Citrus Sinensis ID: 003852

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
ccccccccccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHccEEEccccccHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEEcccHHEcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccEEEEEEccEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEc
cccEEEEccccccccccEEcccccccccccHHHccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
maarveidednetnkgsMWVLdqkldqpmdEEAGRLRNMYREKFSSLLLLRFAFQSLGVvygdlgtsplyvfyntfphgiddpeDIIGALSLIIYSLTLIPLLKYVFIVCrandsgqggtFALYSLLCRHAkvitipnqhrtdeelttysrstfhEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLsasggikvdhphmsnGVVVLVAVVILVGLFSlqhygtdrvgwLFAPIVLLWFLLIGGIGMLNIWKYDssvlkafspvYIYRYFrrggrdgwtslGGIMLSITGTEALFADlahfpvsaIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYrsipdsiywpVFIVATAAAIVASQATISATFSIIKQALAlgcfprvkvvhtskkflgqiyipdiNWILMILCIAVTagfknqsqignaYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFkvdqggwvPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILglgpslglvrvpgiGLVYTElasgvphifshfitnlpaiHSVVVFVCVkylpvytvpeeerflvkrigpknfhmFRCVArygykdlhkkdeNFEKKLFDSLFLFVRLEAMmegcsdsdeyslygqqtlqstdgllnnngnstssnqdltmssvdsivpvksplhvnstvmsssqmsshtetdELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICREnsvifnvphesllnvgqifyv
maarveidednetnkgsmwvldqkldqPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVitipnqhrtdeelttysrstfheKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPvytvpeeerflvkrigpknfhMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTvvrasrgskfyKKIAIDYIYAFLRKICRENSVIfnvphesllnvgqifyv
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGvvvlvavvilvglFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFivataaaivasqatisatFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGtavvivmlattllmtlimilvWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQstdgllnnngnstssnQDLTMSSVDSIVPVKSPLHVNstvmsssqmssHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
************************************RNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSD***YSLY************************************************************LEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFY*
************************************************LLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRT************************LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEA****************************************************************************FLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
*************NKGSMWVLDQKLDQPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNS***************ELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
***********************KLDQPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME***************************************************HVNST**SSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
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MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query791 2.2.26 [Sep-21-2011]
O64769792 Potassium transporter 11 yes no 0.989 0.988 0.827 0.0
Q9SA05796 Potassium transporter 10 no no 0.994 0.988 0.811 0.0
Q8VXB1793 Putative potassium transp yes no 0.993 0.991 0.766 0.0
Q7XLC6791 Probable potassium transp yes no 0.992 0.992 0.775 0.0
Q653B6793 Potassium transporter 18 no no 0.992 0.989 0.737 0.0
O49423807 Potassium transporter 9 O no no 0.997 0.977 0.729 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.951 0.928 0.505 0.0
Q942X8783 Probable potassium transp no no 0.960 0.970 0.487 0.0
Q6H4R6877 Potassium transporter 23 no no 0.943 0.850 0.489 0.0
Q5ZC87808 Probable potassium transp no no 0.948 0.928 0.481 0.0
>sp|O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1 Back     alignment and function desciption
 Score = 1296 bits (3354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/800 (82%), Positives = 724/800 (90%), Gaps = 17/800 (2%)

Query: 1   MAARVE-------IDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREK-FSSLLLLRF 52
           MAARVE       IDE+    +GSMW LDQKLDQ MDEEAGRLRNMYREK FS+LLLL+ 
Sbjct: 1   MAARVEAATMGGEIDEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQL 60

Query: 53  AFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRA 112
           +FQSLGVVYGDLGTSPLYVFYNTFPHGI DPEDIIGALSLIIYSLTLIPLLKYVF+VC+A
Sbjct: 61  SFQSLGVVYGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKA 120

Query: 113 NDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTF 172
           ND+GQGGTFALYSLLCRHAKV TI NQHRTDEELTTYSR+TFHE SFAAKTKRWLE +T 
Sbjct: 121 NDNGQGGTFALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRTS 180

