Citrus Sinensis ID: 003876

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHccHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHcccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHccccEEccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHccEEEEEEEccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEccccccccHHHHcccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccEEEEEEEEcccccccccccccccEEEEEEccccEEEEEEEEEcccccEEEcccccEEEccEEEEEEEcccccEEEEEEc
cccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHcccccccHcccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccccccccccccccccHHHHHHHHHHHHHcccccccHHHHccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEcccEEcHHHHHHHccHHHHHHHHHccccEEEHEHHccccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccHHHHHHHHHHHHHHcEEEEEcccccccccccccEEEEEccccccccHccccccccccccccHHHHHHHHHcccEEcccccccccccHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccEEcHHHcccccccEEEEEcccccHHHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccEEEEccccEEEccccccEEEEEEEEEEEcccccccccHccccccccccccccccccccHHcccccccccEEEEEEEEEEcccccccEEEEEEEEcccccccccHHHHcccEEEEEccccEEEEEEEEccHHHHEEEcccccEEEccccEEEEEccccccEEEEEc
msrpfmsiQLRERILFRVLQLIVVVNVIAfsnskpvlnkpdfpckpphfdsypfcntslsISTRAKSLISLLTLQEKIQQLSDnasaiprlgipayewwseslhgiasngpgvnfngtvssvtSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGqagltfwapninifrdprwgrgqetpgedpmVVSAYAVEFVKSfqgenwksddggigfgFREKRVLkgfgeesdrgdELMLSACCKHLIAYDLekwgnfsrysfnamiteqdtedtfqppfrscieqgkascimcsynqvngvpaclrgDLFQKArnewgfkgyitsdcDAVATIFEYQNytkthedsaagvlkadkgkvqeKDIDRALLNLFSVQLRlglfngdprkgkygklgpddvctsEHKKLALDAARQGIVLLkndkkflplnknavSSLAIIGPlvnnisqmgggytgipcspkslLRGLEAyvskthyasgchdvpcnsdagFHEAVRIAKKADFVIVVAGldltqetedrdrvslllpgqqmsLVTSVARTSKRPVILVltgggpldvsfaeadsqISSILWIGYPGEAGAKALAEIIfgdfnpggrlpmtwypesftkvpmndmnmradssrqypgrsyrfytgtqvygfghglsyTNYSYkflsapselTISASlkagsdknilqqtgsrldyvhidevtsctslrFHVQISvtnagdvdgsHVVMLFArvpkvsqgtpekqligfdrvhtvakgskeisfgvdpceqlsiankhgrrilplgnHVLMVGELRhsltiety
msrpfmsiQLRERILFRVLQLIVVVNVIAfsnskpvlnKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSfqgenwksddggigFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKthedsaagvlkadKGKVQEKDIDRALLNLFSVQLRlglfngdprkgkygkLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLdltqetedrdrvslllpgqqmslvtsvartskrPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPkvsqgtpekqligfDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGnhvlmvgelrhsltiety
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
******SIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRG******DPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPL*************ILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKV****************GRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLK****KNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSL*****
*************ILFRVLQLIVVVNVIAFSNSKPVLN*******PPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTI**S*KAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSL*IETY
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
******SIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGEN***************************GDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISA*L*************SRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query790 2.2.26 [Sep-21-2011]
Q9LXA8792 Probable beta-D-xylosidas yes no 0.975 0.973 0.642 0.0
Q9SGZ5767 Probable beta-D-xylosidas no no 0.906 0.933 0.493 0.0
A5JTQ3774 Beta-xylosidase/alpha-L-a N/A no 0.9 0.918 0.461 0.0
Q9LJN4781 Probable beta-D-xylosidas no no 0.929 0.939 0.450 0.0
A5JTQ2774 Beta-xylosidase/alpha-L-a N/A no 0.9 0.918 0.472 0.0
Q9FLG1784 Beta-D-xylosidase 4 OS=Ar no no 0.926 0.933 0.460 0.0
Q9LXD6773 Beta-D-xylosidase 3 OS=Ar no no 0.937 0.958 0.457 0.0
Q94KD8768 Probable beta-D-xylosidas no no 0.931 0.958 0.439 0.0
Q9FGY1774 Beta-D-xylosidase 1 OS=Ar no no 0.925 0.944 0.445 0.0
A1DJS5771 Probable exo-1,4-beta-xyl N/A no 0.843 0.863 0.374 1e-122
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function desciption
 Score = 1059 bits (2739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/803 (64%), Positives = 614/803 (76%), Gaps = 32/803 (3%)

Query: 6   MSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRA 65
           M++QL       ++ L+   + IA    K + + P FPCKPPHF SYPFCN SLSI  RA
Sbjct: 1   MNLQLT------LISLLFFTSAIA-ETFKNLDSHPQFPCKPPHFSSYPFCNVSLSIKQRA 53

Query: 66  KSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSF 125
            SL+SLL L EKI QLS+ A+++PRLGIP YEWWSESLHG+A NGPGV+FNG++S+ TSF
Sbjct: 54  ISLVSLLMLPEKIGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSF 113

Query: 126 PQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPG 185
           PQV+VSAASFNR+LW  IGSAVAVE RAMYN GQAGLTFWAPNIN+FRDPRWGRGQETPG
Sbjct: 114 PQVIVSAASFNRTLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPG 173

Query: 186 EDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKH 245
           EDP VVS Y VEFV+ FQ E  K       F             + D   +LMLSACCKH
Sbjct: 174 EDPKVVSEYGVEFVRGFQ-EKKKRKVLKRRFSDDVDDDRH----DDDADGKLMLSACCKH 228

Query: 246 LIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACL 305
             AYDLEKWGNF+RY FNA++TEQD EDT+QPPF +CI  GKASC+MCSYN VNGVPAC 
Sbjct: 229 FTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASCLMCSYNAVNGVPACA 288

Query: 306 RGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA------------ 353
           +GDL QKAR EWGF+GYITSDCDAVATIF YQ YTK+ E++ A  +KA            
Sbjct: 289 QGDLLQKARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINCGTYMLR 348

Query: 354 ------DKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLAL 407
                 ++GKV E+ +DRALLNLF+VQLRLGLF+GDPR+G+YGKLG +D+C+S+H+KLAL
Sbjct: 349 HTQSAIEQGKVSEELVDRALLNLFAVQLRLGLFDGDPRRGQYGKLGSNDICSSDHRKLAL 408

Query: 408 DAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEA 467
           +A RQGIVLLKND K LPLNKN VSSLAI+GP+ NNIS MGG YTG PC  K+L   L  
Sbjct: 409 EATRQGIVLLKNDHKLLPLNKNHVSSLAIVGPMANNISNMGGTYTGKPCQRKTLFTELLE 468

