Citrus Sinensis ID: 003778
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 796 | ||||||
| 359473015 | 790 | PREDICTED: phosphate transporter PHO1 ho | 0.988 | 0.996 | 0.831 | 0.0 | |
| 359473017 | 780 | PREDICTED: phosphate transporter PHO1 ho | 0.976 | 0.996 | 0.818 | 0.0 | |
| 224108581 | 782 | pho1-like protein [Populus trichocarpa] | 0.973 | 0.991 | 0.809 | 0.0 | |
| 224099223 | 801 | pho1-like protein [Populus trichocarpa] | 0.989 | 0.983 | 0.794 | 0.0 | |
| 255546919 | 760 | xenotropic and polytropic murine leukemi | 0.928 | 0.972 | 0.828 | 0.0 | |
| 356496020 | 791 | PREDICTED: phosphate transporter PHO1 ho | 0.989 | 0.996 | 0.767 | 0.0 | |
| 356500006 | 789 | PREDICTED: phosphate transporter PHO1 ho | 0.986 | 0.994 | 0.766 | 0.0 | |
| 356500008 | 797 | PREDICTED: phosphate transporter PHO1 ho | 0.986 | 0.984 | 0.757 | 0.0 | |
| 356496022 | 781 | PREDICTED: phosphate transporter PHO1 ho | 0.977 | 0.996 | 0.754 | 0.0 | |
| 449434680 | 790 | PREDICTED: phosphate transporter PHO1 ho | 0.987 | 0.994 | 0.756 | 0.0 |
| >gi|359473015|ref|XP_003631230.1| PREDICTED: phosphate transporter PHO1 homolog 1 isoform 2 [Vitis vinifera] gi|297737904|emb|CBI27105.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1331 bits (3445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/799 (83%), Positives = 721/799 (90%), Gaps = 12/799 (1%)
Query: 1 MVKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFAST 60
MVKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLL N N + +Q S T
Sbjct: 1 MVKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLSTATN---NIPTANQQ--YSLPKT 55
Query: 61 FISSLGKKFSSFGQHQHREHHGAIQVHKKLASSASKGDMYETELLEQFADTDATKEFFEC 120
SS+ ++FS FG R+ HG IQVHKKLASSASKGD+YETELLEQ ADTDA EFF C
Sbjct: 56 LFSSI-RRFSLFGHE--RKDHGVIQVHKKLASSASKGDLYETELLEQIADTDAANEFFAC 112
Query: 121 LDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALKKKRGKGASSQDSKEDESIS 180
LDMQLNKVNQFY+ KEKEFL+RGESLK+QMEILIELK+ALK++R KG+++QD KED SIS
Sbjct: 113 LDMQLNKVNQFYRTKEKEFLERGESLKEQMEILIELKSALKRQRNKGSTAQDPKEDASIS 172
Query: 181 CTISCEE-SIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLS 239
CTISCEE SI+D+TEQE +DN+ DE E+N+V F+DS +SDEMGKSMRMKR D KL TLS
Sbjct: 173 CTISCEEESIKDKTEQEPAQDNTADEFESNDVQFSDSLKSDEMGKSMRMKREDGKLRTLS 232
Query: 240 GGVYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKI-PEGSNRLHINKTKLHH 298
G V+NCQGKNLRI IPLTTPSRT+SA+SYL+W DLVNQSS+K PEGS +L+INKTKLHH
Sbjct: 233 GRVFNCQGKNLRINIPLTTPSRTLSAISYLVWGDLVNQSSRKCGPEGS-KLNINKTKLHH 291
Query: 299 AEKMIRGALIELYKGLGYLKTYRNLNMLAFIKILKKFDKVTGKQVLPIYLKVVESSYFNS 358
AEKMI+GA IELYKGLGYLKTYRNLNMLAF+KILKKFDKVTGKQVLPIYLKVVESSYFNS
Sbjct: 292 AEKMIKGAFIELYKGLGYLKTYRNLNMLAFVKILKKFDKVTGKQVLPIYLKVVESSYFNS 351
Query: 359 SDKVMNLADEVEELFIKHFADENRRKAMKYLKIHQRKESHGVTFFIGLFTGCFIALLAGY 418
SDKVM L DEVEELF KHFA+E++RK MKYLK HQRKESH VTFFIGLFTGCFIAL AGY
Sbjct: 352 SDKVMKLEDEVEELFTKHFAEEDKRKTMKYLKPHQRKESHTVTFFIGLFTGCFIALFAGY 411
Query: 419 VIMAHITGMYRPRPDTVYMETVYPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELA 478
VIMAHI+GMYR + DT+YMETVYPVLSMFSLLFLH FLYGCNI MW+KARINYSFIFELA
Sbjct: 412 VIMAHISGMYRGQSDTIYMETVYPVLSMFSLLFLHFFLYGCNIVMWRKARINYSFIFELA 471
