Citrus Sinensis ID: 003901

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
ccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccEEccccEEEEEccccccEEEEEEEEccccccccEEEEEEccccccccccEEEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccHHHHHHccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEEccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEccccccccccccccEEEEEEEcccccEEEEEEccccccEEEEccccccccEEEEEEcccccccccccccccHHHHHHHcccccccccEEEEEccEEEEEEEcccccc
ccccccccccccccEEEEcccccccccccccccccccEEEcccccccccccccccccEEEcccEEEHccccccccccccccccccccEEEcccccccccccEccccEEEEEEEccccEEEEEEEcccccccccccEEEEccccccccccEEEEEEcccccccEEEEEEccccccccccccccccEEEcHHHHHHccccccccccccccccccccccEEEccccccccccccccccHHHccEEEEcHHHHHccccccccccccHHHHHcHHHHHHHccccEEEEccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccEcccccccccEEEEEcccccEEcEccccccEcccccccccEccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHHccccccccccccccccccccccccccccccHHHHHHHcccHHHccEEEEccccccccEEccccccccccHHHccccHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccEccccccEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccccccccEEEEEEccccccEEEEEEEcccccEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccEEccccEEEEEEEcccccc
mellqftsspllhgsskfinspefyksklsnlkkpptttfrccnhpnktshfansKAFENVTKNLVIRASKSAELETavikkpqsqrfqvskgyptpfgatlrdggvnfsIFSSNAVSATLCLITLsdlqenkvteEIALDSFANKTGDVWHVFLKGDfkdmlygykfdgkfspqeghyfdptkivldPYAKAVISraqfgvlgpdencwpqmaclvptpedefdwegdlplkypqrdlIIYEVHVrgftrhessktehpgtylGVVEKLDHLKDLginclelmpchefneleyfsynsvlgdynyssagirncghDAINEFKLLVREAHKRGIEVVMDVVFNHtvegndkgpilsfrgvdnsvyymlapkgefynysgcgntfncnhpVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRgsslwdsvnvygipiegdllttgtplrspplidlisndpilRGVKLIAEAWdtgglyqvgifphwgiwsewngKYRDIVRQFIKGTDGFAGAFAEclcgspnlyqgggrkpwnsinfvcahdgfsladlvsynqkhnlangednndgethnnswncgqegeFANILVKKLRRRQMRNFFLCLMVsqgvpmismgdeyghtkggnnntychdndinyfrwdkkeesksdfFRFCCLLTKFRHeceslglsdfptadrlqwhghapglpdwsdksRFVAFTLIDSVKGEIYVAFNashlpviislpkrpgyrweplvdtskpepfdflssdlpakEIAIKqyapfldanlypmlSYSSIILLLSPDENA
mellqftsspllhgsskfiNSPEFYKSKLSNLKKPPTTTFRCCNHPNKtshfanskafENVTKNLVIRASKSAELETAvikkpqsqrfqvskGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGftrhessktehpgtyLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHtvegndkgpilsfRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLangednndGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHApglpdwsdkSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANlypmlsyssiilllspDENA
**************************************TFRCCNH*****HFANSKAFENVTKNLVIRA********************VSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRH******HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQK*****************SWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL******
*******SSPL*******************************************************************************SKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIIL*LSP****
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFT********HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
********SPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRAS***************QRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNL**********THNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query788 2.2.26 [Sep-21-2011]
O04196783 Isoamylase 1, chloroplast yes no 0.907 0.913 0.763 0.0
Q9M0S5764 Isoamylase 3, chloroplast no no 0.869 0.896 0.436 1e-166
P0A4Y4721 Glycogen operon protein G yes no 0.681 0.744 0.428 1e-123
P0A4Y5721 Glycogen operon protein G yes no 0.681 0.744 0.428 1e-123
Q6CZK1658 Glycogen debranching enzy yes no 0.800 0.958 0.356 1e-106
B2K6G0662 Glycogen debranching enzy yes no 0.678 0.808 0.376 1e-104
A9R5L9662 Glycogen debranching enzy yes no 0.678 0.808 0.376 1e-104
A4TQV1662 Glycogen debranching enzy yes no 0.678 0.808 0.376 1e-104
Q1CDL4662 Glycogen debranching enzy yes no 0.678 0.808 0.376 1e-104
Q8ZA76662 Glycogen debranching enzy yes no 0.678 0.808 0.376 1e-104
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function desciption
 Score = 1204 bits (3115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/735 (76%), Positives = 642/735 (87%), Gaps = 20/735 (2%)

Query: 68  RASKSAELETAVIKKP-QSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITL 126
           R S  AE   AV++KP +S RF +S G P+PFG T+RD GVNFS++S+N+VSAT+CLI+L
Sbjct: 47  RRSNEAE-NIAVVEKPLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNSVSATICLISL 105

