Citrus Sinensis ID: 003875
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | 2.2.26 [Sep-21-2011] | |||||||
| P53536 | 1003 | Alpha-1,4 glucan phosphor | N/A | no | 0.989 | 0.779 | 0.789 | 0.0 | |
| P27598 | 955 | Alpha-1,4 glucan phosphor | N/A | no | 0.967 | 0.8 | 0.791 | 0.0 | |
| P04045 | 966 | Alpha-1,4 glucan phosphor | N/A | no | 0.969 | 0.792 | 0.777 | 0.0 | |
| Q9LIB2 | 962 | Alpha-glucan phosphorylas | yes | no | 0.945 | 0.776 | 0.778 | 0.0 | |
| P53535 | 974 | Alpha-1,4 glucan phosphor | N/A | no | 0.978 | 0.793 | 0.743 | 0.0 | |
| Q9SD76 | 841 | Alpha-glucan phosphorylas | no | no | 0.511 | 0.480 | 0.665 | 1e-165 | |
| P53537 | 842 | Alpha-glucan phosphorylas | N/A | no | 0.529 | 0.496 | 0.646 | 1e-164 | |
| P32811 | 838 | Alpha-glucan phosphorylas | N/A | no | 0.507 | 0.478 | 0.646 | 1e-163 | |
| Q9LKJ3 | 832 | Alpha-glucan phosphorylas | N/A | no | 0.507 | 0.481 | 0.641 | 1e-162 | |
| Q00766 | 853 | Glycogen phosphorylase 1 | yes | no | 0.497 | 0.460 | 0.501 | 1e-115 |
| >sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1306 bits (3380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/793 (78%), Positives = 705/793 (88%), Gaps = 11/793 (1%)
Query: 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 60
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDVSYPV+FYGK+
Sbjct: 217 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVSYPVRFYGKV 276
Query: 61 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 120
V GSDGK HW+GGEDIKAVA+D+PIPGYKT++TINLRLWST SE+FDL+AFN+G HT+
Sbjct: 277 VSGSDGKKHWVGGEDIKAVAHDVPIPGYKTRSTINLRLWSTKAASEEFDLNAFNSGRHTE 336
Query: 121 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 180
A+EAL NAEKICYILYPGDES+EGK LRLKQQYTLCSASLQDIIARFE+RSGA+VNWE+F
Sbjct: 337 ASEALANAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFERRSGASVNWEDF 396
Query: 181 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240
PEKVAVQMNDTHPTLCIPEL+RILID+KGLSWK+AWNITQRTVAYTNHTVLPEALEKWS
Sbjct: 397 PEKVAVQMNDTHPTLCIPELMRILIDIKGLSWKDAWNITQRTVAYTNHTVLPEALEKWSM 456
Query: 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLF 300
+LM+KLLPRH+EIIEMIDEEL+ TI++EYGTAD DLL+K+LKE RILENV+LPA FAD+
Sbjct: 457 DLMEKLLPRHVEIIEMIDEELIRTIIAEYGTADSDLLDKKLKEMRILENVELPAEFADIL 516
Query: 301 VKTKESTDVVPDD---ELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENC-DE 356
VKTKE+TD+ ++ E +EE + E +++ E D +DE+E E
Sbjct: 517 VKTKEATDISSEEVQISKEGGEEEETSKEGGEEEEEKEVGGGREEGDDGKEDEVEKAIAE 576
Query: 357 EGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTN 416
+ G V + +++ K E V PP+LVRMANLCVVG HAVNGVAEIHSEIV +
Sbjct: 577 KDGTVKSSIGDKKK-------KLPEPVPVPPKLVRMANLCVVGGHAVNGVAEIHSEIVKD 629
Query: 417 EVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKF 476
+VFN FYKLWPEKFQNKTNGVTPRRWIRFCNPDLS I+T W+GTEDW+ NT KLAELRKF
Sbjct: 630 DVFNAFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITQWIGTEDWILNTEKLAELRKF 689
Query: 477 ADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIV 536
ADNEDLQ+Q+R AKRNNK+KV +F++E+TGYSVSPD+MFDIQVKRIHEYKRQL+NI GIV
Sbjct: 690 ADNEDLQTQWREAKRNNKVKVAAFLRERTGYSVSPDSMFDIQVKRIHEYKRQLLNIFGIV 749
Query: 537 YRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 596
YRYKKMKEM+A ERK FVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL
Sbjct: 750 YRYKKMKEMNAAERKENFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 809
Query: 597 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 656
KVIFVPDYNVSVAE+LIPASELSQHISTAGMEASGTSNMKFAMNGC+ IGTLDGANVEIR
Sbjct: 810 KVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCLQIGTLDGANVEIR 869
Query: 657 QEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSL 716
+EVG +NFFLFGA+A EI GLRKER+ GKFVPD RFEEVKKFV+SGVFGSYNYDEL+GSL
Sbjct: 870 EEVGADNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSL 929
Query: 717 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQE 776
EGNEGFG+ADYFLVG+DFPSYLECQE+VD+AY DQK+WTRMSI+NTAGSSKFSSDRTI E
Sbjct: 930 EGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHE 989
Query: 777 YARDIWNIIPVEL 789
YAR+IWNI PV+L
Sbjct: 990 YAREIWNIEPVKL 1002
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The L isoform exhibits higher affinity for unbranched substrates such as glucan-like amylose and maltodextrin. Vicia faba (taxid: 3906) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1 |
| >sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1 | Back alignment and function description |
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| >sp|P04045|PHSL1_SOLTU Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic OS=Arabidopsis thaliana GN=PHS2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1 | Back alignment and function description |
