Citrus Sinensis ID: 003797
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 795 | 2.2.26 [Sep-21-2011] | |||||||
| P49608 | 898 | Aconitate hydratase, cyto | N/A | no | 1.0 | 0.885 | 0.923 | 0.0 | |
| Q6YZX6 | 898 | Putative aconitate hydrat | yes | no | 1.0 | 0.885 | 0.898 | 0.0 | |
| Q9SIB9 | 990 | Aconitate hydratase 2, mi | yes | no | 1.0 | 0.803 | 0.893 | 0.0 | |
| Q42560 | 898 | Aconitate hydratase 1 OS= | no | no | 1.0 | 0.885 | 0.861 | 0.0 | |
| Q94A28 | 995 | Aconitate hydratase 3, mi | no | no | 0.996 | 0.795 | 0.830 | 0.0 | |
| Q42669 | 764 | Aconitate hydratase (Frag | N/A | no | 0.948 | 0.986 | 0.847 | 0.0 | |
| O04916 | 616 | Aconitate hydratase, cyto | N/A | no | 0.774 | 1.0 | 0.884 | 0.0 | |
| P21399 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.993 | 0.888 | 0.615 | 0.0 | |
| Q54X73 | 894 | Probable cytoplasmic acon | yes | no | 0.994 | 0.884 | 0.618 | 0.0 | |
| P28271 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.993 | 0.888 | 0.623 | 0.0 |
| >sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 | Back alignment and function desciption |
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Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/795 (92%), Positives = 770/795 (96%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDV RSENAV+ANMELEFQRNKERFAFLKW
Sbjct: 104 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 163
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 164 GSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTSGLLYPDSVVGTDSHTTMIDGLGVAGW 223
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKL NGVTATDLVLTVTQMLRKHGVVGKFVE
Sbjct: 224 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVE 283
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F+GDGM ELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV+M+E YLRA
Sbjct: 284 FYGDGMEELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVSMIEAYLRA 343
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
NKMFVDY EPQQE+VYSSYL+L+L DVEPCISGPKRPHDRVPLKEMK+DWH+CLDNKVGF
Sbjct: 344 NKMFVDYKEPQQEKVYSSYLQLDLTDVEPCISGPKRPHDRVPLKEMKSDWHACLDNKVGF 403
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGFA+PKE QE V KFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGA LVAKKACEL
Sbjct: 404 KGFAIPKEAQENVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKACEL 463
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GLQVKPWVKTSLAPGSGVVTKYLL+SGLQ YLN+QGFHIVGYGCTTCIGNSGDLDESV++
Sbjct: 464 GLQVKPWVKTSLAPGSGVVTKYLLKSGLQPYLNQQGFHIVGYGCTTCIGNSGDLDESVSA 523
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
I+DNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDF+KEPIG K
Sbjct: 524 AISDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKGK 583
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
DGK VYF+DIWP+TEEIAEVVQSSVLPDMFKSTYE+ITKGNP WNQLSVP+ LYSWDPN
Sbjct: 584 DGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYESITKGNPMWNQLSVPSGTLYSWDPN 643
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYIHEPPYFK+MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP AKYLLER
Sbjct: 644 STYIHEPPYFKNMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLER 703
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
GV+R+DFNSYGSRRGNDEVMARGTFANIRLVNKLL+GEVGPKTVHVPTGEKLSVF+AA K
Sbjct: 704 GVDRKDFNSYGSRRGNDEVMARGTFANIRLVNKLLDGEVGPKTVHVPTGEKLSVFEAAEK 763
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YKSAG TI+LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 764 YKSAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 823
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
K+GEDADSLGLTGHER++IDLP IS+IRPGQDVTVTTDSGKSFTCTVRFDTEVELAYF+
Sbjct: 824 KSGEDADSLGLTGHERYTIDLPDDISKIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFN 883
Query: 781 HGGILPFVIRNLIKQ 795
+GGILP+VIRNLIKQ
Sbjct: 884 NGGILPYVIRNLIKQ 898
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Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Cucurbita maxima (taxid: 3661) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 | Back alignment and function description |
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| >sp|O04916|ACOC_SOLTU Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
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| >sp|P21399|ACOC_HUMAN Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P28271|ACOC_MOUSE Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 795 | ||||||
| 285309969 | 898 | aconitate hydratase 2 [Citrus clementina | 1.0 | 0.885 | 0.996 | 0.0 | |
| 326378233 | 883 | aconitase protein [Litchi chinensis] | 1.0 | 0.900 | 0.933 | 0.0 | |
| 449493135 | 989 | PREDICTED: aconitate hydratase, cytoplas | 1.0 | 0.803 | 0.922 | 0.0 | |
| 449453502 | 989 | PREDICTED: aconitate hydratase, cytoplas | 1.0 | 0.803 | 0.920 | 0.0 | |
| 1351856 | 898 | RecName: Full=Aconitate hydratase, cytop | 1.0 | 0.885 | 0.923 | 0.0 | |
| 225447278 | 987 | PREDICTED: aconitate hydratase, cytoplas | 1.0 | 0.805 | 0.916 | 0.0 | |
| 255566397 | 997 | aconitase, putative [Ricinus communis] g | 0.998 | 0.796 | 0.914 | 0.0 | |
| 356517636 | 979 | PREDICTED: aconitate hydratase, cytoplas | 1.0 | 0.812 | 0.919 | 0.0 | |
| 357471289 | 979 | Aconitate hydratase [Medicago truncatula | 1.0 | 0.812 | 0.909 | 0.0 | |
| 224064986 | 898 | predicted protein [Populus trichocarpa] | 1.0 | 0.885 | 0.910 | 0.0 |
| >gi|285309969|emb|CBE71058.1| aconitate hydratase 2 [Citrus clementina] | Back alignment and taxonomy information |
|---|
Score = 1640 bits (4248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/795 (99%), Positives = 793/795 (99%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANME EFQRNKERFAFLKW
Sbjct: 104 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKW 163
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 164 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 223
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE
Sbjct: 224 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 283
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDET+AMVEGYLRA
Sbjct: 284 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETLAMVEGYLRA 343
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF
Sbjct: 344 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 403
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL
Sbjct: 404 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 463
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS
Sbjct: 464 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 523
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
ITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK
Sbjct: 524 AITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 583
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN
Sbjct: 584 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 643
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER
Sbjct: 644 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 703
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK
Sbjct: 704 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 763
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 764 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 823
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD
Sbjct: 824 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 883
Query: 781 HGGILPFVIRNLIKQ 795
HGGILPFVIRNLIKQ
Sbjct: 884 HGGILPFVIRNLIKQ 898
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Source: Citrus clementina Species: Citrus clementina Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326378233|gb|ADZ57218.1| aconitase protein [Litchi chinensis] | Back alignment and taxonomy information |
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| >gi|449493135|ref|XP_004159202.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449453502|ref|XP_004144496.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|1351856|sp|P49608.1|ACOC_CUCMA RecName: Full=Aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full=Citrate hydro-lyase gi|7437043|pir||T10101 aconitate hydratase (EC 4.2.1.3) - cucurbit gi|868003|dbj|BAA06108.1| aconitase [Cucurbita cv. Kurokawa Amakuri] | Back alignment and taxonomy information |
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| >gi|225447278|ref|XP_002279260.1| PREDICTED: aconitate hydratase, cytoplasmic [Vitis vinifera] gi|297739284|emb|CBI28935.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255566397|ref|XP_002524184.1| aconitase, putative [Ricinus communis] gi|223536553|gb|EEF38199.1| aconitase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356517636|ref|XP_003527493.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357471289|ref|XP_003605929.1| Aconitate hydratase [Medicago truncatula] gi|355506984|gb|AES88126.1| Aconitate hydratase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224064986|ref|XP_002301623.1| predicted protein [Populus trichocarpa] gi|222843349|gb|EEE80896.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 795 | ||||||
| TAIR|locus:2063354 | 990 | ACO3 "AT2G05710" [Arabidopsis | 1.0 | 0.803 | 0.872 | 0.0 | |
| TAIR|locus:2125354 | 898 | ACO1 "AT4G35830" [Arabidopsis | 1.0 | 0.885 | 0.841 | 0.0 | |
| TAIR|locus:2116297 | 995 | ACO2 "AT4G26970" [Arabidopsis | 0.996 | 0.795 | 0.809 | 0.0 | |
| ZFIN|ZDB-GENE-031118-76 | 896 | aco1 "aconitase 1, soluble" [D | 0.991 | 0.879 | 0.606 | 8.3e-264 | |
| MGI|MGI:87879 | 889 | Aco1 "aconitase 1" [Mus muscul | 0.991 | 0.886 | 0.606 | 9.6e-263 | |
| UNIPROTKB|Q01059 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.993 | 0.888 | 0.602 | 2.5e-262 | |
| UNIPROTKB|F1NY25 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.991 | 0.886 | 0.603 | 5.3e-262 | |
| UNIPROTKB|Q90875 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.991 | 0.886 | 0.603 | 5.3e-262 | |
| UNIPROTKB|Q0VCU1 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.993 | 0.888 | 0.598 | 1.8e-261 | |
| UNIPROTKB|I3LJW4 | 898 | ACO1 "Uncharacterized protein" | 0.993 | 0.879 | 0.599 | 3.7e-261 |
| TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3684 (1301.9 bits), Expect = 0., P = 0.
