Citrus Sinensis ID: 003883

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
ccccccccccccccccccccccccccccccHHHcccccccccccccHHHHHHHHHHHccEEEccccccHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEEccEEEEcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEc
ccccEEcccccccccccHHHHHHcccccHHHHccccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHEEEccccccHHHHHHHccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
maarveidednetnkgsMWVLdqkldqpmdEEAGRLRNMYREKKFSSLLLLRFAFQSLGVvygdlgtsplyvfyntfphgiddpeDIIGALSLIIYSLTLIPLLKYVFIVCrandsgqggtFALYSLLCRHAkvitipnqhrtdeelttysrstfhEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMvigdgiltpaisasggikvdhphmsnGVVVLVAVVILVGLFSlqhygtdrvgwLFAPIVLLWFLLIGGIGMLNIWKYDssvlkafspvYIYRYFrrggrdgwtslGGIMLSITGTEALFADlahfpvsaIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYrsipdsiywpVFIVATAAAIVASQATISATFSIIKQALAlgcfprvkvvhtskkflgqiyipdiNWILMILCIAVTagfknqsqignaYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFkvdqggwvPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILglgpslglvrvpgiGLVYTElasgvphifshfitnlpaiHSVVVFVCVkylpvytvpeeerflvkrigpknfhmFRCVArygykdlhkkdeNFEKKLFDSLFLFVRLEAMmegcsdsdeyslygqqtlqstdgllnnngnstssnqdltmssvdsivpvksplhvnstvmsssqmsshtetdELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICREnsvifnvphesllnvgqifyv
maarveidednetnkgsmwvldqkldqPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVitipnqhrtdeelttysrstfheKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPvytvpeeerflvkrigpknfhMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTvvrasrgskfyKKIAIDYIYAFLRKICRENSVIfnvphesllnvgqifyv
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGvvvlvavvilvglFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFivataaaivasqatisatFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGtavvivmlattllmtlimilvWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQstdgllnnngnstssnQDLTMSSVDSIVPVKSPLHVNstvmsssqmssHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
**************************************MYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSD***YSLY************************************************************LEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFY*
************************************************LLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDE**********************LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEA****************************************************************************FLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
*************NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNS***************ELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
***************************P*DE*************FSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME***************************************************HVNSTV*SSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
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MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query789 2.2.26 [Sep-21-2011]
O64769792 Potassium transporter 11 yes no 0.989 0.986 0.825 0.0
Q9SA05796 Potassium transporter 10 no no 0.994 0.986 0.808 0.0
Q8VXB1793 Putative potassium transp yes no 0.993 0.988 0.763 0.0
Q7XLC6791 Probable potassium transp yes no 0.992 0.989 0.773 0.0
Q653B6793 Potassium transporter 18 no no 0.992 0.987 0.733 0.0
O49423807 Potassium transporter 9 O no no 0.997 0.975 0.725 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.931 0.906 0.509 0.0
Q942X8783 Probable potassium transp no no 0.960 0.968 0.482 0.0
Q6H4R6877 Potassium transporter 23 no no 0.942 0.848 0.488 0.0
O80739827 Putative potassium transp no no 0.929 0.886 0.483 0.0
>sp|O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1 Back     alignment and function desciption
 Score = 1292 bits (3343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/800 (82%), Positives = 722/800 (90%), Gaps = 19/800 (2%)

Query: 1   MAARVE-------IDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRF 53
           MAARVE       IDE+    +GSMW LDQKLDQ MDEEAGRLRNMYREKKFS+LLLL+ 
Sbjct: 1   MAARVEAATMGGEIDEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQL 60

Query: 54  AFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRA 113
           +FQSLGVVYGDLGTSPLYVFYNTFPHGI DPEDIIGALSLIIYSLTLIPLLKYVF+VC+A
Sbjct: 61  SFQSLGVVYGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKA 120

Query: 114 NDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTF 173
           ND+GQGGTFALYSLLCRHAKV TI NQHRTDEELTTYSR+TFHE SFAAKTKRWLE +T 
Sbjct: 121 NDNGQGGTFALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRTS 180

