Citrus Sinensis ID: 003889

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79

MLSNHLQNGFETAKLVWSQIPNSEEAEHEGVGLLSTSGGSSSVESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFGYDTHARNI

cccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccccccEEEHHcccccEEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccHHHccccccEEEccccccHHHHHHHHHHcccccccEEEccccccccEEHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHcccEEEEEccccEEEEEEEHHHHHHHHcccccccccccHHHHHccccccccccccccccc

cccHHccccHHHHHHHHcccccccccccccccccccccccccccEccHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHHHHcccccccHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHcccccccccHcccccccccccccccccccccccccccHHHHHHHHccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccEEEEEEEccccccEEEccEEEHHHHHHHHHcccccccEEEcccccccccEEEEEHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccccccccccHcHccccccccccccccccEEcccccHHHHHHHHHHHcccEEEEEcccccEEEEEEcHHcHHHHccccccEEEEEccccccccccEEEEcccccccc

mlsnhlqngfETAKLVWsqipnseeaehEGVGLlstsggsssvesldyevIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVenfagwkfSLTFSIIQKSYFAGFLVYILINLILVFSSVYIItkfapaaagsgipeikgylngvdIHGILLFRTLIGKIFgsigsvggglalgkegplvhtGACIASllgqggstkyhLRYRWLQVfrsdrdrrdlvtcgCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAmgwcksgkcghfgsggfiiwdisdgqedysfeelLPMAVIGVIGGLLGALFNQLTLYMTSWRRnylhkkgnRVKIIEACVISVITSVIsfglpllrkcspcpesdldsgiecprppgmygnyvnfycskdkeyndLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGiavpagqfvpgimigstYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHlrgvpllesrpkykMRQMTAKEacgaqkvvslpriIKVADVVSILRtnkhngfpvidhsrngeRLVIGLVLRSHLLVLLQSkvdfqhsplpcdtrggskpishsfsefvkpasskglsiddihlssddMEMYidlgpflnpspyvvpedmslsKVYNLFRQLGLrhifvvprasrviglitrkdlliedgedsttvelqstsvrsLHCFTHifgydtharni

mlsnhlqnGFETAKLVWSQIPNSEEAEHEGVGLlstsggsssvESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLgqggstkyHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQahlrgvpllesrPKYKMRQMTAKEacgaqkvvslprIIKVADVVSILRTNKhngfpvidhsrngERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDTRGGSKPISHSFSEfvkpasskglSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLrhifvvprasrviglitrkdlliedgedSTTVelqstsvrslhcFTHIfgydtharni

MLSNHLQNGFETAKLVWSQIPNSEEAEHegvgllstsggsssveslDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLvtcgcaagvaaafrapvggvLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMavigviggllgalFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGlvlrshllvllQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGlsiddihlssddMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFGYDTHARNI

**************LVW****************************LDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLE****Y***QMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQH*********************************DIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFGYDT*****

******************************************VESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDG********************************

MLSNHLQNGFETAKLVWSQIPN********************VESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDTRGGSKPISHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFGYDTHARNI

*LS**LQNGFETAKLVWSQIP*******************SSVESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQH**************SHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFGYDTHAR**

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		788	2.2.26 [Sep-21-2011]
P92943		792	Chloride channel protein	yes	no	0.982	0.977	0.849	0.0
P92941		775	Chloride channel protein	no	no	0.876	0.891	0.456	1e-174
P92942		780	Chloride channel protein	no	no	0.879	0.888	0.455	1e-174
Q96282		779	Chloride channel protein	no	no	0.885	0.896	0.476	1e-173
P60300		765	Putative chloride channel	no	no	0.913	0.941	0.467	1e-173
P51799		803	H(+)/Cl(-) exchange trans	yes	no	0.865	0.849	0.382	1e-116
O70496		803	H(+)/Cl(-) exchange trans	yes	no	0.865	0.849	0.382	1e-116
Q86AZ6		815	Chloride channel protein	yes	no	0.876	0.847	0.349	1e-114
P51798		805	H(+)/Cl(-) exchange trans	yes	no	0.865	0.847	0.383	1e-112
Q4PKH3		809	H(+)/Cl(-) exchange trans	yes	no	0.865	0.843	0.375	1e-108

>sp\|P92943\|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2	Back alignment and function desciption

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/778 (84%), Positives = 709/778 (91%), Gaps = 4/778 (0%)

Query: 1   MLSNHLQNGFETAKLVWSQIPNSEEAEHEGVGLL-STSGGSSSVESLDYEVIENYAYREE 59
           MLSNHLQNG E+  L+WS++P S++   + + LL S   G   V SLDYEVIENYAYREE
Sbjct: 1   MLSNHLQNGIESDNLLWSRVPESDDTSTDDITLLNSHRDGDGGVNSLDYEVIENYAYREE 60

Query: 60  QAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAG 119
           QA RGKLYVGY V VKWFF+LLIGIGTGLAAVFIN+SVENFAGWKF+LTF+IIQKSYFAG
Sbjct: 61  QAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAG 120

Query: 120 FLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSI 179
           F+VY+LINL+LVFSS YIIT+FAPAAAGSGIPEIKGYLNG+DI G LLFRTLIGKIFGSI
Sbjct: 121 FIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSI 180

Query: 180 GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAA 239
           GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHL  RW Q+F+SDRDRRDLVTCGCAA
Sbjct: 181 GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDRRDLVTCGCAA 240

Query: 240 GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGS 299
           GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVR+AMGWCKSG CGHFG 
Sbjct: 241 GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGG 300

Query: 300 GGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVK 359
           GGFIIWD+SDGQ+DY F+ELLPMAVIGVIGGLLGALFNQLTLYMTSWRRN LHKKGNRVK
Sbjct: 301 GGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNSLHKKGNRVK 360

Query: 360 IIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYN 419
           IIEAC+IS ITS ISFGLPLLRKCSPCPES  DSGIECPRPPGMYGNYVNF+C  D EYN
Sbjct: 361 IIEACIISCITSAISFGLPLLRKCSPCPESVPDSGIECPRPPGMYGNYVNFFCKTDNEYN 420

Query: 420 DLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIM 479
           DLATIFFNTQDDAIRNLFSAKT+ E+SAQSLLTFL MFYTLAVVTFG AVPAGQFVPGIM
Sbjct: 421 DLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIM 480

Query: 480 IGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFL 539
           IGSTYGRLVGMFVV FYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLK L
Sbjct: 481 IGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLL 540

Query: 540 PLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLP 599
           PLIMLVLLISKAVGDAF+EGLYE QA L+G+PLLESRPKY MRQM AKEAC +QKV+SLP
Sbjct: 541 PLIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLP 600

Query: 600 RIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQHSPLPCD 659
           R+I+VADV SIL +NKHNGFPVIDH+R+GE LVIGLVLRSHLLVLLQSKVDFQHSPLPCD
Sbjct: 601 RVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD 660

Query: 660 TRGGSKPISHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLS 719
               ++ I HSFSEF KP SSKGL I+DIHL+SDD+EMYIDL PFLNPSPYVVPEDMSL+
Sbjct: 661 P--SARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLT 718

Query: 720 KVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVEL-QSTSVRSLHCFT 776
           KVYNLFRQLGLRH+FVVPR SRVIGLITRKDLLIE+  +S+ VEL QSTSVR  +  T
Sbjct: 719 KVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSET 776

Voltage-gated chloride channel.
Arabidopsis thaliana (taxid: 3702)

>sp\|P92941\|CLCA_ARATH Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2	Back alignment and function description

>sp\|P92942\|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1	Back alignment and function description

>sp\|Q96282\|CLCC_ARATH Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1	Back alignment and function description

>sp\|P60300\|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=CBSCLC6 PE=2 SV=2	Back alignment and function description

>sp\|P51799\|CLCN7_RAT H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1	Back alignment and function description

>sp\|O70496\|CLCN7_MOUSE H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1	Back alignment and function description

>sp\|Q86AZ6\|CLCB_DICDI Chloride channel protein B OS=Dictyostelium discoideum GN=clcB PE=3 SV=1	Back alignment and function description

>sp\|P51798\|CLCN7_HUMAN H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2	Back alignment and function description

>sp\|Q4PKH3\|CLCN7_BOVIN H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		788
255552337		794	chloride channel clc, putative [Ricinus	0.984	0.977	0.878	0.0
225432606		771	PREDICTED: chloride channel protein CLC-	0.978	1.0	0.889	0.0
297737022		800	unnamed protein product [Vitis vinifera]	0.977	0.962	0.888	0.0
356497470		801	PREDICTED: chloride channel protein CLC-	0.979	0.963	0.861	0.0
356541567		774	PREDICTED: chloride channel protein CLC-	0.973	0.990	0.857	0.0
224111216		752	Cl-channel clc-7 [Populus trichocarpa] g	0.954	1.0	0.889	0.0
357480813		799	Chloride channel protein CLC-d [Medicago	0.979	0.966	0.841	0.0
357480817		777	Chloride channel protein CLC-d [Medicago	0.973	0.987	0.843	0.0
357480815		847	Chloride channel protein CLC-d [Medicago	0.979	0.911	0.791	0.0
1742959		792	CLC-d chloride channel protein [Arabidop	0.982	0.977	0.849	0.0