Query: 468 YVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQ 527
           YV KT YASGC DV C+SD GF EAV IAK ADFVIVVAGLDL+QETED+DRVSL LPG+
Sbjct: 469 YVKKTSYASGCSDVSCDSDTGFGEAVAIAKGADFVIVVAGLDLSQETEDKDRVSLSLPGK 528

Query: 528 QMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFG 587
           Q  LV+ VA  SK+PVILVLTGGGP+DV+FA+ D +I SI+WIGYPGE G +ALAEIIFG
Sbjct: 529 QKDLVSHVAAVSKKPVILVLTGGGPVDVTFAKNDPRIGSIIWIGYPGETGGQALAEIIFG 588

Query: 588 DFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNY 647
           DFNPGGRLP TWYPESFT V M+DM+MRA+SSR YPGR+YRFYTG QVY FG GLSYT +
Sbjct: 589 DFNPGGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKF 648

Query: 648 SYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDE--VTSCTSLRFHVQISVTNA 705
            YK LSAP  L++S  L   S      Q G  L Y+ +D+  V SC SLRF+V++ V+N 
Sbjct: 649 EYKILSAPIRLSLSELLPQQSSHKKQLQHGEELRYLQLDDVIVNSCESLRFNVRVHVSNT 708

Query: 706 GDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHG 765
           G++DGSHVVMLF+++P V  G PEKQLIG+DRVH  +    E  F +DPC+QLS+AN  G
Sbjct: 709 GEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVG 768

Query: 766 RRILPLGNHVLMVGELRHSLTIE 788
           +R++PLG+HVL +G+L+HSL++E
Sbjct: 769 KRVIPLGSHVLFLGDLQHSLSVE 791

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|A1DJS5|XYND_NEOFI Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query790
TAIR|locus:2142434792 AT5G10560 [Arabidopsis thalian 0.956 0.954 0.647 6.7e-278
TAIR|locus:2029391767 AT1G78060 [Arabidopsis thalian 0.562 0.578 0.475 8.1e-200
TAIR|locus:2091236781 AT3G19620 [Arabidopsis thalian 0.521 0.527 0.460 3.3e-188
TAIR|locus:2196060768 BXL2 "beta-xylosidase 2" [Arab 0.534 0.549 0.429 2.3e-185
TAIR|locus:2174809784 XYL4 "beta-D-xylosidase 4" [Ar 0.929 0.936 0.466 4.8e-181
TAIR|locus:2144756773 BXL3 "AT5G09730" [Arabidopsis 0.940 0.961 0.460 2.7e-180
TAIR|locus:2157994774 BXL1 "beta-xylosidase 1" [Arab 0.925 0.944 0.447 2.7e-178
ASPGD|ASPL0000029139763 bxlB [Emericella nidulans (tax 0.412 0.427 0.354 6.1e-118
UNIPROTKB|Q5ATH9763 bxlB "Exo-1,4-beta-xylosidase 0.412 0.427 0.354 6.1e-118
ASPGD|ASPL0000048081803 xlnD [Emericella nidulans (tax 0.872 0.858 0.331 5.6e-100
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2671 (945.3 bits), Expect = 6.7e-278, P = 6.7e-278
 Identities = 518/800 (64%), Positives = 621/800 (77%)

Query:    18 VLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEK 77
             ++ L+   + IA    K + + P FPCKPPHF SYPFCN SLSI  RA SL+SLL L EK
Sbjct:     7 LISLLFFTSAIA-ETFKNLDSHPQFPCKPPHFSSYPFCNVSLSIKQRAISLVSLLMLPEK 65

Query:    78 IQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNR 137
             I QLS+ A+++PRLGIP YEWWSESLHG+A NGPGV+FNG++S+ TSFPQV+VSAASFNR
Sbjct:    66 IGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIVSAASFNR 125

Query:   138 SLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVE 197
             +LW  IGSAVAVE RAMYN GQAGLTFWAPNIN+FRDPRWGRGQETPGEDP VVS Y VE
Sbjct:   126 TLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPGEDPKVVSEYGVE 185

Query:   198 FVKSFQGENWKSDDGGIGFGFREKRVLKG-FGEE--SDRGDE-----LMLSACCKHLIAY 249
             FV+ FQ +             ++++VLK  F ++   DR D+     LMLSACCKH  AY
Sbjct:   186 FVRGFQEK-------------KKRKVLKRRFSDDVDDDRHDDDADGKLMLSACCKHFTAY 232

Query:   250 DLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDL 309
             DLEKWGNF+RY FNA++TEQD EDT+QPPF +CI  GKASC+MCSYN VNGVPAC +GDL
Sbjct:   233 DLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASCLMCSYNAVNGVPACAQGDL 292

Query:   310 FQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA---------------- 353
              QKAR EWGF+GYITSDCDAVATIF YQ YTK+ E++ A  +KA                
Sbjct:   293 LQKARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINCGTYMLRHTQS 352

Query:   354 --DKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAAR 411
               ++GKV E+ +DRALLNLF+VQLRLGLF+GDPR+G+YGKLG +D+C+S+H+KLAL+A R
Sbjct:   353 AIEQGKVSEELVDRALLNLFAVQLRLGLFDGDPRRGQYGKLGSNDICSSDHRKLALEATR 412

Query:   412 QGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSK 471
             QGIVLLKND K LPLNKN VSSLAI+GP+ NNIS MGG YTG PC  K+L   L  YV K
Sbjct:   413 QGIVLLKNDHKLLPLNKNHVSSLAIVGPMANNISNMGGTYTGKPCQRKTLFTELLEYVKK 472

Query:   472 THYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSL 531
             T YASGC DV C+SD GF EAV IAK ADFVIVVAGLDL+QETED+DRVSL LPG+Q  L
Sbjct:   473 TSYASGCSDVSCDSDTGFGEAVAIAKGADFVIVVAGLDLSQETEDKDRVSLSLPGKQKDL 532

Query:   532 VTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNP 591
             V+ VA  SK+PVILVLTGGGP+DV+FA+ D +I SI+WIGYPGE G +ALAEIIFGDFNP
Sbjct:   533 VSHVAAVSKKPVILVLTGGGPVDVTFAKNDPRIGSIIWIGYPGETGGQALAEIIFGDFNP 592

Query:   592 GGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKF 651
             GGRLP TWYPESFT V M+DM+MRA+SSR YPGR+YRFYTG QVY FG GLSYT + YK 
Sbjct:   593 GGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKI 652