Query: 174 RKNALLMLVLVGTCMVIGDGILTPAIS---ASGGIKVDHPHMSNGVVVLVAVVILVGLFS 230
           RK ALL+LVLVGTCMVIGDGILTPAIS   A+GG++V+ PH+SNGVVV VAVVILV LFS
Sbjct: 181 RKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLFS 240

Query: 231 LQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW 290
           +QHYGTDRVGWLFAPIV LWFL I  IGM NIWK+D+SVLKAFSPVYIYRYF+RGGRD W
Sbjct: 241 VQHYGTDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDRW 300

Query: 291 TSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVD 350
           TSLGGIMLSITG EALFADL+HFPVSA+QIAFTV+VFPCLLLAYSGQAAY+  + DHV D
Sbjct: 301 TSLGGIMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVAD 360

Query: 351 AFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLG 410
           AFYRSIP S+YWP+FI+ATAAAIVASQATISATFS++KQALA GCFPRVKVVHTS+KFLG
Sbjct: 361 AFYRSIPGSVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFLG 420

Query: 411 QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWI 470
           QIY+PDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVML TTLLMTLIMILVWRCHW+
Sbjct: 421 QIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHWV 480

Query: 471 LVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSK 530
           LVLIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAFL+IM+VWHYGT+KRYEFEMH +
Sbjct: 481 LVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCR 540

Query: 531 VSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPV 590
           VSMAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK LPV
Sbjct: 541 VSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLPV 600

Query: 591 YTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME- 649
           YTVPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD++FEK+LF+SLFL+VRLE+MME 
Sbjct: 601 YTVPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMMEG 660

Query: 650 GCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSS 709
           GCSDSD+YS+ G Q  Q  D L N N N   +  D T  S++SI PVK    V++TV +S
Sbjct: 661 GCSDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TFDSIESITPVK---RVSNTVTAS 715

Query: 710 SQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICREN 769
           SQMS     DELEF+N CRDAGVVHI+GNTVVRA R ++FYKKIAIDY+YAFLRKICRE+
Sbjct: 716 SQMSG---VDELEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICREH 772

Query: 770 SVIFNVPHESLLNVGQIFYV 789
           SVI+NVP ESLLNVGQIFYV
Sbjct: 773 SVIYNVPQESLLNVGQIFYV 792
Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SA05|POT10_ARATH Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2 Back     alignment and function description
>sp|Q8VXB1|HAK12_ORYSJ Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3 Back     alignment and function description
>sp|Q653B6|HAK18_ORYSJ Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1 Back     alignment and function description
>sp|O49423|POT9_ARATH Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function description
>sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query789
359472756790 PREDICTED: potassium transporter 11-like 0.997 0.996 0.890 0.0
224125216792 predicted protein [Populus trichocarpa] 1.0 0.996 0.883 0.0
356528128791 PREDICTED: potassium transporter 11-like 0.998 0.996 0.864 0.0
356510798791 PREDICTED: potassium transporter 11-like 0.998 0.996 0.862 0.0
224071529792 predicted protein [Populus trichocarpa] 1.0 0.996 0.867 0.0
348161633790 potassium trasporter 1 [Amaranthus sp. L 0.989 0.988 0.847 0.0
449454772791 PREDICTED: potassium transporter 11-like 0.997 0.994 0.861 0.0
398025471803 putative potassium transporter KUP11, pa 0.994 0.977 0.832 0.0
297737993743 unnamed protein product [Vitis vinifera] 0.937 0.995 0.844 0.0
356556167790 PREDICTED: probable potassium transporte 0.996 0.994 0.832 0.0
>gi|359472756|ref|XP_002276261.2| PREDICTED: potassium transporter 11-like [Vitis vinifera] gi|147778418|emb|CAN60810.1| hypothetical protein VITISV_036657 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1425 bits (3689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/792 (89%), Positives = 753/792 (95%), Gaps = 5/792 (0%)

Query: 1   MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGV 60
           MA+ +E +ED+E NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFS++LLLR AFQSLGV
Sbjct: 1   MASGIEFEEDSE-NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSAVLLLRLAFQSLGV 59

Query: 61  VYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGG 120
           VYGDLGTSPLYVFYNTFP GI+DPED++GALSLIIYSLTLIPLLKY+F+VCRAND+GQGG
Sbjct: 60  VYGDLGTSPLYVFYNTFPRGIEDPEDVVGALSLIIYSLTLIPLLKYIFVVCRANDNGQGG 119

Query: 121 TFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLM 180
           TFALYSLLCRHAK+ TIPNQHRTDEELTTYSR+TFHE S+AAKTKRWLE    RKN LL+
Sbjct: 120 TFALYSLLCRHAKINTIPNQHRTDEELTTYSRTTFHEHSYAAKTKRWLEGHASRKNMLLI 179

Query: 181 LVLVGTCMVIGDGILTPAIS---ASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTD 237
           LVLVGTCM+IGDGILTPAIS   A+GGIKVDHP MSN +VVLVAVVILVGLFS+QHYGTD
Sbjct: 180 LVLVGTCMLIGDGILTPAISVLSAAGGIKVDHPGMSNEIVVLVAVVILVGLFSMQHYGTD 239

Query: 238 RVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIM 297
           RVGWLFAPIVLLWFL+IGGIG+ NIWKYDSSVLKAFSPVYIYRYF+RGGRDGWTSLGGIM
Sbjct: 240 RVGWLFAPIVLLWFLVIGGIGIFNIWKYDSSVLKAFSPVYIYRYFKRGGRDGWTSLGGIM 299

Query: 298 LSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIP 357
           LSITGTEALFADLAHFPVSA+Q+AFTVVVFPCLLLAYSGQAAYL+ +QDHVVDAFYRSIP
Sbjct: 300 LSITGTEALFADLAHFPVSAVQLAFTVVVFPCLLLAYSGQAAYLVKNQDHVVDAFYRSIP 359

Query: 358 DSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 417
           DSIYWPVF+VATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI
Sbjct: 360 DSIYWPVFVVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 419

Query: 418 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTA 477
           NW+LM+LCIAVTAGFKNQSQIGNAYGTAVVIVMLATT LM LIM+LVWRCHW+LVLIFT 
Sbjct: 420 NWVLMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLATTFLMILIMLLVWRCHWLLVLIFTG 479

Query: 478 LSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWIL 537
           LSL VECTYFSAVLFKVDQGGWVPLVIAAAFL+IMYVWHYGTVKRYEFEMHSKVSMAWIL
Sbjct: 480 LSLAVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFEMHSKVSMAWIL 539

Query: 538 GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE 597
           GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE
Sbjct: 540 GLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEE 599

Query: 598 RFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEY 657
           RFLVKRIGPKNFHMFRCVARYGYKDLHKKD++FEKKLFD+LF+FVRLE+MMEGCSDSDEY
Sbjct: 600 RFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDNLFMFVRLESMMEGCSDSDEY 659

Query: 658 SLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTE 717
           SLYG QT QS D LLN+NGN+ SSN DLT+SSVDSIVPVKSPLH ++TV SS   S+ TE
Sbjct: 660 SLYG-QTEQSRDCLLNDNGNTNSSNLDLTISSVDSIVPVKSPLHASNTVTSSGHTSNQTE 718

Query: 718 TDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPH 777
            DELEF+N+CR AGVVHILGNTVVRA R S+FYKKIA+DYIYAFLRKICRENSVIFNVPH
Sbjct: 719 GDELEFMNNCRSAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPH 778

