Citrus Sinensis ID: 003874
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FGS8 | 1027 | C2 and GRAM domain-contai | yes | no | 0.986 | 0.758 | 0.636 | 0.0 | |
| Q9ZVT9 | 1020 | C2 and GRAM domain-contai | no | no | 0.987 | 0.764 | 0.570 | 0.0 | |
| O42976 | 764 | Uncharacterized membrane | yes | no | 0.136 | 0.141 | 0.279 | 5e-08 | |
| Q6PFQ7 | 802 | Ras GTPase-activating pro | no | no | 0.144 | 0.142 | 0.295 | 2e-07 | |
| Q93XX4 | 751 | C2 domain-containing prot | no | no | 0.146 | 0.154 | 0.284 | 7e-07 | |
| Q3KR37 | 738 | GRAM domain-containing pr | yes | no | 0.086 | 0.092 | 0.444 | 1e-06 | |
| Q80TI0 | 738 | GRAM domain-containing pr | no | no | 0.086 | 0.092 | 0.444 | 1e-06 | |
| Q96CP6 | 724 | GRAM domain-containing pr | no | no | 0.103 | 0.113 | 0.343 | 1e-06 | |
| Q3KR56 | 723 | GRAM domain-containing pr | no | no | 0.075 | 0.082 | 0.434 | 2e-06 | |
| Q8VEF1 | 722 | GRAM domain-containing pr | no | no | 0.075 | 0.083 | 0.434 | 2e-06 |
| >sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis thaliana GN=At5g50170 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/781 (63%), Positives = 628/781 (80%), Gaps = 2/781 (0%)
Query: 1 MMQSRENEGD-MPENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEG 59
+MQS ++E + MPENL GG+L+DQ Y VSPC+LN FLF P SQFRK+LAELQG DVQEG
Sbjct: 237 LMQSSDSEREEMPENLTGGVLVDQKYLVSPCELNKFLFTPSSQFRKELAELQGLSDVQEG 296
Query: 60 PWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYLKANGQEFAILVTVSTPDVPYGN 119
PW + LTR V+YM+AATK+VKAVKATE Q Y KA+G++FA+ V+VSTPDVPYGN
Sbjct: 297 PWTMMQEDTPRLTRVVTYMRAATKMVKAVKATENQVYRKASGKQFAVFVSVSTPDVPYGN 356
Query: 120 TFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQFAN 179
TF ++LLYKI+P E ++G ++S LIISWGI F QST+M+GMIEGGARQGLKESFEQF+N
Sbjct: 357 TFKIELLYKILPETEPTAGGEASRLIISWGIQFSQSTIMKGMIEGGARQGLKESFEQFSN 416
Query: 180 LLAQNLKILDSKDASDKDHMLATLQTEQQSDWELASEYFWNFTVVSAGFMILYVVVHILL 239
LLA+ K LD DK+ ++AT+Q+E ++D + A YFW+ +V+ A + +YVVVH+L
Sbjct: 417 LLAKTYKTLDPAVVLDKEQVIATVQSEPKTDLKSAFLYFWSSSVICAVLLSVYVVVHMLH 476
Query: 240 CEPSKRQGLEFYGLDLPDSFGELISCGILVIQLEQVFNMVGHFVRARLRKGSDHGVKAQG 299
CEPSK QG EFYGLDLPDSFGEL S GILV+ LE+V+ M HFV+ARL +G D GVKA G
Sbjct: 477 CEPSKIQGFEFYGLDLPDSFGELFSSGILVLLLERVYIMTVHFVQARLHRGRDQGVKANG 536
Query: 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAME 359
GW+LT+AL++G NLAS E T L DPYVVFTCNGKTRTSSV+LQ DPQW++++EFDAME
Sbjct: 537 KGWILTIALIKGTNLASVEATELFDPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAME 596
Query: 360 EPPSVLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLR 419
EPPSVLDVEVFDFDGPFDQ SLGHAEINFLKHT+ ELAD+ V+L G AQ++QSK+ LR
Sbjct: 597 EPPSVLDVEVFDFDGPFDQGASLGHAEINFLKHTADELADLSVALVGNHAQASQSKLQLR 656
Query: 420 IFLENNNGVETIKEYLTKMEKEVGKKLNLRSPHRNSTFQKLFALPPEEFLIKDFTCYLKR 479
IFLEN NGVET+K+YL+K+EKEVGKKLN+RSP +NS FQKLF LP EEFL+K++TCYLKR
Sbjct: 657 IFLENKNGVETMKDYLSKVEKEVGKKLNIRSPQKNSAFQKLFGLPHEEFLLKEYTCYLKR 716
Query: 480 KMPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKG 539
K+P+QG+LFLSARIV FY+N+FG+KTKF+FLWEDI+DIQ+L P+ A++GSP L+IIL K
Sbjct: 717 KLPVQGKLFLSARIVAFYSNVFGHKTKFYFLWEDIDDIQVLPPTFASLGSPLLLIILKKN 776
Query: 540 RGLDARHGAKSQDEEGRLRFYFQSFVSFNDASRTIMALWRSRTLTAYQKEQIAEEQQVQE 599
RGLDA+HGAKSQD+EGRL FYFQSFVSF+ SRTIMALW++RTL+ + QI EE Q
Sbjct: 777 RGLDAKHGAKSQDDEGRLSFYFQSFVSFDATSRTIMALWKTRTLSVDHRAQIVEEDQDVA 836
Query: 600 EMSTAADRGSVPNFEDA-KMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTT 658
+ + +V + DA MSKVY +LP V+ +M++F GG+LE ++MEKSGC +Y +T
Sbjct: 837 DPFLLPEAVTVVSDADALMMSKVYTCDLPCDVELVMKIFGGGELERKIMEKSGCLSYAST 896
Query: 659 PWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGWIVNEVMSLHDVPFDDH 718
W+ KPGV ER LSY++N +VS+FGG VTC QQKSP + EGWI+NE+++LHDVPF DH
Sbjct: 897 TWESKKPGVYERRLSYKYNHYVSVFGGGVTCAQQKSPAPNDEGWILNEIVALHDVPFGDH 956
Query: 719 FRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 778
FRVH RYE++K+ + KC +Y+ I WLK+ KF+QRI+++I EKF +R K + +L ++
Sbjct: 957 FRVHIRYEVKKAGVDCKTSKCEVYLKIRWLKTIKFEQRISKSIMEKFRNRFKVIFDLFQK 1016
Query: 779 E 779
E
Sbjct: 1017 E 1017
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370 OS=Arabidopsis thaliana GN=At1g03370 PE=2 SV=4 | Back alignment and function description |
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| >sp|O42976|YGZ7_SCHPO Uncharacterized membrane protein C20F10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC20F10.07 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6PFQ7|RASL2_MOUSE Ras GTPase-activating protein 4 OS=Mus musculus GN=Rasa4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q93XX4|C2D61_ARATH C2 domain-containing protein At1g53590 OS=Arabidopsis thaliana GN=NTMC2T6.1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q3KR37|GRM1B_HUMAN GRAM domain-containing protein 1B OS=Homo sapiens GN=GRAMD1B PE=1 SV=1 | Back alignment and function description |
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| >sp|Q80TI0|GRM1B_MOUSE GRAM domain-containing protein 1B OS=Mus musculus GN=Gramd1b PE=1 SV=2 | Back alignment and function description |
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| >sp|Q96CP6|GRM1A_HUMAN GRAM domain-containing protein 1A OS=Homo sapiens GN=GRAMD1A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q3KR56|GRM1A_RAT GRAM domain-containing protein 1A OS=Rattus norvegicus GN=Gramd1a PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8VEF1|GRM1A_MOUSE GRAM domain-containing protein 1A OS=Mus musculus GN=Gramd1a PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| 359491211 | 1021 | PREDICTED: C2 and GRAM domain-containing | 0.998 | 0.772 | 0.767 | 0.0 | |
| 297733711 | 1060 | unnamed protein product [Vitis vinifera] | 0.996 | 0.742 | 0.767 | 0.0 | |
| 255540521 | 1022 | conserved hypothetical protein [Ricinus | 0.987 | 0.763 | 0.753 | 0.0 | |
| 224133662 | 1039 | predicted protein [Populus trichocarpa] | 0.993 | 0.755 | 0.723 | 0.0 | |
| 356507290 | 1014 | PREDICTED: C2 and GRAM domain-containing | 0.992 | 0.773 | 0.720 | 0.0 | |
| 356518944 | 1017 | PREDICTED: C2 and GRAM domain-containing | 0.992 | 0.770 | 0.721 | 0.0 | |
| 357461815 | 1014 | GRAM domain-containing protein 1B [Medic | 0.991 | 0.772 | 0.680 | 0.0 | |
| 297792313 | 1028 | C2 domain-containing protein [Arabidopsi | 0.986 | 0.757 | 0.638 | 0.0 | |
| 15240629 | 1027 | C2 and GRAM domain-containing protein [A | 0.986 | 0.758 | 0.636 | 0.0 | |
