Citrus Sinensis ID: 003781
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 796 | 2.2.26 [Sep-21-2011] | |||||||
| O23826 | 1006 | 125 kDa kinesin-related p | N/A | no | 0.924 | 0.731 | 0.506 | 0.0 | |
| P82266 | 1009 | Probable 125 kDa kinesin- | no | no | 0.933 | 0.736 | 0.480 | 0.0 | |
| P28025 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.541 | 0.403 | 0.460 | 1e-102 | |
| B2GU58 | 1067 | Kinesin-like protein KIF1 | yes | no | 0.541 | 0.403 | 0.458 | 1e-101 | |
| Q91783 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.541 | 0.403 | 0.460 | 1e-101 | |
| P46863 | 1066 | Bipolar kinesin KRP-130 O | yes | no | 0.528 | 0.394 | 0.458 | 9e-99 | |
| Q6P9P6 | 1052 | Kinesin-like protein KIF1 | yes | no | 0.478 | 0.362 | 0.486 | 2e-97 | |
| P52732 | 1056 | Kinesin-like protein KIF1 | yes | no | 0.496 | 0.374 | 0.475 | 5e-97 | |
| P17120 | 1184 | Kinesin-like protein bimC | yes | no | 0.719 | 0.483 | 0.353 | 3e-85 | |
| Q8J1G4 | 1129 | Kinesin-like protein KIP1 | yes | no | 0.791 | 0.558 | 0.324 | 8e-79 |
| >sp|O23826|K125_TOBAC 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1 | Back alignment and function desciption |
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Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/758 (50%), Positives = 536/758 (70%), Gaps = 22/758 (2%)
Query: 1 MEGGARK----KNGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLA 56
MEG ++ NGE P +AGVIPRAVKQ+FD LE+Q+AEYS+KVTFLELYNEEI+DLLA
Sbjct: 105 MEGECKRSKSGPNGELPQEAGVIPRAVKQVFDTLESQNAEYSVKVTFLELYNEEITDLLA 164
Query: 57 LEETSKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLL 116
E+ ++D+ KK + LMEDGKGGV VRGLEEEIVT+A+EI+ +LE+GSAKRRTAETLL
Sbjct: 165 PEDLKVALEDRQKKQLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSAKRRTAETLL 224
Query: 117 NKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEI 176
NKQSSRSHS+FSITIHIKE TPEGEE+IKCGKLNLVDLAGSENISRSGAREGRAREAGEI
Sbjct: 225 NKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEI 284
Query: 177 NKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236
NKSLLTLGRVINALVEH GH+PYRDSKLTRLLRDSLGG+TKTCIIATVSP++HCLEETLS
Sbjct: 285 NKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLS 344
Query: 237 TLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQE 296
TLDYAHRAKNIKNKPE+NQKMMKS +IKDLY EI+RLK EVYAAREKNG+YIP++RY QE
Sbjct: 345 TLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKAEVYAAREKNGVYIPKERYYQE 404
Query: 297 EAEKKAMAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHAL 356
E E+KAMA++IE+M + E+ KQ ELQ ++SQ+ ++L+ KL+ T+K+L +T L
Sbjct: 405 ENERKAMADQIEQMGVSIENHQKQFEELQSRHDSQVQQCSDLTCKLDVTQKQLNQTSKLL 464
Query: 357 SDLEEKHRQANATIKEKDFLIANLLKSEKALVERAIELRTELENAASDVSNLFAKIERKD 416
+ EE+ RQ+ T+KE+DF+I+ K+E AL +A LR +LE + + ++LF KI R+D
Sbjct: 465 AYTEEQLRQSQYTLKERDFIISEQKKAENALAHQACVLRADLEKSIQENASLFQKIARED 524
Query: 417 KIEEGNRILIQMFQSQLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEEL 476
K+ NR L+ FQ++L +QL L T+ATSV +Q + L+ +E+ +F+ + +A +L
Sbjct: 525 KLSTDNRSLVNNFQAELAKQLGSLSSTLATSVCRQTEHLQCVEKFCHNFLDSHDKAVLDL 584
Query: 477 RGRLGKLKAMYGSGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADS 536
+ ++ A+Y S +A+ + S +T ++++ S +S + ++ A EA+S
Sbjct: 585 KRKINSSMALYISHFEAMQNVVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANS 644
Query: 537 LLNDLQSSLYKQEEKLTAYAQQQREAHSRAVENARSVSKVTVNFF-------KTLDMHAS 589
+ ++LQS+L + ++ +A++ R+ + + E+ ++S + FF K L+ HA+
Sbjct: 645 MFDELQSTLSTHQGEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHAT 704
Query: 590 NLTKIVEEAQTVNDQKLFEFEKKFEESAANEERQLLEKVAELLASSNARKKQLVQMAVQD 649
V+E QT + EFEK +EE + ++ +L+ V L+++ R+K+LV + D
Sbjct: 705 T----VDEIQT---NSIAEFEKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVD 757
Query: 650 LRESASSRTSQLQKEMSTMQDSTFSVKAEWSAHMNKTESHYLE--DTSAVENGKKDLEVV 707
LRE+ S + L +S+M+ T K +W + E E D SA ++ + +E +
Sbjct: 758 LRETVSGNRTFLDGHVSSMEGITTDAKRKWQDFYMQAEGETKENADFSAAKHCR--MESL 815
Query: 708 LQNCLKQAKMGAQQWRTAQESLLNLEKNNVAAVDSIVR 745
+Q C+ A+ ++W++ E + ++ +V + S+VR
Sbjct: 816 MQKCVSTAETALKRWQSTHELVNDMGNQHVLTMHSVVR 853
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Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules. Nicotiana tabacum (taxid: 4097) |
| >sp|P82266|K125_ARATH Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=2 | Back alignment and function description |
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| >sp|P28025|KI11B_XENLA Kinesin-like protein KIF11-B OS=Xenopus laevis GN=kif11-b PE=1 SV=2 | Back alignment and function description |
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| >sp|B2GU58|KIF11_XENTR Kinesin-like protein KIF11 OS=Xenopus tropicalis GN=kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q91783|KI11A_XENLA Kinesin-like protein KIF11-A OS=Xenopus laevis GN=kif11-a PE=1 SV=1 | Back alignment and function description |
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| >sp|P46863|KL61_DROME Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2 | Back alignment and function description |
