LAG EYG+GSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL +
Sbjct: 758 YQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEY 817
Query: 721 KPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD 780
PGE+A+ GLTG ERYTI +P ++P V+V D+GK+F V+RFDT+VEL YF
Sbjct: 818 LPGENADALGLTGQERYTIIIP---ENLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFL 874
Query: 781 HGGILQYVIRNLI 793
+GGIL Y+IR +
Sbjct: 875 NGGILNYMIRKMA 887
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Length = 170 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Length = 213 | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Length = 171 | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Length = 203 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 797 | |||
| 2b3y_A | 888 | Iron-responsive element binding protein 1; IRP1 IR | 100.0 | |
| 1c96_A | 753 | Mitochondrial aconitase; lyase, tricarboxylic acid | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 2pkp_A | 170 | Homoaconitase small subunit; beta barrel, amino-ac | 100.0 | |
| 2hcu_A | 213 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 1v7l_A | 163 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 3vba_A | 176 | Isopropylmalate/citramalate isomerase small subun; | 100.0 | |
| 3q3w_A | 203 | 3-isopropylmalate dehydratase small subunit; struc | 100.0 | |
| 3h5j_A | 171 | 3-isopropylmalate dehydratase small subunit; leuci | 100.0 |
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-220 Score=1918.98 Aligned_cols=789 Identities=61% Similarity=1.078 Sum_probs=747.7
Q ss_pred ChHHHHhhCCCCCccCCCCceEEEecCcccCCCCCchhHHHHhhHHHHHHhhhhhhHHhhhccccCcceeeCCCCceecc
Q 003763 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 80 (797)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~l~iDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~~~~~~~~~pg~GI~Hq 80 (797)
||++++++|+||.++||.+|+++++||++|++..+..++..+|+.++|+||+|+|+||+|++++|.+++|+|||+|||||
T Consensus 99 mr~a~~~~g~d~~ki~p~~pv~lv~DH~v~~~~~~~~da~~~n~~~e~~rN~e~~~fL~w~~~~f~~~~~~~pG~GI~Hq 178 (888)
T 2b3y_A 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQ 178 (888)
T ss_dssp HHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHH
T ss_pred HHHHHHhcCCChhhcCCCCCeeEEeCCCCCcCCccccCHHHHHHHHHHHHhcchHHHHHHHHHhccCCCCCCCCCCCcce
Confidence 68899999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred cccccccceeecCCCcccCCeEEecCCCCCccCcccceeccccHHHHHHHHccCceeeeCCcEEEEEEeccCCCCCchhh
Q 003763 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATD 160 (797)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~L~G~l~~gVtakD 160 (797)
|++||||++|+.++|+++|+|+|||||||||+||||+||||||++|++++|+||++||++||+|+|+|+|+|++||||||
T Consensus 179 v~lE~la~~v~~~~G~~~P~tlVGtDSHT~t~GglG~la~GVGg~eae~~mag~~~~~~~PevvgV~ltG~L~~gVtakD 258 (888)
T 2b3y_A 179 VNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTD 258 (888)
T ss_dssp HHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHH
T ss_pred ehhhhccccccccCcccccCeEEecCCCccccCcceeEEEccCHHHHHHHHhcCcEeecCCCEEEEEEEccCCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCcccccChhhhhhhhccCcccCceeeeecCChHHHHHHhhcCCCchhHHHHHHHHHH
Q 003763 161 LVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240 (797)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~LS~~~R~Ti~NMa~E~GA~~~~fp~D~~t~~yl~~~gr~~~~~~~~~~y~~~ 240 (797)
|||+|+++|+++|++||+|||+||||++||+++|||||||++|+|||+||||+|++|++||+.+||++++++++++|+++
T Consensus 259 viL~i~~~l~~~G~vGk~vEF~G~gv~~LS~~~R~TI~NMa~E~GAt~g~fp~De~T~~YL~~~gr~~~~~~~~e~y~~a 338 (888)