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| >sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| 255570250 | 977 | glycogen phosphorylase, putative [Ricinu | 0.970 | 0.785 | 0.803 | 0.0 | |
| 224077696 | 949 | predicted protein [Populus trichocarpa] | 0.984 | 0.819 | 0.794 | 0.0 | |
| 2506470 | 1003 | RecName: Full=Alpha-1,4 glucan phosphory | 0.989 | 0.779 | 0.789 | 0.0 | |
| 356551144 | 978 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.964 | 0.779 | 0.805 | 0.0 | |
| 130172 | 955 | RecName: Full=Alpha-1,4 glucan phosphory | 0.967 | 0.8 | 0.791 | 0.0 | |
| 359489019 | 982 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.974 | 0.784 | 0.803 | 0.0 | |
| 211906528 | 935 | alpha-1,4 glucan phosphorylase [Gossypiu | 0.981 | 0.828 | 0.793 | 0.0 | |
| 356573281 | 922 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.965 | 0.827 | 0.802 | 0.0 | |
| 228312 | 955 | starch phosphorylase | 0.967 | 0.8 | 0.788 | 0.0 | |
| 130173 | 966 | RecName: Full=Alpha-1,4 glucan phosphory | 0.969 | 0.792 | 0.777 | 0.0 |
| >gi|255570250|ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus communis] gi|223534582|gb|EEF36279.1| glycogen phosphorylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/792 (80%), Positives = 699/792 (88%), Gaps = 25/792 (3%)
Query: 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 60
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDV+YPVKFYGK+
Sbjct: 209 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVAYPVKFYGKV 268
Query: 61 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 120
V GSDG+ HWIGGEDIKAVAYD+PIPGYKTK+TINLRLWST P+ED DLSAFN+GDHTK
Sbjct: 269 VSGSDGRKHWIGGEDIKAVAYDVPIPGYKTKSTINLRLWSTKAPAEDLDLSAFNSGDHTK 328
Query: 121 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 180
A E L NAEKIC+ILYPGD+SVEGK+LRLKQQYTLCSASLQDII RFE+RSG++V WEEF
Sbjct: 329 AYETLANAEKICHILYPGDDSVEGKILRLKQQYTLCSASLQDIIVRFERRSGSHVKWEEF 388
Query: 181 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240
PEKVAVQMNDTHPTLCIPEL+RIL+DLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS
Sbjct: 389 PEKVAVQMNDTHPTLCIPELMRILMDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSL 448
Query: 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLF 300
+LMQKLLPRH+EIIEMIDEEL+ TIVSEYG D DLL K+LKE RILENVDLP FADL
Sbjct: 449 DLMQKLLPRHVEIIEMIDEELIRTIVSEYGREDLDLLNKKLKEMRILENVDLPDAFADLI 508
Query: 301 VKTKESTDVVPDDELENCDEEGGPVDE--ELESAQEDGVLEEESTDVVPDDELENCDEEG 358
+KTKES+ E E+ D+E V+E ELES +E E + DELEN + +
Sbjct: 509 IKTKESSAASTTKEPEDADDEIKLVNEKDELESKEES----ENKDEAERKDELENKNTQ- 563
Query: 359 GPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEV 418
+KE V+ PP++VRMANLCVVG HAVNGVAEIHSEIV +EV
Sbjct: 564 ------------------KKEKAVVEPPPKMVRMANLCVVGGHAVNGVAEIHSEIVKDEV 605
Query: 419 FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFAD 478
FN FY+LWP+KFQNKTNGVTPRRWIRFCNPDLS I+T W G+EDWV NT KLAELRKF+D
Sbjct: 606 FNVFYQLWPKKFQNKTNGVTPRRWIRFCNPDLSKIITDWTGSEDWVLNTEKLAELRKFSD 665
Query: 479 NEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYR 538
NEDLQ+Q+RAAKR+NKMKVV IKEKTGYSVS DAMFDIQVKRIHEYKRQL+NILGIVYR
Sbjct: 666 NEDLQTQWRAAKRSNKMKVVQLIKEKTGYSVSTDAMFDIQVKRIHEYKRQLLNILGIVYR 725
Query: 539 YKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKV 598
YKKMKEMSA ERK ++VPRVCIFGGKAFATY+QAKRIVKFITDVGATVNHDPEIGDLLKV
Sbjct: 726 YKKMKEMSAAERKKEYVPRVCIFGGKAFATYLQAKRIVKFITDVGATVNHDPEIGDLLKV 785
Query: 599 IFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 658
+FVP+YNVSVAELLIPASELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+E
Sbjct: 786 VFVPNYNVSVAELLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIRKE 845
Query: 659 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEG 718
VGE+NFFLFGA+AHEIAGLRKER+EGKFVPD RFEEVK+FV+SGVFG+Y+YDEL+GSLEG
Sbjct: 846 VGEDNFFLFGAKAHEIAGLRKERAEGKFVPDPRFEEVKEFVRSGVFGTYDYDELLGSLEG 905
Query: 719 NEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 778
NEGFG+ DYFLVGKDFPSYLECQEKVD+AY DQKRWT+MSIMNTAGS FSSDRTI EYA
Sbjct: 906 NEGFGRGDYFLVGKDFPSYLECQEKVDKAYRDQKRWTKMSIMNTAGSYYFSSDRTIHEYA 965
Query: 779 RDIWNIIPVELP 790
RDIWNI PV LP
Sbjct: 966 RDIWNIEPVILP 977
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077696|ref|XP_002305367.1| predicted protein [Populus trichocarpa] gi|222848331|gb|EEE85878.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|2506470|sp|P53536.2|PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|1616637|emb|CAA85354.1| alpha-1,4 glucan phosphorylase, L isoform precursor [Vicia faba var. minor] | Back alignment and taxonomy information |