| 359495634 | 1030 | PREDICTED: C2 and GRAM domain-containing | 0.983 | 0.754 | 0.599 | 0.0 |
| >gi|359491211|ref|XP_002277671.2| PREDICTED: C2 and GRAM domain-containing protein At5g50170-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/790 (76%), Positives = 694/790 (87%), Gaps = 1/790 (0%)
Query: 1 MMQSRENEGDMPENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGP 60
+MQSR E +MPENLQGGILLDQ Y V+ LN LFAP+SQFR+DLAELQ T +++EGP
Sbjct: 231 LMQSRNGEQEMPENLQGGILLDQTYIVASKVLNMLLFAPNSQFRQDLAELQRTTNMKEGP 290
Query: 61 WEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYLKANGQEFAILVTVSTPDVPYGNT 120
W WKSG ++CLTR VSY +AATKLVKAV A E+QTY+KA+G+EFA+LV V TPDVPYGN+
Sbjct: 291 WTWKSGALSCLTRVVSYTQAATKLVKAVDALEEQTYIKADGREFAVLVNVDTPDVPYGNS 350
Query: 121 FNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQFANL 180
F V+LLYKI+PGPELSSGE+SSHL++SWG+ F Q+T+MRGMIEGGARQGLKESF+QFANL
Sbjct: 351 FKVELLYKIMPGPELSSGEESSHLVVSWGLSFSQNTIMRGMIEGGARQGLKESFDQFANL 410
Query: 181 LAQNLKILDSKDASDKDHMLATLQTEQQSDWELASEYFWNFTVVSAGFMILYVVVHILLC 240
LAQN K L S D+ DKD MLATLQTEQQSDWELA+EYF NFTVVSA FM++Y++VHILL
Sbjct: 411 LAQNFKTLGSIDSLDKDQMLATLQTEQQSDWELATEYFGNFTVVSAFFMVIYILVHILLS 470
Query: 241 EPSKRQGLEFYGLDLPDSFGELISCGILVIQLEQVFNMVGHFVRARLRKGSDHGVKAQGD 300
S++QGLEF GLDLPDSFGELI+CGILVIQLE+V+ M+ HFV+AR ++GSDHGVKAQGD
Sbjct: 471 VRSEQQGLEFSGLDLPDSFGELITCGILVIQLERVYAMILHFVQARFQRGSDHGVKAQGD 530
Query: 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEE 360
GWVLTVAL+EG+NLAS + TGLSDPYVVFTCNGKTRTSSV+LQT DPQW++ILEFDAMEE
Sbjct: 531 GWVLTVALIEGINLASLDSTGLSDPYVVFTCNGKTRTSSVKLQTHDPQWNEILEFDAMEE 590
Query: 361 PPSVLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRI 420
PP+VLDVEVFDFDGPFD+A SLGHAEINFL+HTSTELADMWVSLEGKLAQS+QSK+HLRI
Sbjct: 591 PPAVLDVEVFDFDGPFDEAASLGHAEINFLRHTSTELADMWVSLEGKLAQSSQSKLHLRI 650
Query: 421 FLENNNGVETIKEYLTKMEKEVGKKLNLRSPHRNSTFQKLFALPPEEFLIKDFTCYLKRK 480
FL+NNNGVETIKEYL KMEKEVGKK+ L+SPHRNSTF LF LPPEEFLI DFTCYLKRK
Sbjct: 651 FLDNNNGVETIKEYLAKMEKEVGKKITLQSPHRNSTFLALFGLPPEEFLINDFTCYLKRK 710
Query: 481 MPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKGR 540
+PLQGRLFLSARIVGFYANLFG+KTKFFFLWEDIEDIQ+ PSLA++GSPSLVIIL KGR
Sbjct: 711 VPLQGRLFLSARIVGFYANLFGHKTKFFFLWEDIEDIQVHPPSLASLGSPSLVIILRKGR 770
Query: 541 GLDARHGAKSQDEEGRLRFYFQSFVSFNDASRTIMALWRSRTLTAYQKEQIAEEQQVQEE 600
GLDARHGAKSQDEEGRL+FYFQSFVSFN ASRTIMALWR+RTLT QK QIA+EQQ ++
Sbjct: 771 GLDARHGAKSQDEEGRLKFYFQSFVSFNVASRTIMALWRTRTLTPEQKAQIADEQQDEDG 830
Query: 601 MS-TAADRGSVPNFEDAKMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTP 659
S D GSV N E+AKMSKVY+AELPI +K+LMEMFDGG LEH++MEKSG NY T
Sbjct: 831 SSLLLEDPGSVFNVEEAKMSKVYSAELPIDIKSLMEMFDGGNLEHKIMEKSGYLNYKATG 890
Query: 660 WDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGWIVNEVMSLHDVPFDDHF 719
W+ VKP + ERHL ++FNRHVSIFGGEVTCTQ+KSP+ + GWI+NEVM+LHD+PF DHF
Sbjct: 891 WETVKPDLYERHLCFKFNRHVSIFGGEVTCTQKKSPIGNDNGWILNEVMALHDIPFGDHF 950
Query: 720 RVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779
RVHFRY+IE LA CKC +++ I WLKST FQQRIT+NITEKFT RLKE+IELVERE
Sbjct: 951 RVHFRYQIENFGLAPGKCKCEVHMEILWLKSTVFQQRITRNITEKFTSRLKEIIELVERE 1010
Query: 780 ILFATQQDAS 789
L QD+S
Sbjct: 1011 ALLNCPQDSS 1020
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733711|emb|CBI14958.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255540521|ref|XP_002511325.1| conserved hypothetical protein [Ricinus communis] gi|223550440|gb|EEF51927.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224133662|ref|XP_002321630.1| predicted protein [Populus trichocarpa] gi|222868626|gb|EEF05757.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356507290|ref|XP_003522401.1| PREDICTED: C2 and GRAM domain-containing protein At5g50170-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356518944|ref|XP_003528135.1| PREDICTED: C2 and GRAM domain-containing protein At5g50170-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357461815|ref|XP_003601189.1| GRAM domain-containing protein 1B [Medicago truncatula] gi|355490237|gb|AES71440.1| GRAM domain-containing protein 1B [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297792313|ref|XP_002864041.1| C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297309876|gb|EFH40300.1| C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15240629|ref|NP_199828.1| C2 and GRAM domain-containing protein [Arabidopsis thaliana] gi|75309065|sp|Q9FGS8.1|C2GR2_ARATH RecName: Full=C2 and GRAM domain-containing protein At5g50170 gi|9759019|dbj|BAB09388.1| unnamed protein product [Arabidopsis thaliana] gi|15810203|gb|AAL07002.1| AT5g50170/K6A12_3 [Arabidopsis thaliana] gi|32815845|gb|AAP88330.1| At5g50170/K6A12_3 [Arabidopsis thaliana] gi|332008523|gb|AED95906.1| C2 and GRAM domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359495634|ref|XP_002264782.2| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like [Vitis vinifera] gi|297736702|emb|CBI25738.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| TAIR|locus:2157707 | 1027 | AT5G50170 "AT5G50170" [Arabido | 0.986 | 0.758 | 0.615 | 1.9e-267 | |
| UNIPROTKB|Q5Z6I4 | 1037 | OSJNBa0055N24.36 "Putative Osn | 0.977 | 0.744 | 0.544 | 9e-235 | |
| UNIPROTKB|Q66VB0 | 1086 | Os06g0607900 "Os06g0607900 pro | 0.981 | 0.713 | 0.485 | 2.8e-215 | |
| UNIPROTKB|Q69V64 | 354 | P0556B08.10 "C2 domain-contain | 0.436 | 0.974 | 0.515 | 2.5e-97 | |
| TAIR|locus:2097578 | 594 | AT3G59660 "AT3G59660" [Arabido | 0.577 | 0.767 | 0.227 | 8.3e-20 | |
| UNIPROTKB|Q3KR37 | 738 | GRAMD1B "GRAM domain-containin | 0.098 | 0.105 | 0.414 | 2.1e-08 | |
| TAIR|locus:2205625 | 598 | VAD1 "VASCULAR ASSOCIATED DEAT | 0.083 | 0.110 | 0.303 | 5.1e-08 | |
| MGI|MGI:1925037 | 738 | Gramd1b "GRAM domain containin | 0.098 | 0.105 | 0.414 | 1.4e-07 | |
| RGD|1305443 | 733 | Gramd1b "GRAM domain containin | 0.098 | 0.106 | 0.414 | 2.2e-07 | |
| DICTYBASE|DDB_G0267942 | 898 | DDB_G0267942 "GRAM domain-cont | 0.108 | 0.095 | 0.344 | 5.4e-07 |
| TAIR|locus:2157707 AT5G50170 "AT5G50170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2559 (905.9 bits), Expect = 1.9e-267, Sum P(2) = 1.9e-267
Identities = 481/781 (61%), Positives = 608/781 (77%)
Query: 1 MMQSRENEGD-MPENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEG 59
+MQS ++E + MPENL GG+L+DQ Y VSPC+LN FLF P SQFRK+LAELQG DVQEG
Sbjct: 237 LMQSSDSEREEMPENLTGGVLVDQKYLVSPCELNKFLFTPSSQFRKELAELQGLSDVQEG 296