Query:   652 LSAPSELTISASL-KAGSDKNILQQTGSRLDYVHIDEV--TSCTSLRFHVQISVTNAGDV 708
             LSAP  L++S  L +  S K  LQ  G  L Y+ +D+V   SC SLRF+V++ V+N G++
Sbjct:   653 LSAPIRLSLSELLPQQSSHKKQLQH-GEELRYLQLDDVIVNSCESLRFNVRVHVSNTGEI 711

Query:   709 DGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRI 768
             DGSHVVMLF+++P V  G PEKQLIG+DRVH  +    E  F +DPC+QLS+AN  G+R+
Sbjct:   712 DGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVGKRV 771

Query:   769 LPLGNHVLMVGELRHSLTIE 788
             +PLG+HVL +G+L+HSL++E
Sbjct:   772 IPLGSHVLFLGDLQHSLSVE 791
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=TAS
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms
ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4WFI6BXLB_ASPFU3, ., 2, ., 1, ., 3, 70.37400.85940.8806yesno
A2QA27XYND_ASPNC3, ., 2, ., 1, ., 3, 70.33880.86830.8532yesno
Q5ATH9BXLB_EMENI3, ., 2, ., 1, ., 3, 70.35610.86580.8964yesno
O00089XYND_ASPNG3, ., 2, ., 1, ., 3, 70.33880.86830.8532yesno
Q9LXA8BXL6_ARATH3, ., 2, ., 1, ., -0.64250.97590.9734yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.370.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query790
PLN03080779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
PRK15098765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 8e-76
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 1e-58
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 7e-48
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-42
pfam1431071 pfam14310, Fn3-like, Fibronectin type III-like dom 5e-12
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score = 1336 bits (3458), Expect = 0.0
 Identities = 537/793 (67%), Positives = 630/793 (79%), Gaps = 41/793 (5%)

Query: 17  RVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQE 76
           R L L++ +  +  +      + P FPCKPP F +YPFCN SL I  RA+SL+SLLTL E
Sbjct: 6   RPLFLLLFLLALGATFKAADAH-PQFPCKPPTFSAYPFCNASLPIPARARSLVSLLTLDE 64

Query: 77  KIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFN-GTVSSVTSFPQVLVSAASF 135
           KI QLS+ A+ +PRLGIP YEWWSESLHG+A NGPGV+FN G VS+ TSFPQV++SAASF
Sbjct: 65  KIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILSAASF 124

Query: 136 NRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYA 195
           NRSLW  IGSA+AVEARAMYN GQAGLTFWAPNINIFRDPRWGRGQETPGEDP V SAY+
Sbjct: 125 NRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYS 184

Query: 196 VEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWG 255
           VEFVK FQG  WK                           +LMLSACCKH  AYDLEKWG
Sbjct: 185 VEFVKGFQGGKWKKVRD------------------DGEDGKLMLSACCKHYTAYDLEKWG 226

Query: 256 NFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARN 315
           NFSRY+FNA++TEQD EDT+QPPF+SCI++GKASC+MCSYNQVNGVPAC R DL QKAR+
Sbjct: 227 NFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARD 286

Query: 316 EWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA------------------DKGK 357
           EWGF+GYITSDCDAVATIFEYQ YTK+ ED+ A VLKA                  +KGK
Sbjct: 287 EWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGK 346

Query: 358 VQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLL 417
           VQE+DIDRAL NLFSVQLRLGLF+GDPR G YGKLGP++VCT EH++LAL+AARQGIVLL
Sbjct: 347 VQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLL 406

Query: 418 KNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASG 477
           KNDKKFLPLNK+ VSSLAIIGP+ N+   +GG YTG+PC P +L +GL+AYV KT +A+G
Sbjct: 407 KNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAG 466

Query: 478 CHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVAR 537
           C DV CNSD GF EA+ IAK+ADFV+VVAGLDL+QETED DRVSLLLPG+QM L++SVA 
Sbjct: 467 CKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVAS 526

Query: 538 TSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPM 597
            SK+PV+LVLTGGGP+DVSFA+ D +I+SILWIGYPGE G +ALAEIIFGD+NPGGRLPM
Sbjct: 527 VSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPM 586

Query: 598 TWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSE 657
           TWYPESFT VPM DMNMRAD SR YPGR+YRFYTG  VYGFG+GLSYT +SYK LSAP +
Sbjct: 587 TWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKK 646

Query: 658 LTISASL--KAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVM 715
           L++S S    + S K +LQ+    LDYV I+++ SC SLRF+V ISV+N G++DGSHVVM
Sbjct: 647 LSLSRSSVQDSISRKPLLQR-RDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVM 705

Query: 716 LFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHV 775
           LF+R P V  G PEKQL+GFDRVHT +  S E    VDPC+ LS+AN+ G+R+LPLG+HV
Sbjct: 706 LFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHV 765

Query: 776 LMVGELRHSLTIE 788
           LM+G+L HSL+IE
Sbjct: 766 LMLGDLEHSLSIE 778

Length = 779
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 790
PLN03080779 Probable beta-xylosidase; Provisional 100.0
PRK15098765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 100.0
PF1431071 Fn3-like: Fibronectin type III-like domain; PDB: 3 99.8
PF07705101 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic 95.79
PF1063378 NPCBM_assoc: NPCBM-associated, NEW3 domain of alph 95.0
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 91.03
PF14874102 PapD-like: Flagellar-associated PapD-like 87.98
COG0486454 ThdF Predicted GTPase [General function prediction 86.16
PRK13202104 ureB urease subunit beta; Reviewed 85.23
PRK13203102 ureB urease subunit beta; Reviewed 84.83
cd00407101 Urease_beta Urease beta-subunit; Urease is a nicke 82.92
TIGR00192101 urease_beta urease, beta subunit. In a number of s 82.5
PF00699100 Urease_beta: Urease beta subunit CAUTION: The Pros 80.97
PRK13201136 ureB urease subunit beta; Reviewed 80.85
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-163  Score=1452.41  Aligned_cols=734  Identities=72%  Similarity=1.250  Sum_probs=634.8

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCHHHHHHHHHhcCCHHHHHHhhcCCCCCcccCCCCchhhhhccccceecCCCCcccc-
Q 003876           38 NKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFN-  116 (790)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~~~~i~rlgip~~~~~~d~~~G~~~~~~g~~~~-  116 (790)
                      ..++++|.+.+...+||||++++.++|+++||++||||||++||.+.+++++|||||.+.||+|++||++..++|+++. 
T Consensus        26 ~~~~~~c~~~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~~g~~~~~  105 (779)
T PLN03080         26 AHPQFPCKPPTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNS  105 (779)
T ss_pred             CCCCcCCCCccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCCCcccccc
Confidence            3578999987778899999999999999999999999999999999999999999999999999999998888887775 