|---|
| >gi|356551144|ref|XP_003543938.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|130172|sp|P27598.1|PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|168276|gb|AAA63271.1| starch phosphorylase [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
| >gi|359489019|ref|XP_002279075.2| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Vitis vinifera] gi|296082990|emb|CBI22291.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|211906528|gb|ACJ11757.1| alpha-1,4 glucan phosphorylase [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|356573281|ref|XP_003554791.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|228312|prf||1802404A starch phosphorylase | Back alignment and taxonomy information |
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| >gi|130173|sp|P04045.2|PHSL1_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-1; Flags: Precursor gi|217999|dbj|BAA00407.1| alpha-glucan phosphorylase precursor [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| UNIPROTKB|P04045 | 966 | P04045 "Alpha-1,4 glucan phosp | 0.506 | 0.414 | 0.865 | 0.0 | |
| UNIPROTKB|P53535 | 974 | STP-1 "Alpha-1,4 glucan phosph | 0.508 | 0.412 | 0.840 | 0.0 | |
| TAIR|locus:2093787 | 962 | PHS1 "alpha-glucan phosphoryla | 0.508 | 0.417 | 0.858 | 0.0 | |
| TAIR|locus:2075576 | 841 | PHS2 "alpha-glucan phosphoryla | 0.507 | 0.476 | 0.669 | 1.2e-245 | |
| DICTYBASE|DDB_G0281383 | 853 | glpV "glycogen phosphorylase b | 0.497 | 0.460 | 0.503 | 1.6e-184 | |
| ASPGD|ASPL0000059322 | 879 | AN1015 [Emericella nidulans (t | 0.497 | 0.447 | 0.501 | 1.1e-181 | |
| UNIPROTKB|G4MW66 | 888 | MGG_01819 "Phosphorylase" [Mag | 0.5 | 0.444 | 0.485 | 1.2e-179 | |
| DICTYBASE|DDB_G0291123 | 993 | glpD "glycogen phosphorylase a | 0.486 | 0.386 | 0.489 | 1.9e-179 | |
| CGD|CAL0001970 | 900 | GPH1 [Candida albicans (taxid: | 0.496 | 0.435 | 0.474 | 1.6e-169 | |
| UNIPROTKB|Q5AFP7 | 900 | GPH1 "Phosphorylase" [Candida | 0.496 | 0.435 | 0.474 | 1.6e-169 |
| UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 346/400 (86%), Positives = 376/400 (94%)
Query: 390 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 449
VRMANLCVVG HAVNGVAEIHSEIV EVFN+FY+LWPEKFQNKTNGVTPRRWIRFCNP
Sbjct: 566 VRMANLCVVGGHAVNGVAEIHSEIVKEEVFNDFYELWPEKFQNKTNGVTPRRWIRFCNPP 625
Query: 450 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 509
LS+I+T W GTEDWV T KLAEL+KFADNEDLQ+++R AKR+NK+KVVSF+KEKTGYSV
Sbjct: 626 LSAIITKWTGTEDWVLKTEKLAELQKFADNEDLQNEWREAKRSNKIKVVSFLKEKTGYSV 685
Query: 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 569
PDAMFDIQVKRIHEYKRQL+NI GIVYRYKKMKEM+A ERK FVPRVCIFGGKAFATY
Sbjct: 686 VPDAMFDIQVKRIHEYKRQLLNIFGIVYRYKKMKEMTAAERKTNFVPRVCIFGGKAFATY 745
Query: 570 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 629
VQAKRIVKFITDVGAT+NHDPEIGDLLKV+FVPDYNVSVAELLIPAS+LS+HISTAGMEA
Sbjct: 746 VQAKRIVKFITDVGATINHDPEIGDLLKVVFVPDYNVSVAELLIPASDLSEHISTAGMEA 805
Query: 630 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 689
SGTSNMKFAMNGCI IGTLDGANVEIR+EVGEENFFLFGA+AHEIAGLRKER++GKFVPD
Sbjct: 806 SGTSNMKFAMNGCIQIGTLDGANVEIREEVGEENFFLFGAQAHEIAGLRKERADGKFVPD 865
Query: 690 ARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 749
RFEEVK+FV+SG FGSYNYD+L+GSLEGNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY
Sbjct: 866 ERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYR 925
Query: 750 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 789
DQKRWT MSI+NTAGS KFSSDRTI EYA+DIWNI VE+
Sbjct: 926 DQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNIEAVEI 965
|
|
| UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5AFP7 GPH1 "Phosphorylase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P27598 | PHSL_IPOBA | 2, ., 4, ., 1, ., 1 | 0.7911 | 0.9670 | 0.8 | N/A | no |
| Q9LIB2 | PHS1_ARATH | 2, ., 4, ., 1, ., 1 | 0.7784 | 0.9455 | 0.7765 | yes | no |
| P53535 | PHSL2_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7430 | 0.9784 | 0.7936 | N/A | no |
| P53536 | PHSL_VICFA | 2, ., 4, ., 1, ., 1 | 0.7894 | 0.9898 | 0.7796 | N/A | no |
| P04045 | PHSL1_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7772 | 0.9696 | 0.7929 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.1 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 790 | |||
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 0.0 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 0.0 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 0.0 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 1e-144 | |