>gi\|255552337\|ref\|XP_002517213.1\| chloride channel clc, putative [Ricinus communis] gi\|223543848\|gb\|EEF45376.1\| chloride channel clc, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1362 bits (3526), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/783 (87%), Positives = 727/783 (92%), Gaps = 7/783 (0%)

Query: 1   MLSNHLQNGFETAKLVWSQIPNSEEAEHEGVGLLSTSGGSSSVESLDYEVIENYAYREEQ 60
           MLSNHL NG ETAKLVWS+IP+SEE    GVGLL TS G+SS ESLDYE IENYAYREEQ
Sbjct: 1   MLSNHLNNGIETAKLVWSRIPHSEE----GVGLL-TSSGASSAESLDYEAIENYAYREEQ 55

Query: 61  AQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAGF 120
           AQRGKLY+GY V VKW FALLIGIGTGLAAVFIN+SVENFAGWKFSLTFSIIQKSYFAGF
Sbjct: 56  AQRGKLYIGYYVAVKWLFALLIGIGTGLAAVFINLSVENFAGWKFSLTFSIIQKSYFAGF 115

Query: 121 LVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIG 180
           ++Y+L NL LV+SSVYIIT+FAPAAAGSGIPEIKGYLNG+DI GILLFRTL+GKIFGSIG
Sbjct: 116 VLYVLFNLALVYSSVYIITQFAPAAAGSGIPEIKGYLNGIDIPGILLFRTLVGKIFGSIG 175

Query: 181 SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAG 240
           SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHL  RWLQVF+SDRDRRDLVTCGCAAG
Sbjct: 176 SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAG 235

Query: 241 VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGSG 300
           VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVR+AMGWCKSG CGHFGSG
Sbjct: 236 VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGNCGHFGSG 295

Query: 301 GFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLHKKGNRVKI 360
           GF+IWDISDGQEDYSF ELLPMAVIGVIGGLLGALFNQLTLY+T WRRNYLHKKGNRVKI
Sbjct: 296 GFVIWDISDGQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYITQWRRNYLHKKGNRVKI 355

Query: 361 IEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYND 420
           IEAC+ISVITS ISFGLPLLRKCSPCPE D D  IECPRPPGMYGNYVNFYC  +KEYND
Sbjct: 356 IEACLISVITSAISFGLPLLRKCSPCPEKDAD--IECPRPPGMYGNYVNFYCGTNKEYND 413

Query: 421 LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMI 480
           LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFG A+PAGQFVPGIMI
Sbjct: 414 LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGAAIPAGQFVPGIMI 473

Query: 481 GSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLP 540
           GSTYGRLVGMFVV FY K NIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLK LP
Sbjct: 474 GSTYGRLVGMFVVKFYNKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP 533

Query: 541 LIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLPR 600
           LIMLVLLISKAVGDAF+EGLYE QA LRG+PLLES+PKY+MR MTA+EACG QKVVS PR
Sbjct: 534 LIMLVLLISKAVGDAFNEGLYEVQARLRGIPLLESKPKYQMRTMTAREACGNQKVVSFPR 593

Query: 601 IIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDT 660
           + KVADVVSILR+NKHNGFPVIDH+RNGE LVIGL+LRSHLLVLLQSKVDFQHSPLPCD 
Sbjct: 594 VAKVADVVSILRSNKHNGFPVIDHTRNGETLVIGLMLRSHLLVLLQSKVDFQHSPLPCDP 653

Query: 661 RGGSKPISHSFSEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSK 720
           RGGS+ I H+FSEFVKP SSKG+ I+DIHLSSDD+EMYIDL PFLNPSPYVVPEDMSL+K
Sbjct: 654 RGGSRSIRHNFSEFVKPVSSKGICIEDIHLSSDDLEMYIDLAPFLNPSPYVVPEDMSLTK 713

Query: 721 VYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQSTSVRSLHCFTHIFG 780
           VYN+FRQLGLRHIFVVPRASRVIGLITRKDLLIED EDS  +ELQSTSVR+ H    +F 
Sbjct: 714 VYNIFRQLGLRHIFVVPRASRVIGLITRKDLLIEDHEDSANMELQSTSVRTHHQDKRMFT 773

Query: 781 YDT 783
            +T
Sbjct: 774 RNT 776

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225432606\|ref\|XP_002281606.1\| PREDICTED: chloride channel protein CLC-d [Vitis vinifera] gi\|301318138\|gb\|ADK66984.1\| chloride channel ClC6 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297737022\|emb\|CBI26223.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356497470\|ref\|XP_003517583.1\| PREDICTED: chloride channel protein CLC-d-like [Glycine max]	Back alignment and taxonomy information

>gi\|356541567\|ref\|XP_003539246.1\| PREDICTED: chloride channel protein CLC-d-like [Glycine max]	Back alignment and taxonomy information

>gi\|224111216\|ref\|XP_002315783.1\| Cl-channel clc-7 [Populus trichocarpa] gi\|222864823\|gb\|EEF01954.1\| Cl-channel clc-7 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|357480813\|ref\|XP_003610692.1\| Chloride channel protein CLC-d [Medicago truncatula] gi\|355512027\|gb\|AES93650.1\| Chloride channel protein CLC-d [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357480817\|ref\|XP_003610694.1\| Chloride channel protein CLC-d [Medicago truncatula] gi\|355512029\|gb\|AES93652.1\| Chloride channel protein CLC-d [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357480815\|ref\|XP_003610693.1\| Chloride channel protein CLC-d [Medicago truncatula] gi\|355512028\|gb\|AES93651.1\| Chloride channel protein CLC-d [Medicago truncatula]	Back alignment and taxonomy information

>gi\|1742959\|emb\|CAA96065.1\| CLC-d chloride channel protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		788
TAIR\|locus:2179724		792	CLC-D "chloride channel D" [Ar	0.982	0.977	0.772	0.0
TAIR\|locus:2158809		779	CLC-C "chloride channel C" [Ar	0.878	0.888	0.427	9.3e-146
TAIR\|locus:2095123		780	CLC-B "chloride channel B" [Ar	0.723	0.730	0.444	7e-143
TAIR\|locus:2164466		775	CLC-A "chloride channel A" [Ar	0.720	0.732	0.447	8.9e-143
ZFIN\|ZDB-GENE-061103-196		795	clcn7 "chloride channel 7" [Da	0.710	0.704	0.342	7.5e-101
UNIPROTKB\|F1NS73		802	CLCN7 "Uncharacterized protein	0.713	0.700	0.350	1.6e-98
DICTYBASE\|DDB_G0276865		815	clcB "CLC 6/7 family protein"	0.711	0.688	0.334	2.3e-97
UNIPROTKB\|E2R0Q0		747	CLCN7 "Uncharacterized protein	0.708	0.746	0.340	7.8e-95
MGI\|MGI:1347048		803	Clcn7 "chloride channel 7" [Mu	0.708	0.694	0.337	1.3e-94
RGD\|61836		803	Clcn7 "chloride channel, volta	0.708	0.694	0.337	1.3e-94

TAIR\|locus:2179724 CLC-D "chloride channel D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3076 (1087.9 bits), Expect = 0., P = 0.
 Identities = 601/778 (77%), Positives = 645/778 (82%)

Query:     1 MLSNHLQNGFETAKLVWSQIPNSEEAE-HXXXXXXXXXXXXXXXXXXDYEVIENYAYREE 59
             MLSNHLQNG E+  L+WS++P S++                      DYEVIENYAYREE
Sbjct:     1 MLSNHLQNGIESDNLLWSRVPESDDTSTDDITLLNSHRDGDGGVNSLDYEVIENYAYREE 60

Query:    60 QAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKSYFAG 119
             QA RGKLYVGY V VKWFF+LLIGIGTGLAAVFIN+SVENFAGWKF+LTF+IIQKSYFAG
Sbjct:    61 QAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAG 120

Query:   120 FLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSI 179
             F+VY+LINL+LVFSS YIIT+FAPAAAGSGIPEIKGYLNG+DI G LLFRTLIGKIFGSI
Sbjct:   121 FIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSI 180

Query:   180 GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLXXXXXXX 239
             GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHL  RW Q+F+SDRDRRDL       
Sbjct:   181 GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDRRDLVTCGCAA 240

Query:   240 XXXXXXXXXXXXXLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRSAMGWCKSGKCGHFGS 299
                          LFALEEVTSWWRSQLMWRVFFTSAIVAVVVR+AMGWCKSG CGHFG 
Sbjct:   241 GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGG 300

Query:   300 GGFIIWDISDGQEDYSFEELLPMXXXXXXXXXXXXXFNQLTLYMTSWRRNYLHKKGNRVK 359
             GGFIIWD+SDGQ+DY F+ELLPM             FNQLTLYMTSWRRN LHKKGNRVK
Sbjct:   301 GGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNSLHKKGNRVK 360