Identities = 694/795 (87%), Positives = 745/795 (93%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDV RSENAV+ANMELEFQRNKERFAFLKW
Sbjct: 196 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 255
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXX 120
GS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT G+LYPDSVVGTDSHTTMID
Sbjct: 256 GSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTKGLLYPDSVVGTDSHTTMIDGLGVAGW 315
Query: 121 XXXXXXXXXXMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
MLGQPMSMVLPGVVGFKL+GK+ NGVTATDLVLTVTQMLRKHGVVGKFVE
Sbjct: 316 GVGGIEAEATMLGQPMSMVLPGVVGFKLAGKMRNGVTATDLVLTVTQMLRKHGVVGKFVE 375
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F+G+GM LSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM+E YLRA
Sbjct: 376 FYGNGMSGLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRA 435
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
N MFVDYNEPQQ+RVYSSYLELNL DVEPCISGPKRPHDRV LKEMKADWHSCLD+KVGF
Sbjct: 436 NNMFVDYNEPQQDRVYSSYLELNLDDVEPCISGPKRPHDRVTLKEMKADWHSCLDSKVGF 495
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGFA+PKE QEKVV FSF GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAC+L
Sbjct: 496 KGFAIPKEAQEKVVNFSFDGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACDL 555
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GLQVKPW+KTSLAPGSGVVTKYLL+SGLQ+YLNEQGF+IVGYGCTTCIGNSG+++ESV +
Sbjct: 556 GLQVKPWIKTSLAPGSGVVTKYLLKSGLQEYLNEQGFNIVGYGCTTCIGNSGEINESVGA 615
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT+NDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTV+IDF+ EPIG K
Sbjct: 616 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVNIDFETEPIGKGK 675
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
+GK V+ +DIWPTTEEIAEVVQSSVLPDMF++TYE+ITKGNP WN+LSVP + LYSWDPN
Sbjct: 676 NGKDVFLRDIWPTTEEIAEVVQSSVLPDMFRATYESITKGNPMWNKLSVPENTLYSWDPN 735
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYIHEPPYFKDMTMDPPG H VKDAYCLLNFGDSITTDHISPAG+I KDSP AK+L+ER
Sbjct: 736 STYIHEPPYFKDMTMDPPGPHNVKDAYCLLNFGDSITTDHISPAGNIQKDSPAAKFLMER 795
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
GV+R+DFNSYGSRRGNDE+MARGTFANIR+VNKL+NGEVGPKTVH+P+GEKLSVFDAAM+
Sbjct: 796 GVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLMNGEVGPKTVHIPSGEKLSVFDAAMR 855
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YKS+G TIILAGAEYGSGSSRDWAAKGPML GVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 856 YKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLVGMGIIPLCF 915
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
K+GEDAD+LGLTGHER++I LP+ ISEIRPGQDVTVTTD+GKSFTCTVRFDTEVELAYF+
Sbjct: 916 KSGEDADTLGLTGHERYTIHLPTDISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFN 975
Query: 781 HGGILPFVIRNLIKQ 795
HGGILP+VIRNL KQ
Sbjct: 976 HGGILPYVIRNLSKQ 990
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| TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-031118-76 aco1 "aconitase 1, soluble" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:87879 Aco1 "aconitase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q01059 ACO1 "Cytoplasmic aconitate hydratase" [Oryctolagus cuniculus (taxid:9986)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0VCU1 ACO1 "Cytoplasmic aconitate hydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LJW4 ACO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6YZX6 | ACOC_ORYSJ | 4, ., 2, ., 1, ., 3 | 0.8981 | 1.0 | 0.8853 | yes | no |
| Q6G9K9 | ACON_STAAS | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9937 | 0.8768 | yes | no |
| P63433 | ACON_STAAM | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9937 | 0.8768 | yes | no |
| P09339 | ACON_BACSU | 4, ., 2, ., 1, ., 3 | 0.5657 | 0.9911 | 0.8668 | yes | no |
| Q90875 | ACOC_CHICK | 4, ., 2, ., 1, ., 3 | 0.6224 | 0.9911 | 0.8863 | yes | no |
| Q0VCU1 | ACOC_BOVIN | 4, ., 2, ., 1, ., 3 | 0.6171 | 0.9937 | 0.8886 | yes | no |
| Q68VV0 | ACON_RICTY | 4, ., 2, ., 1, ., 3 | 0.5452 | 0.9723 | 0.8804 | yes | no |
| Q92G90 | ACON_RICCN | 4, ., 2, ., 1, ., 3 | 0.5617 | 0.9748 | 0.8826 | yes | no |
| Q9SIB9 | ACO2M_ARATH | 4, ., 2, ., 1, ., 3 | 0.8930 | 1.0 | 0.8030 | yes | no |
| Q9RTN7 | ACON_DEIRA | 4, ., 2, ., 1, ., 3 | 0.5591 | 0.9911 | 0.8697 | yes | no |
| P99148 | ACON_STAAN | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9937 | 0.8768 | yes | no |
| Q54X73 | ACOC_DICDI | 4, ., 2, ., 1, ., 3 | 0.6188 | 0.9949 | 0.8847 | yes | no |
| O04916 | ACOC_SOLTU | 4, ., 2, ., 1, ., 3 | 0.8847 | 0.7748 | 1.0 | N/A | no |
| Q8NQ98 | ACON_CORGL | 4, ., 2, ., 1, ., 3 | 0.5089 | 0.9937 | 0.8413 | yes | no |
| P28271 | ACOC_MOUSE | 4, ., 2, ., 1, ., 3 | 0.6234 | 0.9937 | 0.8886 | yes | no |
| P49608 | ACOC_CUCMA | 4, ., 2, ., 1, ., 3 | 0.9232 | 1.0 | 0.8853 | N/A | no |
| Q6GH55 | ACON_STAAR | 4, ., 2, ., 1, ., 3 | 0.5597 | 0.9937 | 0.8768 | yes | no |
| Q2A1K3 | ACON_FRATH | 4, ., 2, ., 1, ., 3 | 0.5461 | 0.9861 | 0.8367 | yes | no |
| Q42669 | ACOC_CUCMC | 4, ., 2, ., 1, ., 3 | 0.8477 | 0.9484 | 0.9869 | N/A | no |
| Q5HPJ0 | ACON_STAEQ | 4, ., 2, ., 1, ., 3 | 0.5597 | 0.9937 | 0.8768 | yes | no |
| Q01059 | ACOC_RABIT | 4, ., 2, ., 1, ., 3 | 0.6209 | 0.9937 | 0.8886 | yes | no |
| Q4UK20 | ACON_RICFE | 4, ., 2, ., 1, ., 3 | 0.5565 | 0.9723 | 0.8804 | yes | no |
| P63434 | ACON_STAAW | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9937 | 0.8768 | yes | no |
| Q9ZCF4 | ACON_RICPR | 4, ., 2, ., 1, ., 3 | 0.5419 | 0.9685 | 0.8769 | yes | no |
| Q42560 | ACO1_ARATH | 4, ., 2, ., 1, ., 3 | 0.8616 | 1.0 | 0.8853 | no | no |
| P21399 | ACOC_HUMAN | 4, ., 2, ., 1, ., 3 | 0.6158 | 0.9937 | 0.8886 | yes | no |
| Q8CPC2 | ACON_STAES | 4, ., 2, ., 1, ., 3 | 0.5597 | 0.9937 | 0.8768 | yes | no |
| Q8FTA8 | ACON_COREF | 4, ., 2, ., 1, ., 3 | 0.5137 | 0.9937 | 0.8431 | yes | no |
| Q63270 | ACOC_RAT | 4, ., 2, ., 1, ., 3 | 0.6183 | 0.9937 | 0.8886 | yes | no |
| Q9I3F5 | ACON1_PSEAE | 4, ., 2, ., 1, ., 3 | 0.5794 | 0.9798 | 0.8560 | yes | no |
| A0QX20 | ACON_MYCS2 | 4, ., 2, ., 1, ., 3 | 0.5273 | 0.9899 | 0.8345 | yes | no |
| Q1RKD5 | ACON_RICBR | 4, ., 2, ., 1, ., 3 | 0.5489 | 0.9786 | 0.8790 | yes | no |
| P70920 | ACON_BRAJA | 4, ., 2, ., 1, ., 3 | 0.5510 | 0.9811 | 0.8609 | yes | no |
| Q59938 | ACON_STRMU | 4, ., 2, ., 1, ., 3 | 0.5384 | 0.9836 | 0.8806 | yes | no |
| Q23500 | ACOC_CAEEL | 4, ., 2, ., 1, ., 3 | 0.6176 | 0.9924 | 0.8895 | yes | no |
| P25516 | ACON1_ECOLI | 4, ., 2, ., 1, ., 3 | 0.5610 | 0.9823 | 0.8765 | N/A | no |
| Q6NH63 | ACON_CORDI | 4, ., 2, ., 1, ., 3 | 0.5250 | 0.9911 | 0.8436 | yes | no |
| P37032 | ACON_LEGPH | 4, ., 2, ., 1, ., 3 | 0.5737 | 0.9773 | 0.8720 | yes | no |
| Q4JVM4 | ACON_CORJK | 4, ., 2, ., 1, ., 3 | 0.5238 | 0.9899 | 0.8408 | yes | no |
| Q5HG69 | ACON_STAAC | 4, ., 2, ., 1, ., 3 | 0.5609 | 0.9937 | 0.8768 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.2.1 | 0.998 |
| 3rd Layer | 4.2.1.3 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | GSVIVG00026023001 | SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (987 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00026043001 | • | • | 0.945 | |||||||
 | GSVIVG00023212001 | • | • | • | 0.930 | ||||||
 | GSVIVG00003727001 | • | • | • | 0.928 | ||||||
 | GSVIVG00011753001 | • | • | • | 0.917 | ||||||