Query: 60 PWEWKSGEMTCLTRAVSYMXXXXXXXXXXXXXEQQTYLKANGQEFAILVTVSTPDVPYGN 119
PW + LTR V+YM E Q Y KA+G++FA+ V+VSTPDVPYGN
Sbjct: 297 PWTMMQEDTPRLTRVVTYMRAATKMVKAVKATENQVYRKASGKQFAVFVSVSTPDVPYGN 356
Query: 120 TFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQFAN 179
TF ++LLYKI+P E ++G ++S LIISWGI F QST+M+GMIEGGARQGLKESFEQF+N
Sbjct: 357 TFKIELLYKILPETEPTAGGEASRLIISWGIQFSQSTIMKGMIEGGARQGLKESFEQFSN 416
Query: 180 LLAQNLKILDSKDASDKDHMLATLQTEQQSDWELASEYFWNFTVVSAGFMILYVVVHILL 239
LLA+ K LD DK+ ++AT+Q+E ++D + A YFW+ +V+ A + +YVVVH+L
Sbjct: 417 LLAKTYKTLDPAVVLDKEQVIATVQSEPKTDLKSAFLYFWSSSVICAVLLSVYVVVHMLH 476
Query: 240 CEPSKRQGLEFYGLDLPDSFGELISCGILVIQLEQVFNMVGHFVRARLRKGSDHGVKAQG 299
CEPSK QG EFYGLDLPDSFGEL S GILV+ LE+V+ M HFV+ARL +G D GVKA G
Sbjct: 477 CEPSKIQGFEFYGLDLPDSFGELFSSGILVLLLERVYIMTVHFVQARLHRGRDQGVKANG 536
Query: 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAME 359
GW+LT+AL++G NLAS E T L DPYVVFTCNGKTRTSSV+LQ DPQW++++EFDAME
Sbjct: 537 KGWILTIALIKGTNLASVEATELFDPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAME 596
Query: 360 EPPSVLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLR 419
EPPSVLDVEVFDFDGPFDQ SLGHAEINFLKHT+ ELAD+ V+L G AQ++QSK+ LR
Sbjct: 597 EPPSVLDVEVFDFDGPFDQGASLGHAEINFLKHTADELADLSVALVGNHAQASQSKLQLR 656
Query: 420 IFLENNNGVETIKEYLTKMEKEVGKKLNLRSPHRNSTFQKLFALPPEEFLIKDFTCYLKR 479
IFLEN NGVET+K+YL+K+EKEVGKKLN+RSP +NS FQKLF LP EEFL+K++TCYLKR
Sbjct: 657 IFLENKNGVETMKDYLSKVEKEVGKKLNIRSPQKNSAFQKLFGLPHEEFLLKEYTCYLKR 716
Query: 480 KMPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKG 539
K+P+QG+LFLSARIV FY+N+FG+KTKF+FLWEDI+DIQ+L P+ A++GSP L+IIL K
Sbjct: 717 KLPVQGKLFLSARIVAFYSNVFGHKTKFYFLWEDIDDIQVLPPTFASLGSPLLLIILKKN 776
Query: 540 RGLDARHGAKSQDEEGRLRFYFQSFVSFNDASRTIMALWRSRTLTAYXXXXXXXXXXXXX 599
RGLDA+HGAKSQD+EGRL FYFQSFVSF+ SRTIMALW++RTL+
Sbjct: 777 RGLDAKHGAKSQDDEGRLSFYFQSFVSFDATSRTIMALWKTRTLSVDHRAQIVEEDQDVA 836
Query: 600 XMSTAADRGSVPNFEDA-KMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTT 658
+ +V + DA MSKVY +LP V+ +M++F GG+LE ++MEKSGC +Y +T
Sbjct: 837 DPFLLPEAVTVVSDADALMMSKVYTCDLPCDVELVMKIFGGGELERKIMEKSGCLSYAST 896
Query: 659 PWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGWIVNEVMSLHDVPFDDH 718
W+ KPGV ER LSY++N +VS+FGG VTC QQKSP + EGWI+NE+++LHDVPF DH
Sbjct: 897 TWESKKPGVYERRLSYKYNHYVSVFGGGVTCAQQKSPAPNDEGWILNEIVALHDVPFGDH 956
Query: 719 FRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 778
FRVH RYE++K+ + KC +Y+ I WLK+ KF+QRI+++I EKF +R K + +L ++
Sbjct: 957 FRVHIRYEVKKAGVDCKTSKCEVYLKIRWLKTIKFEQRISKSIMEKFRNRFKVIFDLFQK 1016
Query: 779 E 779
E
Sbjct: 1017 E 1017
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| UNIPROTKB|Q5Z6I4 OSJNBa0055N24.36 "Putative Osnop" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q66VB0 Os06g0607900 "Os06g0607900 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q69V64 P0556B08.10 "C2 domain-containing protein-like" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2097578 AT3G59660 "AT3G59660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3KR37 GRAMD1B "GRAM domain-containing protein 1B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2205625 VAD1 "VASCULAR ASSOCIATED DEATH1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1925037 Gramd1b "GRAM domain containing 1B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1305443 Gramd1b "GRAM domain containing 1B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0267942 DDB_G0267942 "GRAM domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FGS8 | C2GR2_ARATH | No assigned EC number | 0.6363 | 0.9860 | 0.7585 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 790 | |||
| cd13219 | 161 | cd13219, PH-GRAM_C2-GRAM, C2 and GRAM domain-conta | 1e-103 | |
| smart00568 | 60 | smart00568, GRAM, domain in glucosyltransferases, | 2e-16 | |
| cd00030 | 102 | cd00030, C2, C2 domain | 2e-16 | |
| pfam02893 | 60 | pfam02893, GRAM, GRAM domain | 3e-14 | |
| cd13220 | 111 | cd13220, PH-GRAM_GRAMDC, GRAM domain-containing pr | 1e-13 | |
| cd04025 | 123 | cd04025, C2B_RasA1_RasA4, C2 domain second repeat | 2e-13 | |
| cd04038 | 145 | cd04038, C2_ArfGAP, C2 domain present in Arf GTPas | 8e-13 | |
| pfam00168 | 85 | pfam00168, C2, C2 domain | 9e-13 | |
| smart00239 | 101 | smart00239, C2, Protein kinase C conserved region | 8e-12 | |
| cd04024 | 128 | cd04024, C2A_Synaptotagmin-like, C2 domain first r | 2e-11 | |
| cd08376 | 116 | cd08376, C2B_MCTP_PRT, C2 domain second repeat fou | 1e-10 | |
| cd13351 | 125 | cd13351, PH-GRAM1_TCB1D9_TCB1D9B, TBC1 domain fami | 3e-10 | |
| cd13216 | 117 | cd13216, PH-GRAM2_AGT26, Autophagy-related protein | 1e-08 | |
| cd04042 | 121 | cd04042, C2A_MCTP_PRT, C2 domain first repeat foun | 1e-08 | |
| cd04040 | 115 | cd04040, C2D_Tricalbin-like, C2 domain fourth repe | 3e-08 | |
| cd10570 | 94 | cd10570, PH-GRAM, Pleckstrin Homology-Glucosyltran | 3e-08 | |
| cd08391 | 121 | cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir | 4e-08 | |
| cd13350 | 135 | cd13350, PH-GRAM1_TBC1D8B, TBC1 domain family memb | 1e-07 | |
| cd08377 | 119 | cd08377, C2C_MCTP_PRT, C2 domain third repeat foun | 3e-07 | |
| cd13217 | 100 | cd13217, PH-GRAM1_TCB1D8_TCB1D9_family, TCB1D8 and | 5e-06 | |
| cd08403 | 134 | cd08403, C2B_Synaptotagmin-3-5-6-9-10, C2 domain s | 1e-05 | |
| COG5038 | 1227 | COG5038, COG5038, Ca2+-dependent lipid-binding pro | 2e-05 | |
| cd00276 | 134 | cd00276, C2B_Synaptotagmin, C2 domain second repea | 3e-05 | |
| cd04017 | 135 | cd04017, C2D_Ferlin, C2 domain fourth repeat in Fe | 3e-05 | |
| cd04043 | 126 | cd04043, C2_Munc13_fungal, C2 domain in Munc13 (ma | 3e-05 | |
| cd08675 | 137 | cd08675, C2B_RasGAP, C2 domain second repeat of Ra | 6e-05 | |
| cd08384 | 133 | cd08384, C2B_Rabphilin_Doc2, C2 domain second repe | 1e-04 | |
| cd04049 | 124 | cd04049, C2_putative_Elicitor-responsive_gene, C2 | 1e-04 | |
| cd08387 | 124 | cd08387, C2A_Synaptotagmin-8, C2A domain first rep | 2e-04 | |
| cd04031 | 125 | cd04031, C2A_RIM1alpha, C2 domain first repeat con | 3e-04 | |
| cd04046 | 126 | cd04046, C2_Calpain, C2 domain present in Calpain | 3e-04 | |
| cd08681 | 118 | cd08681, C2_fungal_Inn1p-like, C2 domain found in | 3e-04 | |
| cd08375 | 136 | cd08375, C2_Intersectin, C2 domain present in Inte | 6e-04 | |
| cd04037 | 124 | cd04037, C2E_Ferlin, C2 domain fifth repeat in Fer | 0.001 | |