Q ss_pred             CCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCceecccCCCCCCCCCCCCCCCHHHHHHHHH
Q 003876          117 GTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAV  196 (790)
Q Consensus       117 ~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~di~r~p~~gr~~esfgeDp~l~~~~~~  196 (790)
                      +....+|.||+++++|||||++|++++|+++|+|+|+++|.|..|+++|+|++||.|||+|||++|||||||+|+++|+.
T Consensus       106 g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGEDP~lv~~~a~  185 (779)
T PLN03080        106 GPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYSV  185 (779)
T ss_pred             CCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccCcCCCHHHHHHHHH
Confidence            33457899999999999999999999999999999999665544667789999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeecccccCCccccCCCccceeccccChhhhhhccC
Q 003876          197 EFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQ  276 (790)
Q Consensus       197 a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l  276 (790)
                      |+|+|||+.+....                 .++. ..++.+|+||+||||||+++++.++.|..+++.+++++|+|+||
T Consensus       186 a~V~GlQ~~~~~~~-----------------~~~~-~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl  247 (779)
T PLN03080        186 EFVKGFQGGKWKKV-----------------RDDG-EDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQ  247 (779)
T ss_pred             HHHHHhcCCCcccc-----------------cccc-cCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhh
Confidence            99999998521000                 0000 01233599999999999998777778888899999999999999


Q ss_pred             hhHHHHHHhCCCceeeeeccccCCcccccCHHHHHHHHHHhCCCcEEEccchHHHHhhhccccCCCHHHHHHHHHHH---
Q 003876          277 PPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA---  353 (790)
Q Consensus       277 ~PF~~~i~~g~~~~vM~sy~~vng~pa~~s~~ll~~LR~e~gF~G~VvSD~~~~~~~~~~~~~~~~~~~a~~~al~A---  353 (790)
                      +||++||++|.+++||||||++||+|+|+|++||++||+||||+|+|||||++|..+...|++..+.++++++||+|   
T Consensus       248 ~PF~~ai~~g~~~~VM~sYn~vnG~Pa~~s~~lL~~LR~ewGF~G~VvSD~~a~~~~~~~~~~~~~~~ea~~~Al~AG~D  327 (779)
T PLN03080        248 PPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMD  327 (779)
T ss_pred             HHHHHHHHhcCCeEEEeCCcCcCCccccCCHHHHHHHHHHhCcCCeEecchHHHHHhhhcccccCCHHHHHHHHHHcCCC
Confidence            99999999998879999999999999999999997799999999999999999999988888877889999999988   


Q ss_pred             ---------------hcCCCcHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhc
Q 003876          354 ---------------DKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLK  418 (790)
Q Consensus       354 ---------------~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLK  418 (790)
                                     ++|+|+|++||+||+|||++|+++|+|+..|...+|.+.....+++++|+++|+|+|++||||||
T Consensus       328 l~~~~~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLK  407 (779)
T PLN03080        328 INCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLK  407 (779)
T ss_pred             cccCchhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEe
Confidence                           89999999999999999999999999994443334554556678899999999999999999999


Q ss_pred             cCCCcccCCCCCCCeEEEEccCcccccccCCCccCCCCCcCcHHHHHHhhhcceeEeccCCCCCCCCchhHHHHHHHhhc
Q 003876          419 NDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKK  498 (790)
Q Consensus       419 N~~~~LPL~~~~~~kIaViGp~a~~~~~~~G~~~g~~~~~~t~~egL~~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~  498 (790)
                      |++++|||++.+.+||+||||+|+....++|+|++.+++.+|++++|+++..++.|..||....+.+...+++|+++|++
T Consensus       408 N~~~~LPL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~  487 (779)
T PLN03080        408 NDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKR  487 (779)
T ss_pred             cCCCCCCCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhcc
Confidence            99999999976567999999999998888889999889999999999998877889999876555555678999999999


Q ss_pred             CCEEEEEEecCCCCccccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChhHH
Q 003876          499 ADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGA  578 (790)
Q Consensus       499 aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe~g  578 (790)
                      ||+|||++|.+...++|+.||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+.+.++++|||++|||||++|
T Consensus       488 aD~vIv~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG  567 (779)
T PLN03080        488 ADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGG  567 (779)
T ss_pred             CCEEEEEeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccch
Confidence            99999999999889999999999999999999999999875678999999999999999876678999999999999999


Q ss_pred             HHHHHHHhCCCCCCccCCceeCCCCCCCCCCCCCCcccCCCCCCCCCcccccCCCcccccCCccCCCCceeccCCCcccc
Q 003876          579 KALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSEL  658 (790)
Q Consensus       579 ~AiAdVL~G~~nPSGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTtF~ys~l~~~~~~  658 (790)
                      +||||||||++|||||||+||||+++.++|+++++++++...+|+|++||||+.+|+||||||||||||+||++++++..
T Consensus       568 ~AiAdvLfG~vnPsGkLPvT~~p~~~~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~  647 (779)
T PLN03080        568 QALAEIIFGDYNPGGRLPMTWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKL  647 (779)
T ss_pred             hhhHHHHcCCCCCCCcCeeeecccccccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEeccccccccc
Confidence            99999999999999999999999999999999888887666779999999999999999999999999999999754322


Q ss_pred             ccccccccCCCcccc-cccCCCCcccccccccccccceEEEEEEEEecCCCCCceEEEEEEecCCCCCCccccccccccc
Q 003876          659 TISASLKAGSDKNIL-QQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDR  737 (790)
Q Consensus       659 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~k  737 (790)
                      ++............. ..........+......|.+..++|+|+|||||+++|+||||||+++|.++..+|.|||+||+|
T Consensus       648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF~k  727 (779)
T PLN03080        648 SLSRSSVQDSISRKPLLQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDR  727 (779)
T ss_pred             cccccccccccccccccccccccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCcEe
Confidence            221000000000000 0000000000000001232236999999999999999999999999998877899999999999


Q ss_pred             cccCCCCEEEEEEEecCCCCceEEeCCCcEEecCceEEEEEecCCceEEEEe
Q 003876          738 VHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIET  789 (790)
Q Consensus       738 v~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~~s~~~~~~~  789 (790)
                      |+|+|||+++|+|+|+++++|++||++++|++|+|+|+|+||+++|+++|++
T Consensus       728 v~L~~Ges~~V~~~l~~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~~  779 (779)
T PLN03080        728 VHTASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIEI  779 (779)
T ss_pred             EeeCCCCEEEEEEEeCchHHceEEcCCCcEEEeCccEEEEEeCCccceEEeC
Confidence            9999999999999999756899999999999999999999999999999975