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| >sp|P17120|BIMC_EMENI Kinesin-like protein bimC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimC PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8J1G4|KIP1_ASHGO Kinesin-like protein KIP1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=KIP1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 796 | ||||||
| 255584146 | 1053 | Bipolar kinesin KRP-130, putative [Ricin | 0.934 | 0.706 | 0.896 | 0.0 | |
| 359479018 | 1044 | PREDICTED: 125 kDa kinesin-related prote | 0.935 | 0.713 | 0.885 | 0.0 | |
| 297746163 | 1050 | unnamed protein product [Vitis vinifera] | 0.935 | 0.709 | 0.885 | 0.0 | |
| 449505890 | 1051 | PREDICTED: 125 kDa kinesin-related prote | 0.935 | 0.708 | 0.853 | 0.0 | |
| 449470382 | 1051 | PREDICTED: 125 kDa kinesin-related prote | 0.935 | 0.708 | 0.853 | 0.0 | |
| 356558395 | 1051 | PREDICTED: 125 kDa kinesin-related prote | 0.935 | 0.708 | 0.863 | 0.0 | |
| 224106553 | 1066 | predicted protein [Populus trichocarpa] | 0.935 | 0.698 | 0.856 | 0.0 | |
| 224059540 | 1077 | predicted protein [Populus trichocarpa] | 0.934 | 0.690 | 0.836 | 0.0 | |
| 356550225 | 1051 | PREDICTED: 125 kDa kinesin-related prote | 0.935 | 0.708 | 0.855 | 0.0 | |
| 15231259 | 1058 | P-loop containing nucleoside triphosphat | 0.935 | 0.704 | 0.851 | 0.0 |
| >gi|255584146|ref|XP_002532813.1| Bipolar kinesin KRP-130, putative [Ricinus communis] gi|223527433|gb|EEF29570.1| Bipolar kinesin KRP-130, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/744 (89%), Positives = 712/744 (95%)
Query: 1 MEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEET 60
MEGG R+KNGEFPSDAGVIPRAVKQIFDILEAQ+AEYSMKVTFLELYNEEI+DLLALEET
Sbjct: 147 MEGGGRRKNGEFPSDAGVIPRAVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLALEET 206
Query: 61 SKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQS 120
KFVDDKSKKPIALMEDGKGGVFVRGLEEEIV TA+EIYKILEKGSAKRRTAETLLNKQS
Sbjct: 207 PKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQS 266
Query: 121 SRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSL 180
SRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSL
Sbjct: 267 SRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSL 326
Query: 181 LTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDY 240
LTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIAT+SPSIHCLEETLSTLDY
Sbjct: 327 LTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDY 386
Query: 241 AHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQEEAEK 300
AHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQ+EAEK
Sbjct: 387 AHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQDEAEK 446
Query: 301 KAMAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALSDLE 360
KAMAEKIERMEL+SESKDKQLMELQ+LYNSQLLLTAELSEKLEKTEKKLEETE++L DLE
Sbjct: 447 KAMAEKIERMELDSESKDKQLMELQDLYNSQLLLTAELSEKLEKTEKKLEETENSLFDLE 506
Query: 361 EKHRQANATIKEKDFLIANLLKSEKALVERAIELRTELENAASDVSNLFAKIERKDKIEE 420
EKHRQANATIKEK+FLI+NLLKSEKALVERA ELR ELENAASD+S+LFAKIERKDKIE+
Sbjct: 507 EKHRQANATIKEKEFLISNLLKSEKALVERAFELRAELENAASDISSLFAKIERKDKIED 566
Query: 421 GNRILIQMFQSQLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEELRGRL 480
GNR+LIQ FQS LTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEELRGR+
Sbjct: 567 GNRVLIQNFQSHLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEELRGRV 626
Query: 481 GKLKAMYGSGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLND 540
GKLK MYGSGI+ALD +A EL+GNSRSTF +LN EVSKHSHALE LF+GIASEAD+LLND
Sbjct: 627 GKLKTMYGSGIQALDAMAKELEGNSRSTFNNLNFEVSKHSHALEGLFQGIASEADALLND 686
Query: 541 LQSSLYKQEEKLTAYAQQQREAHSRAVENARSVSKVTVNFFKTLDMHASNLTKIVEEAQT 600
LQ SL+ QEEKLTAYA+QQREAHSRAVE+ARSVSK+TVNFFKTLDMHAS LT+IVEEAQT
Sbjct: 687 LQGSLHMQEEKLTAYARQQREAHSRAVESARSVSKITVNFFKTLDMHASKLTQIVEEAQT 746
Query: 601 VNDQKLFEFEKKFEESAANEERQLLEKVAELLASSNARKKQLVQMAVQDLRESASSRTSQ 660
VNDQKL E EKKFEE AANEERQLL KVAELLASSNARKK+LVQ+AVQDLRESA+SRTS+
Sbjct: 747 VNDQKLSELEKKFEECAANEERQLLAKVAELLASSNARKKKLVQLAVQDLRESANSRTSK 806
Query: 661 LQKEMSTMQDSTFSVKAEWSAHMNKTESHYLEDTSAVENGKKDLEVVLQNCLKQAKMGAQ 720
+Q+EMSTMQDS+ S+KAEW+ HM KTE +YLEDT+AVE KKD+E VL NCL +AKMGAQ
Sbjct: 807 IQQEMSTMQDSSSSIKAEWTVHMEKTEINYLEDTNAVEYRKKDMEDVLHNCLNKAKMGAQ 866
Query: 721 QWRTAQESLLNLEKNNVAAVDSIV 744
QW+ AQESLLNLEK+NV +V+SIV
Sbjct: 867 QWKNAQESLLNLEKSNVDSVNSIV 890