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 1e-142 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 1e-141 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 1e-137 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 1e-130 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 1e-128 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 6e-77 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 6e-77 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 7e-76 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 3e-18 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 8e-12 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 7e-10 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 2e-06 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 0.003 |
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Score = 654 bits (1689), Expect = 0.0
Identities = 210/409 (51%), Positives = 273/409 (66%), Gaps = 23/409 (5%)
Query: 385 EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIR 444
+ VRMA+L +VGSH+VNGVA +HSE++ VF +FY+L+PEKF NKTNG+TPRRW+
Sbjct: 403 GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLL 462
Query: 445 FCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK 504
NP LS+++T +G +DWVT+ +L +L FAD+ +FRA K+ NK ++ ++IK+
Sbjct: 463 QANPGLSALITETIG-DDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKT 521
Query: 505 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 564
TG V PD++FD+QVKRIHEYKRQL+N+L I++ Y ++KE A VPR IFGGK
Sbjct: 522 TGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENP----NADIVPRTFIFGGK 577
Query: 565 AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 624
A Y AK I+K I V VN+DP++GD LKV+F+P+YNVS+AE +IPA++LS+ IST
Sbjct: 578 AAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQIST 637
Query: 625 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG 684
AG EASGT NMKF +NG + IGTLDGANVEI +EVGEEN F+FG A E+ LR
Sbjct: 638 AGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYP 697
Query: 685 KFV--PDARFEEVKKFVKSGVFGSYN-------YDELMGSLEGNEGFGQADYFLVGKDFP 735
D V + SG F + D L L GN D +LV DF
Sbjct: 698 ADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSL---LNGN------DEYLVLADFE 748
Query: 736 SYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 784
SY++ QEKVD Y DQ+ W R SI+N A S KFSSDRTI+EYA DIWN+
Sbjct: 749 SYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 797 |
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| KOG2099 | 843 | consensus Glycogen phosphorylase [Carbohydrate tra | 100.0 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 100.0 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 100.0 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 100.0 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 100.0 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 100.0 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.77 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.71 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.63 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.6 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.34 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.3 | |
| PLN02316 | 1036 | synthase/transferase | 98.73 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 97.73 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 97.1 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 97.05 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 97.01 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 97.0 | |
| PLN00142 | 815 | sucrose synthase | 96.94 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 96.93 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 96.91 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 96.9 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 96.77 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 96.75 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 96.7 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 96.64 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 96.61 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 96.42 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 96.35 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 96.25 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 96.22 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 96.2 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 96.18 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 96.18 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 96.07 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 96.04 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 