Query: 479 PTKELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYSYSQVQAIPGLLLLIFLLLLVCPF 538
PTKELK+RDVFLICTTSMTAVVGVMFVHLSL+ KG SYS+VQAIPGLL L+FLLLLVCPF
Sbjct: 472 PTKELKYRDVFLICTTSMTAVVGVMFVHLSLVAKGNSYSRVQAIPGLLCLLFLLLLVCPF 531
Query: 539 NIFYRSSRYCFLRVIRNIILSPLYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGSFK 598
NI Y+SSRY FLRVIRN ILSPLYKV+MLDFFMADQLCSQVP+LRNLE+VACYYITGSFK
Sbjct: 532 NIIYKSSRYRFLRVIRNTILSPLYKVVMLDFFMADQLCSQVPMLRNLEYVACYYITGSFK 591
Query: 599 TQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSHLINLGKYVSAMLAAGA 658
TQDYG+CMR KHYRDLAYAVSFLPYYWRAMQCARRWFDEGQT+HL+NLGKYVSAMLAAGA
Sbjct: 592 TQDYGFCMRTKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTTHLVNLGKYVSAMLAAGA 651
Query: 659 KVVYEKERSVGWLCLVVVVSSGATVYQLYWDFVKDWGLLQVNSKNPWLRNELMLRRKCIY 718
KV YEKERSVGWLCLVVV+SS ATVYQLYWD+V+DWGLLQ +SKNPWLRNELMLRRK IY
Sbjct: 652 KVAYEKERSVGWLCLVVVMSSAATVYQLYWDYVRDWGLLQFHSKNPWLRNELMLRRKIIY 711
Query: 719 YFSMGLNLVLRLAWFQTVLHSNFEHVDYRVTGLFLAALEVIRRGIWNFYRLENEHLNNAG 778
YFSMGLNLVLRLAW QTVLHSNFE VDYRVTGLFLAALEVIRRG WNFYRLENEHLNNAG
Sbjct: 712 YFSMGLNLVLRLAWLQTVLHSNFEGVDYRVTGLFLAALEVIRRGQWNFYRLENEHLNNAG 771
Query: 779 KFRAVKTVPLPF-EIDEED 796
KFRAVKTVPLPF E+D+ED
Sbjct: 772 KFRAVKTVPLPFHEVDDED 790
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473017|ref|XP_002280608.2| PREDICTED: phosphate transporter PHO1 homolog 1 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224108581|ref|XP_002314898.1| pho1-like protein [Populus trichocarpa] gi|222863938|gb|EEF01069.1| pho1-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224099223|ref|XP_002311409.1| pho1-like protein [Populus trichocarpa] gi|222851229|gb|EEE88776.1| pho1-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255546919|ref|XP_002514517.1| xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis] gi|223546121|gb|EEF47623.1| xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356496020|ref|XP_003516868.1| PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356500006|ref|XP_003518826.1| PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356500008|ref|XP_003518827.1| PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356496022|ref|XP_003516869.1| PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449434680|ref|XP_004135124.1| PREDICTED: phosphate transporter PHO1 homolog 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 796 | ||||||
| TAIR|locus:2012458 | 784 | PHO1;H1 "AT1G68740" [Arabidops | 0.974 | 0.989 | 0.689 | 5.8e-288 | |
| TAIR|locus:2090930 | 782 | PHO1 "phosphate 1" [Arabidopsi | 0.962 | 0.979 | 0.466 | 2.9e-190 | |
| UNIPROTKB|Q6K991 | 815 | PHO1-2 "Phosphate transporter | 0.689 | 0.673 | 0.506 | 2e-165 | |
| TAIR|locus:2092783 | 800 | AT3G29060 [Arabidopsis thalian | 0.623 | 0.62 | 0.413 | 1.9e-120 | |
| TAIR|locus:2014779 | 813 | AT1G14040 [Arabidopsis thalian | 0.879 | 0.861 | 0.347 | 4.7e-116 | |
| TAIR|locus:2206742 | 751 | AT1G35350 [Arabidopsis thalian | 0.638 | 0.676 | 0.410 | 6.9e-115 | |
| TAIR|locus:2056941 | 823 | AT2G03240 [Arabidopsis thalian | 0.876 | 0.848 | 0.333 | 2.4e-114 | |