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359479018|ref|XP_002284615.2| PREDICTED: 125 kDa kinesin-related protein [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297746163|emb|CBI16219.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449505890|ref|XP_004162596.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449470382|ref|XP_004152896.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356558395|ref|XP_003547492.1| PREDICTED: 125 kDa kinesin-related protein-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224106553|ref|XP_002314206.1| predicted protein [Populus trichocarpa] gi|222850614|gb|EEE88161.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224059540|ref|XP_002299897.1| predicted protein [Populus trichocarpa] gi|222847155|gb|EEE84702.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356550225|ref|XP_003543488.1| PREDICTED: 125 kDa kinesin-related protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|15231259|ref|NP_190171.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|334185753|ref|NP_001190017.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|7339486|emb|CAB82809.1| kinesin-related protein-like [Arabidopsis thaliana] gi|332644559|gb|AEE78080.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|332644560|gb|AEE78081.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00024429001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (1050 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00035100001 | • | • | 0.414 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 796 | |||
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 1e-148 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-105 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-100 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 2e-90 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 1e-77 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 3e-77 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 3e-76 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 6e-76 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 2e-72 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 2e-70 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 9e-69 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 2e-65 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 3e-63 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 2e-60 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 1e-54 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 1e-53 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 3e-51 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 8e-49 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 6e-48 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-05 | |
| pfam05622 | 713 | pfam05622, HOOK, HOOK protein | 6e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.001 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.003 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.004 |
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
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Score = 437 bits (1126), Expect = e-148
Identities = 171/261 (65%), Positives = 203/261 (77%), Gaps = 12/261 (4%)
Query: 1 MEGG---ARKKNGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLAL 57
MEG + E AG+IPRA+ Q+F+ LE+Q+ EYS+KV++LELYNEE+ DLL+
Sbjct: 99 MEGDRTDNKGSTWELSPHAGIIPRALYQLFEKLESQNTEYSVKVSYLELYNEELFDLLSS 158
Query: 58 EETSKFVDDKSKKPIALMED--GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETL 115
E KP+ + +D KGGV ++GLEE V A+E K+LEKGSAKR+TA TL
Sbjct: 159 E-------SDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTAATL 211
Query: 116 LNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGE 175
+N QSSRSHSIFSITIHIKE T GEE++K GKLNLVDLAGSENI RSGA RAREAG
Sbjct: 212 MNDQSSRSHSIFSITIHIKETTISGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGN 271
Query: 176 INKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETL 235
IN+SLLTLGRVINALVE S H+PYR+SKLTRLL+DSLGG+TKT IIAT+SP+ LEETL
Sbjct: 272 INQSLLTLGRVINALVEKSPHIPYRESKLTRLLQDSLGGRTKTSIIATISPASINLEETL 331
Query: 236 STLDYAHRAKNIKNKPEINQK 256
STL+YAHRAKNIKNKPE+NQK
Sbjct: 332 STLEYAHRAKNIKNKPEVNQK 352
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This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 352 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
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| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
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| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|218661 pfam05622, HOOK, HOOK protein | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 796 | |||
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 98.6 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.98 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 97.89 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 97.72 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 97.69 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 97.66 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.53 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 97.48 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.48 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 97.46 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 97.45 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 97.4 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 97.39 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 97.33 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 97.31 