 | GSVIVG00036195001 | • | • | • | 0.916 | ||||||
 | GSVIVG00002132001 | • | • | 0.912 | |||||||
 | GSVIVG00023479001 | • | • | 0.912 | |||||||
 | GSVIVG00038599001 | • | 0.899 | ||||||||
 | GSVIVG00033143001 | • | 0.899 | ||||||||
 | GSVIVG00022538001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 795 | |||
| PLN00070 | 936 | PLN00070, PLN00070, aconitate hydratase | 0.0 | |
| PTZ00092 | 898 | PTZ00092, PTZ00092, aconitate hydratase-like prote | 0.0 | |
| PRK09277 | 888 | PRK09277, PRK09277, aconitate hydratase; Validated | 0.0 | |
| TIGR01341 | 876 | TIGR01341, aconitase_1, aconitate hydratase 1 | 0.0 | |
| PRK12881 | 889 | PRK12881, acnA, aconitate hydratase; Provisional | 0.0 | |
| COG1048 | 861 | COG1048, AcnA, Aconitase A [Energy production and | 0.0 | |
| cd01586 | 404 | cd01586, AcnA_IRP, Aconitase A catalytic domain | 0.0 | |
| TIGR02333 | 858 | TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh | 0.0 | |
| pfam00330 | 464 | pfam00330, Aconitase, Aconitase family (aconitate | 1e-148 | |
| cd01580 | 171 | cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai | 1e-111 | |
| cd01351 | 389 | cd01351, Aconitase, Aconitase catalytic domain; Ac | 5e-88 | |
| TIGR01340 | 745 | TIGR01340, aconitase_mito, aconitate hydratase, mi | 4e-71 | |
| TIGR01342 | 658 | TIGR01342, acon_putative, aconitate hydratase, put | 7e-70 | |
| pfam00694 | 131 | pfam00694, Aconitase_C, Aconitase C-terminal domai | 7e-57 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 5e-55 | |
| cd01584 | 412 | cd01584, AcnA_Mitochondrial, Aconitase catalyzes t | 4e-54 | |
| cd01585 | 380 | cd01585, AcnA_Bact, Aconitase catalyzes the revers | 3e-52 | |
| cd01583 | 382 | cd01583, IPMI, 3-isopropylmalate dehydratase catal | 4e-46 | |
| COG0065 | 423 | COG0065, LeuC, 3-isopropylmalate dehydratase large | 5e-41 | |
| TIGR02083 | 419 | TIGR02083, LEU2, 3-isopropylmalate dehydratase, la | 1e-31 | |
| TIGR02086 | 412 | TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas | 1e-31 | |
| PRK12466 | 471 | PRK12466, PRK12466, isopropylmalate isomerase larg | 4e-30 | |
| PRK00402 | 418 | PRK00402, PRK00402, 3-isopropylmalate dehydratase | 6e-30 | |
| TIGR01343 | 412 | TIGR01343, hacA_fam, homoaconitate hydratase famil | 6e-30 | |
| TIGR00170 | 465 | TIGR00170, leuC, 3-isopropylmalate dehydratase, la | 2e-27 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 1e-26 | |
| cd01582 | 363 | cd01582, Homoaconitase, Homoaconitase and other un | 4e-26 | |
| TIGR00139 | 712 | TIGR00139, h_aconitase, homoaconitase | 5e-26 | |
| cd01579 | 121 | cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik | 4e-23 | |
| cd00404 | 88 | cd00404, Aconitase_swivel, Aconitase swivel domain | 4e-20 | |
| cd01578 | 149 | cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi | 1e-17 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 8e-14 | |
| cd01577 | 91 | cd01577, IPMI_Swivel, Aconatase-like swivel domain | 1e-12 | |
| COG0066 | 191 | COG0066, LeuD, 3-isopropylmalate dehydratase small | 1e-12 | |
| PRK14023 | 166 | PRK14023, PRK14023, homoaconitate hydratase small | 5e-11 | |
| cd01581 | 436 | cd01581, AcnB, Aconitate hydratase B catalyses the | 2e-10 | |
| COG1049 | 852 | COG1049, AcnB, Aconitase B [Energy production and | 7e-10 | |
| PRK11413 | 751 | PRK11413, PRK11413, putative hydratase; Provisiona | 1e-09 | |
| PRK00439 | 163 | PRK00439, leuD, 3-isopropylmalate dehydratase smal | 1e-09 | |
| TIGR02087 | 154 | TIGR02087, LEUD_arch, 3-isopropylmalate dehydratas | 2e-09 | |
| TIGR00117 | 844 | TIGR00117, acnB, aconitate hydratase 2 | 9e-09 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 2e-06 | |
| PRK01641 | 200 | PRK01641, leuD, isopropylmalate isomerase small su | 3e-06 | |
| TIGR02084 | 156 | TIGR02084, leud, 3-isopropylmalate dehydratase, sm | 2e-05 | |
| PRK09238 | 835 | PRK09238, PRK09238, bifunctional aconitate hydrata | 3e-05 | |
| PLN00094 | 938 | PLN00094, PLN00094, aconitate hydratase 2; Provisi | 1e-04 | |
| PLN00072 | 246 | PLN00072, PLN00072, 3-isopropylmalate isomerase/de | 0.001 | |
| TIGR00171 | 188 | TIGR00171, leuD, 3-isopropylmalate dehydratase, sm | 0.002 | |
| PRK14812 | 119 | PRK14812, PRK14812, hypothetical protein; Provisio | 0.004 |
| >gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase | Back alignment and domain information |
|---|
Score = 1801 bits (4667), Expect = 0.0
Identities = 731/795 (91%), Positives = 768/795 (96%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDAMN LG D NKINPLVPVDLVIDHSVQVDV RSENAV+ANMELEFQRNKERFAFLKW
Sbjct: 142 MRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKW 201
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGW
Sbjct: 202 GSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGW 261
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKL +GVTATDLVLTVTQMLRKHGVVGKFVE
Sbjct: 262 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVE 321
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F+G+GM ELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM+E YLRA
Sbjct: 322 FYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRA 381
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
NKMFVDYNEPQQERVYSSYLEL+L DVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF
Sbjct: 382 NKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 441
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGFAVPKE Q KV KFSFHGQPAEL+HGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL
Sbjct: 442 KGFAVPKEAQSKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 501
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GL+VKPW+KTSLAPGSGVVTKYLL+SGLQKYLN+QGFHIVGYGCTTCIGNSG+LDESVAS
Sbjct: 502 GLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVAS 561
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT+NDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDF+KEPIGT K
Sbjct: 562 AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGK 621
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
DGK V+F+DIWP+ EE+AEVVQSSVLPDMFKSTYEAITKGNP WNQLSVP+ LYSWDP
Sbjct: 622 DGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPK 681
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYIHEPPYFK+MTM PPG HGVKDAYCLLNFGDSITTDHISPAGSIHKDSP AKYL+ER
Sbjct: 682 STYIHEPPYFKNMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMER 741
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
GV+R+DFNSYGSRRGNDE+MARGTFANIR+VNKLL GEVGPKTVH+PTGEKLSVFDAAMK
Sbjct: 742 GVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKLSVFDAAMK 801
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
YKS GH TIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF
Sbjct: 802 YKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 861
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
K+GEDAD+LGLTGHER++IDLPS ISEI+PGQDVTVTTD+GKSFTCT+RFDTEVELAYFD
Sbjct: 862 KSGEDADTLGLTGHERYTIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYFD 921
Query: 781 HGGILPFVIRNLIKQ 795
HGGILP+VIRNLIKQ
Sbjct: 922 HGGILPYVIRNLIKQ 936
|
Length = 936 |
| >gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) | Back alignment and domain information |
|---|
| >gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase | Back alignment and domain information |
|---|