Query: 173 RKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFS 232
           RK ALL+LVLVGTCMVIGDGILTPAISVLSA+GG++V+ PH+SNGVVV VAVVILV LFS
Sbjct: 181 RKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLFS 240

Query: 233 LQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW 292
           +QHYGTDRVGWLFAPIV LWFL I  IGM NIWK+D+SVLKAFSPVYIYRYF+RGGRD W
Sbjct: 241 VQHYGTDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDRW 300

Query: 293 TSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVD 352
           TSLGGIMLSITG EALFADL+HFPVSA+QIAFTV+VFPCLLLAYSGQAAY+  + DHV D
Sbjct: 301 TSLGGIMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVAD 360

Query: 353 AFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLG 412
           AFYRSIP S+YWP+FI+ATAAAIVASQATISATFS++KQALA GCFPRVKVVHTS+KFLG
Sbjct: 361 AFYRSIPGSVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFLG 420

Query: 413 QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWI 472
           QIY+PDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVML TTLLMTLIMILVWRCHW+
Sbjct: 421 QIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHWV 480

Query: 473 LVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSK 532
           LVLIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAFL+IM+VWHYGT+KRYEFEMH +
Sbjct: 481 LVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCR 540

Query: 533 VSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPV 592
           VSMAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK LPV
Sbjct: 541 VSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLPV 600

Query: 593 YTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME- 651
           YTVPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD++FEK+LF+SLFL+VRLE+MME 
Sbjct: 601 YTVPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMMEG 660

Query: 652 GCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSS 711
           GCSDSD+YS+ G Q  Q  D L N N N   +  D T  S++SI PVK    V++TV +S
Sbjct: 661 GCSDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TFDSIESITPVK---RVSNTVTAS 715

Query: 712 SQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICREN 771
           SQMS     DELEF+N CRDAGVVHI+GNTVVRA R ++FYKKIAIDY+YAFLRKICRE+
Sbjct: 716 SQMSG---VDELEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICREH 772

Query: 772 SVIFNVPHESLLNVGQIFYV 791
           SVI+NVP ESLLNVGQIFYV
Sbjct: 773 SVIYNVPQESLLNVGQIFYV 792
Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SA05|POT10_ARATH Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2 Back     alignment and function description
>sp|Q8VXB1|HAK12_ORYSJ Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3 Back     alignment and function description
>sp|Q653B6|HAK18_ORYSJ Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1 Back     alignment and function description
>sp|O49423|POT9_ARATH Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZC87|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query791
359472756790 PREDICTED: potassium transporter 11-like 0.997 0.998 0.892 0.0
224125216792 predicted protein [Populus trichocarpa] 1.0 0.998 0.886 0.0
356528128791 PREDICTED: potassium transporter 11-like 0.998 0.998 0.867 0.0
356510798791 PREDICTED: potassium transporter 11-like 0.998 0.998 0.866 0.0
224071529792 predicted protein [Populus trichocarpa] 1.0 0.998 0.869 0.0
348161633790 potassium trasporter 1 [Amaranthus sp. L 0.989 0.991 0.849 0.0
449454772791 PREDICTED: potassium transporter 11-like 0.997 0.997 0.863 0.0
398025471803 putative potassium transporter KUP11, pa 0.994 0.980 0.835 0.0
297737993743 unnamed protein product [Vitis vinifera] 0.938 0.998 0.847 0.0
356556167790 PREDICTED: probable potassium transporte 0.996 0.997 0.835 0.0
>gi|359472756|ref|XP_002276261.2| PREDICTED: potassium transporter 11-like [Vitis vinifera] gi|147778418|emb|CAN60810.1| hypothetical protein VITISV_036657 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1429 bits (3700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/792 (89%), Positives = 755/792 (95%), Gaps = 3/792 (0%)

Query: 1   MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREK-FSSLLLLRFAFQSLGV 59
           MA+ +E +ED+E NKGSMWVLDQKLDQPMDEEAGRLRNMYREK FS++LLLR AFQSLGV
Sbjct: 1   MASGIEFEEDSE-NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSAVLLLRLAFQSLGV 59

Query: 60  VYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGG 119
           VYGDLGTSPLYVFYNTFP GI+DPED++GALSLIIYSLTLIPLLKY+F+VCRAND+GQGG
Sbjct: 60  VYGDLGTSPLYVFYNTFPRGIEDPEDVVGALSLIIYSLTLIPLLKYIFVVCRANDNGQGG 119

Query: 120 TFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLM 179
           TFALYSLLCRHAK+ TIPNQHRTDEELTTYSR+TFHE S+AAKTKRWLE    RKN LL+
Sbjct: 120 TFALYSLLCRHAKINTIPNQHRTDEELTTYSRTTFHEHSYAAKTKRWLEGHASRKNMLLI 179

Query: 180 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTD 239
           LVLVGTCM+IGDGILTPAISVLSA+GGIKVDHP MSN +VVLVAVVILVGLFS+QHYGTD
Sbjct: 180 LVLVGTCMLIGDGILTPAISVLSAAGGIKVDHPGMSNEIVVLVAVVILVGLFSMQHYGTD 239

Query: 240 RVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIM 299
           RVGWLFAPIVLLWFL+IGGIG+ NIWKYDSSVLKAFSPVYIYRYF+RGGRDGWTSLGGIM
Sbjct: 240 RVGWLFAPIVLLWFLVIGGIGIFNIWKYDSSVLKAFSPVYIYRYFKRGGRDGWTSLGGIM 299

Query: 300 LSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIP 359
           LSITGTEALFADLAHFPVSA+Q+AFTVVVFPCLLLAYSGQAAYL+ +QDHVVDAFYRSIP
Sbjct: 300 LSITGTEALFADLAHFPVSAVQLAFTVVVFPCLLLAYSGQAAYLVKNQDHVVDAFYRSIP 359

Query: 360 DSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 419
           DSIYWPVF+VATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI
Sbjct: 360 DSIYWPVFVVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 419

Query: 420 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTA 479
           NW+LM+LCIAVTAGFKNQSQIGNAYGTAVVIVMLATT LM LIM+LVWRCHW+LVLIFT 
Sbjct: 420 NWVLMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLATTFLMILIMLLVWRCHWLLVLIFTG 479

Query: 480 LSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWIL 539
           LSL VECTYFSAVLFKVDQGGWVPLVIAAAFL+IMYVWHYGTVKRYEFEMHSKVSMAWIL
Sbjct: 480 LSLAVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFEMHSKVSMAWIL 539

Query: 540 GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE 599
           GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE
Sbjct: 540 GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE 599

Query: 600 RFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEY 659
           RFLVKRIGPKNFHMFRCVARYGYKDLHKKD++FEKKLFD+LF+FVRLE+MMEGCSDSDEY
Sbjct: 600 RFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDNLFMFVRLESMMEGCSDSDEY 659

Query: 660 SLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTE 719
           SLYG QT QS D LLN+NGN+ SSN DLT+SSVDSIVPVKSPLH ++TV SS   S+ TE
Sbjct: 660 SLYG-QTEQSRDCLLNDNGNTNSSNLDLTISSVDSIVPVKSPLHASNTVTSSGHTSNQTE 718

Query: 720 TDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPH 779
            DELEF+N+CR AGVVHILGNTVVRA R S+FYKKIA+DYIYAFLRKICRENSVIFNVPH
Sbjct: 719 GDELEFMNNCRSAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPH 778