| cd13349 | 135 | cd13349, PH-GRAM1_TBC1D8, TBC1 domain family membe | 0.001 | |
| cd04014 | 132 | cd04014, C2_PKC_epsilon, C2 domain in Protein Kina | 0.001 | |
| cd08402 | 136 | cd08402, C2B_Synaptotagmin-1, C2 domain second rep | 0.003 | |
| cd04026 | 131 | cd04026, C2_PKC_alpha_gamma, C2 domain in Protein | 0.003 | |
| cd04018 | 151 | cd04018, C2C_Ferlin, C2 domain third repeat in Fer | 0.004 | |
| cd04050 | 105 | cd04050, C2B_Synaptotagmin-like, C2 domain second | 0.004 |
| >gnl|CDD|241373 cd13219, PH-GRAM_C2-GRAM, C2 and GRAM domain-containing protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-103
Identities = 125/161 (77%), Positives = 143/161 (88%), Gaps = 1/161 (0%)
Query: 436 TKMEKEVGKKLNLRSPHRNSTFQKLFALPPEEFLIKDFTCYLKRKMPLQGRLFLSARIVG 495
+KMEKEVGKK+NLRSP +NS FQKLF LPPEEFLI DFTC LKRK PLQGRLFLSARI+G
Sbjct: 1 SKMEKEVGKKINLRSPQKNSAFQKLFGLPPEEFLINDFTCALKRKFPLQGRLFLSARIIG 60
Query: 496 FYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKGRGLDARHGAKSQDEEG 555
FY+NLFG+KTKFFFLWEDIE+IQ+ PSL +VGSPS+VIIL KGRGLDARHGAK QD EG
Sbjct: 61 FYSNLFGHKTKFFFLWEDIEEIQVSPPSL-SVGSPSIVIILRKGRGLDARHGAKPQDPEG 119
Query: 556 RLRFYFQSFVSFNDASRTIMALWRSRTLTAYQKEQIAEEQQ 596
RL+F+FQSFVSFN A RTIMALW++R+L+ QK+QI EE +
Sbjct: 120 RLKFHFQSFVSFNHAFRTIMALWKNRSLSPEQKKQIVEESE 160
|
C2GRAM contains two N-terminal C2 domains followed by a single PH-GRAM domain. Since it contains both of these domains it is assumed that this gene cross-links both calcium and phosphoinositide signaling pathways. In general he C2 domain is involved in binding phospholipids in a calcium dependent manner or calcium independent manner. The GRAM domain is found in glucosyltransferases, myotubularins and other putative membrane-associated proteins. The GRAM domain is part of a larger motif with a pleckstrin homology (PH) domain fold. Length = 161 |
| >gnl|CDD|214725 smart00568, GRAM, domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins | Back alignment and domain information |
|---|
| >gnl|CDD|175973 cd00030, C2, C2 domain | Back alignment and domain information |
|---|
| >gnl|CDD|217271 pfam02893, GRAM, GRAM domain | Back alignment and domain information |
|---|
| >gnl|CDD|241374 cd13220, PH-GRAM_GRAMDC, GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain | Back alignment and domain information |
|---|
| >gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
| >gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
| >gnl|CDD|215765 pfam00168, C2, C2 domain | Back alignment and domain information |
|---|
| >gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
| >gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|176022 cd08376, C2B_MCTP_PRT, C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >gnl|CDD|241505 cd13351, PH-GRAM1_TCB1D9_TCB1D9B, TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241370 cd13216, PH-GRAM2_AGT26, Autophagy-related protein 26/Sterol 3-beta-glucosyltransferase Pleckstrin homology (PH) domain, repeat 2 | Back alignment and domain information |
|---|
| >gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|241306 cd10570, PH-GRAM, Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain | Back alignment and domain information |
|---|
| >gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|241504 cd13350, PH-GRAM1_TBC1D8B, TBC1 domain family member 8B (TBC1D8B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|176023 cd08377, C2C_MCTP_PRT, C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >gnl|CDD|241371 cd13217, PH-GRAM1_TCB1D8_TCB1D9_family, TCB1D8 and TCB1D9 family Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|176048 cd08403, C2B_Synaptotagmin-3-5-6-9-10, C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
| >gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
| >gnl|CDD|175984 cd04017, C2D_Ferlin, C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
| >gnl|CDD|176008 cd04043, C2_Munc13_fungal, C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
| >gnl|CDD|176057 cd08675, C2B_RasGAP, C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
| >gnl|CDD|176030 cd08384, C2B_Rabphilin_Doc2, C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
| >gnl|CDD|176014 cd04049, C2_putative_Elicitor-responsive_gene, C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
| >gnl|CDD|176033 cd08387, C2A_Synaptotagmin-8, C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
| >gnl|CDD|175997 cd04031, C2A_RIM1alpha, C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
| >gnl|CDD|176011 cd04046, C2_Calpain, C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
| >gnl|CDD|176063 cd08681, C2_fungal_Inn1p-like, C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
| >gnl|CDD|176021 cd08375, C2_Intersectin, C2 domain present in Intersectin | Back alignment and domain information |
|---|
| >gnl|CDD|176002 cd04037, C2E_Ferlin, C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
| >gnl|CDD|241503 cd13349, PH-GRAM1_TBC1D8, TBC1 domain family member 8 (TBC1D8; also called Vascular Rab-GAP/TBC-containing protein) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|175981 cd04014, C2_PKC_epsilon, C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
| >gnl|CDD|176047 cd08402, C2B_Synaptotagmin-1, C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
| >gnl|CDD|175992 cd04026, C2_PKC_alpha_gamma, C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
| >gnl|CDD|175985 cd04018, C2C_Ferlin, C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
| >gnl|CDD|176015 cd04050, C2B_Synaptotagmin-like, C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| KOG1032 | 590 | consensus Uncharacterized conserved protein, conta | 99.97 | |
| KOG1032 | 590 | consensus Uncharacterized conserved protein, conta | 99.95 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 99.85 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 99.81 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 99.8 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 99.8 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 99.8 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 99.78 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 99.78 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 99.77 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 99.77 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 99.76 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 99.75 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 99.75 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 99.75 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 99.75 | |