Query: 127 SDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIV 186
           SDL++NKVTEEI LD   N+TG VWHVFL+GDFKDMLYGY+FDGKFSP+EGHY+D + I+
Sbjct: 106 SDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNIL 165

Query: 187 LDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHV 246
           LDPYAKA+ISR +FGVLGPD+NCWPQMAC+VPT E+EFDWEGD+ LK PQ+DL+IYE+HV
Sbjct: 166 LDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTREEEFDWEGDMHLKLPQKDLVIYEMHV 225

Query: 247 RGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYN- 305
           RGFTRHESSK E PGTY GV EKLDHLK+LGINC+ELMPCHEFNELEY+SYN++LGD+  
Sbjct: 226 RGFTRHESSKIEFPGTYQGVAEKLDHLKELGINCIELMPCHEFNELEYYSYNTILGDHRV 285

Query: 306 ----------------YSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGN 349
                           Y+SA   N    AINEFK+LV+EAHKRGIEV+MDVV NHT EGN
Sbjct: 286 NFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLNHTAEGN 345

Query: 350 DKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVD 409
           +KGPI SFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWVTEMHVD
Sbjct: 346 EKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVD 405

Query: 410 GFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIA 469
           GFRFDL SIM+R SSLWD+ NVYG  +EGDLLTTGTP+  PP+ID+ISNDPILRGVKLIA
Sbjct: 406 GFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIA 465

Query: 470 EAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGG 529
           EAWD GGLYQVG+FPHWGIWSEWNGK+RD+VRQFIKGTDGF+GAFAECLCGSPNLYQGG 
Sbjct: 466 EAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGG- 524

Query: 530 RKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVK 589
           RKPW+SINF+CAHDGF+LADLV+YN K+NLANGE+NNDGE HN SWNCG+EG+FA+I VK
Sbjct: 525 RKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVK 584

Query: 590 KLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSD 649
           +LR+RQMRNFF+ LMVSQGVPMI MGDEYGHTKGGNNNTYCHDN +NYFRWDKKEE+ SD
Sbjct: 585 RLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSD 644

Query: 650 FFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEI 709
           FFRFC +L KFR ECESLGL+DFPTA RLQWHG AP +P+WS+ SRFVAF+L+DSVK EI
Sbjct: 645 FFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEI 704

Query: 710 YVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANL 769
           YVAFN SHL  ++SLP RPGYRWEP VDTSKP P+D ++ DLP +E A+KQY  FLDAN+
Sbjct: 705 YVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDANV 764

Query: 770 YPMLSYSSIILLLSP 784
           YPMLSYSSIILLLSP
Sbjct: 765 YPMLSYSSIILLLSP 779
Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 6EC: 8
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q6CZK1|GLGX_ERWCT Glycogen debranching enzyme OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B2K6G0|GLGX_YERPB Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A9R5L9|GLGX_YERPG Glycogen debranching enzyme OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A4TQV1|GLGX_YERPP Glycogen debranching enzyme OS=Yersinia pestis (strain Pestoides F) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q1CDL4|GLGX_YERPN Glycogen debranching enzyme OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q8ZA76|GLGX_YERPE Glycogen debranching enzyme OS=Yersinia pestis GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query788
224142633801 predicted protein [Populus trichocarpa] 0.977 0.961 0.763 0.0
139867053791 isoamylase-type starch-debranching enzym 0.928 0.925 0.790 0.0
359484905748 PREDICTED: isoamylase 1, chloroplastic-l 0.922 0.971 0.790 0.0
224087162826 predicted protein [Populus trichocarpa] 0.959 0.915 0.743 0.0
296090473809 unnamed protein product [Vitis vinifera] 0.964 0.939 0.757 0.0
356527718796 PREDICTED: isoamylase 1, chloroplastic-l 0.918 0.909 0.783 0.0
255578059795 isoamylase, putative [Ricinus communis] 0.888 0.880 0.799 0.0
449463916810 PREDICTED: isoamylase 1, chloroplastic-l 0.912 0.887 0.771 0.0
449507370810 PREDICTED: isoamylase 1, chloroplastic-l 0.912 0.887 0.771 0.0
27728145793 isoamylase isoform 1 [Solanum tuberosum] 0.920 0.914 0.767 0.0
>gi|224142633|ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|222866093|gb|EEF03224.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1280 bits (3313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/800 (76%), Positives = 687/800 (85%), Gaps = 30/800 (3%)

Query: 11  LLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFAN--SKAFENVTKNLVIR 68
           LLH +S  ++  +F    +S  +  P     C    N TS+  N  S  F N T ++ I+
Sbjct: 3   LLHSTSHSVHVLKF----ISQFRSTPKF---CLLKRNVTSNLENFGSNLFSNSTASISIK 55