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information
>PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A Back     alignment and domain information
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins Back     alignment and domain information
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>PF14874 PapD-like: Flagellar-associated PapD-like Back     alignment and domain information
>COG0486 ThdF Predicted GTPase [General function prediction only] Back     alignment and domain information
>PRK13202 ureB urease subunit beta; Reviewed Back     alignment and domain information
>PRK13203 ureB urease subunit beta; Reviewed Back     alignment and domain information
>cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide Back     alignment and domain information
>TIGR00192 urease_beta urease, beta subunit Back     alignment and domain information
>PF00699 Urease_beta: Urease beta subunit CAUTION: The Prosite patterns do not match this subunit of the enzyme; InterPro: IPR002019 Urease 3 Back     alignment and domain information
>PRK13201 ureB urease subunit beta; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query790
2x40_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 4e-37
2x42_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 4e-36
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 6e-29
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 7e-29
3zyz_A713 Crystal Structure Of A Glycoside Hydrolase Family 3 2e-27
4i8d_A714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 2e-27
3rrx_A822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 5e-24
3usz_A822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 6e-24
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 7e-24
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-15
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 3e-20
3ac0_A845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-15
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 2e-17
3abz_A845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 2e-15
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure 
Iteration: 1

 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 183/773 (23%), Positives = 306/773 (39%), Gaps = 196/773 (25%)
Query: 64  RAKSLISLLTLQEKIQQL-------------------SDNASAIPRLGIPAYEWWSESLH 104
           +   ++S LTL+EK++ +                   +     +PR+G+PA+        
Sbjct: 3   KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-------- 54
Query: 105 GIASNGP-GVNFNGTVSS------VTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNL 157
            + ++GP G+  N T  +       T+FP  ++ A+++NR L   +G A+  E R  Y +
Sbjct: 55  -VLADGPAGLRINPTRENDENTYYTTAFPVEIMLASTWNRELLEEVGKAMGEEVRE-YGV 112
Query: 158 GQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFG 217
                   AP +NI R+P  GR  E   EDP++    A  FVK  Q +       G+G  
Sbjct: 113 D----VLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-------GVG-- 159
Query: 218 FREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQP 277
                                  AC KH +A + E     +R   + +++E+   + +  
Sbjct: 160 -----------------------ACIKHFVANNQET----NRMVVDTIVSERALREIYLR 192
Query: 278 PFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKA-RNEWGFKGYITSDC--------- 327
            F   +++ K   +M +YN++NG        L +K  R EWGF+G++ SD          
Sbjct: 193 GFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDNPVEQ 252
Query: 328 -----DAVATIFEYQNYTKTHEDSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNG 382
                D +     YQ  T+  ++    +    +GK+ E+ +D  + N+  V     L N 
Sbjct: 253 LKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKV-----LVNA 307
Query: 383 DPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVN 442
              K       PD     +H K+A +A  +G+VLL+N++  LPL++N  S +A+ G    
Sbjct: 308 PSFKNYRYSNKPD---LEKHAKVAYEAGAEGVVLLRNEEA-LPLSEN--SKIALFG--TG 359
Query: 443 NISQMGGGYTGIPCSPK---SLLRGL---------------EAYVSKTHYASGCH----- 479
            I  + GG       P+   S+L G+               E Y+ K             
Sbjct: 360 QIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDS 419
Query: 480 -------DVPCN--SDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVS--LLLPGQQ 528
                   +P N  S+   H   ++AKK D  ++V    ++ E  DR  V     L   +
Sbjct: 420 WGTIIKPKLPENFLSEKEIH---KLAKKNDVAVIVIS-RISGEGYDRKPVKGDFYLSDDE 475
Query: 529 MSLVTSVAR---TSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEII 585
             L+ +V+R      + VI++L  G P++V        +  IL +   G+   + +A+++
Sbjct: 476 TDLIKTVSREFHEQGKKVIVLLNIGSPVEV--VSWRDLVDGILLVWQAGQETGRIVADVL 533
Query: 586 FGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQ--------YPGRSYRFYTGTQV-- 635
            G  NP G+LP T +P  ++ VP          + Q        Y G  YR+Y    V  
Sbjct: 534 TGRINPSGKLPTT-FPRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVG--YRYYDTFGVEP 590
Query: 636 -YGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSL 694
            Y FG+GLSYT + Y                  SD N+                 S    
Sbjct: 591 AYEFGYGLSYTTFEY------------------SDLNV-----------------SFDGE 615
Query: 695 RFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKE 747
              VQ  + N G   G  V  ++ + PK     P ++L  F +   +  G  E
Sbjct: 616 TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESE 668
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query790
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-149
3rrx_A822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 1e-124
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-117
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 5e-84
3abz_A845 Beta-glucosidase I; glycoside hydrolase family3 be 6e-50
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 4e-32
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 3e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 5e-04
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  452 bits (1166), Expect = e-149
 Identities = 176/812 (21%), Positives = 302/812 (37%), Gaps = 189/812 (23%)

Query: 64  RAKSLISLLTLQEKIQQLS-------------------DNASAIPRLGIPAYEWWSESLH 104
           +   ++S LTL+EK++ +                         +PR+G+PA+   ++   
Sbjct: 3   KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPA 61

Query: 105 GIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLT- 163
           G+  N    N   T    T+FP  ++ A+++NR L   +G A+  E R        G+  
Sbjct: 62  GLRINPTRENDENTYY-TTAFPVEIMLASTWNRELLEEVGKAMGEEVREY------GVDV 114

Query: 164 FWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRV 223
             AP +NI R+P  GR  E   EDP++    A  FVK  Q +       G+G        
Sbjct: 115 LLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-------GVG-------- 159

Query: 224 LKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCI 283
                            AC KH +A + E      R   + +++E+   + +   F   +
Sbjct: 160 -----------------ACIKHFVANNQETN----RMVVDTIVSERALREIYLRGFEIAV 198

Query: 284 EQGKASCIMCSYNQVNGVPAC-----LRGDLFQKARNEWGFKGYITSDCDAVATIFE--- 335
           ++ K   +M +YN++NG         L+  L    R EWGF+G++ SD  A     E   
Sbjct: 199 KKSKPWSVMSAYNKLNGKYCSQNEWLLKKVL----REEWGFEGFVMSDWYAGDNPVEQLK 254

Query: 336 ----------YQNYTKTHEDSAAGVLKA-DKGKVQEKDIDRALLNLFSVQLRLGLFNGDP 384
                              D    +++A  +GK+ E+ +D  + N+  V +    F    
Sbjct: 255 AGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYR 314

Query: 385 RKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNI 444
              K            +H K+A +A  +G+VLL+N++  LPL++N+   +A+ G      
Sbjct: 315 YSNKPD--------LEKHAKVAYEAGAEGVVLLRNEE-ALPLSENS--KIALFGTGQIET 363