| >gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238809 cd01577, IPMI_Swivel, Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >gnl|CDD|223144 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|184460 PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234762 PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233716 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|179314 PRK01641, leuD, isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131139 TIGR02084, leud, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|177701 PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129275 TIGR00171, leuD, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|173273 PRK14812, PRK14812, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 795 | |||
| PLN00070 | 936 | aconitate hydratase | 100.0 | |
| PTZ00092 | 898 | aconitate hydratase-like protein; Provisional | 100.0 | |
| KOG0452 | 892 | consensus RNA-binding translational regulator IRP | 100.0 | |
| TIGR01341 | 876 | aconitase_1 aconitate hydratase 1. This model repr | 100.0 | |
| PRK12881 | 889 | acnA aconitate hydratase; Provisional | 100.0 | |
| PRK09277 | 888 | aconitate hydratase; Validated | 100.0 | |
| TIGR02333 | 858 | 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe | 100.0 | |
| COG1048 | 861 | AcnA Aconitase A [Energy production and conversion | 100.0 | |
| TIGR01340 | 745 | aconitase_mito aconitate hydratase, mitochondrial. | 100.0 | |
| PRK07229 | 646 | aconitate hydratase; Validated | 100.0 | |
| TIGR01342 | 658 | acon_putative aconitate hydratase, putative, Aquif | 100.0 | |
| TIGR00139 | 712 | h_aconitase homoaconitase. Homoaconitase, aconitas | 100.0 | |
| PRK11413 | 751 | putative hydratase; Provisional | 100.0 | |
| KOG0453 | 778 | consensus Aconitase/homoaconitase (aconitase super | 100.0 | |
| cd01586 | 404 | AcnA_IRP Aconitase A catalytic domain. Aconitase A | 100.0 | |
| TIGR00170 | 465 | leuC 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| cd01584 | 412 | AcnA_Mitochondrial Aconitase catalyzes the reversi | 100.0 | |
| PRK12466 | 471 | isopropylmalate isomerase large subunit; Provision | 100.0 | |
| PRK05478 | 466 | isopropylmalate isomerase large subunit; Validated | 100.0 | |
| PF00330 | 465 | Aconitase: Aconitase family (aconitate hydratase); | 100.0 | |
| cd01583 | 382 | IPMI 3-isopropylmalate dehydratase catalyzes the i | 100.0 | |
| cd01585 | 380 | AcnA_Bact Aconitase catalyzes the reversible isome | 100.0 | |
| COG0065 | 423 | LeuC 3-isopropylmalate dehydratase large subunit [ | 100.0 | |
| TIGR01343 | 412 | hacA_fam homoaconitate hydratase family protein. T | 100.0 | |
| TIGR02086 | 412 | IPMI_arch 3-isopropylmalate dehydratase, large sub | 100.0 | |
| PRK00402 | 418 | 3-isopropylmalate dehydratase large subunit; Revie | 100.0 | |
| TIGR02083 | 419 | LEU2 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| cd01582 | 363 | Homoaconitase Homoaconitase and other uncharacteri | 100.0 | |
| cd01581 | 436 | AcnB Aconitate hydratase B catalyses the formation | 100.0 | |
| cd01351 | 389 | Aconitase Aconitase catalytic domain; Aconitase ca | 100.0 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 100.0 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 100.0 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 100.0 | |
| cd01580 | 171 | AcnA_IRP_Swivel Aconitase A swivel domain. This is | 100.0 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 100.0 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 100.0 | |
| cd01578 | 149 | AcnA_Mitochon_Swivel Mitochondrial aconitase A swi | 100.0 | |
| COG0066 | 191 | LeuD 3-isopropylmalate dehydratase small subunit [ | 100.0 | |
| PRK00439 | 163 | leuD 3-isopropylmalate dehydratase small subunit; | 100.0 | |
| TIGR02084 | 156 | leud 3-isopropylmalate dehydratase, small subunit. | 100.0 | |
| PRK14023 | 166 | homoaconitate hydratase small subunit; Provisional | 100.0 | |
| TIGR02087 | 154 | LEUD_arch 3-isopropylmalate dehydratase, small sub | 100.0 | |
| PLN00072 | 246 | 3-isopropylmalate isomerase/dehydratase small subu | 100.0 | |
| TIGR00171 | 188 | leuD 3-isopropylmalate dehydratase, small subunit. | 100.0 | |
| PRK01641 | 200 | leuD isopropylmalate isomerase small subunit; Prov | 100.0 | |
| cd01579 | 121 | AcnA_Bact_Swivel Bacterial Aconitase-like swivel d | 99.98 | |
| PF00694 | 131 | Aconitase_C: Aconitase C-terminal domain CAUTION: | 99.98 | |
| cd01577 | 91 | IPMI_Swivel Aconatase-like swivel domain of 3-isop | 99.96 | |
| cd00404 | 88 | Aconitase_swivel Aconitase swivel domain. Aconitas | 99.96 | |
| cd01674 | 129 | Homoaconitase_Swivel Homoaconitase swivel domain. | 99.95 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 99.94 | |
| cd01576 | 131 | AcnB_Swivel Aconitase B swivel domain. Aconitate h | 99.92 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 99.91 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 99.9 | |
| PRK14812 | 119 | hypothetical protein; Provisional | 99.81 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 99.8 | |
| PF06434 | 204 | Aconitase_2_N: Aconitate hydratase 2 N-terminus; I | 98.29 | |
| PF04412 | 400 | DUF521: Protein of unknown function (DUF521); Inte | 96.25 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 96.1 | |
| COG1679 | 403 | Predicted aconitase [General function prediction o | 94.43 | |
| cd01355 | 389 | AcnX Putative Aconitase X catalytic domain. Putati | 92.2 |
| >PLN00070 aconitate hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-236 Score=2038.78 Aligned_cols=795 Identities=92% Similarity=1.435 Sum_probs=765.9
Q ss_pred ChHHHHhcCCCCCccCCCCceEEEecccccCCCCCchhHHHHHHHHHHHHhhhhhhhhhhhccccCcceeeCCCCceecc
Q 003797 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQ 80 (795)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~lviDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~f~~~~~~~pg~GI~Hq 80 (795)
|||+++++|+||++|||.+||||||||||++|.+++++++..|+.+||+||+|||.|++|++++|+||+|+|||+|||||
T Consensus 142 mr~a~~~~g~dp~~inp~vPvdlviDHsvqvd~~g~~~a~~~n~~~e~~rN~Ery~flkw~~~af~~~~vvpPG~GI~HQ 221 (936)
T PLN00070 142 MRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQ 221 (936)
T ss_pred HHHHHHHcCCCccccCCCCCcceEecCceeecccCCcCHHHHHHHHHHHHhHHHhChhhhhhhhhcCccccCCCCceEee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccccceeccCCCcccCCeEEecCCCcCCcCccccccccccHHHHHHHHccCceeecCCceEEEEEecccCCCcchhh
Q 003797 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATD 160 (795)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~l~G~l~~gVtakD 160 (795)
|++||||++|+.++|+++|+++|||||||||+||||+|||||||+|++++|+|||+||++||||+|+|+|+|++||||||
T Consensus 222 V~lE~la~~v~~~~G~~~PdtlVGtDSHT~~~GglG~lg~GVGg~EaeaaMlgqp~~~~vPevvgV~LtG~L~~GVtAKD 301 (936)
T PLN00070 222 VNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATD 301 (936)
T ss_pred echhhhcccccccCCcccCCeEEeCCcccCCCCcccccEecccHHHHHHHHhCCeEEeeCCCEEEEEEEeecCCCCCHhH
Confidence 99999999999778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCCCCCCChhhhhhhhccccccCCceeeecCCHHHHHHHhhcCCChhHHHHHHHHHHH
Q 003797 161 LVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240 (795)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~Ls~~~R~TI~NMa~E~GA~~~~fp~D~~t~~YL~~~gr~~~~~~~~~~y~~~ 240 (795)