Query:   360 IIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYN 419
             IIEAC+IS ITS ISFGLPLLRKCSPCPES  DSGIECPRPPGMYGNYVNF+C  D EYN
Sbjct:   361 IIEACIISCITSAISFGLPLLRKCSPCPESVPDSGIECPRPPGMYGNYVNFFCKTDNEYN 420

Query:   420 DLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIM 479
             DLATIFFNTQDDAIRNLFSAKT+ E+SAQSLLTFL MFYTLAVVTFG AVPAGQFVPGIM
Sbjct:   421 DLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIM 480

Query:   480 IGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFL 539
             IGSTYGRLVGMFVV FYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLK L
Sbjct:   481 IGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLL 540

Query:   540 PLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGAQKVVSLP 599
             PLIMLVLLISKAVGDAF+EGLYE QA L+G+PLLESRPKY MRQM AKEAC +QKV+SLP
Sbjct:   541 PLIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLP 600

Query:   600 RIIKVADVVSILRTNKHNGFPVIDHSRNGERLVIGXXXXXXXXXXXQSKVDFQHSPLPCD 659
             R+I+VADV SIL +NKHNGFPVIDH+R+GE LVIG           QSKVDFQHSPLPCD
Sbjct:   601 RVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD 660

Query:   660 TRGGSKPISHSFSEFVKPASSKGXXXXXXXXXXXXMEMYIDLGPFLNPSPYVVPEDMSLS 719
                 ++ I HSFSEF KP SSKG            +EMYIDL PFLNPSPYVVPEDMSL+
Sbjct:   661 P--SARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLT 718

Query:   720 KVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLIEDGEDSTTVELQ-STSVRSLHCFT 776
             KVYNLFRQLGLRH+FVVPR SRVIGLITRKDLLIE+  +S+ VELQ STSVR  +  T
Sbjct:   719 KVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSET 776

GO:0005216 "ion channel activity" evidence=IEA

GO:0005247 "voltage-gated chloride channel activity" evidence=IEA;IGI

GO:0005253 "anion channel activity" evidence=ISS

GO:0006821 "chloride transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0030002 "cellular anion homeostasis" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0005622 "intracellular" evidence=IC

GO:0010038 "response to metal ion" evidence=IGI

TAIR\|locus:2158809 CLC-C "chloride channel C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2095123 CLC-B "chloride channel B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2164466 CLC-A "chloride channel A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-061103-196 clcn7 "chloride channel 7" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NS73 CLCN7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0276865 clcB "CLC 6/7 family protein" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R0Q0 CLCN7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1347048 Clcn7 "chloride channel 7" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|61836 Clcn7 "chloride channel, voltage-sensitive 7" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O70496	CLCN7_MOUSE	No assigned EC number	0.3824	0.8654	0.8493	yes	no
P92943	CLCD_ARATH	No assigned EC number	0.8496	0.9822	0.9772	yes	no
P51798	CLCN7_HUMAN	No assigned EC number	0.3838	0.8654	0.8472	yes	no
P51799	CLCN7_RAT	No assigned EC number	0.3824	0.8654	0.8493	yes	no
Q86AZ6	CLCB_DICDI	No assigned EC number	0.3493	0.8769	0.8478	yes	no
Q4PKH3	CLCN7_BOVIN	No assigned EC number	0.3755	0.8654	0.8430	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		788
cd03685		466	cd03685, ClC_6_like, ClC-6-like chloride channel p	1e-172
cd01036		416	cd01036, ClC_euk, Chloride channel, ClC	1e-115
cd03684		445	cd03684, ClC_3_like, ClC-3-like chloride channel p	1e-101
pfam00654		345	pfam00654, Voltage_CLC, Voltage gated chloride cha	4e-77
cd00400		383	cd00400, Voltage_gated_ClC, CLC voltage-gated chlo	4e-61
cd03685		466	cd03685, ClC_6_like, ClC-6-like chloride channel p	3e-58
COG0038		443	COG0038, EriC, Chloride channel protein EriC [Inor	7e-57
cd01031		402	cd01031, EriC, ClC chloride channel EriC	1e-51
cd03683		426	cd03683, ClC_1_like, ClC-1-like chloride channel p	3e-47
cd01036		416	cd01036, ClC_euk, Chloride channel, ClC	8e-42
PRK05277		438	PRK05277, PRK05277, chloride channel protein; Prov	2e-34
cd01034		390	cd01034, EriC_like, ClC chloride channel family	4e-26
cd04591		105	cd04591, CBS_pair_EriC_assoc_euk_bac, This cd cont	1e-23
cd03683		426	cd03683, ClC_1_like, ClC-1-like chloride channel p	3e-16
cd01033		388	cd01033, ClC_like, Putative ClC chloride channel	2e-10
cd03682		378	cd03682, ClC_sycA_like, ClC sycA-like chloride cha	4e-10
cd02205		113	cd02205, CBS_pair, The CBS domain, named after hum	5e-10
PRK01862		574	PRK01862, PRK01862, putative voltage-gated ClC-typ	9e-09
pfam00571		57	pfam00571, CBS, CBS domain	2e-08
cd04611		111	cd04611, CBS_pair_PAS_GGDEF_DUF1_assoc, This cd co	1e-06
pfam00654		345	pfam00654, Voltage_CLC, Voltage gated chloride cha	3e-06
PRK05277		438	PRK05277, PRK05277, chloride channel protein; Prov	8e-06
smart00116		49	smart00116, CBS, Domain in cystathionine beta-synt	9e-06
cd04586		135	cd04586, CBS_pair_BON_assoc, This cd contains two	2e-05
cd01033		388	cd01033, ClC_like, Putative ClC chloride channel	4e-05
cd04600		124	cd04600, CBS_pair_HPP_assoc, This cd contains two	5e-05
COG0038		443	COG0038, EriC, Chloride channel protein EriC [Inor	1e-04
cd02205		113	cd02205, CBS_pair, The CBS domain, named after hum	1e-04
PRK01610		418	PRK01610, PRK01610, putative voltage-gated ClC-typ	1e-04
cd04607		113	cd04607, CBS_pair_NTP_transferase_assoc, This cd c	2e-04
cd04640		126	cd04640, CBS_pair_27, The CBS domain, named after	5e-04
cd00400		383	cd00400, Voltage_gated_ClC, CLC voltage-gated chlo	0.001
cd04590		111	cd04590, CBS_pair_CorC_HlyC_assoc, This cd contain	0.001
cd04598		119	cd04598, CBS_pair_GGDEF_assoc, This cd contains tw	0.001
cd01034		390	cd01034, EriC_like, ClC chloride channel family	0.002
cd04612		111	cd04612, CBS_pair_SpoIVFB_EriC_assoc, This cd cont	0.002
cd04638		106	cd04638, CBS_pair_25, The CBS domain, named after	0.002
smart00116		49	smart00116, CBS, Domain in cystathionine beta-synt	0.003
cd04593		115	cd04593, CBS_pair_EriC_assoc_bac_arch, This cd con	0.003
COG0517		117	COG0517, COG0517, FOG: CBS domain [General functio	0.004
cd04803		122	cd04803, CBS_pair_15, The CBS domain, named after	0.004

>gnl\|CDD\|239657 cd03685, ClC_6_like, ClC-6-like chloride channel proteins	Back alignment and domain information

 Score =  504 bits (1299), Expect = e-172
 Identities = 187/338 (55%), Positives = 236/338 (69%), Gaps = 2/338 (0%)

Query: 44  ESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGW 103
           ESLDYEVIEN  +REE  +R K  V     +KW   LLIGI TGL A FI+++VEN AG 
Sbjct: 1   ESLDYEVIENDLFREEWRKRKKKQVLQYEFLKWIICLLIGIFTGLVAYFIDLAVENLAGL 60

Query: 104 KFSLTFSIIQKS-YFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDI 162
           KF +  + I+K   F  FLVY+ +NL+LV  +  ++   AP AAGSGIPE+KGYLNGV I
Sbjct: 61  KFLVVKNYIEKGRLFTAFLVYLGLNLVLVLVAALLVAYIAPTAAGSGIPEVKGYLNGVKI 120

Query: 163 HGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQV 222
             IL  +TL+ KI G I SV GGLALGKEGP++H GACIA+ L QGGST   L +RW + 
Sbjct: 121 PHILRLKTLLVKIVGVILSVSGGLALGKEGPMIHIGACIAAGLSQGGSTSLRLDFRWFRY 180

Query: 223 FRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVV 282
           FR+DRD+RD VTCG AAGVAAAF APVGGVLF+LEEV S+W   L WR FF+S IV   +
Sbjct: 181 FRNDRDKRDFVTCGAAAGVAAAFGAPVGGVLFSLEEVASFWNQALTWRTFFSSMIVTFTL 240

Query: 283 RSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLY 342
              +  C SGKCG FG GG I++D S  +  Y++ EL+P  +IGVIGGLLGALFN L   
Sbjct: 241 NFFLSGCNSGKCGLFGPGGLIMFDGSSTKYLYTYFELIPFMLIGVIGGLLGALFNHLNHK 300