95.9 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 95.86 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 95.77 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 95.73 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 95.59 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 95.44 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 95.34 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 95.32 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 95.31 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 95.21 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 94.93 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 94.79 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 94.76 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 94.56 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 94.25 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 94.23 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 93.49 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 93.46 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 93.44 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 93.29 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 93.12 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 92.52 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 92.4 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 91.83 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 90.92 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 90.7 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 90.27 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 89.45 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 89.36 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 87.58 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 86.36 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 81.97 |
| >KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-246 Score=1983.76 Aligned_cols=678 Identities=55% Similarity=0.967 Sum_probs=657.0
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|+|||||||+||+|+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|
T Consensus 148 MATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~ 226 (843)
T KOG2099|consen 148 MATLGLPAYGYGLRYEYGIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMP 226 (843)
T ss_pred HhhcCCccccccceeehhhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEec
Confidence 899999999999999999999999999999999999999999999999999999999999988888 5799999999999
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|++||+||||+|+ ++++|||..||.|||.+|+.+++.+|+||.||||||+..+||+||||||||+|+|||
T Consensus 227 YD~PvPGyk~n~vntlRLWsak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtL 305 (843)
T KOG2099|consen 227 YDTPVPGYKNNTVNTLRLWSAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATL 305 (843)
T ss_pred cCCCCCCcccCcceeeeeeccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHH
Confidence 9999999999999999999999 777999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcc-----cccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccc
Q 003875 161 QDIIARFEKRSGAN-----VNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 235 (790)
Q Consensus 161 qdiirrf~~~~gG~-----~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpeal 235 (790)
|||||||+++.+|. .+|++||+|++||||||||+||||||||+|||.+||+|++||+||++||+|||||+|||||
T Consensus 306 qDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEAL 385 (843)
T KOG2099|consen 306 QDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEAL 385 (843)
T ss_pred HHHHHHHhhcccCcccccccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHH
Confidence 99999999888763 3599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccc
Q 003875 236 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDEL 315 (790)
Q Consensus 236 Ekw~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (790)
|+||++||++||||||||||+||.+|++.+.++||+ |.+++++||||+
T Consensus 386 ErWp~~L~e~LLPRHleIIy~In~~~l~~i~~~fp~-----D~drlrrmsiie--------------------------- 433 (843)
T KOG2099|consen 386 ERWPVSLMEKLLPRHLEIIYEINQRFLQTVAAKFPG-----DVDRLRRMSIIE--------------------------- 433 (843)
T ss_pred HHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCC-----cHHHHhhhhhhh---------------------------
Confidence 999999999999999999999999999999999998 999999999988
Q ss_pred ccccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeee
Q 003875 316 ENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANL 395 (790)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~L 395 (790)