| TAIR|locus:2200575 | 750 | AT1G26730 [Arabidopsis thalian | 0.645 | 0.685 | 0.403 | 2.9e-114 | |
| TAIR|locus:2138038 | 745 | SHB1 "AT4G25350" [Arabidopsis | 0.638 | 0.681 | 0.395 | 7.1e-111 | |
| TAIR|locus:2007156 | 777 | AT1G69480 "AT1G69480" [Arabido | 0.640 | 0.656 | 0.374 | 1.5e-110 |
| TAIR|locus:2012458 PHO1;H1 "AT1G68740" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2766 (978.7 bits), Expect = 5.8e-288, P = 5.8e-288
Identities = 554/804 (68%), Positives = 621/804 (77%)
Query: 1 MVKFSKQFEGQLVPEWKEAFVDYWQXXXXXXXXXXXXXXXXXXXXXXXXXXQKHL--SFA 58
MVKF+KQFEGQLVPEWK+AFVDY Q +KH S
Sbjct: 1 MVKFTKQFEGQLVPEWKDAFVDYSQLKKDLKKIHLFTNGVE----------KKHTETSLI 50
Query: 59 STFISSLGKKFSSFGQHQHREHHGAIQVHKKLASSASKGDMYETELLEQFAD-TDATKEF 117
T SSLG+ S FG ++ RE IQVHKKLASS S D+YETELLE+ AD TDA KEF
Sbjct: 51 KTVKSSLGR-LSIFG-NKGREQSRVIQVHKKLASSGSNNDVYETELLEKIADDTDAAKEF 108
Query: 118 FECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALKKKRGKGASSQDSKXXX 177
F CLDMQLNKVNQFYK KEKEFL+RGE LKKQM+ILIELK A K+K+ G S+Q+SK
Sbjct: 109 FACLDMQLNKVNQFYKTKEKEFLERGECLKKQMDILIELKDAFKQKQANGESTQESKEDD 168
Query: 178 XXXXXXX-XXXXXXXRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLS 236
RTE+ QL+ + D E N +S S+E ++ DSKL+
Sbjct: 169 SISCTISCEYDSVRGRTEEMQLQVSCLDNLEDNGEEALESLGSEE---PIKANNEDSKLT 225
Query: 237 TLSGGVYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKI--PEGSNRLHINKT 294
T+S V++CQGKN++IKIPLT PSRT SA+SYLI NQSS K P+G N+L I+K
Sbjct: 226 TVSSRVFSCQGKNVKIKIPLTNPSRTFSAISYLI-----NQSSSKKNGPDGGNKLQISKK 280
Query: 295 KLHHAEKMIRGALIELYKGLGYLKTYRNLNMLAFIKILKKFDKVTGKQVLPIYLKVVESS 354
KL HAEKMI+GAL EL+KGL YLKTYRNLN+LAF+ ILKKFDKVTGKQ+LPIYLKVVESS
Sbjct: 281 KLSHAEKMIKGALTELFKGLNYLKTYRNLNILAFMNILKKFDKVTGKQILPIYLKVVESS 340
Query: 355 YFNSSDKVMNLADEVEELFIKHFADENRRKAMKYLKIHQRKESHGVTFFIGLFTGCFIAL 414
YFN SDKVM L+DEVEE FIKH A ENRRKAMKYLK H RKESH VTFFIGLFTGCF+AL
Sbjct: 341 YFNISDKVMILSDEVEEWFIKHLAGENRRKAMKYLKPHHRKESHSVTFFIGLFTGCFVAL 400
Query: 415 LAGYVIMAHITGMYRPRP-DTVYMETVYPVXXXXXXXXXXXXXYGCNIFMWKKARINYSF 473
LAGY+I+AH+TGMYR +T YMET YPV YGCNIFMW+KARINYSF
Sbjct: 401 LAGYIIVAHLTGMYRQHSANTFYMETAYPVLSMFGLLFLHLFLYGCNIFMWRKARINYSF 460
Query: 474 IFELAPTKELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYSYSQVQAIPGXXXXXXXXX 533
IFEL ELK+RDVFLICT SM+A+ GVMFVHLSL+ KGYS+ QVQ IPG
Sbjct: 461 IFELGSKNELKYRDVFLICTASMSAIAGVMFVHLSLLEKGYSFRQVQVIPGLLLLGFLLI 520
Query: 534 XVCPFNIFYRSSRYCFLRVIRNIILSPLYKVLMLDFFMADQLCSQVPLLRNLEFVACYYI 593
+CP NIFY+SSRY + VIRNI+ SPLYKV+MLDFFMADQLCSQVP+LRNLE++ACYYI
Sbjct: 521 LICPLNIFYKSSRYRLISVIRNIVFSPLYKVVMLDFFMADQLCSQVPMLRNLEYIACYYI 580
Query: 594 TGSFKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSHLINLGKYVSAM 653
TGS+ TQDY YCMR K+YRDLAYAVSFLPYYWRAMQCARRWFDEG+TSHL+NLGKYVSAM
Sbjct: 581 TGSYATQDYEYCMRVKYYRDLAYAVSFLPYYWRAMQCARRWFDEGETSHLVNLGKYVSAM 640
Query: 654 LAAGAKVVYEKERSVGWLCLVVVVSSGATVYQLYWDFVKDWGLLQVNSKNPWLRNELMLR 713
LAAG KV YEKERS+GWLCLVV +SS AT+YQLYWDFVKDWGLLQ NS NPWLRN+LMLR
Sbjct: 641 LAAGTKVAYEKERSLGWLCLVVAMSSVATIYQLYWDFVKDWGLLQHNSNNPWLRNQLMLR 700
Query: 714 RKCIYYFSMGLNLVLRLAWFQTVLHSNFEHVDYRVTGLFLAALEVIRRGIWNFYRLENEH 773
+K IYYFSM LNLVLRLAW QTVLHS+FEHVDYRVTGLFLAALEVIRRG WNFYRLENEH