Query: 780 ESLLNVGQIFYV 791
           ESLLNVGQIFYV
Sbjct: 779 ESLLNVGQIFYV 790

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224125216|ref|XP_002329922.1| predicted protein [Populus trichocarpa] gi|222871159|gb|EEF08290.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356528128|ref|XP_003532657.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356510798|ref|XP_003524121.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|224071529|ref|XP_002303503.1| predicted protein [Populus trichocarpa] gi|222840935|gb|EEE78482.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|348161633|gb|AEP68018.1| potassium trasporter 1 [Amaranthus sp. LHY-2011] Back     alignment and taxonomy information
>gi|449454772|ref|XP_004145128.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] gi|449471385|ref|XP_004153294.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|398025471|gb|AFO70207.1| putative potassium transporter KUP11, partial [Alternanthera philoxeroides] Back     alignment and taxonomy information
>gi|297737993|emb|CBI27194.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356556167|ref|XP_003546398.1| PREDICTED: probable potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query791
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.989 0.987 0.751 0.0
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.989 0.983 0.743 0.0
TAIR|locus:2119812823 KUP9 "AT4G19960" [Arabidopsis 0.834 0.801 0.695 6.6e-255
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.785 0.787 0.492 1.4e-181
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.778 0.775 0.496 9.6e-174
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.954 0.912 0.434 1.8e-172
TAIR|locus:2045639712 KT1 "potassium transporter 1" 0.782 0.869 0.457 4.7e-172
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.958 0.970 0.456 5.6e-171
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.934 0.864 0.438 2.6e-169
TAIR|locus:2184722858 KUP7 "K+ uptake permease 7" [A 0.987 0.910 0.419 8.7e-166
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3112 (1100.5 bits), Expect = 0., P = 0.
 Identities = 602/801 (75%), Positives = 660/801 (82%)

Query:     1 MAARVE-------IDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREK-FSSLLLLRF 52
             MAARVE       IDE+    +GSMW LDQKLDQ MDEEAGRLRNMYREK FS+LLLL+ 
Sbjct:     1 MAARVEAATMGGEIDEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQL 60

Query:    53 AFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRA 112
             +FQSLGVVYGDLGTSPLYVFYNTFPHGI DPEDIIGALSLIIYSLTLIPLLKYVF+VC+A
Sbjct:    61 SFQSLGVVYGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKA 120

Query:   113 NDSGQG-GTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQT 171
             ND+GQG GTFALYSLLCRHAKV TI NQHRTDEELTTYSR+TFHE SFAAKTKRWLE +T
Sbjct:   121 NDNGQGSGTFALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRT 180

Query:   172 FRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGXXXXXXXXXXXXXF 231
              RK ALL+LVLVGTCMVIGDGILTPAISVLSA+GG++V+ PH+SNG             F
Sbjct:   181 SRKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLF 240

Query:   232 SLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDG 291
             S+QHYGTDRVGWLFAPIV LWFL I  IGM NIWK+D+SVLKAFSPVYIYRYF+RGGRD 
Sbjct:   241 SVQHYGTDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDR 300

Query:   292 WTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVV 351
             WTSLGGIMLSITG EALFADL+HFPVSA+QIAFTV+VFPCLLLAYSGQAAY+  + DHV 
Sbjct:   301 WTSLGGIMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVA 360

Query:   352 DAFYRSIPDSIYWPVFXXXXXXXXXXXXXXXXXXFSIIKQALALGCFPRVKVVHTSKKFL 411
             DAFYRSIP S+YWP+F                  FS++KQALA GCFPRVKVVHTS+KFL
Sbjct:   361 DAFYRSIPGSVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFL 420

Query:   412 GQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGXXXXXXXXXXXXXXXXXXXXXWRCHW 471
             GQIY+PDINWILMILCIAVTAGFKNQSQIGNAYG                     WRCHW
Sbjct:   421 GQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHW 480

Query:   472 ILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHS 531
             +LVLIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAFL+IM+VWHYGT+KRYEFEMH 
Sbjct:   481 VLVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHC 540

Query:   532 KVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLP 591
             +VSMAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK LP
Sbjct:   541 RVSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLP 600

Query:   592 VYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME 651
             VYTVPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD++FEK+LF+SLFL+VRLE+MME
Sbjct:   601 VYTVPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMME 660

Query:   652 G-CSDSDEYSLYGQQTLQXXXXXXXXXXXXXXXXQDLTMSSVDSIVPVKSPLHVNXXXXX 710
             G CSDSD+YS+ G Q  Q                 D T  S++SI PVK    V+     
Sbjct:   661 GGCSDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TFDSIESITPVK---RVSNTVTA 715

Query:   711 XXXXXXHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE 770
                       DELEF+N CRDAGVVHI+GNTVVRA R ++FYKKIAIDY+YAFLRKICRE
Sbjct:   716 SSQMSG---VDELEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICRE 772