| KOG1030 | 168 | consensus Predicted Ca2+-dependent phospholipid-bi | 99.74 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 99.74 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 99.74 | |
| cd08677 | 118 | C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a | 99.73 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 99.73 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 99.73 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 99.71 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 99.71 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 99.71 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 99.71 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 99.71 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 99.71 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 99.71 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 99.7 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 99.7 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 99.7 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 99.69 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 99.69 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 99.69 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 99.68 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 99.68 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 99.68 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 99.68 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 99.67 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 99.67 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 99.67 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 99.66 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 99.65 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 99.65 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 99.65 | |
| cd04039 | 108 | C2_PSD C2 domain present in Phosphatidylserine dec | 99.65 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 99.65 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 99.65 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 99.64 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 99.64 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 99.64 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 99.64 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 99.63 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 99.63 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 99.63 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 99.63 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 99.62 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 99.61 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 99.61 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 99.61 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 99.61 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 99.6 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 99.6 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 99.6 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.59 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 99.59 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 99.58 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 99.57 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 99.57 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 99.57 | |
| cd08407 | 138 | C2B_Synaptotagmin-13 C2 domain second repeat prese | 99.57 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 99.54 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 99.54 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 99.54 | |
| cd04037 | 124 | C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli | 99.54 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 99.54 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 99.53 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 99.53 | |
| cd08692 | 135 | C2B_Tac2-N C2 domain second repeat found in Tac2-N | 99.53 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 99.52 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 99.52 | |
| cd08410 | 135 | C2B_Synaptotagmin-17 C2 domain second repeat prese | 99.52 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 99.52 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 99.51 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 99.51 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 99.51 | |
| cd04048 | 120 | C2A_Copine C2 domain first repeat in Copine. There | 99.5 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 99.5 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 99.48 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 99.48 | |
| PLN03008 | 868 | Phospholipase D delta | 99.46 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 99.46 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.44 | |
| PF02893 | 69 | GRAM: GRAM domain; InterPro: IPR004182 The GRAM do | 99.42 | |
| cd08686 | 118 | C2_ABR C2 domain in the Active BCR (Breakpoint clu | 99.42 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 99.39 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 99.37 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 99.35 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 99.31 | |
| smart00568 | 61 | GRAM domain in glucosyltransferases, myotubularins | 99.25 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.18 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 99.17 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 99.12 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 99.1 | |
| cd08374 | 133 | C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli | 99.09 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 99.09 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 99.07 | |
| PLN02223 | 537 | phosphoinositide phospholipase C | 99.02 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 98.9 | |
| PLN02270 | 808 | phospholipase D alpha | 98.87 | |
| PLN02230 | 598 | phosphoinositide phospholipase C 4 | 98.82 | |