Sbjct: 701 QKSIYYFSMVLNLVLRLAWLQTVLHSSFEHVDYRVTGLFLAALEVIRRGQWNFYRLENEH 760
Query: 774 LNNAGKFRAVKTVPLPF-EIDEED 796
LNNAGKFRAVKTVPLPF E+DEED
Sbjct: 761 LNNAGKFRAVKTVPLPFREVDEED 784
|
|
| TAIR|locus:2090930 PHO1 "phosphate 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6K991 PHO1-2 "Phosphate transporter PHO1-2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2092783 AT3G29060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014779 AT1G14040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2206742 AT1G35350 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2056941 AT2G03240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2200575 AT1G26730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138038 SHB1 "AT4G25350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007156 AT1G69480 "AT1G69480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00030246001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (790 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 796 | |||
| pfam03124 | 337 | pfam03124, EXS, EXS family | 1e-118 | |
| COG5409 | 384 | COG5409, COG5409, EXS domain-containing protein [S | 1e-38 | |
| pfam03105 | 176 | pfam03105, SPX, SPX domain | 1e-18 | |
| pfam03105 | 176 | pfam03105, SPX, SPX domain | 1e-13 | |
| COG5408 | 296 | COG5408, COG5408, SPX domain-containing protein [S | 3e-05 | |
| cd07605 | 223 | cd07605, I-BAR_IMD, Inverse (I)-BAR, also known as | 0.004 |
| >gnl|CDD|217378 pfam03124, EXS, EXS family | Back alignment and domain information |
|---|
Score = 360 bits (925), Expect = e-118
Identities = 135/341 (39%), Positives = 191/341 (56%), Gaps = 8/341 (2%)
Query: 439 TVYPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELAPTKELKHRDVFLICTTSMTA 498
T++P+ F LL L L+L+G N+++WK++ INY FIFE P L HR++ + +
Sbjct: 1 TLFPLYRGFFLLILGLWLWGLNLYVWKRSGINYVFIFEFDPRTSLSHRELLELASFFTVL 60
Query: 499 VVGVMFVHLSLITKG-YSYSQVQAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNII 557
+ ++L L + +P +LLLI LL+L PFNIFYRS R+ LR + I+
Sbjct: 61 WLLSFLLYLLLEHLELTKPASWVQVPLVLLLIVLLILFLPFNIFYRSGRFWLLRTLFRIL 120
Query: 558 LSPLYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGSFKTQDYGYCMRAKHYRDLAYA 617
L+P Y V DFF+ADQL S V +L +LE+ CYY C +K Y
Sbjct: 121 LAPFYPVKFRDFFLADQLTSLVKVLADLEYTVCYYFNNGDS--SDNTCGSSKVYVL--PI 176
Query: 618 VSFLPYYWRAMQCARRWFDEGQ-TSHLINLGKYVSAMLAAGAKVVYEKERSVG-WLCLVV 675
V+ LPY+ R +QC RR+ D G HL N KY +A+ +Y K + + L +
Sbjct: 177 VACLPYWIRFLQCLRRYRDTGDAFPHLANALKYSTAIPVVVLSTLYRKYNTSDAYRILWI 236
Query: 676 VVSSGATVYQLYWDFVKDWGLLQVN-SKNPWLRNELMLRRKCIYYFSMGLNLVLRLAWFQ 734
V S ++Y YWD DWGL Q N SKN +LR++L+ RK +YYF++ L+L+LR AW
Sbjct: 237 VFSIINSIYSFYWDVKMDWGLFQKNSSKNRFLRDKLLYPRKWVYYFAIVLDLILRFAWLL 296
Query: 735 TVLHSNFEHVDYRVTGLFLAALEVIRRGIWNFYRLENEHLN 775
TV + LA LE+IRR IWNF+R+ENEH+N
Sbjct: 297 TVSPLQHSIQHSELGVFLLALLEIIRRFIWNFFRVENEHVN 337
|