Query: 343 MTSWRRNYLHKKGNRVKIIEACVISVITSVISFGLPLL 380
           +T +R+   H KG  +K++EA ++S++TSV++F   LL
Sbjct: 301 VTRFRKRINH-KGKLLKVLEALLVSLVTSVVAFPQTLL 337

This CD includes ClC-6, ClC-7 and ClC-B, C, D in plants. Proteins in this family are ubiquitous in eukarotes and their functions are unclear. They are expressed in intracellular organelles membranes. This family belongs to the ClC superfamily of chloride ion channels, which share the unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge. ClC chloride ion channel superfamily perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, and transepithelial transport in animals. Length = 466

>gnl\|CDD\|238507 cd01036, ClC_euk, Chloride channel, ClC	Back alignment and domain information

>gnl\|CDD\|239656 cd03684, ClC_3_like, ClC-3-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|216046 pfam00654, Voltage_CLC, Voltage gated chloride channel	Back alignment and domain information

>gnl\|CDD\|238233 cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239657 cd03685, ClC_6_like, ClC-6-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|223116 COG0038, EriC, Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238504 cd01031, EriC, ClC chloride channel EriC	Back alignment and domain information

>gnl\|CDD\|239655 cd03683, ClC_1_like, ClC-1-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|238507 cd01036, ClC_euk, Chloride channel, ClC	Back alignment and domain information

>gnl\|CDD\|235385 PRK05277, PRK05277, chloride channel protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238506 cd01034, EriC_like, ClC chloride channel family	Back alignment and domain information

>gnl\|CDD\|239964 cd04591, CBS_pair_EriC_assoc_euk_bac, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>gnl\|CDD\|239655 cd03683, ClC_1_like, ClC-1-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|238505 cd01033, ClC_like, Putative ClC chloride channel	Back alignment and domain information

>gnl\|CDD\|239654 cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|239067 cd02205, CBS_pair, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>gnl\|CDD\|234987 PRK01862, PRK01862, putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>gnl\|CDD\|201313 pfam00571, CBS, CBS domain	Back alignment and domain information

>gnl\|CDD\|239984 cd04611, CBS_pair_PAS_GGDEF_DUF1_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>gnl\|CDD\|216046 pfam00654, Voltage_CLC, Voltage gated chloride channel	Back alignment and domain information

>gnl\|CDD\|235385 PRK05277, PRK05277, chloride channel protein; Provisional	Back alignment and domain information

>gnl\|CDD\|214522 smart00116, CBS, Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>gnl\|CDD\|239959 cd04586, CBS_pair_BON_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	Back alignment and domain information

>gnl\|CDD\|238505 cd01033, ClC_like, Putative ClC chloride channel	Back alignment and domain information

>gnl\|CDD\|239973 cd04600, CBS_pair_HPP_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain	Back alignment and domain information

>gnl\|CDD\|223116 COG0038, EriC, Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|239067 cd02205, CBS_pair, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>gnl\|CDD\|234963 PRK01610, PRK01610, putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>gnl\|CDD\|239980 cd04607, CBS_pair_NTP_transferase_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream	Back alignment and domain information

>gnl\|CDD\|240011 cd04640, CBS_pair_27, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>gnl\|CDD\|238233 cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239963 cd04590, CBS_pair_CorC_HlyC_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain	Back alignment and domain information

>gnl\|CDD\|239971 cd04598, CBS_pair_GGDEF_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>gnl\|CDD\|238506 cd01034, EriC_like, ClC chloride channel family	Back alignment and domain information

>gnl\|CDD\|239985 cd04612, CBS_pair_SpoIVFB_EriC_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>gnl\|CDD\|240009 cd04638, CBS_pair_25, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>gnl\|CDD\|214522 smart00116, CBS, Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>gnl\|CDD\|239966 cd04593, CBS_pair_EriC_assoc_bac_arch, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in bacteria and archaea	Back alignment and domain information