Query:   771 NSVIFNVPHESLLNVGQIFYV 791
             +SVI+NVP ESLLNVGQIFYV
Sbjct:   773 HSVIYNVPQESLLNVGQIFYV 793
GO:0005737 "cytoplasm" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009555 "pollen development" evidence=IMP
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XLC6HAK11_ORYSJNo assigned EC number0.77590.99240.9924yesno
Q9SA05POT10_ARATHNo assigned EC number0.81120.99490.9886nono
O64769POT11_ARATHNo assigned EC number0.82750.98980.9886yesno
O49423POT9_ARATHNo assigned EC number0.72920.99740.9776nono
Q653B6HAK18_ORYSJNo assigned EC number0.73710.99240.9899nono
Q8VXB1HAK12_ORYSJNo assigned EC number0.76610.99360.9911yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query791
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-150
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 1e-101
COG0531466 COG0531, PotE, Amino acid transporters [Amino acid 2e-05
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information 
 Score = 1012 bits (2618), Expect = 0.0
 Identities = 448/782 (57%), Positives = 581/782 (74%), Gaps = 12/782 (1%)

Query: 12  ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKFSSL-LLLRFAFQSLGVVYGDLGTSPLY 70
           E+N+G +W LDQ++ +P+  +A  +R+MY    +   +++  A+QSLGVVYGDLGTSPLY
Sbjct: 8   ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLY 67

Query: 71  VFYNTFPH-GIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCR 129
           VF +TF + G+ + +DIIGALSLIIY+LT+IPL+KYVFIV RAND+G+GG+FALYSLLCR
Sbjct: 68  VFKSTFANVGVKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCR 127

Query: 130 HAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVI 189
           +  +  +PNQH TD ELTTY     + K+     +R LE+    +N LL++VL+GTCMVI
Sbjct: 128 YCNISLLPNQHPTDVELTTYVVDNMNRKTR---IQRKLENSRVWQNVLLLIVLLGTCMVI 184

Query: 190 GDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 249
           GDGILTP+ISVLSA  GIK     +   +V +++ VILV LFSLQ +GT +V +LFAPI 
Sbjct: 185 GDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244

Query: 250 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALF 309
           L WF  +  IG  NI K+D SV  AF+P+YI  +F R GR GW SLGGI+L +TGTEA+F
Sbjct: 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMF 304

Query: 310 ADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIV 369
           ADL HF V ++QIAFT +V+PCLLL Y GQAAYL+ H + V D FYRS+P  IYWP+F++
Sbjct: 305 ADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVL 364

Query: 370 ATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIA 429
           AT +A++ASQA ISATFSI+KQA+ALGCFPRVK+VHTS K  GQ+YIP+INWILM+LC+ 
Sbjct: 365 ATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLV 424

Query: 430 VTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYF 489
           +TAGF++  +IGNAYG AVV VM+ TT LMTL+MI++WR H +L L+F  +  ++E  YF
Sbjct: 425 ITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYF 484

Query: 490 SAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVR 549
           SAVLFKV QGGWVPLVIAA F  +MY WHYGT KRY +EM  KVS+ W+LGLGPSLGLVR
Sbjct: 485 SAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVR 544

Query: 550 VPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPK 609
           VPGIGL+YT+LA GVP +FSHFITNLPAIHS VVFVC+KYLPV TVP++ERFL++RIGP+
Sbjct: 545 VPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPR 604

Query: 610 NFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQS 669
            + M+RC ARYGY DL KKD+NFE+ L  SL  F+ +E+  E     D  S+    T + 
Sbjct: 605 AYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQS---DLESMAASWTPEE 661

Query: 670 TDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSC 729
             G  N+ G+   +  D +  +  +    K P     +V   S  SS T+ DE+ FLN C
Sbjct: 662 LMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSV---SGHSSDTQ-DEVAFLNKC 717

Query: 730 RDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIF 789
           ++AGVV+ILGN  V+A + S F+KK+ I+YIY FLR+I R++ V+ N+PHE LL VG ++
Sbjct: 718 KEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVY 777