We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family includes C-terminus portions from the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be murine leukaemia virus (MLV) receptors (XPR1). N-terminus portions from these proteins are aligned in the SPX pfam03105 family. The previously noted similarity between SYG1 and MLV receptors over their whole sequences is thus borne out in pfam03105 and this family. While the N-termini aligned in pfam03105 are thought to be involved in signal transduction, the role of the C-terminus sequences aligned in this family is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) yeast proteins. ERD1 proteins are involved in the localisation of endogenous endoplasmic reticulum (ER) proteins. erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localisation label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles. Length = 337 |
| >gnl|CDD|227696 COG5409, COG5409, EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|217372 pfam03105, SPX, SPX domain | Back alignment and domain information |
|---|
| >gnl|CDD|217372 pfam03105, SPX, SPX domain | Back alignment and domain information |
|---|
| >gnl|CDD|227695 COG5408, COG5408, SPX domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|153289 cd07605, I-BAR_IMD, Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), a dimerization module that binds and bends membranes | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 796 | |||
| KOG1162 | 617 | consensus Predicted small molecule transporter [In | 100.0 | |
| PF03124 | 345 | EXS: EXS family; InterPro: IPR004342 The EXS domai | 100.0 | |
| COG5409 | 384 | EXS domain-containing protein [Signal transduction | 100.0 | |
| PF03105 | 275 | SPX: SPX domain; InterPro: IPR004331 The SPX domai | 100.0 | |
| KOG1161 | 310 | consensus Protein involved in vacuolar polyphospha | 99.96 | |
| COG5036 | 509 | SPX domain-containing protein involved in vacuolar | 99.87 | |
| COG5408 | 296 | SPX domain-containing protein [Signal transduction | 99.76 |
| >KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-145 Score=1237.59 Aligned_cols=609 Identities=44% Similarity=0.745 Sum_probs=544.9
Q ss_pred cchhhhhhhcCchhhHHhhcChhhHHHHHHHhhhhccccCCCCCCCcccccccccccccccccccccccCCCCCCCCCCc
Q 003778 2 VKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKFSSFGQHQHREHH 81 (796)
Q Consensus 2 mkFgk~l~~q~~peW~~~Yi~Y~~LKk~lk~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (796)
|||||+|++||+|||+++||||+.|||+||+|+..+. +
T Consensus 1 MKFgk~~~~q~~pEW~~ay~dY~~lK~~l~~i~~~~~-----------------------------------~------- 38 (617)
T KOG1162|consen 1 MKFGKELESQLVPEWRQAYIDYKYLKKLLKEIIENKP-----------------------------------S------- 38 (617)
T ss_pred CcchHHHHHhcCHHHHHHhhhHHHHHHHHHHHHhcCC-----------------------------------C-------
Confidence 9999999999999999999999999999999997522 0
Q ss_pred cceeeeccccccCCCCCcchhhhhccc-CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003778 82 GAIQVHKKLASSASKGDMYETELLEQF-ADTDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTAL 160 (796)
Q Consensus 82 ~~i~v~~~~~~~g~~~~~y~t~~~~~~-~~~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~ 160 (796)
+ ++|++++.. .+++.|.+||+.||+||+|||+||++|++|+.+|.+.|++||+++++.|.+
T Consensus 39 ---------------~--~~t~~~~~~~~~~~~~~~Ff~~ld~el~Kvn~Fy~~k~~e~~~~~~~L~~ql~~~~~~r~~- 100 (617)