T 2b3y_A 259 IVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338 (888)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCccceEEEEecCccccccccchhhhhhcchhhCCeeEEecCcHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred hhhhcccCCCC-CCCcccEEEEEEcCCcccCccCCCCCCCccccCcccchhhhhhcccccCCCccCccccccccceeccC
Q 003763 241 NKMFVDYSEPQ-SERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFH 319 (797)
Q Consensus 241 ~~l~~~~~~~D-~~a~Y~~~ieiDLs~leP~VA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (797)
+++|++. .+| ++|.|+++++||||+|+|+||||++|||++||++++++|.+++..+++++|+..+.......++++|+
T Consensus 339 ~~l~~~l-~~d~~dA~Yd~~ieiDLs~leP~VAgP~~P~~~~plse~~~~~~~~l~~~~g~~g~~~~~~~~~~~~~~~~~ 417 (888)
T 2b3y_A 339 VGMFRDF-NDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYD 417 (888)
T ss_dssp HTCCCCT-TCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEET
T ss_pred HHHHhcc-CCCCCCCceEEEEEEEhhheeEeecCCCCcccccChHHhhhhHHHhhhcccccccccccchhhcccceeecC
Confidence 9999753 235 89999999999999999999999999999999999998887765543333321110100012346788
Q ss_pred CCcccccCccEEEEEEecCCCCCCHHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcCcHHHHHhcCcEE
Q 003763 320 GTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHI 399 (797)
Q Consensus 320 g~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aG~~i 399 (797)
|+++.|.||+|++|||||||||||||+|+||++|||+|+++|+||+||||++|+|||++|++||+++||+++|+++||.|
T Consensus 418 g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLak~A~~kG~kv~p~Vk~~v~PGS~~V~~~l~~~Gl~~~l~~aGf~i 497 (888)
T 2b3y_A 418 NTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDV 497 (888)
T ss_dssp TEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHHHHHHTTCCB
T ss_pred CccccccCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCceEEEeCCCHHHHHHHHHcCcHHHHHHcCCEE
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCccccCCCCCCchHHHhhhccCceEEEeeeccCCCCCCCCCCccCCceecChHHHHHHhhcccccccCCCCccccC
Q 003763 400 VGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVG 479 (797)
Q Consensus 400 ~~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vsS~NRNF~GR~g~~~~~~yLaSP~~vaAsAiaG~i~~d~~~~plg~~ 479 (797)
++||||+||||+++++++++.+|.+||+++++|||+||||+||||+..+++|||||+|||||||+|+|++|+++||++.+
T Consensus 498 ~~~GC~~CiG~~~~l~~~~~~~i~~ge~~~~~vsS~NRNFeGR~g~~~~~~yLaSP~lvaA~AiaG~i~~d~~~dpl~~~ 577 (888)
T 2b3y_A 498 VGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVN 577 (888)
T ss_dssp CCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSCCCTTTSCSEEE
T ss_pred eCCCCcceeCCCCCCCchhhhhhccCCeeEEEEeccCCCcCcCCCCCccccEecCHHHHHHHHhcCeeecccccCccccC
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred CCCceeccccCCCChHHHHHHhhhccCchhhhhhcccccCCCcccccccCCCCCccccCCCCccccCCCCCccCCCCCCC
Q 003763 480 KDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPG 559 (797)
Q Consensus 480 ~~G~~v~l~diwP~~~ei~~~~~~~~~p~~~~~~y~~~~~~~~~~~~l~~~~~~~~~w~~~st~i~~pp~f~~~~~~~~~ 559 (797)
++|+++||+||||+.+|+++++.+.+++++|.+.|..++.+++.|+.++.+.++.|+|+++||||++||||++++..+++
T Consensus 578 ~~G~~v~l~diwP~~~ei~~~~~~~~~~~~f~~~y~~~~~~~~~~~~~~~~~~~~~~w~~~St~i~~~p~f~~~~~~~~~ 657 (888)
T 2b3y_A 578 AKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQP 657 (888)
T ss_dssp TTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCCCSSCCCCTTCSSCCCCGGGTTCCSSCCC
T ss_pred CCCCcccccccCCchhhhHHHHHhcCCHHHhhhhhccccCCccccccCCCCCCCccccCCCcccccCCCCccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999888888
Q ss_pred CCCcccceEEeecCCCcccCccccCCCCCCCChhhhHHHHcCCCccccccccccCCchhhhccccccchhhhhhhcCCCC
Q 003763 560 PHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEV 639 (797)