++ ++++++|||+|
T Consensus 434 -----------------------------------------------------------------e~--~~~k~i~MA~L 446 (843)
T KOG2099|consen 434 -----------------------------------------------------------------EN--SPEKRINMAHL 446 (843)
T ss_pred -----------------------------------------------------------------cC--Cccceeeeeee
Confidence 20 24579999999
Q ss_pred eeccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhh
Q 003875 396 CVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRK 475 (790)
Q Consensus 396 al~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~ 475 (790)
||+|||+|||||+|||+|+|+.+|+||+++||+||+||||||||||||.+|||.|++||+++||+ +|++|+++|.+|++
T Consensus 447 ~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige-~~i~dl~~l~~L~~ 525 (843)
T KOG2099|consen 447 CIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGE-EWITDLDQLTKLRK 525 (843)
T ss_pred eeecccccccHHHHHHHHHHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhh-HhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999995 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhcccc
Q 003875 476 FADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFV 555 (790)
Q Consensus 476 ~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~ 555 (790)
+++|++|+++|+++|++||.+|++||++.+|+.++|+||||+|||||||||||+|||||+|+||++||+ +|. +.++
T Consensus 526 ~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fv 601 (843)
T KOG2099|consen 526 FADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFV 601 (843)
T ss_pred hcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 555 4489
Q ss_pred CeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccc
Q 003875 556 PRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNM 635 (790)
Q Consensus 556 P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnM 635 (790)
||++||||||+|+|+|||.|||||++||++|||||.|+++|||||||||+||+||+||||+|||+||||||+||||||||
T Consensus 602 prtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NM 681 (843)
T KOG2099|consen 602 PRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNM 681 (843)
T ss_pred ceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCCcc---HH
Q 003875 636 KFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YD 710 (790)
Q Consensus 636 KfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~~~i~~g~f~~~~---~~ 710 (790)
||||||||+|||||||||||+||+|+||+||||+++++|..|++++ ....|.++|++++|+++|.+|.|++++ |+
T Consensus 682 KF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fk 761 (843)
T KOG2099|consen 682 KFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFK 761 (843)
T ss_pred eEEecCeEEEecccccchHHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHH
Confidence 9999999999999999999999999999999999999999999996 334578999999999999999999876 88
Q ss_pred HHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccccCCC
Q 003875 711 ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 790 (790)
Q Consensus 711 ~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p~~~p 790 (790)
+|.++|.++ |+|+|++||+||++||++|++.|+|+++|++|+|+|||.||+|||||||.|||++||+|+|++.|
T Consensus 762 d~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 762 DIVNMLMYH------DYFLVFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred HHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 999999864 99999999999999999999999999999999999999999999999999999999999998865
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 790 | ||||
| 1qm5_A | 796 | Phosphorylase Recognition And Phosphorylysis Of Its | 1e-102 | ||
| 1l5v_A | 796 | Crystal Structure Of The Maltodextrin Phosphorylase | 1e-102 | ||
| 2qll_A | 847 | Human Liver Glycogen Phosphorylase- Gl Complex Leng | 1e-101 | ||
| 1fc0_A | 846 | Human Liver Glycogen Phosphorylase Complexed With N | 1e-101 | ||
| 1xoi_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1fa9_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1em6_A | 847 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1z8d_A | 842 | Crystal Structure Of Human Muscle Glycogen Phosphor | 1e-101 | ||
| 2zb2_A | 849 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 3dds_A | 848 | Crystal Structure Of Glycogen Phosphorylase Complex | 1e-101 | ||
| 3ceh_A | 809 | Human Liver Glycogen Phosphorylase (Tense State) In | 1e-101 | ||
| 2ecp_A | 796 | The Crystal Structure Of The E. Coli Maltodextrin P | 1e-100 | ||
| 1ahp_A | 797 | Oligosaccharide Substrate Binding In Escherichia Co | 1e-100 | ||
| 1c50_A | 830 | Identification And Structural Characterization Of A | 1e-100 | ||