Query: 445 SQMGGGY-TGIPCSPKSLLRGLEAYVSKTH--YASGCHD--------------------- 480
            + G G     P    S+L G++          A    D                     
Sbjct: 364 IKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTI 423

Query: 481 ---VPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVS----LLLPGQQMSLVT 533
                  +     E  ++AKK D  ++V         E  DR        L   +  L+ 
Sbjct: 424 IKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIK 480

Query: 534 SVARTSKR---PVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFN 590
           +V+R        VI++L  G P++V        +  IL +   G+   + +A+++ G  N
Sbjct: 481 TVSREFHEQGKKVIVLLNIGSPVEV--VSWRDLVDGILLVWQAGQETGRIVADVLTGRIN 538

Query: 591 PGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRS------YRFYTGTQV---YGFGHG 641
           P G+LP T+ P  ++ VP          + Q           YR+Y    V   Y FG+G
Sbjct: 539 PSGKLPTTF-PRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYG 597

Query: 642 LSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQIS 701
           LSYT + Y      S+L +S                        + +         VQ  
Sbjct: 598 LSYTTFEY------SDLNVSFD---------------------GETLR--------VQYR 622

Query: 702 VTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKG-SKEISFGVDPCEQLSI 760
           + N G   G  V  ++ + PK     P ++L  F +   +  G S+E+   +     L+ 
Sbjct: 623 IENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLAS 681

Query: 761 ANKHGRRILPLGNHVLMVG----ELRHSLTIE 788
            N     +   G + + VG     ++   T  
Sbjct: 682 FNGEEWVVEA-GEYEVRVGASSRNIKLKGTFS 712
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query790
3abz_A845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3zyz_A713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3rrx_A822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
3idu_A127 Uncharacterized protein; all beta-protein, structu 95.95
2l0d_A114 Cell surface protein; structural genomics, northea 94.5
2kut_A122 Uncharacterized protein; structural genomics, PSI- 94.13
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 91.07
4ep8_B101 Urease subunit beta; alpha-beta barrel, nickel met 89.68
4ubp_B126 Protein (urease (chain B)); bacillus pasteurii, ni 85.53
4ac7_B126 Urease subunit beta; hydrolase, bacillus pasteurii 85.53
1w8o_A 601 Bacterial sialidase; 3D-structure, glycosidase, hy 81.72
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-142  Score=1284.20  Aligned_cols=623  Identities=27%  Similarity=0.436  Sum_probs=535.4

Q ss_pred             HHHHHHHhcCCHHHHHHhhcC----CCCCcccCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHH
Q 003876           63 TRAKSLISLLTLQEKIQQLSD----NASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRS  138 (790)
Q Consensus        63 ~r~~~ll~~mtleEKv~ql~~----~~~~i~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~  138 (790)
                      .|+++||++||||||++||.+    ...+++|+|||.+ +++|++||+.    +.++.+ ...+|.||+++++|||||++
T Consensus         4 ~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~~   77 (845)
T 3abz_A            4 FDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDRD   77 (845)
T ss_dssp             CCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCHH
T ss_pred             HHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCHH
Confidence            579999999999999999986    4678999999999 6899999986    222221 12489999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCcceeeCceecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCccc
Q 003876          139 LWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGF  218 (790)
Q Consensus       139 l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~  218 (790)
                      |++++|+++|+|+|++   |+ +++ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++             
T Consensus        78 l~~~~g~~~g~E~ra~---Gi-~~~-laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-------------  139 (845)
T 3abz_A           78 LLETAGKLMAKESIAK---NA-AVI-LGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-------------  139 (845)
T ss_dssp             HHHHHHHHHHHHHHHT---TC-SEE-ECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-------------
T ss_pred             HHHHHHHHHHHHHHHc---CC-CEE-ecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-------------
Confidence            9999999999999999   66 444 69999999999999999999999999999999999999998             


Q ss_pred             ccceeeccCCCCCCCCCccceeeeecccccCCccccCCCccceeccccChhhhhhccChhHHHHHH-hCCCceeeeeccc
Q 003876          219 REKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIE-QGKASCIMCSYNQ  297 (790)
Q Consensus       219 ~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~-~g~~~~vM~sy~~  297 (790)
                                     |    |++|+|||||||++    ++|+..++.+++++|+|+||+||+++|+ +|+. +||||||+
T Consensus       140 ---------------g----V~a~~KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~-~VM~syn~  195 (845)
T 3abz_A          140 ---------------G----IAATVKHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPV-CIMTAYNK  195 (845)
T ss_dssp             ---------------T----CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCS-EEEECSSE
T ss_pred             ---------------C----eeEEeeccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCC-EEEecCCC
Confidence                           6    99999999999965    3566677889999999999999999997 6655 99999999


Q ss_pred             cCCcccccCHHHHHH-HHHHhCCCcEEEccchHHHHhhh-------ccccCC---CHHHHHHHHHHHhcCC-CcHHHHHH
Q 003876          298 VNGVPACLRGDLFQK-ARNEWGFKGYITSDCDAVATIFE-------YQNYTK---THEDSAAGVLKADKGK-VQEKDIDR  365 (790)
Q Consensus       298 vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~~~~~~~~~-------~~~~~~---~~~~a~~~al~A~~g~-i~~~~id~  365 (790)
                      +||+|||+|++||++ ||+||||+|+|||||++|.....       ......   ...+.+..|+  ++|+ |++++||+
T Consensus       196 ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~Al~AG~D~~m~~~~~~~~~~~l~~av--~~G~~i~~~~id~  273 (845)
T 3abz_A          196 VNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTYTTAAAIKNGLDIEFPGPTRWRTRALVSHSL--NSREQITTEDVDD  273 (845)
T ss_dssp             ETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCCCSHHHHHHTCCBBCSSSCSSCCHHHHHHHH--HTTCSCCHHHHHH
T ss_pred             cCCEeccCCHHHHHHHHhhccCCCeEEEcccccHHHHHHHHHcCCCcccCCchhhhHHHHHHHHH--HcCccchHHHHHH
Confidence            999999999999999 99999999999999997653221       100011   1123566666  8999 99999999


Q ss_pred             HHHHHHHHHHHhc----ccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCCCCCCCeEEEEccCc
Q 003876          366 ALLNLFSVQLRLG----LFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLV  441 (790)
Q Consensus       366 av~Ril~~k~~~G----lf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~~~~~~kIaViGp~a  441 (790)
                      ||+|||++|+++|    +|+ +|+..    .....+++++|+++|+++|++|||||||++++|||++  .+||+||||+|
T Consensus       274 av~RIL~~k~~~g~l~~~~~-~p~~~----~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A  346 (845)
T 3abz_A          274 RVRQVLKMIKFVVDNLEKTG-IVENG----PESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNA  346 (845)
T ss_dssp             HHHHHHHHHHHHHHTHHHHC-CCTTC----CCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCCcccccc-CCccC----ccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCc
Confidence            9999999999999    998 55321    1123478999999999999999999999999999986  36999999999