Q Consensus 560 ~~~i~~~~vl~~~gd~itTD~I~PAG~i~~~s~a~~~L~~~g~~~~~~n~yg~rrgn~evm~rg~F~n~r~~n~~~~~~~ 639 (797)
++++.++++|+++|||||||||||||+|+++||||+||+++|+++++|||||+||||||||+||+|+|||+.|+|.+ .+
T Consensus 658 ~~~~~~~~~l~~~gdnitTDhIsPAg~i~~~s~ag~~L~~~gv~~~~f~syg~rRgn~~vm~rg~F~n~r~~n~l~~-~~ 736 (888)
T 2b3y_A 658 PKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLN-KQ 736 (888)
T ss_dssp CCCEEEEEEEEEBCSCCBHHHHSCCSCCCSSSHHHHHHHHTTCCGGGCCCTGGGTTCHHHHHHTTTCCTTCEETTTT-EE
T ss_pred cccccCcEEEEEecCCccccccccCccccCCCHHHHHHHhcCCChHHhccccccccCHHHHhhhccccccccccccc-cc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999986 89
Q ss_pred CCceeccCCCcccccchHHHHHHhhCCCeEEEeCCccCCCCcchhhhhhhhhcCccEEEecchhhHhhhhcccCCcccee
Q 003763 640 GPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLC 719 (797)
Q Consensus 640 ~~~~~~~~~~~~~~v~~~a~~y~~~g~~~iiVaG~NfG~GSSRE~Aa~a~~~lGv~aVIA~SFarIf~~Nlin~Gilpl~ 719 (797)
|++|.++|+|+.+++||++++|+++|.++|||||+|||||||||||||+++++||+||||+||+|||++||+|||||||+
T Consensus 737 g~~t~~~p~g~~~~~~d~a~~y~~~g~~~iivaG~nfG~GSSREhAa~a~~~~Gi~aVIA~SFarIf~~Nli~~Gllpl~ 816 (888)
T 2b3y_A 737 APQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLE 816 (888)
T ss_dssp CSEEEETTTTEEEEHHHHHHHHHHTTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCHHHHHHHHHHTCEEEE
T ss_pred CCceeecCCCccccchhhHHHHHhcCCceEEECCCCCCCCccHHHHHHHHHHcCeeEEEEhhHHHHHHhhhhhcCCceEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhhcccCCCCeEEEEeCCCCcccCCCCcEEEEEcCCCeEEEEEecCCCHHHHHHHHhcCHHHHHHHHHhh
Q 003763 720 FKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 794 (797)
Q Consensus 720 ~~~~~~~~~l~~~~~~~~~idl~~~~~~~~~g~~v~v~~~~g~~~~~~~~~~~~~e~~i~~aGGll~~v~~~~~~ 794 (797)
|+++++++++++.++++++|++.+ .++||+.+++...+|++|++.++++++.|++|+++||+|||+++++++
T Consensus 817 ~~~~~~~~~~~~~~~~~i~i~l~~---~~~~g~~v~v~~~~G~~~~~~~~~~t~~e~~~~~aGGiL~yv~~~~~~ 888 (888)
T 2b3y_A 817 YLPGENADALGLTGQERYTIIIPE---NLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKMAK 888 (888)
T ss_dssp ECTTCCHHHHTCCSCSCEEECCCS---SCCTTCEEEEEETTSCEEEEEECCCSHHHHHHHHHTSHHHHHHHHHHC
T ss_pred ecccccHHHhccCCCceEEEEccc---ccCCCcEEEEEeCCCeEEEEEecCCCHHHHHHHHcCCHHHHHHHHhhC
Confidence 999999998888888999999764 488998776644678899999998999999999999999999999863
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >3vba_A Isopropylmalate/citramalate isomerase small subun; lyase, LEUD, cytosol; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 797 | ||||
| d2b3ya2 | 629 | c.83.1.1 (A:2-630) Iron-responsive element binding | 0.0 | |
| d1acoa2 | 527 | c.83.1.1 (A:2-528) Aconitase A, N-terminal domain | 1e-100 | |
| d2b3ya1 | 259 | c.8.2.1 (A:631-889) ron-responsive element binding | 1e-95 | |
| d1l5ja3 | 490 | c.83.1.1 (A:373-862) Aconitase B, C-terminal domai | 9e-63 | |
| d1acoa1 | 226 | c.8.2.1 (A:529-754) Aconitase A, C-terminal domain | 1e-53 | |
| d1v7la_ | 162 | c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc | 3e-24 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 592 bits (1526), Expect = 0.0
Identities = 327/531 (61%), Positives = 411/531 (77%)
Query: 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW 60
MRDA+ KLGGD KINP+ P DLVIDHS+QVD R +++Q N + EF RN+ERF FLKW
Sbjct: 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158
Query: 61 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS AFHNM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GW
Sbjct: 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGW 218
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVE 180