Query: 790 YV 791
           YV
Sbjct: 778 YV 779

Length = 779
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information
>gnl|CDD|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 791
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00149779 potassium transporter; Provisional 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 91.3
COG0531466 PotE Amino acid transporters [Amino acid transport 82.56
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.1e-258  Score=2184.51  Aligned_cols=771  Identities=48%  Similarity=0.858  Sum_probs=700.6

Q ss_pred             ccccccceeccccCCCCcchhhhhcccc-cc--cchhHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEe
Q 003852           12 ETNKGSMWVLDQKLDQPMDEEAGRLRNM-YR--EKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDII   87 (791)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~La~~slGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vl   87 (791)
                      +..++||||++++.|+ ++.|+++++++ +|  ++.++|+++.|||||+|||||||||||||||+++|++ +.+++|||+
T Consensus        63 ~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIl  141 (852)
T PLN00151         63 GNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVL  141 (852)
T ss_pred             cchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhhee
Confidence            4457899999999999 99999998777 32  2667788899999999999999999999999999987 347999999


Q ss_pred             hhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHhhhccccccccCCCCCCccchhhccccccc-cchhhhHHHHH
Q 003852           88 GALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTKRW  166 (791)
Q Consensus        88 GvlSLIfWtLtliv~iKYv~ivLrAdn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~  166 (791)
                      |+|||||||||||+++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+.+.++ +.+++.++|++
T Consensus       142 GvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~  221 (852)
T PLN00151        142 GALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKER  221 (852)
T ss_pred             eehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988766 77778899999


Q ss_pred             hhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchh
Q 003852          167 LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFA  246 (791)
Q Consensus       167 le~~~~~~~~l~~l~l~G~~m~~gDGviTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~Fg  246 (791)
                      ||||+++|.+++++|++|+||+|||||||||||||||||||++..|++++++||||||+||++||++||+||+|||++||
T Consensus       222 lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~Fg  301 (852)
T PLN00151        222 LETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFG  301 (852)
T ss_pred             hhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhH
Q 003852          247 PIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTV  326 (791)
Q Consensus       247 PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~  326 (791)
                      |||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus       302 PImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~  381 (852)
T PLN00151        302 PALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTC  381 (852)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccchhhhccccccccccccccccCcchHHHHHHHHHHHHHHHhHhhhhhhHHHHHHHHcCCCCceeEEec
Q 003852          327 VVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHT  406 (791)
Q Consensus       327 ~V~P~L~L~Y~GQaA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hT  406 (791)
                      +|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+||
T Consensus       382 ~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHT  461 (852)
T PLN00151        382 LVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHT  461 (852)
T ss_pred             hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 003852          407 SKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVEC  486 (791)
Q Consensus       407 S~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~  486 (791)
                      |++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|+
T Consensus       462 S~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~  541 (852)
T PLN00151        462 SRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVEL  541 (852)
T ss_pred             CCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchh
Q 003852          487 TYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPH  566 (791)
Q Consensus       487 ~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~  566 (791)
                      +|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.+|+|+
T Consensus       542 ~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~  621 (852)
T PLN00151        542 VFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPA  621 (852)
T ss_pred             HHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999899999999999999999999


Q ss_pred             hHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCcEEEEEEEeecccCCC-ChHHHHHHHHHHHHHHHH
Q 003852          567 IFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVR  645 (791)
Q Consensus       567 ~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yrv~~ryGy~d~~~-~~~~fe~~lv~~L~~FI~  645 (791)
                      +|.||++|||++||++||||||++|+|+||++|||++++++++++++|||++||||||..+ ++++||++|+++|++|||
T Consensus       622 ~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~  701 (852)
T PLN00151        622 IFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIR  701 (852)
T ss_pred             HHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999976 789999999999999999


Q ss_pred             hhhhccCC---CCCC-------CccccccccccccccccCC--CCCCCCCCccccccccCCCC-CcCCCccccccccCcc
Q 003852          646 LEAMMEGC---SDSD-------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSSVDSIV-PVKSPLHVNSTVMSSS  712 (791)
Q Consensus       646 ~e~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~  712 (791)
                      +|+.....   ++++       +++..........+.....  ......+........+.+.. +..++++|.      +
T Consensus       702 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  775 (852)
T PLN00151        702 REAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS------D  775 (852)
T ss_pred             hhhhhccccccccccccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc------c
Confidence            98743211   1100       1111110000000000000  00000000000000000000 001222321      1