>gnl\|CDD\|223591 COG0517, COG0517, FOG: CBS domain [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|240116 cd04803, CBS_pair_15, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		788
KOG0474		762	consensus Cl- channel CLC-7 and related proteins (	100.0
KOG0475		696	consensus Cl- channel CLC-3 and related proteins (	100.0
KOG0476		931	consensus Cl- channel CLC-2 and related proteins (	100.0
cd03685		466	ClC_6_like ClC-6-like chloride channel proteins. T	100.0
PRK01862		574	putative voltage-gated ClC-type chloride channel C	100.0
cd03684		445	ClC_3_like ClC-3-like chloride channel proteins. T	100.0
cd03683		426	ClC_1_like ClC-1-like chloride channel proteins. T	100.0
cd01036		416	ClC_euk Chloride channel, ClC. These domains are f	100.0
cd01031		402	EriC ClC chloride channel EriC. This domain is fou	100.0
PRK01610		418	putative voltage-gated ClC-type chloride channel C	100.0
PRK05277		438	chloride channel protein; Provisional	100.0
COG0038		443	EriC Chloride channel protein EriC [Inorganic ion	100.0
PF00654		355	Voltage_CLC: Voltage gated chloride channel Mutati	100.0
cd01034		390	EriC_like ClC chloride channel family. These prote	100.0
cd01033		388	ClC_like Putative ClC chloride channel. Clc protei	100.0
cd00400		383	Voltage_gated_ClC CLC voltage-gated chloride chann	100.0
cd03682		378	ClC_sycA_like ClC sycA-like chloride channel prote	100.0
PRK03655		414	putative ion channel protein; Provisional	100.0
COG3448		382	CBS-domain-containing membrane protein [Signal tra	99.72
cd01034		390	EriC_like ClC chloride channel family. These prote	99.68
cd01033		388	ClC_like Putative ClC chloride channel. Clc protei	99.67
PRK05277		438	chloride channel protein; Provisional	99.62
COG2524		294	Predicted transcriptional regulator, contains C-te	99.59
PRK10892		326	D-arabinose 5-phosphate isomerase; Provisional	99.56
PRK11543		321	gutQ D-arabinose 5-phosphate isomerase; Provisiona	99.55
cd00400		383	Voltage_gated_ClC CLC voltage-gated chloride chann	99.54
COG4109		432	Predicted transcriptional regulator containing CBS	99.53
PRK01862		574	putative voltage-gated ClC-type chloride channel C	99.52
PRK01610		418	putative voltage-gated ClC-type chloride channel C	99.52
cd03682		378	ClC_sycA_like ClC sycA-like chloride channel prote	99.45
COG3620		187	Predicted transcriptional regulator with C-termina	99.45
cd01031		402	EriC ClC chloride channel EriC. This domain is fou	99.44
cd04641		120	CBS_pair_28 The CBS domain, named after human CBS,	99.44
cd04618		98	CBS_pair_5 The CBS domain, named after human CBS,	99.43
cd04603		111	CBS_pair_KefB_assoc This cd contains two tandem re	99.43
cd04619		114	CBS_pair_6 The CBS domain, named after human CBS,	99.41
PRK07807		479	inosine 5-monophosphate dehydrogenase; Validated	99.39
PRK15094		292	magnesium/cobalt efflux protein CorC; Provisional	99.37
cd04631		125	CBS_pair_18 The CBS domain, named after human CBS,	99.36
cd04600		124	CBS_pair_HPP_assoc This cd contains two tandem rep	99.35
cd04639		111	CBS_pair_26 The CBS domain, named after human CBS,	99.35
TIGR03520		408	GldE gliding motility-associated protein GldE. Mem	99.35
cd04630		114	CBS_pair_17 The CBS domain, named after human CBS,	99.34
cd04605		110	CBS_pair_MET2_assoc This cd contains two tandem re	99.33
cd04586		135	CBS_pair_BON_assoc This cd contains two tandem rep	99.33
cd04596		108	CBS_pair_DRTGG_assoc This cd contains two tandem r	99.33
cd04617		118	CBS_pair_4 The CBS domain, named after human CBS,	99.32
cd04593		115	CBS_pair_EriC_assoc_bac_arch This cd contains two	99.32
cd04608		124	CBS_pair_PALP_assoc This cd contains two tandem re	99.31
cd04607		113	CBS_pair_NTP_transferase_assoc This cd contains tw	99.31
cd04595		110	CBS_pair_DHH_polyA_Pol_assoc This cd contains two	99.31
cd04627		123	CBS_pair_14 The CBS domain, named after human CBS,	99.31
cd04801		114	CBS_pair_M50_like This cd contains two tandem repe	99.3
cd04623		113	CBS_pair_10 The CBS domain, named after human CBS,	99.3
cd04613		114	CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two	99.3
cd04803		122	CBS_pair_15 The CBS domain, named after human CBS,	99.3
cd04583		109	CBS_pair_ABC_OpuCA_assoc2 This cd contains two tan	99.3
cd04624		112	CBS_pair_11 The CBS domain, named after human CBS,	99.28
PRK07107		502	inosine 5-monophosphate dehydrogenase; Validated	99.28
cd04629		114	CBS_pair_16 The CBS domain, named after human CBS,	99.28
cd04590		111	CBS_pair_CorC_HlyC_assoc This cd contains two tand	99.27
cd04588		110	CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains	99.27
cd04614		96	CBS_pair_1 The CBS domain, named after human CBS,	99.27
cd04636		132	CBS_pair_23 The CBS domain, named after human CBS,	99.26
cd04642		126	CBS_pair_29 The CBS domain, named after human CBS,	99.26
cd04626		111	CBS_pair_13 The CBS domain, named after human CBS,	99.26
TIGR00400		449	mgtE Mg2+ transporter (mgtE). This family of proka	99.26
cd04615		113	CBS_pair_2 The CBS domain, named after human CBS,	99.26
cd04635		122	CBS_pair_22 The CBS domain, named after human CBS,	99.26
cd04582		106	CBS_pair_ABC_OpuCA_assoc This cd contains two tand	99.25
TIGR01137		454	cysta_beta cystathionine beta-synthase. Members of	99.25
cd04643		116	CBS_pair_30 The CBS domain, named after human CBS,	99.24
cd04604		114	CBS_pair_KpsF_GutQ_assoc This cd contains two tand	99.24
cd04632		128	CBS_pair_19 The CBS domain, named after human CBS,	99.24
cd04611		111	CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two	99.24
cd04620		115	CBS_pair_7 The CBS domain, named after human CBS,	99.23
TIGR01303		475	IMP_DH_rel_1 IMP dehydrogenase family protein. Thi	99.23
cd04585		122	CBS_pair_ACT_assoc2 This cd contains two tandem re	99.23
cd04612		111	CBS_pair_SpoIVFB_EriC_assoc This cd contains two t	99.22
TIGR01302		450	IMP_dehydrog inosine-5'-monophosphate dehydrogenas	99.22
cd04599		105	CBS_pair_GGDEF_assoc2 This cd contains two tandem	99.22
cd04640		126	CBS_pair_27 The CBS domain, named after human CBS,	99.22
cd04621		135	CBS_pair_8 The CBS domain, named after human CBS,	99.22
cd04601		110	CBS_pair_IMPDH This cd contains two tandem repeats	99.22
cd04622		113	CBS_pair_9 The CBS domain, named after human CBS,	99.22
cd04637		122	CBS_pair_24 The CBS domain, named after human CBS,	99.21
cd04587		113	CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains	99.21
cd04591		105	CBS_pair_EriC_assoc_euk_bac This cd contains two t	99.21
cd04800		111	CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains	99.21
PF00654		355	Voltage_CLC: Voltage gated chloride channel Mutati	99.2
PRK05567		486	inosine 5'-monophosphate dehydrogenase; Reviewed	99.19
cd02205		113	CBS_pair The CBS domain, named after human CBS, is	99.19
cd04625		112	CBS_pair_12 The CBS domain, named after human CBS,	99.18
cd04602		114	CBS_pair_IMPDH_2 This cd contains two tandem repea	99.17
cd04589		111	CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains	99.17
cd04610		107	CBS_pair_ParBc_assoc This cd contains two tandem r	99.17
PRK14869		546	putative manganese-dependent inorganic pyrophospha	99.17
TIGR00393		268	kpsF KpsF/GutQ family protein. This model describe	99.17
cd04609		110	CBS_pair_PALP_assoc2 This cd contains two tandem r	99.16
COG0038		443	EriC Chloride channel protein EriC [Inorganic ion	99.16
cd04584		121	CBS_pair_ACT_assoc This cd contains two tandem rep	99.16
PLN02274		505	inosine-5'-monophosphate dehydrogenase	99.16
cd04606		109	CBS_pair_Mg_transporter This cd contains two tande	99.16
COG0517		117	FOG: CBS domain [General function prediction only]	99.16
PTZ00314		495	inosine-5'-monophosphate dehydrogenase; Provisiona	99.15
PRK03655		414	putative ion channel protein; Provisional	99.15
cd04802		112	CBS_pair_3 The CBS domain, named after human CBS,	99.15
cd04633		121	CBS_pair_20 The CBS domain, named after human CBS,	99.14
cd04594		104	CBS_pair_EriC_assoc_archaea This cd contains two t	99.14
cd03684		445	ClC_3_like ClC-3-like chloride channel proteins. T	99.13
PRK11573		413	hypothetical protein; Provisional	99.11
cd04638		106	CBS_pair_25 The CBS domain, named after human CBS,	99.09
cd04634		143	CBS_pair_21 The CBS domain, named after human CBS,	99.08
cd04598		119	CBS_pair_GGDEF_assoc This cd contains two tandem r	99.06
COG2905		610	Predicted signal-transduction protein containing c	99.02
COG1253		429	TlyC Hemolysins and related proteins containing CB	99.01
COG2239		451	MgtE Mg/Co/Ni transporter MgtE (contains CBS domai	99.0
cd03685		466	ClC_6_like ClC-6-like chloride channel proteins. T	99.0
cd01036		416	ClC_euk Chloride channel, ClC. These domains are f	98.9
COG4536		423	CorB Putative Mg2+ and Co2+ transporter CorB [Inor	98.85
PF00571		57	CBS: CBS domain CBS domain web page. Mutations in	98.81
cd04592		133	CBS_pair_EriC_assoc_euk This cd contains two tande	98.79
COG4535		293	CorC Putative Mg2+ and Co2+ transporter CorC [Inor	98.76
cd03683		426	ClC_1_like ClC-1-like chloride channel proteins. T	98.71
PF00571		57	CBS: CBS domain CBS domain web page. Mutations in	98.54
KOG1764		381	consensus 5'-AMP-activated protein kinase, gamma s	98.46
TIGR01186		363	proV glycine betaine/L-proline transport ATP bindi	98.45
PRK10070		400	glycine betaine transporter ATP-binding subunit; P	98.42
COG3448		382	CBS-domain-containing membrane protein [Signal tra	98.39
KOG2550		503	consensus IMP dehydrogenase/GMP reductase [Nucleot	98.28
cd04597		113	CBS_pair_DRTGG_assoc2 This cd contains two tandem	97.95
cd04597		113	CBS_pair_DRTGG_assoc2 This cd contains two tandem	97.87
PRK14869		546	putative manganese-dependent inorganic pyrophospha	97.83
TIGR00400		449	mgtE Mg2+ transporter (mgtE). This family of proka	97.75
COG3620		187	Predicted transcriptional regulator with C-termina	97.7
COG2524		294	Predicted transcriptional regulator, contains C-te	97.59
cd04641		120	CBS_pair_28 The CBS domain, named after human CBS,	97.56
cd04618		98	CBS_pair_5 The CBS domain, named after human CBS,	97.55
smart00116		49	CBS Domain in cystathionine beta-synthase and othe	97.54
cd04603		111	CBS_pair_KefB_assoc This cd contains two tandem re	97.5
KOG0475		696	consensus Cl- channel CLC-3 and related proteins (	97.49
cd04614		96	CBS_pair_1 The CBS domain, named after human CBS,	97.43
cd04619		114	CBS_pair_6 The CBS domain, named after human CBS,	97.41
cd04592		133	CBS_pair_EriC_assoc_euk This cd contains two tande	97.4
cd04608		124	CBS_pair_PALP_assoc This cd contains two tandem re	97.36
PRK05567		486	inosine 5'-monophosphate dehydrogenase; Reviewed	97.28
cd04617		118	CBS_pair_4 The CBS domain, named after human CBS,	97.26
PRK10892		326	D-arabinose 5-phosphate isomerase; Provisional	97.19
PRK11543		321	gutQ D-arabinose 5-phosphate isomerase; Provisiona	97.19
cd04582		106	CBS_pair_ABC_OpuCA_assoc This cd contains two tand	97.18
cd04605		110	CBS_pair_MET2_assoc This cd contains two tandem re	97.17
cd04624		112	CBS_pair_11 The CBS domain, named after human CBS,	97.16
cd04613		114	CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two	97.11
cd04607		113	CBS_pair_NTP_transferase_assoc This cd contains tw	97.1
cd04643		116	CBS_pair_30 The CBS domain, named after human CBS,	97.1
cd04623		113	CBS_pair_10 The CBS domain, named after human CBS,	97.07
cd04620		115	CBS_pair_7 The CBS domain, named after human CBS,	97.07
cd04600		124	CBS_pair_HPP_assoc This cd contains two tandem rep	97.06
cd04606		109	CBS_pair_Mg_transporter This cd contains two tande	97.06
cd04593		115	CBS_pair_EriC_assoc_bac_arch This cd contains two	97.06
cd04642		126	CBS_pair_29 The CBS domain, named after human CBS,	97.04
cd04585		122	CBS_pair_ACT_assoc2 This cd contains two tandem re	97.02
cd04596		108	CBS_pair_DRTGG_assoc This cd contains two tandem r	97.02
cd04615		113	CBS_pair_2 The CBS domain, named after human CBS,	97.0
cd04625		112	CBS_pair_12 The CBS domain, named after human CBS,	97.0
cd04640		126	CBS_pair_27 The CBS domain, named after human CBS,	96.99
cd04627		123	CBS_pair_14 The CBS domain, named after human CBS,	96.98
cd04632		128	CBS_pair_19 The CBS domain, named after human CBS,	96.97
cd04586		135	CBS_pair_BON_assoc This cd contains two tandem rep	96.97
TIGR01137		454	cysta_beta cystathionine beta-synthase. Members of	96.96
COG2905		610	Predicted signal-transduction protein containing c	96.95
cd04801		114	CBS_pair_M50_like This cd contains two tandem repe	96.95
cd04636		132	CBS_pair_23 The CBS domain, named after human CBS,	96.94
TIGR03415		382	ABC_choXWV_ATP choline ABC transporter, ATP-bindin	96.94
TIGR00393		268	kpsF KpsF/GutQ family protein. This model describe	96.94
cd04630		114	CBS_pair_17 The CBS domain, named after human CBS,	96.93
cd04610		107	CBS_pair_ParBc_assoc This cd contains two tandem r	96.92
cd04629		114	CBS_pair_16 The CBS domain, named after human CBS,	96.9
cd04621		135	CBS_pair_8 The CBS domain, named after human CBS,	96.89
cd04802		112	CBS_pair_3 The CBS domain, named after human CBS,	96.88
cd04588		110	CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains	96.88
cd04602		114	CBS_pair_IMPDH_2 This cd contains two tandem repea	96.86
cd04604		114	CBS_pair_KpsF_GutQ_assoc This cd contains two tand	96.86
cd04635		122	CBS_pair_22 The CBS domain, named after human CBS,	96.84
cd04639		111	CBS_pair_26 The CBS domain, named after human CBS,	96.84
cd04803		122	CBS_pair_15 The CBS domain, named after human CBS,	96.82
COG4175		386	ProV ABC-type proline/glycine betaine transport sy	96.82
cd04587		113	CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains	96.81
cd04609		110	CBS_pair_PALP_assoc2 This cd contains two tandem r	96.8
smart00116		49	CBS Domain in cystathionine beta-synthase and othe	96.79
cd04611		111	CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two	96.79
PRK07107		502	inosine 5-monophosphate dehydrogenase; Validated	96.78
cd04583		109	CBS_pair_ABC_OpuCA_assoc2 This cd contains two tan	96.78
cd04590		111	CBS_pair_CorC_HlyC_assoc This cd contains two tand	96.78
cd02205		113	CBS_pair The CBS domain, named after human CBS, is	96.76
cd04584		121	CBS_pair_ACT_assoc This cd contains two tandem rep	96.75
cd04601		110	CBS_pair_IMPDH This cd contains two tandem repeats	96.74
cd04622		113	CBS_pair_9 The CBS domain, named after human CBS,	96.74
cd04631		125	CBS_pair_18 The CBS domain, named after human CBS,	96.73
cd04626		111	CBS_pair_13 The CBS domain, named after human CBS,	96.72
cd04800		111	CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains	96.71
PRK07807		479	inosine 5-monophosphate dehydrogenase; Validated	96.71
KOG1764		381	consensus 5'-AMP-activated protein kinase, gamma s	96.69
cd04595		110	CBS_pair_DHH_polyA_Pol_assoc This cd contains two	96.69
cd04633		121	CBS_pair_20 The CBS domain, named after human CBS,	96.66
cd04589		111	CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains	96.65
TIGR01303		475	IMP_DH_rel_1 IMP dehydrogenase family protein. Thi	96.64
COG0517		117	FOG: CBS domain [General function prediction only]	96.64
cd04591		105	CBS_pair_EriC_assoc_euk_bac This cd contains two t	96.61
cd04612		111	CBS_pair_SpoIVFB_EriC_assoc This cd contains two t	96.6
cd04599		105	CBS_pair_GGDEF_assoc2 This cd contains two tandem	96.6
cd04594		104	CBS_pair_EriC_assoc_archaea This cd contains two t	96.57
cd04634		143	CBS_pair_21 The CBS domain, named after human CBS,	96.56
TIGR01302		450	IMP_dehydrog inosine-5'-monophosphate dehydrogenas	96.56
cd04637		122	CBS_pair_24 The CBS domain, named after human CBS,	96.48
cd04598		119	CBS_pair_GGDEF_assoc This cd contains two tandem r	96.42
COG4109		432	Predicted transcriptional regulator containing CBS	96.36
PLN02274		505	inosine-5'-monophosphate dehydrogenase	96.28
TIGR03520		408	GldE gliding motility-associated protein GldE. Mem	96.22
PTZ00314		495	inosine-5'-monophosphate dehydrogenase; Provisiona	96.06
PRK15094		292	magnesium/cobalt efflux protein CorC; Provisional	96.01
cd04638		106	CBS_pair_25 The CBS domain, named after human CBS,	95.86
COG2239		451	MgtE Mg/Co/Ni transporter MgtE (contains CBS domai	95.24
TIGR01186		363	proV glycine betaine/L-proline transport ATP bindi	94.71
PRK11573		413	hypothetical protein; Provisional	93.08
PRK10070		400	glycine betaine transporter ATP-binding subunit; P	93.06
KOG2550		503	consensus IMP dehydrogenase/GMP reductase [Nucleot	92.43
COG1253		429	TlyC Hemolysins and related proteins containing CB	90.89
KOG0474		762	consensus Cl- channel CLC-7 and related proteins (	90.8
KOG2118		498	consensus Predicted membrane protein, contains two	87.1
KOG0476		931	consensus Cl- channel CLC-2 and related proteins (	86.67
COG4535		293	CorC Putative Mg2+ and Co2+ transporter CorC [Inor	84.01
COG1125		309	OpuBA ABC-type proline/glycine betaine transport s	83.5
TIGR03415		382	ABC_choXWV_ATP choline ABC transporter, ATP-bindin	82.61