Q ss_pred             ccccccCCCccC-CCCCcCcHHHHHHhhhc-ceeEeccCCCC------------------------------------C-
Q 003876          442 NNISQMGGGYTG-IPCSPKSLLRGLEAYVS-KTHYASGCHDV------------------------------------P-  482 (790)
Q Consensus       442 ~~~~~~~G~~~g-~~~~~~t~~egL~~~~~-~~~y~~g~~~~------------------------------------~-  482 (790)
                      +....++|+|+. .+.+.+||++||++++. .+.|..||...                                    . 
T Consensus       347 ~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~  426 (845)
T 3abz_A          347 KAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERS  426 (845)
T ss_dssp             SCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSC
T ss_pred             chhhccCCCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCc
Confidence            988776666654 46778999999998764 36666665310                                    0 


Q ss_pred             -------------------------------C------------------------------------------------
Q 003876          483 -------------------------------C------------------------------------------------  483 (790)
Q Consensus       483 -------------------------------~------------------------------------------------  483 (790)
                                                     .                                                
T Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~  506 (845)
T 3abz_A          427 DDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSF  506 (845)
T ss_dssp             TTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCST
T ss_pred             ccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeecccccccccc
Confidence                                           0                                                


Q ss_pred             ---------------------------------------------------CC-chhHHHHHHHhhcCCEEEEEEecCCC
Q 003876          484 ---------------------------------------------------NS-DAGFHEAVRIAKKADFVIVVAGLDLT  511 (790)
Q Consensus       484 ---------------------------------------------------~~-~~~~~~a~~~a~~aDvvIv~vG~~~~  511 (790)
                                                                         .+ ...+++|+++|++||+||||+|.+..
T Consensus       507 ~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~  586 (845)
T 3abz_A          507 CFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGE  586 (845)
T ss_dssp             TTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTT
T ss_pred             ccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCc
Confidence                                                               00 13478899999999999999999999


Q ss_pred             CccccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChhHHHHHHHHHhCCCCC
Q 003876          512 QETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNP  591 (790)
Q Consensus       512 ~e~Eg~Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe~g~AiAdVL~G~~nP  591 (790)
                      .++||.||.+|.||+.|++||++|+++ ++|||||+++|+|++|+|++   +++|||++||||||+|+||||||||++||
T Consensus       587 ~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNP  662 (845)
T 3abz_A          587 WETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVP  662 (845)
T ss_dssp             TSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred             cccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence            999999999999999999999999999 89999999999999999884   79999999999999999999999999999


Q ss_pred             CccCCceeCCCCCCCCCCCCCCcccC-----CCCCCCCCcccccC---CCcccccCCccCCCCceec--cCCCccccccc
Q 003876          592 GGRLPMTWYPESFTKVPMNDMNMRAD-----SSRQYPGRSYRFYT---GTQVYGFGHGLSYTNYSYK--FLSAPSELTIS  661 (790)
Q Consensus       592 SGkLPvT~~p~~~~~~p~~~~~~~~~-----~~~~~~g~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~l~~~~~~~~~  661 (790)
                      |||||+|| |++++|+|.++......     .++.|  .+||||+   .+|+||||||||||||+||  +++      + 
T Consensus       663 SGkLP~T~-p~~~~d~P~~~~~~~~~g~~~y~eg~~--vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~------v-  732 (845)
T 3abz_A          663 NGKLSLSW-PFKLQDNPAFLNFKTEFGRVIYGEDIF--VGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFK------V-  732 (845)
T ss_dssp             CCCCSSCB-CSSGGGSTTTTSCSCBTTEEECTTTTC--CTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEE------E-
T ss_pred             CCCCceee-eCchhhCCccccCCCCCCceeccCCcc--CCCcchhcCCCceeecccCCCcceeEEEeccccc------c-
Confidence            99999997 88899999764321100     12233  3699997   5799999999999999999  887      1 


Q ss_pred             cccccCCCcccccccCCCCcccccccccccccceEEEEEEEEecC-CCCCceEEEEEEecCCCCCCcccccccccccccc
Q 003876          662 ASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAG-DVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHT  740 (790)
Q Consensus       662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vsv~VtNtG-~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L  740 (790)
                          +                          ++.++|+|+||||| +++|+||||||+++|.+++.+|.||||||+||+|
T Consensus       733 ----~--------------------------~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L  782 (845)
T 3abz_A          733 ----T--------------------------DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL  782 (845)
T ss_dssp             ----C--------------------------SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE
T ss_pred             ----c--------------------------CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE
Confidence                0                          04689999999999 9999999999999999988999999999999999


Q ss_pred             CCCCEEEEEEEec-CCCCceEEeCC-CcEEecCceEEEEEecCCceEEE
Q 003876          741 VAKGSKEISFGVD-PCEQLSIANKH-GRRILPLGNHVLMVGELRHSLTI  787 (790)
Q Consensus       741 ~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG~~s~~~~~  787 (790)
                      +||||++|+|+|+ . ++|++||+. ++|++|+|+|+|+||.||+++.+
T Consensus       783 ~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l  830 (845)
T 3abz_A          783 EPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILS  830 (845)
T ss_dssp             CTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEE
T ss_pred             CCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCcee
Confidence            9999999999999 7 689999996 78999999999999999998754
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A Back     alignment and structure
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans} Back     alignment and structure
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens} Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... Back     alignment and structure
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B* Back     alignment and structure
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B* Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 790
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 1e-37
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 1e-28
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  142 bits (359), Expect = 1e-37
 Identities = 84/415 (20%), Positives = 148/415 (35%), Gaps = 83/415 (20%)

Query: 52  YP-FCNTSLSISTRAKSLISLLTLQEKIQQLS---------------------DNASAIP 89
           Y  + + +  +  R   L+  +TL EKI Q++                         ++P
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 90  RLGIPAYEWWS----------ESLHGIAS--NGPGVNFNGTVSSVTSFPQVLVSAASFNR 137
           R G  A EW             +  GI        V+    V   T FP  +   A+ + 
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 138 SLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVE 197
            L   IG A A+E RA           +AP I + RDPRWGR  E+  ED  +V +   E
Sbjct: 122 YLVKRIGEATALEVRATGI-----QYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMT-E 175