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 97.28 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.23 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 97.23 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.19 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.16 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 97.13 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 97.13 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.05 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.03 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.99 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.91 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.88 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 96.77 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 96.59 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 96.57 | |
| PF01442 | 202 | Apolipoprotein: Apolipoprotein A1/A4/E domain; Int | 96.53 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 96.26 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.05 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.0 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.87 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.84 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 95.83 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 95.79 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.75 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.63 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.61 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 95.59 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 95.58 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 95.24 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 95.01 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 94.83 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 94.7 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 94.26 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 94.19 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 94.06 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 93.87 | |
| PF12252 | 1439 | SidE: Dot/Icm substrate protein; InterPro: IPR0210 | 93.77 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 93.7 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 93.65 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 93.63 | |
| PRK09039 | 343 | hypothetical protein; Validated | 93.54 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 93.42 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 93.33 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.19 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 92.8 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 92.64 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 92.44 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 92.33 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 92.13 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 92.12 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 92.08 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 91.93 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 91.86 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 91.73 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 91.69 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 91.57 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 91.48 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 91.42 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 91.35 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 90.63 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 90.56 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 90.46 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 90.37 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.29 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 90.26 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 89.94 | |
| PF06705 | 247 | SF-assemblin: SF-assemblin/beta giardin | 89.25 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 89.24 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 88.76 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 88.68 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 88.32 | |
| PF01540 | 353 | Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR0 | 87.82 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 87.7 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 87.57 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 87.38 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 87.36 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 87.34 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 87.23 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 87.08 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 86.51 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 85.91 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 85.77 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 85.71 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 85.56 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 85.49 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 84.95 | |