GVGGIEAEA MLGQP+SMVLP V+G++L GK VT+TD+VLT+T+ LR+ GVVG FVE
Sbjct: 219 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 278
Query: 181 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240
F+G G+++LS+ADRATIANM PEYGAT FFPVD V++ YL TGR ++ + I+ YL+A
Sbjct: 279 FFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338
Query: 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF 300
MF D+++P + ++ +EL+L+ VVPC SGPKRP D+V +++MK D+ +CL + GF
Sbjct: 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398
Query: 301 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACEL 360
KGF + E+ + F + T L HG VVIAAITSCTNTSNPSVMLGA L+AKKA +
Sbjct: 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDA 458
Query: 361 GLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAA 420
GL V P+IKTSL+PGSGVVT YLQ SG+ YL+ LGF +VGYGC TCIGNSG + + V
Sbjct: 459 GLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVE 518
Query: 421 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480
AIT+ D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV
Sbjct: 519 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPS 531
G+++FL+DIWP+ +E+ V ++ V+P MFK Y+ I N WN L+ PS
Sbjct: 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 797 | |||
| d2b3ya2 | 629 | Iron-responsive element binding protein 1, N-termi | 100.0 | |
| d1acoa2 | 527 | Aconitase A, N-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1l5ja3 | 490 | Aconitase B, C-terminal domain {Escherichia coli [ | 100.0 | |
| d2b3ya1 | 259 | ron-responsive element binding protein 1, C-termin | 100.0 | |
| d1acoa1 | 226 | Aconitase A, C-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1v7la_ | 162 | Isopropylmalate isomerase LeuD {Pyrococcus horikos | 100.0 | |
| d1l5ja2 | 212 | Aconitase B, second N-terminal domain {Escherichia | 97.33 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-159 Score=1357.81 Aligned_cols=530 Identities=62% Similarity=1.075 Sum_probs=515.2
Q ss_pred ChHHHHhhCCCCCccCCCCceEEEecCcccCCCCCchhHHHHhhHHHHHHhhhhhhHHhhhccccCcceeeCCCCceecc
Q 003763 1 MRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 80 (797)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~l~iDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~~~~~~~~~pg~GI~Hq 80 (797)
|||+++++|+||.+|||.+||+|+|||+||++..+++++...|+.+||+||.|||+||||++++|+||+|+|||+|||||
T Consensus 99 mrda~~~~g~dp~~i~p~~p~~lviDHsv~~~~~~~~~~~~~n~~~e~~rn~er~~fl~w~~~~~~~~~~~pPg~GI~HQ 178 (629)
T d2b3ya2 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQ 178 (629)
T ss_dssp HHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHH
T ss_pred HHHHHHHhCCCccccCCCCcceEEECCCeEeccCCCchhhhhchhhhhhhhHHHHHHHHHHHHHhhcccccccccchhhH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeecCCCcccCCeEEecCCCCCccCcccceeccccHHHHHHHHccCceeeeCCcEEEEEEeccCCCCCchhh
Q 003763 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATD 160 (797)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~L~G~l~~gVtakD 160 (797)
||+||||++|+.++|+++||++|||||||||+||||+|||||||+|++++|+||++||++||||+|+|+|+|++||||||
T Consensus 179 vnlE~la~~v~~~~~~~~pdtlVGtDSHT~~~GalG~lg~GVGg~Eae~amlg~~~~~~vPevvgv~L~G~L~~gVtakD 258 (629)
T d2b3ya2 179 VNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTD 258 (629)
T ss_dssp HHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHH
T ss_pred HHHHHhcccccCCCCeEEeeeEEecCCCccccccccceecCcchHHHHHHHhCCcEEEecCceEEEEEEeccCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCcccccChhhhhhhhccCcccCceeeeecCChHHHHHHhhcCCCchhHHHHHHHHHH