| PLN02222 | 581 | phosphoinositide phospholipase C 2 | 98.73 | |
| PLN02228 | 567 | Phosphoinositide phospholipase C | 98.68 | |
| KOG1031 | 1169 | consensus Predicted Ca2+-dependent phospholipid-bi | 98.67 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 98.67 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 98.67 | |
| cd08689 | 109 | C2_fungal_Pkc1p C2 domain found in protein kinase | 98.61 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 98.54 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.54 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 98.33 | |
| PLN02352 | 758 | phospholipase D epsilon | 98.12 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 98.1 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 97.96 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 97.67 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.57 | |
| KOG3837 | 523 | consensus Uncharacterized conserved protein, conta | 97.31 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.26 | |
| KOG2060 | 405 | consensus Rab3 effector RIM1 and related proteins, | 97.24 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 97.19 | |
| KOG4347 | 671 | consensus GTPase-activating protein VRP [General f | 97.13 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 97.0 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 96.9 | |
| cd08683 | 143 | C2_C2cd3 C2 domain found in C2 calcium-dependent d | 96.63 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 96.53 | |
| PF12416 | 340 | DUF3668: Cep120 protein; InterPro: IPR022136 This | 95.49 | |
| PF10698 | 159 | DUF2505: Protein of unknown function (DUF2505); In | 95.42 | |
| PF15627 | 156 | CEP76-C2: CEP76 C2 domain | 95.22 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 95.22 | |
| PF10698 | 159 | DUF2505: Protein of unknown function (DUF2505); In | 95.1 | |
| cd08684 | 103 | C2A_Tac2-N C2 domain first repeat found in Tac2-N | 93.66 | |
| PF14470 | 96 | bPH_3: Bacterial PH domain | 93.4 | |
| cd08398 | 158 | C2_PI3K_class_I_alpha C2 domain present in class I | 92.85 | |
| cd08693 | 173 | C2_PI3K_class_I_beta_delta C2 domain present in cl | 92.22 | |
| PF10358 | 143 | NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; | 91.98 | |
| cd08380 | 156 | C2_PI3K_like C2 domain present in phosphatidylinos | 90.19 | |
| cd05018 | 144 | CoxG Carbon monoxide dehydrogenase subunit G (CoxG | 90.07 | |
| cd08397 | 159 | C2_PI3K_class_III C2 domain present in class III p | 90.04 | |
| cd08687 | 98 | C2_PKN-like C2 domain in Protein kinase C-like (PK | 88.55 | |
| cd04012 | 171 | C2A_PI3K_class_II C2 domain first repeat present i | 88.09 | |
| cd08868 | 208 | START_STARD1_3_like Cholesterol-binding START doma | 87.09 | |
| KOG1452 | 442 | consensus Predicted Rho GTPase-activating protein | 86.79 | |
| cd08876 | 195 | START_1 Uncharacterized subgroup of the steroidoge | 86.63 | |
| cd08399 | 178 | C2_PI3K_class_I_gamma C2 domain present in class I | 83.94 | |
| cd05018 | 144 | CoxG Carbon monoxide dehydrogenase subunit G (CoxG | 82.74 | |
| PF14844 | 106 | PH_BEACH: PH domain associated with Beige/BEACH; P | 82.33 | |
| cd07821 | 140 | PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), | 80.46 | |
| cd08876 | 195 | START_1 Uncharacterized subgroup of the steroidoge | 80.29 |
| >KOG1032 consensus Uncharacterized conserved protein, contains GRAM domain [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=301.98 Aligned_cols=296 Identities=21% Similarity=0.313 Sum_probs=216.8
Q ss_pred CCCCcccccceecccccccccCceEEEeccEEEEEeccCCCeEEEEEecccceeeEEccccccccCCCcEEEEEEecCCC
Q 003874 463 LPPEEFLIKDFTCYLKRKMPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKGRGL 542 (790)
Q Consensus 463 lp~~E~l~~~f~C~l~~~i~~~Grlyis~~~icF~s~~~g~~t~~~i~~~dI~~I~k~~~~~~~~~~~~i~i~l~~~~gl 542 (790)
+|+++.|+.+++|++.|.+.+|||||++..++|||+++|||.++.+||+++|.-|+|+. ++|+
T Consensus 117 ~~~~~~l~~~~~cal~reillQGrmyis~~~icF~s~i~gw~~~~vIpf~eI~~ikk~~-----------------tag~ 179 (590)
T KOG1032|consen 117 VPDPEILLTDYSCALQREILLQGRMYISEEHICFNSNIFGWETKVVIPFDEITLIKKTK-----------------TAGI 179 (590)
T ss_pred CCCcceeeeecchhhccccccccccccccceeeecccccCccceeEEeeeeeeeeehhh-----------------hccC
Confidence 88999999999999999999999999999999999999999999999999999999977 3678
Q ss_pred CCCCCceeccCCCceEEEEeeccccchhhHHHHHHHhcc---CCChhhhhhhc---cccccccc----cccccC---CCC
Q 003874 543 DARHGAKSQDEEGRLRFYFQSFVSFNDASRTIMALWRSR---TLTAYQKEQIA---EEQQVQEE----MSTAAD---RGS 609 (790)
Q Consensus 543 ~~~~~~~~~~~~~~~k~~F~sf~~rd~~~~~i~~~w~~~---~ls~~~~~~~~---~~~s~~~~----~~~~e~---s~~ 609 (790)
+||++.|++ +..+|+|+||.+||.+|.+|..+-+.- +.++....... +++...+. ....++ +.+
T Consensus 180 fpn~i~i~t---~~~ky~f~s~~Srda~~~~~~~~~~~~~~~s~s~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~s 256 (590)
T KOG1032|consen 180 FPNAIEITT---GTTKYIFVSLLSRDATYKLIKLLLHKFLDSSGSPRADSDYLSSVEPEVNDDQQGNVDNSQSPSALQNS 256 (590)
T ss_pred CCcceEEec---CCCcceeeecccCccHHHHHHHhhhhcccccCCccccchhcccCCCCcCcccccccccCCCccccccc
Confidence 888877773 346899999999999999764333221 11111111110 00000000 000000 000
Q ss_pred C-CCCCC-----------ccccceeccccCCCHHHHhh-hccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEe
Q 003874 610 V-PNFED-----------AKMSKVYNAELPISVKALME-MFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRF 676 (790)
Q Consensus 610 ~-~~~~d-----------~~~~~v~~~~~p~s~~~lf~-lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~ 676 (790)
+ ...++ ..+.-+.+..+.+++..+|+ ||++..|+..+.+.++..+++..+|.....+...|.++|+.
T Consensus 257 ~~~~~~e~~~~~~~~~~~~~~~v~~~~~~s~~~~~~~~~lf~d~~~~~~~l~~~~~~~vs~~~~~~~~~~~~~r~~~y~~ 336 (590)
T KOG1032|consen 257 FDSPKEEELEHDFSCSLSRLFGVLGRLPFSAPIGAFFSLLFGDNTFFFFFLEDQDEIQVSPIPWKGPRSGILLRTLSYTK 336 (590)
T ss_pred cCCCccccccccccccccccccccccccccccccccceeeccCcceeeeccccccccccccccccCCCccceeEeccCCc
Confidence 0 00000 01222334567899999999 99999999999999999999999999877789999999996
Q ss_pred --cccccCCCceeceEEEEeecCCCCcEEEE-EEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccch
Q 003874 677 --NRHVSIFGGEVTCTQQKSPLASGEGWIVN-EVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKF 753 (790)
Q Consensus 677 --n~~i~~~~~~vt~~Q~~~~~~~~~~~vv~-~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~ 753 (790)
..+++|+.+.+..+|........+++.|. ++.| ++||||++|.|++||+|+|.. .+.|+++|+++|.|.|++|.