Query: 778 ESLLNVGQIFYV 789
           ESLLNVGQIFYV
Sbjct: 779 ESLLNVGQIFYV 790

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224125216|ref|XP_002329922.1| predicted protein [Populus trichocarpa] gi|222871159|gb|EEF08290.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356528128|ref|XP_003532657.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356510798|ref|XP_003524121.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|224071529|ref|XP_002303503.1| predicted protein [Populus trichocarpa] gi|222840935|gb|EEE78482.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|348161633|gb|AEP68018.1| potassium trasporter 1 [Amaranthus sp. LHY-2011] Back     alignment and taxonomy information
>gi|449454772|ref|XP_004145128.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] gi|449471385|ref|XP_004153294.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|398025471|gb|AFO70207.1| putative potassium transporter KUP11, partial [Alternanthera philoxeroides] Back     alignment and taxonomy information
>gi|297737993|emb|CBI27194.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356556167|ref|XP_003546398.1| PREDICTED: probable potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query789
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.989 0.984 0.749 0.0
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.989 0.981 0.740 0.0
TAIR|locus:2119812823 KUP9 "AT4G19960" [Arabidopsis 0.833 0.799 0.691 5.4e-253
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.783 0.783 0.487 6.3e-179
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.780 0.775 0.492 2.6e-171
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.954 0.910 0.433 2.4e-170
TAIR|locus:2045639712 KT1 "potassium transporter 1" 0.769 0.852 0.458 1.3e-169
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.956 0.966 0.453 4.5e-169
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.955 0.881 0.429 2.7e-167
TAIR|locus:2184722858 KUP7 "K+ uptake permease 7" [A 0.984 0.905 0.419 7.1e-164
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3101 (1096.7 bits), Expect = 0., P = 0.
 Identities = 600/801 (74%), Positives = 658/801 (82%)

Query:     1 MAARVE-------IDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRF 53
             MAARVE       IDE+    +GSMW LDQKLDQ MDEEAGRLRNMYREKKFS+LLLL+ 
Sbjct:     1 MAARVEAATMGGEIDEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQL 60

Query:    54 AFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRA 113
             +FQSLGVVYGDLGTSPLYVFYNTFPHGI DPEDIIGALSLIIYSLTLIPLLKYVF+VC+A
Sbjct:    61 SFQSLGVVYGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKA 120

Query:   114 NDSGQG-GTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQT 172
             ND+GQG GTFALYSLLCRHAKV TI NQHRTDEELTTYSR+TFHE SFAAKTKRWLE +T
Sbjct:   121 NDNGQGSGTFALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRT 180

Query:   173 FRKNALLMLVLVGTCMVIGDGILTPAIS---ASGGIKVDHPHMSNGXXXXXXXXXXXXXF 229
              RK ALL+LVLVGTCMVIGDGILTPAIS   A+GG++V+ PH+SNG             F
Sbjct:   181 SRKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLF 240

Query:   230 SLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDG 289
             S+QHYGTDRVGWLFAPIV LWFL I  IGM NIWK+D+SVLKAFSPVYIYRYF+RGGRD 
Sbjct:   241 SVQHYGTDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDR 300

Query:   290 WTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVV 349
             WTSLGGIMLSITG EALFADL+HFPVSA+QIAFTV+VFPCLLLAYSGQAAY+  + DHV 
Sbjct:   301 WTSLGGIMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVA 360

Query:   350 DAFYRSIPDSIYWPVFXXXXXXXXXXXXXXXXXXFSIIKQALALGCFPRVKVVHTSKKFL 409
             DAFYRSIP S+YWP+F                  FS++KQALA GCFPRVKVVHTS+KFL
Sbjct:   361 DAFYRSIPGSVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFL 420

Query:   410 GQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGXXXXXXXXXXXXXXXXXXXXXWRCHW 469
             GQIY+PDINWILMILCIAVTAGFKNQSQIGNAYG                     WRCHW
Sbjct:   421 GQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHW 480

Query:   470 ILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHS 529
             +LVLIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAFL+IM+VWHYGT+KRYEFEMH 
Sbjct:   481 VLVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHC 540

Query:   530 KVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLP 589
             +VSMAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK LP
Sbjct:   541 RVSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLP 600

Query:   590 VYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME 649
             VYTVPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD++FEK+LF+SLFL+VRLE+MME
Sbjct:   601 VYTVPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMME 660

Query:   650 G-CSDSDEYSLYGQQTLQXXXXXXXXXXXXXXXXQDLTMSSVDSIVPVKSPLHVNXXXXX 708
             G CSDSD+YS+ G Q  Q                 D T  S++SI PVK    V+     
Sbjct:   661 GGCSDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TFDSIESITPVK---RVSNTVTA 715