Query: 198 FVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNF 257
            +   QG+  K    G+ F   + +V                +AC KH +       G  
Sbjct: 176 LIPGLQGDVPKDFTSGMPFVAGKNKV----------------AACAKHFVGDGGTVDG-- 217

Query: 258 SRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEW 317
                N +I  +   +   P +++ +++G ++ ++   +         +  +    ++  
Sbjct: 218 -INENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTL 276

Query: 318 GFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAD--------------------KGK 357
            FKG++ SD + +  I        ++   A+ +   D                     G 
Sbjct: 277 KFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGV 336

Query: 358 VQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQ 412
           +    ID A+  +  V+  +GLF              + +   EH+ LA +AAR+
Sbjct: 337 IPMSRIDDAVTRILRVKFTMGLFENPYADPAM----AEQLGKQEHRDLAREAARK 387
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query790
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 100.0
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 96.24
d4ubpb_122 Urease, beta-subunit {Bacillus pasteurii [TaxId: 1 87.84
d2q3za2114 Transglutaminase, two C-terminal domains {Human (H 85.39
d1ejxb_101 Urease, beta-subunit {Klebsiella aerogenes [TaxId: 85.1
d1e9ya1133 Urease, beta-subunit {Helicobacter pylori [TaxId: 84.01
d1g0da2112 Transglutaminase, two C-terminal domains {Red sea 80.88
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=1.8e-65  Score=569.54  Aligned_cols=318  Identities=28%  Similarity=0.468  Sum_probs=258.5

Q ss_pred             CC-ccCCCCCHHHHHHHHHhcCCHHHHHHhhcCC---------------------CCCc---------------------
Q 003876           52 YP-FCNTSLSISTRAKSLISLLTLQEKIQQLSDN---------------------ASAI---------------------   88 (790)
Q Consensus        52 ~~-~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~---------------------~~~i---------------------   88 (790)
                      +| |+||++|+++||++||++|||||||+||++.                     ...+                     
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            45 9999999999999999999999999999631                     1123                     


Q ss_pred             --ccCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeC
Q 003876           89 --PRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWA  166 (790)
Q Consensus        89 --~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~la  166 (790)
                        +++|||++ +..|.++|+..          ..+.|.||+++++|||||++|++++|+++|+|+|++   |+ +++ ||
T Consensus        82 ~~~~~giPll-i~~D~e~G~~~----------~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~---Gi-n~~-~a  145 (388)
T d1x38a1          82 MSTRLGIPMI-YGIDAVHGQNN----------VYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT---GI-QYA-FA  145 (388)
T ss_dssp             HTSSSCCCCE-EEECCSSSSTT----------STTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT---TC-CEE-CC
T ss_pred             HhccCCCCce-eecccccCccc----------ccccccchhhhhccccCCHHHHHHHHHHhhHHHHhc---CC-ccc-cC
Confidence              35567766 45566655432          224789999999999999999999999999999999   66 444 69


Q ss_pred             ceecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCC-CCCCCCCccceeeeecc
Q 003876          167 PNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFG-EESDRGDELMLSACCKH  245 (790)
Q Consensus       167 P~~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~v~a~~KH  245 (790)
                      |++||.|||+|||++|||||||+++++|+. +|.++|+....             -..+++- +....|    |+||+||
T Consensus       146 Pv~Dv~~~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~-------------~~~~G~~~~~~~~g----V~a~~KH  207 (388)
T d1x38a1         146 PCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPK-------------DFTSGMPFVAGKNK----VAACAKH  207 (388)
T ss_dssp             CBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCT-------------TCCTTCCCCCSTTS----CBCEEEE
T ss_pred             CcccccccccccccccCccCCHHHHHHHHh-hhhhhhchhhh-------------hhcccccccccccC----cceeeee
Confidence            999999999999999999999999999965 89999986211             0112211 011124    9999999


Q ss_pred             cccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeeeccccCCcccccCHHHHHH-HHHHhCCCcEEE
Q 003876          246 LIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYIT  324 (790)
Q Consensus       246 F~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~sy~~vng~pa~~s~~ll~~-LR~e~gF~G~Vv  324 (790)
                      |||||.+..+   ++..++.+++++|+|.||+||+.+|++|+. +|||+||.+||+|+|.|++++++ ||+||||+|+||
T Consensus       208 FpG~g~~~~~---~~~~~~~i~~~~l~~~~l~pf~~~i~~g~~-~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~Vv  283 (388)
T d1x38a1         208 FVGDGGTVDG---INENNTIINREGLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVI  283 (388)
T ss_dssp             ETTGGGCGGG---CTTCEECCCHHHHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEE
T ss_pred             eecCCccccC---ccccccchhHHHHHHHhhhhhHHHHhhccc-cccccccccCCccccCCHHHHHHHHHhccCCCceee
Confidence            9999976543   333456789999999999999999999987 99999999999999999999999 999999999999


Q ss_pred             ccchHHHHhhhccccCCCHHHHHHHHHHH----------------------hcCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 003876          325 SDCDAVATIFEYQNYTKTHEDSAAGVLKA----------------------DKGKVQEKDIDRALLNLFSVQLRLGLFNG  382 (790)
Q Consensus       325 SD~~~~~~~~~~~~~~~~~~~a~~~al~A----------------------~~g~i~~~~id~av~Ril~~k~~~Glf~~  382 (790)
                      |||++|.++...  +.....++++.++.|                      ++|+|+++|||+||+|||++|+++|||| 
T Consensus       284 SD~~~m~~~~~~--~~~~~~~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-  360 (388)
T d1x38a1         284 SDWEGIDRITTP--AGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-  360 (388)
T ss_dssp             CCTTTTGGGSSS--TTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-
T ss_pred             cchhhccccccc--cCCcHHHHHHHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-
Confidence            999999988642  223445555555555                      8999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCccCcHHHHHHHHHHHHhh
Q 003876          383 DPRKGKYGKLGPDDVCTSEHKKLALDAARQG  413 (790)
Q Consensus       383 ~p~~~~~~~~~~~~v~~~~h~~lA~e~A~es  413 (790)
                      +|+..+..   ...+++++|+++|+|+|+||
T Consensus       361 ~p~~~~~~---~~~i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         361 NPYADPAM---AEQLGKQEHRDLAREAARKS  388 (388)
T ss_dssp             CCSCCGGG---GGGTTCHHHHHHHHHHHHHH
T ss_pred             CCCCChhh---hhhcCCHHHHHHHHHHHhcC
Confidence            67543321   34578999999999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} Back     information, alignment and structure
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} Back     information, alignment and structure
>d1e9ya1 b.85.3.1 (A:106-238) Urease, beta-subunit {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]} Back     information, alignment and structure