T Consensus 337 ~l~~~~gPk~t~~~~~~~l~~~~~~~~~~vls~t~~-~~vps~~~f~v~~~y~i~~~~--~~~~~l~v~~~V~~~~~sw~ 413 (590)
T KOG1032|consen 337 GLPAKSGPKSTDCEGTQTLHHQDLEKYFRVLSETLT-PDVPSGDSFYVKTRYLISRAG--SNSCKLKVSTSVEWTKSSWD 413 (590)
T ss_pred cCCCcCCCccccccceeeEEeccchhhhhhhheecc-CCccccceeeeeEEEEEEecC--CcceeecceeEEEeccCchh
Confidence 56677766666666754444444445555 6666 999999999999999999998 69999999999999999999
Q ss_pred hhhhhhhhH--HhHHHHHHHHHHHHHHHHH
Q 003874 754 QQRITQNIT--EKFTHRLKEMIELVEREIL 781 (790)
Q Consensus 754 K~~Iek~~~--~g~~~~~k~~~~~~~k~v~ 781 (790)
+.+++.++. +.+-+.++.++...++..+
T Consensus 414 ~~~~~~~~~~~k~lv~~~~~~~~~~e~~~~ 443 (590)
T KOG1032|consen 414 VPVSEIGSNTLKDLVEILEKLLENGEELAK 443 (590)
T ss_pred hccccccccchhhHHHHHHHHHhccHHHHH
Confidence 888888775 3444444444443333333
|
|
| >KOG1032 consensus Uncharacterized conserved protein, contains GRAM domain [Function unknown] | Back alignment and domain information |
|---|
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
| >KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
| >cd08677 C2A_Synaptotagmin-13 C2 domain | Back alignment and domain information |
|---|
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
| >cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) | Back alignment and domain information |
|---|
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
| >cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 | Back alignment and domain information |
|---|
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
| >cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
| >cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
| >cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 | Back alignment and domain information |
|---|
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
| >cd04048 C2A_Copine C2 domain first repeat in Copine | Back alignment and domain information |
|---|
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02893 GRAM: GRAM domain; InterPro: IPR004182 The GRAM domain is found in glucosyltransferases, myotubularins and other putative membrane-associated proteins | Back alignment and domain information |
|---|
| >cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
| >smart00568 GRAM domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins | Back alignment and domain information |
|---|
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
| >cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin | Back alignment and domain information |
|---|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN02223 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
| >PLN02230 phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
| >PLN02222 phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
| >PLN02228 Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
| >KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae | Back alignment and domain information |
|---|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN02352 phospholipase D epsilon | Back alignment and domain information |
|---|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4347 consensus GTPase-activating protein VRP [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins | Back alignment and domain information |
|---|
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length | Back alignment and domain information |
|---|
| >PF10698 DUF2505: Protein of unknown function (DUF2505); InterPro: IPR019639 This entry represents proteins found Actinobacteria and Proteobacteria | Back alignment and domain information |
|---|
| >PF15627 CEP76-C2: CEP76 C2 domain | Back alignment and domain information |
|---|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF10698 DUF2505: Protein of unknown function (DUF2505); InterPro: IPR019639 This entry represents proteins found Actinobacteria and Proteobacteria | Back alignment and domain information |
|---|
| >cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
| >PF14470 bPH_3: Bacterial PH domain | Back alignment and domain information |
|---|
| >cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] | Back alignment and domain information |
|---|
| >cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd05018 CoxG Carbon monoxide dehydrogenase subunit G (CoxG) | Back alignment and domain information |
|---|
| >cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins | Back alignment and domain information |
|---|
| >cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd08868 START_STARD1_3_like Cholesterol-binding START domain of mammalian STARD1, -3 and related proteins | Back alignment and domain information |
|---|
| >KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd08876 START_1 Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
| >cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >cd05018 CoxG Carbon monoxide dehydrogenase subunit G (CoxG) | Back alignment and domain information |
|---|
| >PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C | Back alignment and domain information |
|---|
| >cd07821 PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins | Back alignment and domain information |
|---|
| >cd08876 START_1 Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 790 | ||||
| 3hn8_A | 296 | Crystal Structure Of Synaptotagmin Length = 296 | 2e-05 | ||
| 1dqv_A | 296 | Crystal Structure Of Synaptotagmin Iii C2aC2B Lengt | 2e-05 |
| >pdb|3HN8|A Chain A, Crystal Structure Of Synaptotagmin Length = 296 | Back alignment and structure |
|
| >pdb|1DQV|A Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length = 296 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-20
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 290 GSDHGVKAQGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQW 349
GS VK G +L V +++ +L +++ +G SDP+ + + + +P+W
Sbjct: 4 GSSGDVKDVG---ILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEW 60
Query: 350 HDILEFDAMEEPPSVLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLA 409
+ + F +++ VL+V VFD D LG I L L+ K
Sbjct: 61 NKVFTFP-IKDIHDVLEVTVFDED-GDKPPDFLGKVAIP-LLSIRDG-QPNCYVLKNKDL 116
Query: 410 QSAQS-KVHLRIFLENN 425
+ A ++L + L N
Sbjct: 117 EQAFKGVIYLEMDLIYN 133
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 | Back alignment and structure |
|---|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 | Back alignment and structure |
|---|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 | Back alignment and structure |
|---|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 | Back alignment and structure |
|---|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 | Back alignment and structure |
|---|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 | Back alignment and structure |
|---|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 | Back alignment and structure |
|---|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 | Back alignment and structure |
|---|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 | Back alignment and structure |
|---|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 | Back alignment and structure |
|---|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 | Back alignment and structure |
|---|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 | Back alignment and structure |
|---|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 | Back alignment and structure |
|---|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 | Back alignment and structure |
|---|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 | Back alignment and structure |
|---|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 | Back alignment and structure |
|---|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 | Back alignment and structure |
|---|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 | Back alignment and structure |
|---|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 | Back alignment and structure |
|---|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 | Back alignment and structure |
|---|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 | Back alignment and structure |
|---|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540 | Back alignment and structure |
|---|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 | Back alignment and structure |
|---|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 | Back alignment and structure |
|---|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 | Back alignment and structure |
|---|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 | Back alignment and structure |
|---|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 | Back alignment and structure |
|---|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 | Back alignment and structure |
|---|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} Length = 138 | Back alignment and structure |
|---|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B Length = 510 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 99.81 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 99.8 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 99.8 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 99.79 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 99.78 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 99.78 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 99.77 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 99.76 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 99.76 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 99.74 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 99.73 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 99.71 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 99.71 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 99.7 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 99.7 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 99.7 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 99.69 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 99.69 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 99.68 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 99.68 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 99.68 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 99.68 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 99.67 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 99.67 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 99.67 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 99.67 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 99.66 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 99.66 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 99.64 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 99.64 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 99.64 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 99.64 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.63 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 99.62 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 99.6 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 99.57 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.56 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 99.48 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 99.48 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 99.47 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.47 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.45 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 99.43 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.33 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 99.28 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.17 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 98.98 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 98.96 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 98.94 | |
| 1yrk_A | 126 | NPKC-delta, protein kinase C, delta type; C2 domai | 98.74 | |
| 2enj_A | 138 | NPKC-theta, protein kinase C theta type; beta-sand | 98.62 | |
| 2pcs_A | 162 | Conserved protein; structural genomics, unknown fu | 89.9 | |
| 2ns9_A | 157 | Hypothetical protein APE2225; uncharacterized cons | 85.89 | |
| 2qim_A | 158 | PR10.2B; trans-zeatin, cytokinin, plant hormones, | 81.71 | |
| 1em2_A | 229 | MLN64 protein; beta barrel, lipid binding protein; | 80.94 | |
| 1em2_A | 229 | MLN64 protein; beta barrel, lipid binding protein; | 80.82 | |
| 3qsz_A | 189 | STAR-related lipid transfer protein; structural ge | 80.66 | |
| 1icx_A | 155 | Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, | 80.32 | |
| 2cay_A | 145 | VPS36 PH domain, vacuolar protein sorting protein | 80.25 |
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=168.85 Aligned_cols=125 Identities=22% Similarity=0.310 Sum_probs=110.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecC---CCCeEEEEEEeeCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEE---PPSVLDVEVFDFDGPF 376 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~---~~~~L~v~V~D~d~~~ 376 (790)
..|.|.|+|++|+||+..+. |.+||||++++++++++|+++++++||.|||+|.|.+..+ ....|.|+|||+|. +
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-~ 82 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-I 82 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC-S
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC-C
Confidence 45799999999999999998 9999999999999999999999999999999999998543 46899999999998 8
Q ss_pred CCCCccccEEEeceecCCCCceeEEEE---ccccccCcCCceeEEEEEEecCC
Q 003874 377 DQATSLGHAEINFLKHTSTELADMWVS---LEGKLAQSAQSKVHLRIFLENNN 426 (790)
Q Consensus 377 ~~dd~LG~~~i~L~~l~~~~~~~~w~~---L~~k~~~~~~G~l~L~i~l~~~~ 426 (790)
++|++||++.+++..+..+...+.|++ |.+..+....|+|+|++.+.+..