Query:   709 XXXXXXHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE 768
                       DELEF+N CRDAGVVHI+GNTVVRA R ++FYKKIAIDY+YAFLRKICRE
Sbjct:   716 SSQMSG---VDELEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICRE 772

Query:   769 NSVIFNVPHESLLNVGQIFYV 789
             +SVI+NVP ESLLNVGQIFYV
Sbjct:   773 HSVIYNVPQESLLNVGQIFYV 793
GO:0005737 "cytoplasm" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009555 "pollen development" evidence=IMP
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XLC6HAK11_ORYSJNo assigned EC number0.77340.99230.9898yesno
Q9SA05POT10_ARATHNo assigned EC number0.80870.99490.9861nono
O64769POT11_ARATHNo assigned EC number0.8250.98980.9861yesno
O49423POT9_ARATHNo assigned EC number0.72550.99740.9752nono
Q653B6HAK18_ORYSJNo assigned EC number0.73330.99230.9873nono
Q8VXB1HAK12_ORYSJNo assigned EC number0.76350.99360.9886yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query789
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-145
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 1e-97
COG0531466 COG0531, PotE, Amino acid transporters [Amino acid 2e-05
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information 
 Score = 1006 bits (2603), Expect = 0.0
 Identities = 445/782 (56%), Positives = 577/782 (73%), Gaps = 14/782 (1%)

Query: 12  ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLY 71
           E+N+G +W LDQ++ +P+  +A  +R+MY        +++  A+QSLGVVYGDLGTSPLY
Sbjct: 8   ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLY 67

Query: 72  VFYNTFPH-GIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCR 130
           VF +TF + G+ + +DIIGALSLIIY+LT+IPL+KYVFIV RAND+G+GG+FALYSLLCR
Sbjct: 68  VFKSTFANVGVKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCR 127

Query: 131 HAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVI 190
           +  +  +PNQH TD ELTTY     + K+     +R LE+    +N LL++VL+GTCMVI
Sbjct: 128 YCNISLLPNQHPTDVELTTYVVDNMNRKTR---IQRKLENSRVWQNVLLLIVLLGTCMVI 184

Query: 191 GDGILTPAIS---ASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 247
           GDGILTP+IS   A  GIK     +   +V +++ VILV LFSLQ +GT +V +LFAPI 
Sbjct: 185 GDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244

Query: 248 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALF 307
           L WF  +  IG  NI K+D SV  AF+P+YI  +F R GR GW SLGGI+L +TGTEA+F
Sbjct: 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMF 304

Query: 308 ADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIV 367
           ADL HF V ++QIAFT +V+PCLLL Y GQAAYL+ H + V D FYRS+P  IYWP+F++
Sbjct: 305 ADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVL 364

Query: 368 ATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIA 427
           AT +A++ASQA ISATFSI+KQA+ALGCFPRVK+VHTS K  GQ+YIP+INWILM+LC+ 
Sbjct: 365 ATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLV 424

Query: 428 VTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYF 487
           +TAGF++  +IGNAYG AVV VM+ TT LMTL+MI++WR H +L L+F  +  ++E  YF
Sbjct: 425 ITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYF 484

Query: 488 SAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVR 547
           SAVLFKV QGGWVPLVIAA F  +MY WHYGT KRY +EM  KVS+ W+LGLGPSLGLVR
Sbjct: 485 SAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVR 544

Query: 548 VPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPK 607
           VPGIGL+YT+LA GVP +FSHFITNLPAIHS VVFVC+KYLPV TVP++ERFL++RIGP+
Sbjct: 545 VPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPR 604

Query: 608 NFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQS 667
            + M+RC ARYGY DL KKD+NFE+ L  SL  F+ +E+  E     D  S+    T + 
Sbjct: 605 AYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQS---DLESMAASWTPEE 661

Query: 668 TDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSC 727
             G  N+ G+   +  D +  +  +    K P     +V   S  SS T+ DE+ FLN C
Sbjct: 662 LMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSV---SGHSSDTQ-DEVAFLNKC 717