|||+|+++||++|++||+|||+|||+++||+++|||||||++|+|||+||||+|++|++||+.|||++++++++++|+|+
T Consensus 302 liL~i~~~Lr~~GvvGk~VEF~G~Gv~~LSv~dRaTIaNMa~E~GAt~g~FP~De~T~~YL~~tgR~~~~~~~v~~y~k~ 381 (936)
T PLN00070 302 LVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRA 381 (936)
T ss_pred HHHHHHHHhCcCccceEEEEEeCCccccCCHhHHhhHhhcchhhCceeeEecCChHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCcccEEEEEECCCcccceecCCCCCCccccCccchhhhhhhcccccCCCCCCCccccccceeeecCC
Q 003797 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHG 320 (795)
Q Consensus 241 ~~l~~~~~~~D~~a~Y~~vieiDLs~leP~vA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 320 (795)
|+||++...+|++|.|+++++||||+|+|+||||++|||++||++++++|.+++.++.+.+++..+.++.....+++++|
T Consensus 382 ~~l~~~~~~~D~da~Y~~vieiDLs~veP~VAgP~~P~~~v~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 461 (936)
T PLN00070 382 NKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKEAQSKVAKFSFHG 461 (936)
T ss_pred ccccccccCCCCCCceeEEEEEEcccceEecCCCcChhcCcCHHHhhhhHHHhhcccccccccccchhhhhhhhhhhccC
Confidence 99999765678999999999999999999999999999999999999999888876554444433323323334566899
Q ss_pred CcccccCccEEEEEeecCCCCCChHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcChHHHHHhcCcEEe
Q 003797 321 QPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIV 400 (795)
Q Consensus 321 ~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aGa~i~ 400 (795)
+++.+++|+|++|||||||||||||+|+||++|||||+++|+||+||||++|+|||++|++||+++||+++|+++||+|+
T Consensus 462 ~~~~l~~g~V~ia~IgSCTNts~~dl~~aA~lLakkA~~~Glkv~p~Vk~~vaPGS~~V~~~l~~~Gl~~~L~~aGf~v~ 541 (936)
T PLN00070 462 QPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIV 541 (936)
T ss_pred CCCCcccCCEeEEEEECCCCCCcHHHHHHHHHHHHHHHhcCCccCCCccEEEeCCCHHHHHHHHHCCcHHHHHHcCCEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCCCCChhhhccccCCceeEEEEeccCCCCCCCCCCccCCccccCHHHHHHHHHhCccccCCCCCCCccCC
Q 003797 401 GYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480 (795)
Q Consensus 401 ~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vss~NRNF~GR~g~~~~~~yLaSP~~vaA~AlaG~I~~d~~~~plg~~~ 480 (795)
+||||+|+||++++.++++++|.+|+++++||||+||||+||||+..+++|||||++||||||+|+|++|+++||+|+++
T Consensus 542 ~~GCg~CIG~~g~l~~~~~~~i~~~~l~~~~VsS~NRNFeGR~gp~~~~~yLaSP~lVaA~AlaG~i~~d~~~dplg~~~ 621 (936)
T PLN00070 542 GYGCTTCIGNSGELDESVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGK 621 (936)
T ss_pred CCccccccCCCCCCCchhhhccccCCeeEEEEeccCCCCCCCCCCCCCceEEcCHHHHHHHHHcCCcccCCCCCCCccCC
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeccccCCCChHHHHHHhhccCCccccccccccccCCCCCcccccCCCCCccccCCCCcccCCCCCCCcCCCCCCCC
Q 003797 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGA 560 (795)
Q Consensus 481 ~G~~v~l~di~P~~~ei~~~~~~~~~p~~~~~~~~~~~~~~~~w~~l~~~~~~~~~w~~~st~i~~pp~~~~~~~~~~~~ 560 (795)
+|++|||+||||+.+|+++++...++|++|.+.|++++.+++.|++|+.|.+..|+||++||||++||||++++..++++
T Consensus 622 ~G~~v~l~diwP~~~ei~~~~~~~v~~~~f~~~y~~~~~g~~~w~~l~~p~~~~~~wd~~Styi~~pp~f~~~~~~~~~~ 701 (936)
T PLN00070 622 DGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPKSTYIHEPPYFKNMTMSPPGP 701 (936)
T ss_pred CCCEecccCCCCChHHHHHHHHccCCHHHhhhhhhhccCCccccccCCCCCCCcccCCCCcceeecCCCCCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred CCcccceEEeecCCCCCcCccccCCCCCCCChHhhHHHHcCCCcccccccccCCCChhhhccccccchhhhhhhcCCCCC
Q 003797 561 HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVG 640 (795)
Q Consensus 561 ~~i~~~~vL~~~gd~itTD~I~PAG~i~~~s~a~~~L~~~g~~~~~~n~yg~rr~n~evm~rg~F~n~r~~n~~~~~~~g 640 (795)
.+|+++|||+++||+||||||||||+|+++||||+||+++|+.++|||+||+||||||||+||||+|+|++|+|+++.+|
T Consensus 702 ~~i~~arvL~~lgD~iTTDHISPAG~i~~~spag~yL~~~gv~~~dfnsygsrRgN~evm~rgtFaNir~~N~~~~g~~g 781 (936)
T PLN00070 702 HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVG 781 (936)
T ss_pred cCccCcEEEEEECCCCcccccCCCCCCCCCChHHHHHHhcCCChhhccccccccCcchhhhceeccchhhhhhhcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCccccccchHHHHHHcCCCcEEEeCCccCCCCchhhhhhchhhcCeeEEEecchhHHhhhhhccCccccccc
Q 003797 641 PKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720 (795)
Q Consensus 641 ~~t~~~p~~~~~~v~~~A~~y~~~~~~~iiVaG~NfG~GSSRE~Aa~a~~~lGv~aVIA~SFarI~~~Nlin~Gilpl~~ 720 (795)
++|+|+|+|+.++|||+|++|+++|+|+|||||+|||||||||||||++++||||||||+||+||||+||+|||||||+|
T Consensus 782 ~~t~~~p~g~~~~i~daA~~Y~~~g~p~iIvaG~nyG~GSSRe~AA~~~~~lGvkaVIA~SF~rIhrsNli~~GiLPL~f 861 (936)
T PLN00070 782 PKTVHIPTGEKLSVFDAAMKYKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 861 (936)
T ss_pred CeeEecCCCceeeHHHHHHHHHhcCCceEEEccCccCCCCcHHHHHHHHHHhCCcEEEEccHHHHHHhhhhhcCcceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccchhhccCCCCeEEEEecCCccccCCCCceEEEEcCCCeEEEEEecCCCHHHHHHHHhcChHHHHHHHhhcC
Q 003797 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLIKQ 795 (795)
Q Consensus 721 ~~~~~~~~l~~~~~~~~~idl~~~~~~~~~g~~v~v~~~~g~~~~~~~~~~t~~e~~~~~aGGll~~v~~~~~~~ 795 (795)
.++++++.+++.+++.++|++.+++.+++||++++++..+|++|.++++++|+.|++||++||+||||+|++++|
T Consensus 862 ~~~~~~~~l~~~g~~~~~i~l~~~~~~l~p~~~~~v~~~~g~~~~~~~r~dt~~E~~~~~~GGiL~~v~r~~~~~ 936 (936)
T PLN00070 862 KSGEDADTLGLTGHERYTIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYFDHGGILPYVIRNLIKQ 936 (936)
T ss_pred CCcccHHHHhcCCCceEEEeccccccccCCCCEEEEEeCCCeEEEEEEeCCCHHHHHHHHcCCHHHHHHHHHhhC
Confidence 999999999988889999998776667999998888777889999999999999999999999999999999876
|
|
| >PTZ00092 aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR01341 aconitase_1 aconitate hydratase 1 | Back alignment and domain information |
|---|
| >PRK12881 acnA aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >PRK09277 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >COG1048 AcnA Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01340 aconitase_mito aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >PRK07229 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >TIGR00139 h_aconitase homoaconitase | Back alignment and domain information |
|---|
| >PRK11413 putative hydratase; Provisional | Back alignment and domain information |
|---|
| >KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01586 AcnA_IRP Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK12466 isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05478 isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01343 hacA_fam homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >cd01580 AcnA_IRP_Swivel Aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02084 leud 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK14023 homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK01641 leuD isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain | Back alignment and domain information |
|---|
| >cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >cd00404 Aconitase_swivel Aconitase swivel domain | Back alignment and domain information |
|---|
| >cd01674 Homoaconitase_Swivel Homoaconitase swivel domain | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >cd01576 AcnB_Swivel Aconitase B swivel domain | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PRK14812 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG1679 Predicted aconitase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01355 AcnX Putative Aconitase X catalytic domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 795 | ||||