| PF07464 | 155 | ApoLp-III: Apolipophorin-III precursor (apoLp-III) | 84.5 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 84.39 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 84.13 | |
| PF13949 | 296 | ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HI | 83.88 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 83.56 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 83.36 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 82.54 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 82.51 | |
| PRK09039 | 343 | hypothetical protein; Validated | 82.43 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 82.36 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 82.3 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 82.19 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 82.18 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 82.17 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 81.93 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 81.64 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 80.67 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 80.59 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 80.23 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 80.01 |
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-124 Score=1092.39 Aligned_cols=782 Identities=53% Similarity=0.754 Sum_probs=745.2
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCeEEEEEEEEEEEcCceeecCCCCCCC-cccccCCCCCeeEEecCC
Q 003781 1 MEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETS-KFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 1 MtG~~~t~~g~~~~~~GIIPRal~~LF~~le~~~~~~sV~vS~lEIYNE~V~DLL~~~~~~-~~~~~~~~~~l~i~ed~~ 79 (796)
|+|+.+..+|..|+++|||||++.+||+.++..+.+|+|+|||+|+|||+|+|||+|.... +.......+++. +++
T Consensus 146 MeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~~~~EYsvKVSfLELYNEEl~DLLa~~~~~~~~~~~k~~~~~~---~~k 222 (1041)
T KOG0243|consen 146 MEGGERKKNGELPSEAGIIPRALRQIFDTLEAQGAEYSVKVSFLELYNEELTDLLASEDTSDKKLRIKDDSTIV---DGK 222 (1041)
T ss_pred eecCcccccCCCCccCCcchHHHHHHHHHHHhcCCeEEEEEEehhhhhHHHHHhcCCccccccccccccCCccc---CCc
Confidence 6666666677899999999999999999999999999999999999999999999998753 222222222332 679
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
|||+|+||.+++|+++.|++.+|.+|..+|++|+|.||++|||||+||+|+|++++.++.|++++++||||||||||||+
T Consensus 223 ggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t~~geelvK~GKLNLVDLAGSEN 302 (1041)
T KOG0243|consen 223 GGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENTPEGEELVKIGKLNLVDLAGSEN 302 (1041)
T ss_pred CcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEecCCCcchhhHhhcccceeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
++++||.+.|++|||.||+||+||||||+||+++++|||||||||||||||||||++||||||||||+..+++||+|||+
T Consensus 303 I~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDSLGGkTKT~iIATiSPa~~~lEETlSTLE 382 (1041)
T KOG0243|consen 303 ISRSGARNGRAREAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDSLGGKTKTCIIATISPAKHNLEETLSTLE 382 (1041)
T ss_pred ccccccccchhHHhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhCCCceeEEEEEeCCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 240 YAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQEEAEKKAMAEKIERMELESESKDK 319 (796)
Q Consensus 240 fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~el~~~r~k~gv~~~~~~~~~~e~e~k~~~~~ie~le~~l~~~~~ 319 (796)
||.|||+|+|+|++|+.++++.++++|+.||++||.+|.++|+|||+|++.++|.+++.+++.+.++|++++.+++..++
T Consensus 383 YA~RAKnIkNKPevNQkl~K~~llKd~~~EIerLK~dl~AaReKnGvyisee~y~~~e~e~~~~~~~ieele~el~~~~~ 462 (1041)
T KOG0243|consen 383 YAHRAKNIKNKPEVNQKLMKKTLLKDLYEEIERLKRDLAAAREKNGVYISEERYTQEEKEKKEMAEQIEELEEELENLEK 462 (1041)
T ss_pred HHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhHhhCceEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 320 QLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALSDLEEKHRQANATIKEKDFLIANLLKSEKALVERAIELRTELE 399 (796)
Q Consensus 320 ~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~~l~e~~~~i~~l~~~e~~l~~~~~~l~~~l~ 399 (796)
++..+++.|..+......|.+++.+++.+|.+....+..+++++.+++..|++++++|+.+..+|..+..++..++..++
T Consensus 463 ~l~~~~e~~~~~~~~~~~l~~~~~~~k~~L~~~~~el~~~~ee~~~~~~~l~~~e~ii~~~~~se~~l~~~a~~l~~~~~ 542 (1041)
T KOG0243|consen 463 QLKDLTELYMNQLEIKELLKEEKEKLKSKLQNKNKELESLKEELQQAKATLKEEEEIISQQEKSEEKLVDRATKLRRSLE 542 (1041)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Q 003781 400 NAASDVSNLFAKIERKDKIEEGNRILIQMFQSQLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEELRGR 479 (796)
Q Consensus 400 ~~~~~v~~L~~kl~rk~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 479 (796)
.+..++.+|+.+++++.++...|+..+..|..++...+..+...+....+++..++..|...+.+|++.+....+.++..