Query: 728 RDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIF 787
           ++AGVV+ILGN  V+A + S F+KK+ I+YIY FLR+I R++ V+ N+PHE LL VG ++
Sbjct: 718 KEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVY 777

Query: 788 YV 789
           YV
Sbjct: 778 YV 779

Length = 779
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information
>gnl|CDD|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 789
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00149779 potassium transporter; Provisional 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 89.97
COG0531466 PotE Amino acid transporters [Amino acid transport 82.21
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.4e-256  Score=2167.18  Aligned_cols=769  Identities=48%  Similarity=0.855  Sum_probs=699.3

Q ss_pred             ccccccceeccccCCCCcchhhhhcccc--cccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEe
Q 003883           12 ETNKGSMWVLDQKLDQPMDEEAGRLRNM--YREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDII   88 (789)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vl   88 (789)
                      +..++||||+++++|+ ++.|+++++++  |+.++.++|.++.|||||+|||||||||||||||+++|++ +.+++|||+
T Consensus        63 ~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIl  141 (852)
T PLN00151         63 GNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVL  141 (852)
T ss_pred             cchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhhee
Confidence            4457899999999999 89999998877  4456778888899999999999999999999999999977 347999999


Q ss_pred             hhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhhhcccccccCCCCCCCccchhhccccccc-cchhhhHHHHH
Q 003883           89 GALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTKRW  167 (789)
Q Consensus        89 GvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~  167 (789)
                      |+|||||||||||+++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+.+.++ +.+++.++|++
T Consensus       142 GvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~  221 (852)
T PLN00151        142 GALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKER  221 (852)
T ss_pred             eehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988766 67778899999


Q ss_pred             hhhhhhhHHHHHHHHhHhhhhhhcCccccccc---cccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchh
Q 003883          168 LEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFA  244 (789)
Q Consensus       168 le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~  244 (789)
                      ||+|+++|.+++++|++|+||+||||||||||   |||||||++.|++++++||||||+||++||++||+||+|||++||
T Consensus       222 lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~Fg  301 (852)
T PLN00151        222 LETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFG  301 (852)
T ss_pred             hhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhc
Confidence            99999999999999999999999999999999   999999999999988999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhH
Q 003883          245 PIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTV  324 (789)
Q Consensus       245 PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~  324 (789)
                      |||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus       302 PImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~  381 (852)
T PLN00151        302 PALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTC  381 (852)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEec
Q 003883          325 VVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHT  404 (789)
Q Consensus       325 ~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhT  404 (789)
                      +|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+||
T Consensus       382 ~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHT  461 (852)
T PLN00151        382 LVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHT  461 (852)
T ss_pred             hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 003883          405 SKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVEC  484 (789)
Q Consensus       405 S~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~  484 (789)
                      |++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|+
T Consensus       462 S~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~  541 (852)
T PLN00151        462 SRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVEL  541 (852)
T ss_pred             CCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchh
Q 003883          485 TYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPH  564 (789)
Q Consensus       485 ~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~  564 (789)
                      +|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.+|+|+
T Consensus       542 ~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~  621 (852)
T PLN00151        542 VFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPA  621 (852)
T ss_pred             HHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999899999999999999999999


Q ss_pred             hHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-ChHHHHHHHHHHHHHHHH
Q 003883          565 IFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVR  643 (789)
Q Consensus       565 ~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~-~~~~fe~~lv~~L~~fI~  643 (789)
                      +|.||++|||++||++||||||++|+|+||++|||+++|+++++||+|||++||||||..+ ++++||++|+++|++|||
T Consensus       622 ~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~  701 (852)
T PLN00151        622 IFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIR  701 (852)
T ss_pred             HHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999986 789999999999999999


Q ss_pred             hhhhccCCC---CCC-------CccccccccccccccccCC--CCCCCCCCccccccccCCC-CCcCCCccccccccCcc
Q 003883          644 LEAMMEGCS---DSD-------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSSVDSI-VPVKSPLHVNSTVMSSS  710 (789)
Q Consensus       644 ~e~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~vrf~~~~~~~~  710 (789)
                      +|+.....+   +++       +++..........+.....  ......+........+.+. .+..++++|.      +
T Consensus       702 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  775 (852)
T PLN00151        702 REAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS------D  775 (852)
T ss_pred             hhhhhccccccccccccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc------c
Confidence            987432111   000       1111110000000000000  0000000000000000000 0001223331      1