>KOG0474 consensus Cl- channel CLC-7 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=2.2e-158  Score=1277.22  Aligned_cols=691  Identities=54%  Similarity=0.910  Sum_probs=639.4

Q ss_pred             CCCCCCCcccccccchHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---
Q 003889           39 GSSSVESLDYEVIENYAYREEQAQRGKLYVGYSVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQKS---  115 (788)
Q Consensus        39 ~~~~~esldy~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~liGv~~Gl~~~~~~~~i~~~~~~~~~~~~~~~~~~---  115 (788)
                      ++++|||||||++||+.|+|+||.+++.+.++|...||+++++||+++|++|.++|..+|++.++|+..+.+.+.+.   
T Consensus        51 k~~~yESLDYei~ENdlf~e~~r~~~k~~~~~y~~~kW~~~~lIGi~TgLva~fidl~Ven~ag~Kf~~v~~~v~~~~s~  130 (762)
T KOG0474|consen   51 KVCDYESLDYEICENDLFLEDWRTRDKKKGRRYEAVKWMVCFLIGICTGLVALFIDLFVENFAGLKFGVVQNSVEECRSQ  130 (762)
T ss_pred             CCCCccccchhhhcchHHHHHHHhhcccceeeeehHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHhhhc
Confidence            78899999999999999999999999999999999999999999999999999999999999999999987776554   