T Consensus 543 ~s~~d~s~l~~kld~~~~~~d~n~~~~~~~~~~l~~~~~~~~~~v~~~~s~~~~~l~~~~~~~~s~~s~~~~~~e~~~t~ 622 (1041)
T KOG0243|consen 543 ESQDDLSSLFEKLDRKDRLDDDNQEVIDDFQSQLSENLSTLHGLVASSSSQQISQLTTMLAQMESFLSAKSKATEIMKTK 622 (1041)
T ss_pred HHHHHHHHHHHHhhhhhccccccHHHHHHHhhhhhHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHhhhhccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhhHHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 480 LGKLKAMYGSGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQ 559 (796)
Q Consensus 480 ~~~~k~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 559 (796)
+...++.++++++.++.+...++..+.+.++.+.+..-+|..+++.++.+....+..+++++.+.++.|++.+..|+.|+
T Consensus 623 ~~~~r~~~~~~~e~~q~~~~~~k~~~~s~l~~i~s~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~l~~q~~~~~l~~~qe 702 (1041)
T KOG0243|consen 623 ISKDRDILSEVLESLQQLQEVLKKDSESCLEVINSSITSSINELESMLETIANTADDLLQNISSRLSNQQEILSLFANQE 702 (1041)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHhHhhHHHHHHhHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 003781 560 REAHSRAVENARSVSKVTVNFFKTLDMHASNLTKIVEEAQTVNDQKLFEFEKKFEESAANEERQLLEKVAELLASSNARK 639 (796)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~q 639 (796)
+..+..+....+.++..+..||+++..++.++.......+......+++|++.|+. .+.+.++++++|+.++.++.+++
T Consensus 703 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~e~~~~~~q~~ 781 (1041)
T KOG0243|consen 703 LQELVLSQDSAQELSELTSTFFQTLDNQAEKLTNLFSEANISLSQKLSSFQKKFES-IAEDEKQLVEDIKELLSSHDQRN 781 (1041)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHhhhHHh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 88899999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhhhhHhHHHhhhhhhhhhhhHHHhHHHHHHHhhhhhhhhhhhHhhhhhcHHHHHHHHHHhhhhhh
Q 003781 640 KQLVQMAVQDLRESASSRTSQLQKEMSTMQDSTFSVKAEWSAHMNKTESHYLEDTSAVENGKKDLEVVLQNCLKQAKMGA 719 (796)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (796)
.++|..++..++..+......+...++.|+.+....|..|..+..+++++|.++..+++...+.|+..+..|...++++.
T Consensus 782 ~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~k~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 861 (1041)
T KOG0243|consen 782 NELLDIALQTLRSAVNSRESNLTESVSVMQNLSDDLKTIWQTLGKQNENHHNEVLSAIEEKQQAMKSVLKELLENAESQV 861 (1041)
T ss_pred HHHHHHHHHHHHHhhccchhHHHHhhHHHhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhHhHH-hHHHHHHHHHHHHHHHHHHHHHHhcccccce
Q 003781 720 QQWRTAQESLLNLEKNNVAAVDSIVRYEWKPIRTYMLGFL-LLCQLRSKMQMLQTAIFLHLLTIHCNLTKTH 790 (796)
Q Consensus 720 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (796)
.+|+.++.++.++...+++.++++++..-+.+..+-+.|. .++..-..+..+---| .|-|-.+.+.|
T Consensus 862 ~~~~~~~~~lk~~~~~~~~~~~~l~~~~~~~~~k~~~e~~s~~~~~~~~~~~~~~~i----~t~~~~~~~~~ 929 (1041)
T KOG0243|consen 862 DECKEAIESLKSLESNHVATLDSLVRGVSEQNKKLQDEFLSLLNSKLNSFDVLTNSI----VTPHSILLKLD 929 (1041)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHhhhhhhhHHhhHHHHHHHhHHHhhhhhccccc----ccccccccccc
Confidence 9999999999999999999999999999999999998888 6666655555443333 34454444443
|
|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01442 Apolipoprotein: Apolipoprotein A1/A4/E domain; InterPro: IPR000074 Exchangeable apolipoproteins (apoA, apoC and apoE) have the same genomic structure and are members of a multi-gene family that probably evolved from a common ancestral gene | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06705 SF-assemblin: SF-assemblin/beta giardin | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF01540 Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR002520 This family consists of the p50 and variable adherence-associated antigen (Vaa) adhesins from Mycoplasma hominis | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF07464 ApoLp-III: Apolipophorin-III precursor (apoLp-III); InterPro: IPR010009 This family consists of several insect apolipoprotein-III sequences | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 796 | ||||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 7e-77 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 3e-76 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 4e-76 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 4e-76 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 4e-76 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 5e-76 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 6e-76 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 6e-76 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 6e-76 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 4e-73 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-52 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 3e-51 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 5e-48 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-45 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 1e-43 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 1e-43 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 6e-42 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 4e-41 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-39 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 7e-39 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 1e-38 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-38 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-38 