T KOG1162|consen 39 ---------------S--EETTFLMVSEEGGEFEEVFFRRLDEELNKVNKFYKEKVKEAREEAEELNKQLDALIALRVK- 100 (617)
T ss_pred ---------------c--CccHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 0 135555554 677999999999999999999999999999999999999999999999853
Q ss_pred hhhhcCCCCCCCCCCccccccccccccccchhhhhhhhcCCCCCCCCCCCCCCCCCCCccccccccccccccccccccCC
Q 003778 161 KKKRGKGASSQDSKEDESISCTISCEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLSG 240 (796)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (796)
.+ ++.+. . . +
T Consensus 101 -----~~----~~~~~-------------------------------------~-----------~---~---------- 110 (617)
T KOG1162|consen 101 -----SR----SSVDI-------------------------------------S-----------D---R---------- 110 (617)
T ss_pred -----cc----ccccc-------------------------------------c-----------c---c----------
Confidence 00 00000 0 0 0
Q ss_pred CcccccCccccccCCCCCCccccchhhhhhhhhhhccCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHhHHhH
Q 003778 241 GVYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKIPEGSNRLHINKTKLHHAEKMIRGALIELYKGLGYLKTY 320 (796)
Q Consensus 241 ~~~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lk~a~~E~Y~~L~lLksY 320 (796)
+ ++ ....++|+ ++++|++||.||+|||++|.+||+|
T Consensus 111 -~---------------------~~---------------------~~~~f~~~-~~~~e~~lk~af~Efy~~L~llk~y 146 (617)
T KOG1162|consen 111 -A---------------------AR---------------------LRGKFTKV-LRKAEEKLKLAFSEFYLKLRLLKNY 146 (617)
T ss_pred -c---------------------ch---------------------hhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00114555 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCChHHHHHhccccCCCChhHHHHHHHHHHHHHHHHhccccHHHHHHHhccccccCCcch
Q 003778 321 RNLNMLAFIKILKKFDKVTGKQVLPIYLKVVESSYFNSSDKVMNLADEVEELFIKHFADENRRKAMKYLKIHQRKESHGV 400 (796)
Q Consensus 321 ~~LN~taF~KIlKKyDK~~~~~~~~~ym~~v~~s~F~~~d~l~~li~~vE~ly~~~F~~gnrkkA~~~LR~~~~~~~~~~ 400 (796)
++||.|||+||+|||||+++++. ..|+++|+.++|.++|++++|+.+||++|+++|++|||++||+.||++ .++.|..
T Consensus 147 ~~lN~~~f~KI~KKyDK~~~~~~-~~~~~~v~~s~f~~~~~i~~l~~~Ve~~f~~~fan~nr~~~m~~lr~~-~~e~h~~ 224 (617)
T KOG1162|consen 147 QFLNVTAFRKILKKYDKITSRDA-KRYVKMVDKSYFTSSDEITRLMLEVEETFTKHFANGNRRKAMKVLRPK-LKEKHRP 224 (617)
T ss_pred HHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhCCChhHhhhhcCCc-ccccCCC
Confidence 99999999999999999999999 899999999999999999999999999999999999999999999999 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCeeEEeeeCCC
Q 003778 401 TFFIGLFTGCFIALLAGYVIMAHITGMYRPRPDTVYMETVYPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELAPT 480 (796)
Q Consensus 401 ~F~~Glf~G~~~~L~~~~~i~~~~~~~~~~~~~~~y~~~~~p~~~~f~L~~L~~~l~g~n~~iW~~~~INY~fIFe~~~~ 480 (796)
+|++|+++||++.+.+++.+++++.+++.+. +..|+++++|+++ |+++++|++|||+|||+|+++||||+||||++++
T Consensus 225 ~~~~~f~~g~~~~l~val~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~v~l~~fl~~~niy~W~~~rVNy~fIf~~~~~ 302 (617)
T KOG1162|consen 225 TFSTGFFVGCGIGLSVALVALIYLRNILQSE-QRFYMETMFPLYG-FGLVVLHKFLYNVNIYEWSRTRVNYKFIFEFDQR 302 (617)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHH-HHHHHHHHHHhcCchHHHHHhcCCceeeecCCcc