| 1gpa_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 1abb_A | 828 | Control Of Phosphorylase B Conformation By A Modifi | 1e-100 | ||
| 7gpb_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 1c8l_A | 842 | Synergistic Inhibition Of Glycogen Phosphorylase A | 1e-100 | ||
| 2gm9_A | 825 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 2ffr_A | 825 | Crystallographic Studies On N-Azido-Beta-D-Glucopyr | 1e-100 | ||
| 2gj4_A | 824 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 1pyg_A | 842 | Structural Basis For The Activation Of Glycogen Pho | 1e-100 | ||
| 1noi_A | 842 | Complex Of Glycogen Phosphorylase With A Transition | 1e-100 | ||
| 1z6p_A | 842 | Glycogen Phosphorylase Amp Site Inhibitor Complex L | 1e-100 | ||
| 2pyd_A | 843 | The Crystal Structure Of Glycogen Phosphorylase In | 1e-100 | ||
| 3nc4_A | 841 | The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz | 1e-100 | ||
| 4ej2_A | 825 | Crystal Structure Of Gpb In Complex With Dk10 Lengt | 1e-100 | ||
| 2g9q_A | 842 | The Crystal Structure Of The Glycogen Phosphorylase | 1e-100 | ||
| 1ygp_B | 879 | Phosphorylated Form Of Yeast Glycogen Phosphorylase | 5e-97 | ||
| 2c4m_A | 796 | Starch Phosphorylase: Structural Studies Explain Ox | 1e-95 |
| >pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 | Back alignment and structure |
|
| >pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 | Back alignment and structure |
| >pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 | Back alignment and structure |
| >pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 | Back alignment and structure |
| >pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 | Back alignment and structure |
| >pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 | Back alignment and structure |
| >pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 | Back alignment and structure |
| >pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 | Back alignment and structure |
| >pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 | Back alignment and structure |
| >pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 | Back alignment and structure |
| >pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 | Back alignment and structure |
| >pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 | Back alignment and structure |
| >pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 | Back alignment and structure |
| >pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 | Back alignment and structure |
| >pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 | Back alignment and structure |
| >pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 | Back alignment and structure |
| >pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 | Back alignment and structure |
| >pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 | Back alignment and structure |
| >pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 | Back alignment and structure |
| >pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 | Back alignment and structure |
| >pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 | Back alignment and structure |
| >pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 | Back alignment and structure |
| >pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 | Back alignment and structure |
| >pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 | Back alignment and structure |
| >pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 | Back alignment and structure |
| >pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 | Back alignment and structure |
| >pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
Score = 674 bits (1741), Expect = 0.0
Identities = 177/403 (43%), Positives = 252/403 (62%), Gaps = 9/403 (2%)
Query: 390 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 449
V MA + ++++NGVA +H+EI+ E ++Y LWPEKF NKTNGVTPRRW+R NP
Sbjct: 393 VHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPG 452
Query: 450 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 509
LS +LT G++DWVT+ +L +LR +AD++ + + RA K NK +I E+ G +
Sbjct: 453 LSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512
Query: 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 569
P+++FD+Q+KR+HEYKRQLMN L ++ Y ++KE + R IFG KA Y
Sbjct: 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE----DGLTDIPARTVIFGAKAAPGY 568
Query: 570 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 629
V+AK I+K I + VN+DPE+ LLKV+FV +YNVS AE ++PAS++S+ ISTAG EA
Sbjct: 569 VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEA 628