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 899999999999999988888899988 66554445579999999776543
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
| >1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A | Back alignment and structure |
|---|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10 | Back alignment and structure |
|---|
| >2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10 | Back alignment and structure |
|---|
| >2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A | Back alignment and structure |
|---|
| >1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2 | Back alignment and structure |
|---|
| >1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2 | Back alignment and structure |
|---|
| >3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV} | Back alignment and structure |
|---|
| >1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A | Back alignment and structure |
|---|
| >2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 790 | ||||
| d1a25a_ | 132 | b.7.1.2 (A:) C2 domain from protein kinase c (beta | 1e-12 | |
| d2bwqa1 | 125 | b.7.1.2 (A:729-853) Regulating synaptic membrane e | 9e-12 | |
| d1bdya_ | 123 | b.7.1.1 (A:) Domain from protein kinase C delta {R | 3e-11 | |
| d2ep6a1 | 126 | b.7.1.1 (A:92-217) Multiple C2 and transmembrane d | 1e-10 | |
| d1rlwa_ | 126 | b.7.1.1 (A:) Domain from cytosolic phospholipase A | 1e-10 | |
| d1qasa2 | 131 | b.7.1.1 (A:626-756) PI-specific phospholipase C is | 4e-10 | |
| d1gmia_ | 136 | b.7.1.1 (A:) Domain from protein kinase C epsilon | 2e-09 | |
| d1rsya_ | 143 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 2e-09 | |
| d1wfja_ | 136 | b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr | 5e-09 | |
| d2cjta1 | 128 | b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus no | 5e-08 | |
| d1rh8a_ | 142 | b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax | 4e-07 | |
| d2nq3a1 | 133 | b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itc | 5e-07 | |
| d1uowa_ | 157 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 4e-05 | |
| d1w15a_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi | 4e-05 | |
| d1wfma_ | 138 | b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapie | 5e-05 | |
| d1dqva2 | 145 | b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus | 5e-05 | |
| d1ugka_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens | 5e-04 | |
| d2cm5a1 | 137 | b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( | 8e-04 |
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.6 bits (154), Expect = 1e-12
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 288 RKGSDHGVKAQGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQL 342
R+G + ++A D VL V + + NL + GLSDPYV + +
Sbjct: 2 RRGRIY-IQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIK 60
Query: 343 QTCDPQWHDILEFDAME-EPPSVLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMW 401
+ +P+W++ F E + L VE++D+D + +G + D W
Sbjct: 61 CSLNPEWNETFRFQLKESDKDRRLSVEIWDWD-LTSRNDFMGSLSFG-ISELQKAGVDGW 118
Query: 402 VSLEGK 407
L +
Sbjct: 119 FKLLSQ 124
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 123 | Back information, alignment and structure |
|---|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 | Back information, alignment and structure |
|---|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 | Back information, alignment and structure |
|---|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 | Back information, alignment and structure |
|---|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 | Back information, alignment and structure |
|---|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128 | Back information, alignment and structure |
|---|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 | Back information, alignment and structure |
|---|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 | Back information, alignment and structure |
|---|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145 | Back information, alignment and structure |
|---|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 99.82 | |
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 99.77 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 99.76 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 99.76 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 99.73 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.7 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 99.69 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 99.68 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.67 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.65 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 99.64 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 99.6 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 99.6 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 99.59 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 99.57 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.54 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 99.54 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.44 | |
| d1bdya_ | 123 | Domain from protein kinase C delta {Rat (Rattus no | 99.42 | |
| d2zkmx2 | 122 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.23 | |
| d1e7ua2 | 174 | Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) | 85.03 | |
| d2pcsa1 | 147 | Hypothetical protein GKP20 {Geobacillus kaustophil | 82.84 | |
| d2d4ra1 | 146 | Hypothetical protein TTHA0849 {Thermus thermophilu | 82.38 |
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=5.2e-20 Score=169.97 Aligned_cols=119 Identities=24% Similarity=0.407 Sum_probs=104.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~d 379 (790)
+.|.|+|+|++|+||++++..|.+||||++++++++++|++++++.||.|||+|.|.+ .++...|.|+|||++. +++|
T Consensus 4 ~~G~L~V~v~~A~~L~~~d~~g~~Dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~v-~~~~~~L~i~V~d~~~-~~~d 81 (126)
T d2ep6a1 4 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPI-KDIHDVLEVTVFDEDG-DKPP 81 (126)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEE-SCTTCEEEEEEEEEET-TEEE
T ss_pred ccEEEEEEEEEeECCCCCCCCCCcCeEEEEEcCCeEEEEEeeCCceeEEEEEEEEEEE-eccCceeEEEEEEccC-CcCc
Confidence 4589999999999999999999999999999999999999999999999999999998 4556889999999998 8899
Q ss_pred CccccEEEeceecCCCCceeEEEEcccccc-CcCCceeEEEEEE
Q 003874 380 TSLGHAEINFLKHTSTELADMWVSLEGKLA-QSAQSKVHLRIFL 422 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~~~~~~w~~L~~k~~-~~~~G~l~L~i~l 422 (790)
++||++.++|..+..+. ..|+.|..+.. ....|.|+|++.+
T Consensus 82 ~~lG~~~i~l~~l~~~~--~~~~~l~~~~~~~~~~G~i~l~~~~ 123 (126)
T d2ep6a1 82 DFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDL 123 (126)
T ss_dssp EECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred ceEEEEEEEHHHCCCCC--ceEEEccccCCCCceeEEEEEEEEE
Confidence 99999999999986654 47998876532 3456999999854
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]} | Back information, alignment and structure |
|---|
| >d2d4ra1 d.129.3.6 (A:2-147) Hypothetical protein TTHA0849 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|