Q ss_pred             ---hhhhHHHHHHHHHHHHHHHHHhhhccccccCCCCHHHHHHHHcCcccccchhhHHHHHHHHHHHHHhccCCcccccc
Q 003889          116 ---YFAGFLVYILINLILVFSSVYIITKFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEG  192 (788)
Q Consensus       116 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGipev~~~l~g~~~~~~l~~~~l~~K~~~~~lsv~sG~svG~EG  192 (788)
                         ++..++.|.+++++++++++.++.+++|.|+||||||||+||||+++|+.+++||+++|++|++++|++|+.+||||
T Consensus       131 ~g~~~~~~l~~~g~Nl~lv~~as~lv~~iaP~AAGSGIPevK~YLNGV~iP~ivrl~TL~~Ki~Gvi~sV~gGL~~GKEG  210 (762)
T KOG0474|consen  131 KGCLALSLLVLLGFNLVLVFLASVLVAYIAPVAAGSGIPEVKCYLNGVKIPGIVRLRTLIVKILGVIFSVAGGLAVGKEG  210 (762)
T ss_pred             cccHHHHHHHHHHHhHHHHHHHHHHHHeechhccCCCCchhhhhhcCccCcceeehhhhHHhHhhhhhhhhhhhhccCcC
Confidence               78899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhccCccccccccccccccCChhhhhhHHHHhhhhhhhhhhcCCccchhhhhhhhchhhhhhhHHHHH
Q 003889          193 PLVHTGACIASLLGQGGSTKYHLRYRWLQVFRSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVF  272 (788)
Q Consensus       193 P~vhiGa~igs~l~~~~~~~~~l~~~~~~~f~~~~~~r~li~~GaaAGvaaaF~APigGvlFalE~~~~~~~~~~~~~~~  272 (788)
                      ||||.|||||+.++|++|++++++|||+|+||||+||||+++||+|||+||+|+||+||+||++||.++||++.++||+|
T Consensus       211 PMIHsGa~Vaagl~QG~S~~~r~~~r~fr~FrnDrdrRD~VscGaAAGVaAAF~APvGGvLFaLEE~aS~Wnq~L~WR~f  290 (762)
T KOG0474|consen  211 PMIHSGSVVAAGLGQGGSTSLRKDWRWFRYFRNDRDRRDLVSCGAAAGVAAAFRAPVGGVLFALEEGASWWNQALLWRTF  290 (762)
T ss_pred             CeeehhHHHHhcccCCCccchhhhhhhhhhhcccchhhhhhhcchHHhHHHHhCCCccceEEEechhhHHHHhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCCCccccCCCceEEeeccCCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhc
Q 003889          273 FTSAIVAVVVRSAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNYLH  352 (788)
Q Consensus       273 ~~~~va~~v~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~~~~~~~l~~~i~lGv~~Gllg~~f~~~~~~~~~~~~~~~~  352 (788)
                      |++++++++++.++.+|.+|+|+.|+.+++++|++.+....|+.+|+++++++|++||++|++||++|....++++  .+
T Consensus       291 Fss~i~~f~l~~~i~~~~~G~~g~f~~~GLi~f~vf~~~~~y~~~el~~f~~iGViGGlLGalfN~Ln~~~~~~r~--~~  368 (762)
T KOG0474|consen  291 FSSAIVAFVLRAFILSCLSGKCGLFGKGGLINFDVFDGPVDYHIHELPPFLLIGVIGGLLGALFNYLNLKKVLRRY--NY  368 (762)
T ss_pred             HHhHHHHHhHHHHHHHHhcCchhccCCcceEEecccCCccccccccccceeEeehhhhhHHHHHHHHHHHHHHHHH--hc
Confidence            9999999999999999999999999999999999987777999999999999999999999999955544333333  45


Q ss_pred             ccCCcceeeehhHHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCccchhhhhhccCcHHH
Q 003889          353 KKGNRVKIIEACVISVITSVISFGLPLLRKCSPCPESDLDSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDA  432 (788)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~~~~~~~~p~~~g~~g~~~~~~c~~g~~y~~la~l~~~~~~~~  432 (788)
                      .|++..|++++++++++|+++.|.+|++++|+|||.+...  .+||          +|+||+|+ |||+|+++|||+||+
T Consensus       369 ~k~k~~kvlea~~Vs~~ts~~af~l~~l~~C~P~~~~~~~--~~~p----------~f~Cp~~~-YNdlAtL~fnt~dda  435 (762)
T KOG0474|consen  369 EKGKIGKVLEALLVSLVTSVLAFGLPFLADCQPCPPSITE--GQCP----------TFFCPDGE-YNDLATLFFNTNDDA  435 (762)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCCCccc--ccCc----------cccCCCCc-hhHHHHHHcCCcHHH
Confidence            6778889999999999999999999999999999974421  1555          48999999 999999999999999


Q ss_pred             HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHhcCCcCcccchhHHHHHHHHHHHHHHHHHHhhhcCCCchHHHHHHhhh
Q 003889          433 IRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGIAVPAGQFVPGIMIGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAA  512 (788)
Q Consensus       433 i~~l~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~l~g~~~~~~~~~~~~~~~~~aliGaa  512 (788)
                      ++++||.++ ++|++.+|.+|++.+++++++|||+.+|+|+|+|++++||++||++|+++..++   ++|||.||++|||
T Consensus       436 VrnLFh~~~-~ef~~~tL~iFfv~yf~L~~~TfGi~vpsGlFiP~iL~GAa~GRlvg~~l~~~~---~id~G~yAllGAA  511 (762)
T KOG0474|consen  436 VRNLFHSPT-NEFGILTLAIFFVLYFFLACWTFGIAVPSGLFIPVILTGAAYGRLVGMLLGSYT---NIDPGLYALLGAA  511 (762)
T ss_pred             HHHHhcCCC-CccchhHHHHHHHHHHHHHHHHhcccccccchhHHHHhhHHHHHHHHHHHHHhh---ccCchHHHHHhHH
Confidence            999999887 999999999999999999999999999999999999999999999999999888   8999999999999


Q ss_pred             hhhhhhcchhHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhCccHHHHHHHHcCCCCCCCCchhhhcccchhhhccC
Q 003889          513 SFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFSEGLYEEQAHLRGVPLLESRPKYKMRQMTAKEACGA  592 (788)
Q Consensus       513 a~l~g~~r~pis~~vi~~E~Tg~~~~l~pi~~~~~~a~~v~~~~~~~iy~~~l~~kg~p~l~~~~~~~l~~l~v~diM~~  592 (788)
                      |++||++|||+|++||++|+| +..+++|+|++.++|+||+|.||+++||.++++||+|++++++++++++++|+|+|++
T Consensus       512 a~LGG~mRMTvSL~VIl~E~T-n~~~~lPiMlvLliaK~VGD~FNegiYd~~i~LkgvP~Le~~pe~~mr~L~a~ev~~~  590 (762)
T KOG0474|consen  512 AFLGGVMRMTVSLCVILLELT-NNLLLLPIMLVLLIAKTVGDSFNEGIYDIIIQLKGVPFLEWEPEPYMRNLTAGEVMSK  590 (762)
T ss_pred             HHhCCeEEEEeeeehHHHHhh-hhhhhhHHHHHHHHHHHHHhhhhhhhHHHhhhccCCccccCCCchHhhhhhHhhhccC
Confidence            999999999999999999999 5678888899999999999999999999999999999999999999999999999999


Q ss_pred             CceEEecCcccHHHHHHHHhhCCCCeeEEeeCCCCC-CcEEEEEEeHHHHHHHHhcccccCCCCCCCCCCCCCCcccccc
Q 003889          593 QKVVSLPRIIKVADVVSILRTNKHNGFPVIDHSRNG-ERLVIGLVLRSHLLVLLQSKVDFQHSPLPCDTRGGSKPISHSF  671 (788)
Q Consensus       593 ~~vv~l~~~~tv~~a~~~L~~~~~~~fPVVd~~~~~-~~~lvGiI~r~dL~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (788)
                      | +++++..+++..++++|++++||+|||||++..+ .+++.|+|.|+||..+++++. |..+..+...+    +..+++
T Consensus       591 p-vi~l~~~ekV~~Iv~vLk~t~HngFPVvd~~~~~~~~~l~GlILRshl~vlL~~~~-f~~~~~~~~~~----~~~~~~  664 (762)
T KOG0474|consen  591 P-VICLNRVEKVAVIVDVLKSTNHNGFPVVDEPPSNEAGRLHGLILRSHLLVLLKKRV-FVEESRSTFDL----PVRRKF  664 (762)
T ss_pred             C-eEEEechhhHHHHHHHHHhcCcCCCccccCCCCccchhhhHHHHHHHHHHHHHhhh-hhccCccccCc----chhhcC
Confidence            9 9999999999999999999999999999995533 379999999999999999988 65443322221    111111


Q ss_pred             ccccccCCCCCCCccccccCccccccccCcccccCCCCceecCCCCHHHHHHHHHHcCCCEEEEecCCCeEEEEEeHhhh
Q 003889          672 SEFVKPASSKGLSIDDIHLSSDDMEMYIDLGPFLNPSPYVVPEDMSLSKVYNLFRQLGLRHIFVVPRASRVIGLITRKDL  751 (788)
Q Consensus       672 ~~~~~~~~~~~~~i~di~~~~~~~~~~idl~~~m~~~p~tV~~~~sl~~a~~lf~~~glr~lpVVd~~g~lvGIITr~DL  751 (788)
                      . ++ +..++.++++|++++++|+++++|++|+||++|++|++++|+.+++.+||+.|+||+.||++.++++|++||+|+
T Consensus       665 ~-~~-d~a~r~~~i~dv~lt~~e~~~yvDl~p~~n~sPytV~~~mSl~k~~~lFR~lGLRhLlVv~~~~~~~gilTR~D~  742 (762)
T KOG0474|consen  665 T-FR-DFAKREPSIEDVHLTSEEMEMYVDLHPFMNPSPYTVPETMSLAKAFILFRQLGLRHLLVVPKTNRVVGILTRKDL  742 (762)
T ss_pred             C-HH-HhhhcCCchhhhhcchHhHhhccccccccCCCCcccCcccchHHHHHHHHHhcceeEEEecCCCceeEEEehhhh
Confidence            1 11 112366789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcC
Q 003889          752 LIEDGE  757 (788)
Q Consensus       752 l~~~~~  757 (788)
                      .++...
T Consensus       743 ~~~~~l  748 (762)
T KOG0474|consen  743 ARYRIL  748 (762)
T ss_pred             hhHHHh
Confidence            987643

>KOG0475 consensus Cl- channel CLC-3 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0476 consensus Cl- channel CLC-2 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd03685 ClC_6_like ClC-6-like chloride channel proteins	Back alignment and domain information