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 6e-38 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 7e-38 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 4e-37 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-35 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-35 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 1e-33 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-33 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 2e-33 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-33 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-33 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-32 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 3e-32 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 3e-32 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 5e-32 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 5e-32 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 5e-32 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 9e-32 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 3e-31 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 1e-30 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 6e-30 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 2e-29 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 1e-27 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 3e-26 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-26 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 2e-25 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 2e-25 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 9e-25 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-24 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-24 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-24 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 2e-23 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 5e-23 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-18 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 2e-16 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 4e-16 |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
|
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
Score = 434 bits (1118), Expect = e-146
Identities = 150/263 (57%), Positives = 194/263 (73%), Gaps = 11/263 (4%)
Query: 1 MEGGAR---KKNGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLAL 57
M G K + E SD G+IPRA+ +FD L EY+M++++LELYNEE+ DLL+
Sbjct: 118 MVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLS- 176
Query: 58 EETSKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLN 117
DD +K I KG V ++GLEE V + D++YK+LEKG +R+TA TL+N
Sbjct: 177 ------TDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMN 230
Query: 118 KQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREG-RAREAGEI 176
QSSRSH++FSI +HI+E EGE+M+K GKLNLVDLAGSEN+S++G +G R RE I
Sbjct: 231 AQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNI 290
Query: 177 NKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236
N+SLLTLGRVI ALV+ + HVPYR+SKLTRLL++SLGG+TKT IIAT+SP +EETLS
Sbjct: 291 NQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLS 350
Query: 237 TLDYAHRAKNIKNKPEINQKMMK 259
TL+YAHRAKNI+NKPE+NQK+ K
Sbjct: 351 TLEYAHRAKNIQNKPEVNQKLTK 373
|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 796 | |||
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.97 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.95 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 98.12 | |
| 3s84_A | 273 | Apolipoprotein A-IV; four helix bundle, transport | 96.92 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 96.85 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 96.74 | |
| 3s84_A | 273 | Apolipoprotein A-IV; four helix bundle, transport | 96.58 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 96.01 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 95.08 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 94.57 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 94.33 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 92.7 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 92.28 | |
| 2a01_A | 243 | Apolipoprotein A-I; four-helix bundle, lipid trans | 92.12 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 91.62 | |
| 2v66_B | 111 | Nuclear distribution protein NUDE-like 1; structur | 91.36 | |
| 2a01_A | 243 | Apolipoprotein A-I; four-helix bundle, lipid trans | 91.31 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 90.68 | |
| 3o0z_A | 168 | RHO-associated protein kinase 1; coiled-coil, tran | 89.67 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 89.42 | |
| 3ol1_A | 119 | Vimentin; structural genomics, PSI-2, protein stru | 84.12 | |
| 3ghg_A | 562 | Fibrinogen alpha chain; triple-stranded coiled coi | 83.11 | |
| 2v66_B | 111 | Nuclear distribution protein NUDE-like 1; structur | 81.93 | |
| 3ghg_A | 562 | Fibrinogen alpha chain; triple-stranded coiled coi | 80.86 |
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-66 Score=572.22 Aligned_cols=271 Identities=38% Similarity=0.575 Sum_probs=239.1
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQH--AEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~~--~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|..|. +.++|||||++.+||+.+.... ..|.|+|||+|||||.|+|||+|.+. .+..+.|++|+.