| 3snp_A | 908 | Crystal Structure Analysis Of Iron Regulatory Prote | 0.0 | ||
| 2b3x_A | 888 | Structure Of An Orthorhombic Crystal Form Of Human | 0.0 | ||
| 1aco_A | 754 | Crystal Structure Of Aconitase With Transaconitate | 1e-50 | ||
| 1ami_A | 754 | Steric And Conformational Features Of The Aconitase | 1e-50 | ||
| 5acn_A | 754 | Structure Of Activated Aconitase. Formation Of The | 3e-50 | ||
| 1nis_A | 754 | Crystal Structure Of Aconitase With Trans-Aconitate | 3e-50 | ||
| 1c96_A | 753 | S642a:citrate Complex Of Aconitase Length = 753 | 3e-50 | ||
| 1c97_A | 753 | S642a:isocitrate Complex Of Aconitase Length = 753 | 6e-50 | ||
| 1b0j_A | 754 | Crystal Structure Of Aconitase With Isocitrate Leng | 6e-50 | ||
| 1b0m_A | 753 | Aconitase R644q:fluorocitrate Complex Length = 753 | 1e-49 | ||
| 2pkp_A | 170 | Crystal Structure Of 3-Isopropylmalate Dehydratase | 9e-08 | ||
| 1v7l_A | 163 | Structure Of 3-Isopropylmalate Isomerase Small Subu | 9e-05 | ||
| 2hcu_A | 213 | Crystal Structure Of Smu.1381 (Or Leud) From Strept | 3e-04 |
| >pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 | Back alignment and structure |
|
| >pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 | Back alignment and structure |
| >pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 | Back alignment and structure |
| >pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 | Back alignment and structure |
| >pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 | Back alignment and structure |
| >pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 | Back alignment and structure |
| >pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 | Back alignment and structure |
| >pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 | Back alignment and structure |
| >pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud) From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271) Length = 170 | Back alignment and structure |
| >pdb|1V7L|A Chain A, Structure Of 3-Isopropylmalate Isomerase Small Subunit From Pyrococcus Horikoshii Length = 163 | Back alignment and structure |
| >pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus Mutans Length = 213 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 | Back alignment and structure |
|---|
Score = 1584 bits (4104), Expect = 0.0
Identities = 489/794 (61%), Positives = 609/794 (76%), Gaps = 4/794 (0%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDA+ KLG D KINP+ P DLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKW
Sbjct: 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS AFHNM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GW
Sbjct: 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGW 218
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
GVGGIEAEA MLGQP+SMVLP V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVE
Sbjct: 219 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 278
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F G G+ +LS+ADRATIANM PEYGAT FFPVD V++ YL TGR +E + ++ YL+A
Sbjct: 279 FFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
MF D+N+P Q+ ++ +EL+L V PC SGPKRP D+V + +MK D+ SCL K GF
Sbjct: 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGF V E F + L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA +
Sbjct: 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDA 458
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GL V P++KTSL+PGSGVVT YL +SG+ YL++ GF +VGYGC TCIGNSG L E V
Sbjct: 459 GLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVE 518
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+G
Sbjct: 519 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
G+ V+ KDIWPT +EI V + V+P MFK Y+ I N +WN L+ P+ KL+ W+
Sbjct: 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSK 638
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYI PP+F+++T+D + DAY LLN GDS+TTDHISPAG+I ++SP A+YL R
Sbjct: 639 STYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNR 698
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
G+ R+FNSYGSRRGND VMARGTFANIRL+N+ LN + P+T+H+P+GE L VFDAA +
Sbjct: 699 GLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAER 757
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+ AG I+LAG EYG+GSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL +
Sbjct: 758 YQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEY 817
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
GE+AD+LGLTG ER++I +P ++P V V D+GK+F +RFDT+VEL YF
Sbjct: 818 LPGENADALGLTGQERYTIIIP---ENLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFL 874
Query: 781 HGGILPFVIRNLIK 794
+GGIL ++IR + K
Sbjct: 875 NGGILNYMIRKMAK 888
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Length = 170 | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Length = 213 | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Length = 171 | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Length = 203 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 795 | |||
| 2b3y_A | 888 | Iron-responsive element binding protein 1; IRP1 IR | 100.0 | |
| 1c96_A | 753 | Mitochondrial aconitase; lyase, tricarboxylic acid | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 2pkp_A | 170 | Homoaconitase small subunit; beta barrel, amino-ac | 100.0 | |
| 2hcu_A | 213 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 1v7l_A | 163 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 3vba_A | 176 | Isopropylmalate/citramalate isomerase small subun; | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 3q3w_A | 203 | 3-isopropylmalate dehydratase small subunit; struc | 100.0 | |
| 3h5j_A | 171 | 3-isopropylmalate dehydratase small subunit; leuci | 100.0 |
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-221 Score=1930.79 Aligned_cols=789 Identities=62% Similarity=1.069 Sum_probs=748.5
Q ss_pred ChHHHHhcCCCCCccCCCCceEEEecccccCCCCCchhHHHHHHHHHHHHhhhhhhhhhhhccccCcceeeCCCCceecc
Q 003797 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQ 80 (795)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~lviDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~f~~~~~~~pg~GI~Hq 80 (795)
||++++++|.||+++||.+|+++++||+||++..+..++..+|+.++|+||+|+|+||+|++++|.+|+|+|||+|||||
T Consensus 99 mr~a~~~~g~d~~ki~p~~pv~lv~DH~v~~~~~~~~da~~~n~~~e~~rN~e~~~fL~w~~~~f~~~~~~~pG~GI~Hq 178 (888)
T 2b3y_A 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQ 178 (888)
T ss_dssp HHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHH
T ss_pred HHHHHHhcCCChhhcCCCCCeeEEeCCCCCcCCccccCHHHHHHHHHHHHhcchHHHHHHHHHhccCCCCCCCCCCCcce
Confidence 68899999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred chhccccceeccCCCcccCCeEEecCCCcCCcCccccccccccHHHHHHHHccCceeecCCceEEEEEecccCCCcchhh
Q 003797 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATD 160 (795)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~l~G~l~~gVtakD 160 (795)
|++||||++|+.++|+++|+|||||||||||+||||+||||||++|++++|+||++||++||+|+|+|+|+|++||||||
T Consensus 179 v~lE~la~~v~~~~G~~~P~tlVGtDSHT~t~GglG~la~GVGg~eae~~mag~~~~~~~PevvgV~ltG~L~~gVtakD 258 (888)
T 2b3y_A 179 VNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTD 258 (888)
T ss_dssp HHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHH
T ss_pred ehhhhccccccccCcccccCeEEecCCCccccCcceeEEEccCHHHHHHHHhcCcEeecCCCEEEEEEEccCCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCCCCCCChhhhhhhhccccccCCceeeecCCHHHHHHHhhcCCChhHHHHHHHHHHH
Q 003797 161 LVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240 (795)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~Ls~~~R~TI~NMa~E~GA~~~~fp~D~~t~~YL~~~gr~~~~~~~~~~y~~~ 240 (795)
|||+|+++|+++|++||+|||+||||++||+++|||||||++|+|||+|+||+|++|++||+.+||++++++++++|+++
T Consensus 259 viL~i~~~l~~~G~vGk~vEF~G~gv~~LS~~~R~TI~NMa~E~GAt~g~fp~De~T~~YL~~~gr~~~~~~~~e~y~~a 338 (888)
T 2b3y_A 259 IVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338 (888)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCccceEEEEecCccccccccchhhhhhcchhhCCeeEEecCcHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred hhhcccCCCCC-CCCcccEEEEEECCCcccceecCCCCCCccccCccchhhhhhhcccccCCCCCCCccccccceeeecC
Q 003797 241 NKMFVDYNEPQ-QERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH 319 (795)
Q Consensus 241 ~~l~~~~~~~D-~~a~Y~~vieiDLs~leP~vA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (795)
+++|++. .+| ++|.|+++++||||+|+|+||||++|||++||++++++|.+++..+++.+|+..+.+...+.++++|+
T Consensus 339 ~~l~~~l-~~d~~dA~Yd~~ieiDLs~leP~VAgP~~P~~~~plse~~~~~~~~l~~~~g~~g~~~~~~~~~~~~~~~~~ 417 (888)
T 2b3y_A 339 VGMFRDF-NDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYD 417 (888)
T ss_dssp HTCCCCT-TCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEET
T ss_pred HHHHhcc-CCCCCCCceEEEEEEEhhheeEeecCCCCcccccChHHhhhhHHHhhhcccccccccccchhhcccceeecC
Confidence 9999753 234 89999999999999999999999999999999999998887776543333321110110012446788
Q ss_pred CCcccccCccEEEEEeecCCCCCChHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcChHHHHHhcCcEE
Q 003797 320 GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHI 399 (795)
Q Consensus 320 g~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aGa~i 399 (795)
|+++.|.||+|++|||||||||||+|+|+||++|||+|+++|+||+||||++|+|||++|++||+++||+++|+++||.|
T Consensus 418 g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLak~A~~kG~kv~p~Vk~~v~PGS~~V~~~l~~~Gl~~~l~~aGf~i 497 (888)
T 2b3y_A 418 NTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDV 497 (888)
T ss_dssp TEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHHHHHHTTCCB
T ss_pred CccccccCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCceEEEeCCCHHHHHHHHHcCcHHHHHHcCCEE
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCccccCCCCCCChhhhccccCCceeEEEEeccCCCCCCCCCCccCCccccCHHHHHHHHHhCccccCCCCCCCccC
Q 003797 400 VGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTT 479 (795)
Q Consensus 400 ~~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vss~NRNF~GR~g~~~~~~yLaSP~~vaA~AlaG~I~~d~~~~plg~~ 479 (795)
++||||+|+||++++.++++.+|.+||+++++|||+||||+||||+..+++|||||+|||||||+|+|++|+++||+|.+
T Consensus 498 ~~~GC~~CiG~~~~l~~~~~~~i~~ge~~~~~vsS~NRNFeGR~g~~~~~~yLaSP~lvaA~AiaG~i~~d~~~dpl~~~ 577 (888)
T 2b3y_A 498 VGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVN 577 (888)
T ss_dssp CCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSCCCTTTSCSEEE
T ss_pred eCCCCcceeCCCCCCCchhhhhhccCCeeEEEEeccCCCcCcCCCCCccccEecCHHHHHHHHhcCeeecccccCccccC
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeccccCCCChHHHHHHhhccCCccccccccccccCCCCCcccccCCCCCccccCCCCcccCCCCCCCcCCCCCCC
Q 003797 480 KDGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPG 559 (795)
Q Consensus 480 ~~G~~v~l~di~P~~~ei~~~~~~~~~p~~~~~~~~~~~~~~~~w~~l~~~~~~~~~w~~~st~i~~pp~~~~~~~~~~~ 559 (795)
++|+++||+||||+.+|+++++...+++++|.+.|..++.+++.|+.++++.++.|+|+++||||++||||+.++..+++
T Consensus 578 ~~G~~v~l~diwP~~~ei~~~~~~~~~~~~f~~~y~~~~~~~~~~~~~~~~~~~~~~w~~~St~i~~~p~f~~~~~~~~~ 657 (888)
T 2b3y_A 578 AKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQP 657 (888)
T ss_dssp TTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCCCSSCCCCTTCSSCCCCGGGTTCCSSCCC
T ss_pred CCCCcccccccCCchhhhHHHHHhcCCHHHhhhhhccccCCccccccCCCCCCCccccCCCcccccCCCCccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCcccceEEeecCCCCCcCccccCCCCCCCChHhhHHHHcCCCcccccccccCCCChhhhccccccchhhhhhhcCCCC
Q 003797 560 AHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEV 639 (795)
Q Consensus 560 ~~~i~~~~vL~~~gd~itTD~I~PAG~i~~~s~a~~~L~~~g~~~~~~n~yg~rr~n~evm~rg~F~n~r~~n~~~~~~~ 639 (795)
++++.++++|+++|||||||||||||+|+++||||+||+++|+++++|||||+||||||||+||+|+|+|+.|+|.+ .+
T Consensus 658 ~~~~~~~~~l~~~gdnitTDhIsPAg~i~~~s~ag~~L~~~gv~~~~f~syg~rRgn~~vm~rg~F~n~r~~n~l~~-~~ 736 (888)
T 2b3y_A 658 PKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLN-KQ 736 (888)
T ss_dssp CCCEEEEEEEEEBCSCCBHHHHSCCSCCCSSSHHHHHHHHTTCCGGGCCCTGGGTTCHHHHHHTTTCCTTCEETTTT-EE
T ss_pred cccccCcEEEEEecCCccccccccCccccCCCHHHHHHHhcCCChHHhccccccccCHHHHhhhccccccccccccc-cc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999986 89
Q ss_pred CCcccccCCCccccccchHHHHHHcCCCcEEEeCCccCCCCchhhhhhchhhcCeeEEEecchhHHhhhhhccCcccccc
Q 003797 640 GPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLC 719 (795)
Q Consensus 640 g~~t~~~p~~~~~~v~~~A~~y~~~~~~~iiVaG~NfG~GSSRE~Aa~a~~~lGv~aVIA~SFarI~~~Nlin~Gilpl~ 719 (795)
|++|+++|+|+.+++||+|++|+++|.++|||||+|||||||||||+|+++++||+||||+||+||||+||+|||||||+
T Consensus 737 g~~t~~~p~g~~~~~~d~a~~y~~~g~~~iivaG~nfG~GSSREhAa~a~~~~Gi~aVIA~SFarIf~~Nli~~Gllpl~ 816 (888)
T 2b3y_A 737 APQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLE 816 (888)
T ss_dssp CSEEEETTTTEEEEHHHHHHHHHHTTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCHHHHHHHHHHTCEEEE
T ss_pred CCceeecCCCccccchhhHHHHHhcCCceEEECCCCCCCCccHHHHHHHHHHcCeeEEEEhhHHHHHHhhhhhcCCceEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccchhhccCCCCeEEEEecCCccccCCCCceEEEEcCCCeEEEEEecCCCHHHHHHHHhcChHHHHHHHhhc
Q 003797 720 FKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLIK 794 (795)
Q Consensus 720 ~~~~~~~~~l~~~~~~~~~idl~~~~~~~~~g~~v~v~~~~g~~~~~~~~~~t~~e~~~~~aGGll~~v~~~~~~ 794 (795)
|+++++++.+.+.++++++|++.+ .++||+.+++...+|++|.++++++++.|++|+++||+|||+++++++
T Consensus 817 ~~~~~~~~~~~~~~~~~i~i~l~~---~~~~g~~v~v~~~~G~~~~~~~~~~t~~e~~~~~aGGiL~yv~~~~~~ 888 (888)
T 2b3y_A 817 YLPGENADALGLTGQERYTIIIPE---NLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKMAK 888 (888)
T ss_dssp ECTTCCHHHHTCCSCSCEEECCCS---SCCTTCEEEEEETTSCEEEEEECCCSHHHHHHHHHTSHHHHHHHHHHC
T ss_pred ecccccHHHhccCCCceEEEEccc---ccCCCcEEEEEeCCCeEEEEEecCCCHHHHHHHHcCCHHHHHHHHhhC
Confidence 999999998888888999999764 488998776644678999999999999999999999999999999863
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 | Back alignment and structure |
|---|
| >3vba_A Isopropylmalate/citramalate isomerase small subun; lyase, LEUD, cytosol; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 795 | ||||
| d2b3ya2 | 629 | c.83.1.1 (A:2-630) Iron-responsive element binding | 0.0 | |
| d1acoa2 | 527 | c.83.1.1 (A:2-528) Aconitase A, N-terminal domain | 1e-102 | |
| d2b3ya1 | 259 | c.8.2.1 (A:631-889) ron-responsive element binding | 7e-97 | |
| d1l5ja3 | 490 | c.83.1.1 (A:373-862) Aconitase B, C-terminal domai | 6e-64 | |
| d1acoa1 | 226 | c.8.2.1 (A:529-754) Aconitase A, C-terminal domain | 2e-54 | |
| d1v7la_ | 162 | c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc | 3e-24 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 595 bits (1535), Expect = 0.0