Query: 630 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVP 688
SGTSNMKF MNG + +GT+DGANVEI VGEEN ++FGAR E+ LR+ + +
Sbjct: 629 SGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYET 688
Query: 689 DARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 745
+ + +G N + +L SL G +D + V DF Y E ++++
Sbjct: 689 VPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMA 748
Query: 746 EAYC-DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 787
Y D W RM+ +N S +FSSDRTI++YA +IW + P
Sbjct: 749 ADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPT 791
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 100.0 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 100.0 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 100.0 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.4 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 97.83 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 97.74 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 97.58 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 97.06 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 97.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 96.93 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 96.77 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 96.73 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 96.54 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 96.45 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 96.32 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 96.31 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 96.29 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 95.16 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 95.01 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 94.47 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 93.46 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 88.63 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 81.76 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 81.41 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 80.58 |
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 790 | ||||
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 1e-151 | |
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 3e-86 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 1e-148 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 6e-97 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-143 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-81 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 461 bits (1187), Expect = e-151
Identities = 181/433 (41%), Positives = 268/433 (61%), Gaps = 16/433 (3%)
Query: 363 EELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEF 422
+ + DV + + + + + MA+LC+ GSHAVNGVA IHSEI+ +F +F
Sbjct: 401 NRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDF 460
Query: 423 YKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDL 482
Y+L P KFQNKTNG+TPRRW+ CNP L+ I+ +G E+++++ +L +L + D+E
Sbjct: 461 YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAF 519
Query: 483 QSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 542
K+ NK+K ++++ + ++P+++FD+QVKRIHEYKRQL+N L ++ Y ++
Sbjct: 520 IRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI 579
Query: 543 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVP 602
K+ VPR + GGKA Y AK I+K IT +G VNHDP +GD L+VIF+
Sbjct: 580 KKEPNK----FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635
Query: 603 DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 662
+Y VS+AE +IPA++LS+ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E GEE
Sbjct: 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEE 695
Query: 663 NFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLE 717
NFF+FG R ++ L + ++ + ++ + + SG F D +++ L
Sbjct: 696 NFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLM 755
Query: 718 GNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 777
+ D F V D+ Y++CQE+V Y + + WTRM I N A S KFSSDRTI +Y
Sbjct: 756 HH------DRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQY 809
Query: 778 ARDIWNIIPVELP 790
AR+IW + P
Sbjct: 810 AREIWGVEPSRQR 822
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 100.0 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 100.0 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.96 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 96.89 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.58 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.36 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 94.57 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|