T Consensus 91 SGKTyTM~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~~l~i~e~~~ 162 (369)
T 3cob_A 91 SGKTFTIYGA-DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA-------KRLKLDIKKDSK 162 (369)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------CCCCCEEEECTT
T ss_pred CCCeEeecCC-CCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCccc-------CCcceEEEECCC
Confidence 4556666665 6789999999999999998754 48999999999999999999987541 245799999999
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|...... ......|+|+|||||||||
T Consensus 163 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---~~~~~~skL~lVDLAGSEr 239 (369)
T 3cob_A 163 GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ---TQAIARGKLSFVDLAGSER 239 (369)
T ss_dssp SCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT---TCCEEEEEEEEEECCCSSC
T ss_pred CCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC---CCcEEEEEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999876543 2345789999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
.+++++.|.|++||.+||+||++||+||.||+++..|||||||||||||||||||||+|+|||||||+..+++||++||+
T Consensus 240 ~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLr 319 (369)
T 3cob_A 240 VKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLT 319 (369)
T ss_dssp CCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCccch
Q 003781 240 YAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRY 293 (796)
Q Consensus 240 fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~el~~~r~k~gv~~~~~~~ 293 (796)
||.|||+|+|+|.+|..+ .||.+||+++..++++.|.+.+.+.|
T Consensus 320 fA~rak~i~~~~~~n~~~----------~ei~~L~~~l~~~~~~~~~~~~~~~~ 363 (369)
T 3cob_A 320 YASRVRSIVNDPSKNVSS----------KEVARLKKLVSYWKEQAGRKGDDEEL 363 (369)
T ss_dssp HHHHHHTCBCCCCCCEEC----------HHHHHHHHHTTCC-----------CC
T ss_pred HHHHHhhcccCCcccCCH----------HHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 999999999999999975 68889999998888888887766554
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0* | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0* | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* | Back alignment and structure |
|---|
| >2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 796 | ||||
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 2e-69 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-58 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 2e-57 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 8e-55 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 1e-54 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 8e-52 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 6e-51 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 2e-49 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-45 |
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]
Score = 230 bits (587), Expect = 2e-69
Identities = 147/242 (60%), Positives = 180/242 (74%), Gaps = 5/242 (2%)
Query: 9 NGEFPSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKS 68
E AG+IPR + QIF+ L E+S+KV+ LE+YNEE+ DLL D
Sbjct: 109 TWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSS-----DVSE 163
Query: 69 KKPIALMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFS 128
+ + K GV ++GLEE V DE+Y+ILEKG+AKR TA TL+N SSRSHS+FS
Sbjct: 164 RLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFS 223
Query: 129 ITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVIN 188
+TIH+KE T +GEE++K GKLNLVDLAGSENI RSGA + RAREAG IN+SLLTLGRVI
Sbjct: 224 VTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVIT 283
Query: 189 ALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIK 248
ALVE + HVPYR+SKLTR+L+DSLGG+T+T IIAT+SP+ LEETLSTL+YAHRAKNI
Sbjct: 284 ALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNIL 343
Query: 249 NK 250
NK
Sbjct: 344 NK 345
|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
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| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
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| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
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| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
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| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
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| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 796 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=1.5e-59 Score=514.44 Aligned_cols=263 Identities=37% Similarity=0.572 Sum_probs=225.1
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|.+|+ +.++|||||++.+||..+... ...|.|++||+|||||.|+|||+|... ...++.+++|+.
T Consensus 86 SGKTyTm~G~-~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~-------~~~~l~~~~~~~ 157 (364)
T d1sdma_ 86 SGKTFTIYGA-DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA-------KRLKLDIKKDSK 157 (364)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTS-------CCCCCEEEECTT
T ss_pred CCcccccccC-ccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccc-------cccccceeeccc
Confidence 4666666775 678999999999999999764 458999999999999999999987542 234688999999
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
+|++|.|++++.|.|++|++.+|..|..+|.+++|.+|..|||||+||+|++....... .....|+|+|||||||||
T Consensus 158 ~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~---~~~~~~kl~~vDLAGsEr 234 (364)
T d1sdma_ 158 GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT---QAIARGKLSFVDLAGSER 234 (364)
T ss_dssp SCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCCSC
T ss_pred CccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCc---ceeeeEEEEeechhhccc
Confidence 99999999999999999999999999999999999999999999999999998765432 345789999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
..++++.|.+++|+..||+||++||+||.+|+++..|||||+|||||||+|+|||||+|+|||||||+..+++||++||+
T Consensus 235 ~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~ 314 (364)
T d1sdma_ 235 VKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLT 314 (364)
T ss_dssp CCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred cccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCccccccccccchHHHHHHHHHHHHHHHHHHH
Q 003781 240 YAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVY 278 (796)
Q Consensus 240 fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~el~ 278 (796)
||.||++|+|+|.+|... ..+.+|..++..|+.++.
T Consensus 315 fa~~ak~i~n~p~~n~~~---~~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 315 YASRVRSIVNDPSKNVSS---KEVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHHHHTTCCCCCCCCEEC---HHHHHHHTTTTCC-----
T ss_pred HHHHHhhcccCCcccCCH---HHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 235666666666666553
|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|