>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>cd03684 ClC_3_like ClC-3-like chloride channel proteins	Back alignment and domain information

>cd03683 ClC_1_like ClC-1-like chloride channel proteins	Back alignment and domain information

>cd01036 ClC_euk Chloride channel, ClC	Back alignment and domain information

>cd01031 EriC ClC chloride channel EriC	Back alignment and domain information

>PRK01610 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>PRK05277 chloride channel protein; Provisional	Back alignment and domain information

>COG0038 EriC Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF00654 Voltage_CLC: Voltage gated chloride channel Mutation in several of these channels lead to human disease	Back alignment and domain information

>cd01034 EriC_like ClC chloride channel family	Back alignment and domain information

>cd01033 ClC_like Putative ClC chloride channel	Back alignment and domain information

>cd00400 Voltage_gated_ClC CLC voltage-gated chloride channel	Back alignment and domain information

>cd03682 ClC_sycA_like ClC sycA-like chloride channel proteins	Back alignment and domain information

>PRK03655 putative ion channel protein; Provisional	Back alignment and domain information

>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]	Back alignment and domain information

>cd01034 EriC_like ClC chloride channel family	Back alignment and domain information

>cd01033 ClC_like Putative ClC chloride channel	Back alignment and domain information

>PRK05277 chloride channel protein; Provisional	Back alignment and domain information

>COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription]	Back alignment and domain information

>PRK10892 D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>cd00400 Voltage_gated_ClC CLC voltage-gated chloride channel	Back alignment and domain information

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]	Back alignment and domain information

>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>PRK01610 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>cd03682 ClC_sycA_like ClC sycA-like chloride channel proteins	Back alignment and domain information

>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd01031 EriC ClC chloride channel EriC	Back alignment and domain information

>cd04641 CBS_pair_28 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism	Back alignment and domain information

>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK07807 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>PRK15094 magnesium/cobalt efflux protein CorC; Provisional	Back alignment and domain information

>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04600 CBS_pair_HPP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain	Back alignment and domain information

>cd04639 CBS_pair_26 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR03520 GldE gliding motility-associated protein GldE	Back alignment and domain information

>cd04630 CBS_pair_17 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain	Back alignment and domain information

>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	Back alignment and domain information

>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04593 CBS_pair_EriC_assoc_bac_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in bacteria and archaea	Back alignment and domain information

>cd04608 CBS_pair_PALP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream	Back alignment and domain information

>cd04595 CBS_pair_DHH_polyA_Pol_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain	Back alignment and domain information

>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50	Back alignment and domain information

>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04613 CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04583 CBS_pair_ABC_OpuCA_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK07107 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04590 CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain	Back alignment and domain information

>cd04588 CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the archaeal CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04636 CBS_pair_23 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04642 CBS_pair_29 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR00400 mgtE Mg2+ transporter (mgtE)	Back alignment and domain information

>cd04615 CBS_pair_2 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04635 CBS_pair_22 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04582 CBS_pair_ABC_OpuCA_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>TIGR01137 cysta_beta cystathionine beta-synthase	Back alignment and domain information

>cd04643 CBS_pair_30 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04604 CBS_pair_KpsF_GutQ_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein	Back alignment and domain information

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04611 CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein	Back alignment and domain information

>cd04585 CBS_pair_ACT_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>cd04612 CBS_pair_SpoIVFB_EriC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>cd04599 CBS_pair_GGDEF_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>cd04640 CBS_pair_27 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04601 CBS_pair_IMPDH This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04587 CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>cd04591 CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>cd04800 CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>PF00654 Voltage_CLC: Voltage gated chloride channel Mutation in several of these channels lead to human disease	Back alignment and domain information

>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed	Back alignment and domain information

>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04602 CBS_pair_IMPDH_2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04589 CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the bacterial CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream	Back alignment and domain information

>PRK14869 putative manganese-dependent inorganic pyrophosphatase; Provisional	Back alignment and domain information

>TIGR00393 kpsF KpsF/GutQ family protein	Back alignment and domain information

>cd04609 CBS_pair_PALP_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>COG0038 EriC Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd04584 CBS_pair_ACT_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>PLN02274 inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE	Back alignment and domain information

>COG0517 FOG: CBS domain [General function prediction only]	Back alignment and domain information

>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK03655 putative ion channel protein; Provisional	Back alignment and domain information

>cd04802 CBS_pair_3 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04633 CBS_pair_20 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea	Back alignment and domain information

>cd03684 ClC_3_like ClC-3-like chloride channel proteins	Back alignment and domain information

>PRK11573 hypothetical protein; Provisional	Back alignment and domain information

>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04634 CBS_pair_21 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	Back alignment and domain information

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]	Back alignment and domain information

>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd03685 ClC_6_like ClC-6-like chloride channel proteins	Back alignment and domain information

>cd01036 ClC_euk Chloride channel, ClC	Back alignment and domain information

>COG4536 CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF00571 CBS: CBS domain CBS domain web page	Back alignment and domain information

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes	Back alignment and domain information

>COG4535 CorC Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd03683 ClC_1_like ClC-1-like chloride channel proteins	Back alignment and domain information

>PF00571 CBS: CBS domain CBS domain web page	Back alignment and domain information

>KOG1764 consensus 5'-AMP-activated protein kinase, gamma subunit [Energy production and conversion]	Back alignment and domain information

>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit	Back alignment and domain information

>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional	Back alignment and domain information

>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]	Back alignment and domain information

>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]	Back alignment and domain information

>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>PRK14869 putative manganese-dependent inorganic pyrophosphatase; Provisional	Back alignment and domain information

>TIGR00400 mgtE Mg2+ transporter (mgtE)	Back alignment and domain information

>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	Back alignment and domain information

>COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd04641 CBS_pair_28 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>smart00116 CBS Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism	Back alignment and domain information

>KOG0475 consensus Cl- channel CLC-3 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes	Back alignment and domain information

>cd04608 CBS_pair_PALP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed	Back alignment and domain information

>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK10892 D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>cd04582 CBS_pair_ABC_OpuCA_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain	Back alignment and domain information

>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04613 CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream	Back alignment and domain information

>cd04643 CBS_pair_30 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04600 CBS_pair_HPP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain	Back alignment and domain information

>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE	Back alignment and domain information

>cd04593 CBS_pair_EriC_assoc_bac_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in bacteria and archaea	Back alignment and domain information

>cd04642 CBS_pair_29 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04585 CBS_pair_ACT_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04615 CBS_pair_2 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04640 CBS_pair_27 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	Back alignment and domain information

>TIGR01137 cysta_beta cystathionine beta-synthase	Back alignment and domain information

>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	Back alignment and domain information

>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50	Back alignment and domain information

>cd04636 CBS_pair_23 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein	Back alignment and domain information

>TIGR00393 kpsF KpsF/GutQ family protein	Back alignment and domain information

>cd04630 CBS_pair_17 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream	Back alignment and domain information

>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04802 CBS_pair_3 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04588 CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the archaeal CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04602 CBS_pair_IMPDH_2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04604 CBS_pair_KpsF_GutQ_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein	Back alignment and domain information

>cd04635 CBS_pair_22 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04639 CBS_pair_26 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]	Back alignment and domain information

>cd04587 CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>cd04609 CBS_pair_PALP_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>smart00116 CBS Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>cd04611 CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>PRK07107 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>cd04583 CBS_pair_ABC_OpuCA_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04590 CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain	Back alignment and domain information

>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04584 CBS_pair_ACT_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>cd04601 CBS_pair_IMPDH This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04800 CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>PRK07807 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>KOG1764 consensus 5'-AMP-activated protein kinase, gamma subunit [Energy production and conversion]	Back alignment and domain information

>cd04595 CBS_pair_DHH_polyA_Pol_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain	Back alignment and domain information

>cd04633 CBS_pair_20 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04589 CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the bacterial CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein	Back alignment and domain information

>COG0517 FOG: CBS domain [General function prediction only]	Back alignment and domain information

>cd04591 CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>cd04612 CBS_pair_SpoIVFB_EriC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04599 CBS_pair_GGDEF_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea	Back alignment and domain information

>cd04634 CBS_pair_21 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]	Back alignment and domain information

>PLN02274 inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>TIGR03520 GldE gliding motility-associated protein GldE	Back alignment and domain information

>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK15094 magnesium/cobalt efflux protein CorC; Provisional	Back alignment and domain information

>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit	Back alignment and domain information

>PRK11573 hypothetical protein; Provisional	Back alignment and domain information

>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional	Back alignment and domain information

>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]	Back alignment and domain information

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]	Back alignment and domain information

>KOG0474 consensus Cl- channel CLC-7 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG2118 consensus Predicted membrane protein, contains two CBS domains [Function unknown]	Back alignment and domain information

>KOG0476 consensus Cl- channel CLC-2 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG4535 CorC Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein	Back alignment and domain information

Homologous Structure Templates