Q ss_pred             cCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003883          711 QMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV  789 (789)
Q Consensus       711 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~V  789 (789)
                      .  +++++||+++|++|+|+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||++|+||||+|||
T Consensus       776 ~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        776 E--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             c--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            1  5789999999999999999999999999999999999999999999999999999999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query789
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.2 bits (124), Expect = 6e-07
 Identities = 66/441 (14%), Positives = 110/441 (24%), Gaps = 177/441 (40%)

Query: 7   IDEDNETNKGSMWVLDQKLDQPMD---------EEAGRL---------RNMYREKKFSSL 48
           ++E    N    +++     +            E+  RL          N+ R + +  L
Sbjct: 83  VEEVLRINYK--FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Query: 49  LLLRFAFQSLG-----VVYGDLGT--SPL-------YVFYNTFPHGI--------DDPED 86
              R A   L      ++ G LG+  + +       Y         I        + PE 
Sbjct: 141 ---RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 87  IIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEE 146
           ++  L  ++Y +                          ++    H+    I    R    
Sbjct: 198 VLEMLQKLLYQID-----------------------PNWTSRSDHSS--NIK--LRI-HS 229

Query: 147 LTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLML-----------------VLVGTCMV 189
           +    R     K +              +N LL+L                 +L+ T   
Sbjct: 230 IQAELRRLLKSKPY--------------ENCLLVLLNVQNAKAWNAFNLSCKILLTT--- 272

Query: 190 IGDGILTPAISASGGIKVDHPHMSNG-----VVVLVAVVILVGLFSLQHYGTDRVGWLFA 244
                +T  +SA+    +   H S       V  L+   +      L             
Sbjct: 273 -RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT-----N 326

Query: 245 PIVLLWFLLIGGIG-----MLNIWKY-------------DSSVLKAFSPVYIYRYFRRGG 286
           P        +  I       L  W               +SS L    P    + F    
Sbjct: 327 P------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFD--- 376

Query: 287 RDGWTSLGGIMLSITGTEALFADLAHFPVSAIQI------AFTVVVFPCLLLAYSGQAAY 340
                      LS+      F   AH P   + +         V+V    L  YS     
Sbjct: 377 ----------RLSV------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS----- 415

Query: 341 LMNHQDHVVDAFYRSIPDSIY 361
           L+  Q         SIP  IY
Sbjct: 416 LVEKQP---KESTISIPS-IY 432
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query789
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 95.87
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 95.86
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 94.28
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
Probab=95.87  E-value=0.071  Score=58.66  Aligned_cols=102  Identities=16%  Similarity=0.154  Sum_probs=54.3

Q ss_pred             EehhHHHHHHHHHhhhcccccccccchhhH----HHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhc--Cccee
Q 003883          217 VVLVAVVILVGLFSLQHYGTDRVGWLFAPI----VLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRG--GRDGW  290 (789)
Q Consensus       217 Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PI----m~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~--g~~g~  290 (789)
                      ...+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-++ .|+    +.+..+  +..+|
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~  204 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIE-MDS----KTFFPDFSKVGTL  204 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC-----------------CCCCCTTSTTTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-Ccc----cccCCCcccchHH
Confidence            456788888888899999988777654322    2223445556677665543332211 111    111111  23456


Q ss_pred             eeecceeeeeccccccccCCCCCC--Ccceehhhh
Q 003883          291 TSLGGIMLSITGTEALFADLAHFP--VSAIQIAFT  323 (789)
Q Consensus       291 ~~LG~v~L~iTGaEAlyADlGHFg--~~~Ir~aw~  323 (789)
                      ..+..++.+.+|-|+.-.=-+-.-  +|.+..|-.
T Consensus       205 ~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~  239 (511)
T 4djk_A          205 VVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML  239 (511)
T ss_dssp             TTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence            667778899999998644333332  344544433
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00