Identities = 332/531 (62%), Positives = 405/531 (76%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDA+ KLG D KINP+ P DLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKW
Sbjct: 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGW 120
GS AFHNM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GW
Sbjct: 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGW 218
Query: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
GVGGIEAEA MLGQP+SMVLP V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVE
Sbjct: 219 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 278
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F G G+ +LS+ADRATIANM PEYGAT FFPVD V++ YL TGR +E + ++ YL+A
Sbjct: 279 FFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
MF D+N+P Q+ ++ +EL+L V PC SGPKRP D+V + +MK D+ SCL K GF
Sbjct: 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGF V E F + L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA +
Sbjct: 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDA 458
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GL V P++KTSL+PGSGVVT YL +SG+ YL++ GF +VGYGC TCIGNSG L E V
Sbjct: 459 GLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVE 518
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+G
Sbjct: 519 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPA 531
G+ V+ KDIWPT +EI V + V+P MFK Y+ I N +WN L+ P+
Sbjct: 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 795 | |||
| d2b3ya2 | 629 | Iron-responsive element binding protein 1, N-termi | 100.0 | |
| d1acoa2 | 527 | Aconitase A, N-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1l5ja3 | 490 | Aconitase B, C-terminal domain {Escherichia coli [ | 100.0 | |
| d2b3ya1 | 259 | ron-responsive element binding protein 1, C-termin | 100.0 | |
| d1acoa1 | 226 | Aconitase A, C-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1v7la_ | 162 | Isopropylmalate isomerase LeuD {Pyrococcus horikos | 100.0 | |
| d1l5ja2 | 212 | Aconitase B, second N-terminal domain {Escherichia | 97.16 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-160 Score=1366.21 Aligned_cols=531 Identities=63% Similarity=1.071 Sum_probs=515.2
Q ss_pred ChHHHHhcCCCCCccCCCCceEEEecccccCCCCCchhHHHHHHHHHHHHhhhhhhhhhhhccccCcceeeCCCCceecc
Q 003797 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQ 80 (795)
Q Consensus 1 ~r~~~~~~g~~~~~~~P~~pv~lviDH~v~~~~~~~~~a~~~n~~~e~~rn~e~~~fl~~~~~~f~~~~~~~pg~GI~Hq 80 (795)
|||+++++|+||.+|||.+||+|||||+||++..+++++++.|+.+||+||.|||+||||++++|+||+|+|||+|||||
T Consensus 99 mrda~~~~g~dp~~i~p~~p~~lviDHsv~~~~~~~~~~~~~n~~~e~~rn~er~~fl~w~~~~~~~~~~~pPg~GI~HQ 178 (629)
T d2b3ya2 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQ 178 (629)
T ss_dssp HHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHH
T ss_pred HHHHHHHhCCCccccCCCCcceEEECCCeEeccCCCchhhhhchhhhhhhhHHHHHHHHHHHHHhhcccccccccchhhH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccccceeccCCCcccCCeEEecCCCcCCcCccccccccccHHHHHHHHccCceeecCCceEEEEEecccCCCcchhh
Q 003797 81 VNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATD 160 (795)
Q Consensus 81 v~~E~~a~~v~~~~G~~~P~~vvGtDSHT~~~GalG~la~GvGg~e~~~~m~g~~~~~~vPevv~V~l~G~l~~gVtakD 160 (795)
||+||||++|+.++|+++||++|||||||||+||||+|||||||+|++++|+||++||++||||+|+|+|+|++||||||
T Consensus 179 vnlE~la~~v~~~~~~~~pdtlVGtDSHT~~~GalG~lg~GVGg~Eae~amlg~~~~~~vPevvgv~L~G~L~~gVtakD 258 (629)
T d2b3ya2 179 VNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTD 258 (629)
T ss_dssp HHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHH
T ss_pred HHHHHhcccccCCCCeEEeeeEEecCCCccccccccceecCcchHHHHHHHhCCcEEEecCceEEEEEEeccCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccceEEEEecCCCCCCChhhhhhhhccccccCCceeeecCCHHHHHHHhhcCCChhHHHHHHHHHHH
Q 003797 161 LVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240 (795)
Q Consensus 161 viL~i~~~l~~~G~~g~~vEf~G~gv~~Ls~~~R~TI~NMa~E~GA~~~~fp~D~~t~~YL~~~gr~~~~~~~~~~y~~~ 240 (795)
|||+|+++||++|++||+|||+|||+++||+++|||||||++|+|||+||||+|++|++||+.+||+++.++++++|.++
T Consensus 259 liL~i~~~L~~~G~vgk~VEF~G~gi~~LS~~dRaTI~NMa~E~GAt~gifp~De~T~~YL~~tgR~~~~~~~ve~y~~a 338 (629)
T d2b3ya2 259 IVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338 (629)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCcceEEEEeccccccccCHHHhhhhhhcccccCceEEEEccccchhhhhhhhcccccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCcccEEEEEECCCcccceecCCCCCCccccCccchhhhhhhcccccCCCCCCCccccccceeeecCC
Q 003797 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHG 320 (795)
Q Consensus 241 ~~l~~~~~~~D~~a~Y~~vieiDLs~leP~vA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 320 (795)
|++|++...+|++|.|+++++||||+|+|+||+|++|||++||+|++.+|.+++..+.+.+++..+++.......+.+++
T Consensus 339 ~~l~~~~~~~d~da~Y~~vieiDLs~veP~VAgP~~P~d~v~l~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (629)
T d2b3ya2 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDN 418 (629)
T ss_dssp HTCCCCTTCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEETT
T ss_pred HHhhhhccccccccCcceEEEEehhHceeecCCCCCccceeECCccCcChhhhhhhhhhhcccchhhhhhhhhhhhhhcc
Confidence 99999876678899999999999999999999999999999999999999999988777767666555555555566788
Q ss_pred CcccccCccEEEEEeecCCCCCChHHHHHHHHHHHHHHhCCCccCCceeEEEecCCHHHHHHHHHcChHHHHHhcCcEEe
Q 003797 321 QPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIV 400 (795)
Q Consensus 321 ~~~~l~~g~V~~a~IGSCTN~~~~dl~~aA~lLa~~A~~~G~kv~~~V~~~v~PgS~~V~~~l~~~Gl~~~l~~aGa~i~ 400 (795)
..+.+.+|+|++|||||||||||||+|+||++||++|+++|++++||||++|+|||++|++||+++||+++|+++||+|+
T Consensus 419 ~~~~l~~g~V~ia~IgSCTN~s~~dl~~AA~lLa~kaV~~Gl~v~p~Vk~~v~PGS~~V~~~le~~Gl~~~L~~aGf~i~ 498 (629)
T d2b3ya2 419 TEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVV 498 (629)
T ss_dssp EEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHHHHHHTTCCBC
T ss_pred ccccccCCcEEEEEEecCCCCCcHHHHHHHHHHhhhhhhcCCcccceeeEEEeccchhhhHHHHhCCchhhhhhceeEEe
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCCCCChhhhccccCCceeEEEEeccCCCCCCCCCCccCCccccCHHHHHHHHHhCccccCCCCCCCccCC
Q 003797 401 GYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480 (795)
Q Consensus 401 ~~gCg~CiG~~g~l~~~~~~~i~~~~~~~~~vss~NRNF~GR~g~~~~~~yLaSP~~vaA~AlaG~I~~d~~~~plg~~~ 480 (795)
+|||++|+||+|+++++++++|.+|++++++|||+||||+||||+..+++|||||+|||||||+|+|++|+.+||+|+|+
T Consensus 499 ~~GC~~CiGnsGpl~~~~~~~i~~gdl~~~~V~S~NRNFeGR~g~~~~~~yLaSP~lVaA~AiaG~I~id~~~eplg~~~ 578 (629)
T d2b3ya2 499 GYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578 (629)
T ss_dssp CSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSCCCTTTSCSEEET
T ss_pred cccccccCCCCCCCCcchhhhcccCCeeEeeecccCCCCCcCCCCCCCCeEECCHHHHHHHHhceeeecCCCcCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeccccCCCChHHHHHHhhccCCccccccccccccCCCCCcccccCCC
Q 003797 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPA 531 (795)
Q Consensus 481 ~G~~v~l~di~P~~~ei~~~~~~~~~p~~~~~~~~~~~~~~~~w~~l~~~~ 531 (795)
+|++|||+||||+.+||++++.+.++|++|++.|++++.++++|++|++|+
T Consensus 579 ~G~~V~L~diwPs~~Ei~~~~~~~v~~~~f~~~y~~v~~g~~~W~~l~~p~ 629 (629)
T d2b3ya2 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629 (629)
T ss_dssp TTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCC
T ss_pred CCCEEecCCCCCCHHHHHHHHHhccChhhhHHHHHHhccCChhhccCCCCC
Confidence 999999999999999999999999999999999999999999999998773
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|