Q ss_pred             cCCCcchHHHHHHHHHhHhCCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003852          713 QMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV  791 (791)
Q Consensus       713 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkar~~SsflKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvYev  791 (791)
                      .  +++++||+++|++|+|+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||++|+||||+|||
T Consensus       776 ~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        776 E--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             c--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            1  5789999999999999999999999999999999999999999999999999999999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query791
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.2 bits (124), Expect = 7e-07
 Identities = 66/439 (15%), Positives = 107/439 (24%), Gaps = 171/439 (38%)

Query: 7   IDEDNETNKGSMWVLDQKLDQPMD---------EEAGRL---------RNMYREKFSSLL 48
           ++E    N    +++     +            E+  RL          N+ R +    L
Sbjct: 83  VEEVLRINYK--FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ--PYL 138

Query: 49  LLRFAFQSLG-----VVYGDLGT--SPL-------YVFYNTFPHGI--------DDPEDI 86
            LR A   L      ++ G LG+  + +       Y         I        + PE +
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 87  IGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEEL 146
           +  L  ++Y +                          ++    H+    I    R    +
Sbjct: 199 LEMLQKLLYQID-----------------------PNWTSRSDHSS--NIK--LRI-HSI 230

Query: 147 TTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLML----------VLVGTCMVIGDGILTP 196
               R     K +              +N LL+L              +C ++   + T 
Sbjct: 231 QAELRRLLKSKPY--------------ENCLLVLLNVQNAKAWNAFNLSCKIL---LTTR 273

Query: 197 AISVLSASGGIKVDHP---HMSNG-----VVVLVAVVILVGLFSLQHYGTDRVGWLFAPI 248
              V          H    H S       V  L+   +      L             P 
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT-----NP- 327

Query: 249 VLLWFLLIGGIG-----MLNIWKY-------------DSSVLKAFSPVYIYRYFRRGGRD 290
                  +  I       L  W               +SS L    P    + F      
Sbjct: 328 -----RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFD----- 376

Query: 291 GWTSLGGIMLSITGTEALFADLAHFPVSAIQI------AFTVVVFPCLLLAYSGQAAYLM 344
                    LS+      F   AH P   + +         V+V    L  YS     L+
Sbjct: 377 --------RLSV------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-----LV 417

Query: 345 NHQDHVVDAFYRSIPDSIY 363
             Q         SIP  IY
Sbjct: 418 EKQP---KESTISIPS-IY 432
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query791
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 96.58
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 96.4
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 95.63
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
Probab=96.58  E-value=0.034  Score=61.26  Aligned_cols=100  Identities=18%  Similarity=0.193  Sum_probs=54.8

Q ss_pred             EehhHHHHHHHHHhhhcccccccccchhhH----HHHHHHHHHHhhhhhccccCccee----eecChHHHHHHHHhcCcc
Q 003852          219 VVLVAVVILVGLFSLQHYGTDRVGWLFAPI----VLLWFLLIGGIGMLNIWKYDSSVL----KAFSPVYIYRYFRRGGRD  290 (791)
Q Consensus       219 Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPI----m~vWf~~i~~~GiynI~~~~P~Vl----~AlnP~ya~~f~~~~g~~  290 (791)
                      ...+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            456788888888899999988777654322    222344555667766654333221    1122211       1234


Q ss_pred             eeeeecceeeeeccccccccCCCCCC--Ccceehhhh
Q 003852          291 GWTSLGGIMLSITGTEALFADLAHFP--VSAIQIAFT  325 (791)
Q Consensus       291 g~~~LG~V~L~iTGaEALyADlGHFg--~~~Ir~aw~  325 (791)
                      +|..+..++.+.+|-|+.-.=-+-.-  +|.+..|-.
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~  239 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML  239 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence            56667788899999998644333332  344544433
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00