Confidence 9999999999999999998889998888775 8899999999998 9999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhHHHHHHHHHHHHhcccccchhhhHHHHHHHHHhhcCC
Q 003778 481 KELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYSYSQVQAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNIILSP 560 (796)
Q Consensus 481 ~~l~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~P~il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril~ap 560 (796)
+++++++++++++++..+.+.+++.++.....+.. ++++|++++++++++|+||++++|+++|+|+++++.||+++|
T Consensus 303 ~~l~~~~~l~i~~~~~~~~~l~~l~~l~~~~~~~~---~~~~Pl~ll~~~~~~L~~Pf~~fY~sSRf~ll~~l~rvi~sp 379 (617)
T KOG1162|consen 303 TELGYRDILLIHNTNGILEFLPVLKNLDMSMSGQT---TELSPLILLLLFFFLLVCPFNTFYRSSRFWLLKRLFRVLSSP 379 (617)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhccccCCCC---cccchHHHHHHHHheeeccchhhhHhhHHHHHHHHHHHHhcc
Confidence 99999999999998887777777777665544442 678999999999999999999999999999999999999999
Q ss_pred cceeecchhhhhhhhcchHHhhhhhhhhhhheecCCccccCCCcccccccchhhhHHHHHhHHHHHHHHhHHHhhccCCc
Q 003778 561 LYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGSFKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQT 640 (796)
Q Consensus 561 f~~V~F~DFflaDqltSl~~~l~Dl~~~~C~y~~g~~~~~~~~~C~~~~~~~~l~~i~~~lP~~~R~~QClRRy~dt~~~ 640 (796)
+++|.|+|||+|||+||++++++|+++++|+|.+|.|.... +|..+..+..+.++++++|+|||++||+|||.|++.+
T Consensus 380 l~~V~~~DFfl~Dql~S~v~a~~~l~~~~C~y~~~~~~~~~--~~~~~~~~~~~~~iva~lP~~~RfLQClRR~~d~~~~ 457 (617)
T KOG1162|consen 380 LYKVLFVDFFLADQLTSLVLALRDLEFFICYYGTGDFQARR--TCYCKDDYIEFQSIVAVLPYWFRFLQCLRRYRDEKAF 457 (617)
T ss_pred ceeeccccccHHHHHHHHHHHHHhHHHhheeeccccccccc--ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999999999999999999998765433 6666666778899999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhccCCc-chhhHHHHHhhhhhhhhhhhhhhhhccCcccCCCCcCccccccccccceee
Q 003778 641 SHLINLGKYVSAMLAAGAKVVYEKERSV-GWLCLVVVVSSGATVYQLYWDFVKDWGLLQVNSKNPWLRNELMLRRKCIYY 719 (796)
Q Consensus 641 ~hL~Na~KY~ssi~~~~~~~~y~~~~~~-~w~~~~ii~s~insiYs~~WDv~mDWgLl~~~sk~~~LR~~L~~~~k~~YY 719 (796)
+||+||+||+++++++++...|+..++. .|+++|++++++||+|+++||++|||||++++++ ||||++++||+||+||
T Consensus 458 ~hL~NAlKY~~~i~~v~~~~~y~~~~~~~~~~~l~~~~s~vaS~y~~~WDvv~DWgLl~~~~~-~~lRd~l~~p~k~vYy 536 (617)
T KOG1162|consen 458 PHLLNALKYSTTILAVMLTTLYRILPGSSLWFALWILSSKVASLYTTYWDVVMDWGLLNRKSK-PWLRDNLLYPQKWVYY 536 (617)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHheecccccccCc-hhhHHHhcccchheeh
Confidence 9999999999999999999999988775 9999999999999999999999999999999999 9999999999999999
Q ss_pred hhhhhhhHHHHHHHHHhh-cccccccchhhHHHHHHHHHHHhhhceeeeeehhhhhhccCCceeccccCCCCcCCCC
Q 003778 720 FSMGLNLVLRLAWFQTVL-HSNFEHVDYRVTGLFLAALEVIRRGIWNFYRLENEHLNNAGKFRAVKTVPLPFEIDEE 795 (796)
Q Consensus 720 ~Aiv~n~iLRf~W~~~~~-~~~~~~~~~~~~~f~~a~lEI~RR~iWnffRvEnEHl~N~~~fRa~rdvpLP~~~~~~ 795 (796)
+||+.|++|||+|++.++ ..+..+. +..+++++|++||+|||+||||||||||+||||+|||+++||+|++.++|
T Consensus 537 ~aiv~N~vLR~aW~~~~i~~~~~~~~-~~~~~~i~a~LEIiRRfiWnfFRLEnEhlnN~g~fRa~~~v~l~~~~~~~ 612 (617)
T KOG1162|consen 537 SAIVLNFVLRFAWFFKTILVFHEEFL-SDSMVFIMALLEIIRRFIWNFFRLENEHLNNVGKFRAFRDVPLPFSYMDE 612 (617)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhccccccCCchhhhccc
Confidence 999999999999966643 3332222 78899999999999999999999999999999999999999999955443
|
|
| >PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1 | Back alignment and domain information |
|---|
| >COG5409 EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF03105 SPX: SPX domain; InterPro: IPR004331 The SPX domain is named after SYG1/Pho81/XPR1 proteins | Back alignment and domain information |
|---|
| >KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG5408 SPX domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 796 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-09
Identities = 115/750 (15%), Positives = 219/750 (29%), Gaps = 272/750 (36%)
Query: 10 GQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKF 69
++ +++AFV + + D + S ++ H+ + +S + F
Sbjct: 19 KDILSVFEDAFV------DNFDCKDVQDMPKS----ILSKEEIDHIIMSKDAVSGTLRLF 68
Query: 70 SSFGQHQHREHHGAIQVHKKLASSASKGDMYETELLEQFAD-----TDATKEFFECLDMQ 124
+ Q ++ +K + + Y+ L+ + T+ + E D +
Sbjct: 69 WTLLSKQE-------EMVQKFVEEVLRIN-YKF-LMSPIKTEQRQPSMMTRMYIEQRD-R 118
Query: 125 LNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALKKKRGKGASSQDSKEDESISCTIS 184
L NQ + K + R + K L+ AL +
Sbjct: 119 LYNDNQVFA---KYNVSRLQPYLK-------LRQALLE---------------------- 146
Query: 185 CEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEM---GKS------MRMKRVDSKL 235
P N + + GK+ +V K+
Sbjct: 147 -------------------LRPAKNVLIDG-------VLGSGKTWVALDVCLSYKVQCKM 180
Query: 236 STLSGGVY-----NCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQS--SKKIPEGSNR 288
++ NC +++ + + Y I + ++S S I R
Sbjct: 181 D---FKIFWLNLKNCNSPETVLEM--------LQKLLYQIDPNWTSRSDHSSNIKL---R 226
Query: 289 LHINKTKLHH--AEKMIRGALIELYKGLGYLKTYRNLNMLAFIKILKKFD---KV---TG 340
+H + +L K L+ L N+ K F+ K+ T
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVL----------LNVQNA---KAWNAFNLSCKILLTTR 273
Query: 341 KQVLPIYLKVVESSYFNSSDKVMNLA-DEVEELFIKHFADENRRKAMKYLKIHQRKESHG 399
+ + +L +++ + M L DEV+ L + KYL +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL------------KYLDCRPQDLPRE 321
Query: 400 VTFFIGLFTGCFIALLAGYVIMAHITGMYRPRPDT------VYMETVYPVLSMFSLLFL- 452
V ++ I R T V + + ++ SL L
Sbjct: 322 V---------LTTNPRR----LSIIAESIRDGLATWDNWKHVNCDKLTTIIES-SLNVLE 367
Query: 453 -----HLFLYGCNIFMWKKARINYSFIFELAPTK-------ELKHRDVFLICTTSMTAVV 500
+F ++F A I PT ++ DV ++
Sbjct: 368 PAEYRKMFDR-LSVFP-PSAHI---------PTILLSLIWFDVIKSDVMVVVNK------ 410
Query: 501 GVMFVHLSLITKGYSYSQVQAIPGLLLLIFLLL---------LVCPFNIF--YRSS---- 545
SL+ K S + IP + L + + L +V +NI + S
Sbjct: 411 ---LHKYSLVEKQPKESTIS-IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466
Query: 546 ----RYCF------LRVIRNIILSPLYKVLMLDF-FMADQLC----------SQVPLLRN 584
+Y + L+ I + L++++ LDF F+ ++ S + L+
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
Query: 585 LEFVACY--YITGSFKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSH 642
L+F Y YI D Y D FLP + +
Sbjct: 527 LKF---YKPYIC----DNDPKYERLVNAILD------FLP------KIE---------EN 558
Query: 643 LINLGKYVS----AMLAAGAKVVYEKERSV 668
LI KY A++A + E + V
Sbjct: 559 LIC-SKYTDLLRIALMAEDEAIFEEAHKQV 587
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00