Q 003763 161 LVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRA 240 (797)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~LS~~~R~Ti~NMa~E~GA~~~~fp~D~~t~~yl~~~gr~~~~~~~~~~y~~~ 240 (797)
|||+|+++||++|++||+|||+|||+++||+++|||||||++|+|||+||||+|++|++||+.+||+++.++++++|.++
T Consensus 259 liL~i~~~L~~~G~vgk~VEF~G~gi~~LS~~dRaTI~NMa~E~GAt~gifp~De~T~~YL~~tgR~~~~~~~ve~y~~a 338 (629)
T d2b3ya2 259 IVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338 (629)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCcceEEEEeccccccccCHHHhhhhhhcccccCceEEEEccccchhhhhhhhcccccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCcccEEEEEEcCCcccCccCCCCCCCccccCcccchhhhhhcccccCCCccCccccccccceeccCC
Q 003763 241 NKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHG 320 (797)
Q Consensus 241 ~~l~~~~~~~D~~a~Y~~~ieiDLs~leP~VA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 320 (797)
|++|++...+|++|.|+++++||||+|+|+||+|++|||++||+|++.+|.+++..+.+++++.++.+.......+.+++
T Consensus 339 ~~l~~~~~~~d~da~Y~~vieiDLs~veP~VAgP~~P~d~v~l~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (629)
T d2b3ya2 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDN 418 (629)
T ss_dssp HTCCCCTTCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEETT
T ss_pred HHhhhhccccccccCcceEEEEehhHceeecCCCCCccceeECCccCcChhhhhhhhhhhcccchhhhhhhhhhhhhhcc
Confidence 99999876678899999999999999999999999999999999999999999988777777766655555555666788
Q ss_pred CcccccCccEEEEEEecCCCCCCHHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcCcHHHHHhcCcEEe
Q 003763 321 TPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIV 400 (797)
Q Consensus 321 ~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aG~~i~ 400 (797)
..+.+.||+|++|||||||||||||+|+||++|+++|+++|++++||||++|+|||++|++||+++||+++|+++||.|+
T Consensus 419 ~~~~l~~g~V~ia~IgSCTN~s~~dl~~AA~lLa~kaV~~Gl~v~p~Vk~~v~PGS~~V~~~le~~Gl~~~L~~aGf~i~ 498 (629)
T d2b3ya2 419 TEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVV 498 (629)
T ss_dssp EEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHHHHHHTTCCBC
T ss_pred ccccccCCcEEEEEEecCCCCCcHHHHHHHHHHhhhhhhcCCcccceeeEEEeccchhhhHHHHhCCchhhhhhceeEEe
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCCCCchHHHhhhccCceEEEeeeccCCCCCCCCCCccCCceecChHHHHHHhhcccccccCCCCccccCC
Q 003763 401 GYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGK 480 (797)
Q Consensus 401 ~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vsS~NRNF~GR~g~~~~~~yLaSP~~vaAsAiaG~i~~d~~~~plg~~~ 480 (797)
+|||++|+||+|+++++++++|.+||+++++|||+||||+||||+..+++|||||+|||||||+|+|++|+.+||+|+|+
T Consensus 499 ~~GC~~CiGnsGpl~~~~~~~i~~gdl~~~~V~S~NRNFeGR~g~~~~~~yLaSP~lVaA~AiaG~I~id~~~eplg~~~ 578 (629)
T d2b3ya2 499 GYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578 (629)
T ss_dssp CSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSCCCTTTSCSEEET
T ss_pred cccccccCCCCCCCCcchhhhcccCCeeEeeecccCCCCCcCCCCCCCCeEECCHHHHHHHHhceeeecCCCcCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccccCCCChHHHHHHhhhccCchhhhhhcccccCCCcccccccCC
Q 003763 481 DGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVP 530 (797)
Q Consensus 481 ~G~~v~l~diwP~~~ei~~~~~~~~~p~~~~~~y~~~~~~~~~~~~l~~~ 530 (797)
+|++|||+||||+.+||++++.+.++|++|.+.|..++.|+++|++|+.|
T Consensus 579 ~G~~V~L~diwPs~~Ei~~~~~~~v~~~~f~~~y~~v~~g~~~W~~l~~p 628 (629)
T d2b3ya2 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATP 628 (629)
T ss_dssp TTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCC
T ss_pred CCCEEecCCCCCCHHHHHHHHHhccChhhhHHHHHHhccCChhhccCCCC
Confidence 99999999999999999999999999999999999999999999999876
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|