Query: 69  ASKSAELETAVI---KKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLIT 125
           A++   ++TAV+   + P+ ++FQV +G+P+PFGAT+RDGGVNF+IFS+NAVSATLCLI+
Sbjct: 56  AARDG-VDTAVVVEEEGPKLRKFQVFEGHPSPFGATVRDGGVNFAIFSANAVSATLCLIS 114

Query: 126 LSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKI 185
           LSDL EN+VTE+  LD   NKTGDVWHV LKGDFKDMLYGYKFDG FSP+EGHY+DP++I
Sbjct: 115 LSDLPENRVTEQFFLDPLTNKTGDVWHVHLKGDFKDMLYGYKFDGSFSPEEGHYYDPSQI 174

Query: 186 VLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVH 245
           VLDPYAKAVISR  FGVLG D+NCWPQMAC++PT +D+FDWEGD  LKYPQRDLI+YE+H
Sbjct: 175 VLDPYAKAVISRGDFGVLGSDDNCWPQMACMIPTADDKFDWEGDSLLKYPQRDLILYEMH 234

Query: 246 VRGFTRHESSKTEHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYN 305
           VRGFT+HESS+TE PGTYLGVVEKL HLK+LG+NC+ELMPCHEFNELEY+ YNSV GDY 
Sbjct: 235 VRGFTQHESSRTEFPGTYLGVVEKLGHLKELGVNCIELMPCHEFNELEYYDYNSVFGDYK 294

Query: 306 -----------------YSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEG 348
                            YSSAG  NCGHDAINEFKLLVREAHKRGIEV MDVVFNHT EG
Sbjct: 295 VNFWGYSTVNYFSPMTRYSSAGTLNCGHDAINEFKLLVREAHKRGIEVFMDVVFNHTAEG 354

Query: 349 NDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHV 408
           N++GPILSF+GVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWV EMHV
Sbjct: 355 NERGPILSFKGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVIEMHV 414

Query: 409 DGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLI 468
           DGFRFDLASIMTR SSLWD+VNV+G PIEGDL+TTGTPL SPPLI+++SNDPILR VKLI
Sbjct: 415 DGFRFDLASIMTRSSSLWDAVNVFGSPIEGDLVTTGTPLGSPPLIEMMSNDPILRDVKLI 474

Query: 469 AEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGG 528
           AEAWD GGLYQVG+FPHW IWSEWNGKYRDIVRQFIKGTDGF+GAFAECLCGSP LYQ G
Sbjct: 475 AEAWDAGGLYQVGMFPHWHIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPGLYQEG 534

Query: 529 GRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILV 588
           GRKPWNSINFVCAHDGF+LADLV+YN+KHNLANGEDNNDGE HNNSWNCGQEGE A+I V
Sbjct: 535 GRKPWNSINFVCAHDGFTLADLVTYNEKHNLANGEDNNDGENHNNSWNCGQEGELASISV 594

Query: 589 KKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKS 648
           KKLR+RQMRNFFLCLMVSQGVPMI MGDEYGHTKGGNNNTYCHDN INYF WDKKEES S
Sbjct: 595 KKLRKRQMRNFFLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYINYFWWDKKEESSS 654

Query: 649 DFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGE 708
           DFFRFC L+TKFRHECESLGL+DFPTA+RLQWHGHAPG PDWS+ SRFVAFTLIDSVK E
Sbjct: 655 DFFRFCRLMTKFRHECESLGLNDFPTAERLQWHGHAPGTPDWSETSRFVAFTLIDSVKRE 714

Query: 709 IYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDAN 768
           IY+AFNASHL V I+LP+RP YRWEPLVDT KP PFDFLS DLP ++ A+KQY+ FL+AN
Sbjct: 715 IYIAFNASHLSVTITLPERPAYRWEPLVDTGKPAPFDFLSGDLPERDTAMKQYSHFLEAN 774

Query: 769 LYPMLSYSSIILLLSPDENA 788
           LYPMLSYSSIIL+L P +NA
Sbjct: 775 LYPMLSYSSIILVLLPVDNA 794

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|139867053|dbj|BAF52941.1| isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|359484905|ref|XP_002265964.2| PREDICTED: isoamylase 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224087162|ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|222854066|gb|EEE91613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090473|emb|CBI40669.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356527718|ref|XP_003532455.1| PREDICTED: isoamylase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255578059|ref|XP_002529900.1| isoamylase, putative [Ricinus communis] gi|223530627|gb|EEF32503.1| isoamylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449463916|ref|XP_004149676.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449507370|ref|XP_004163012.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|27728145|gb|AAN15317.1| isoamylase isoform 1 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query788
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.605 0.609 0.776 0.0
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.842 0.869 0.448 2.7e-155
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.243 0.256 0.497 1.6e-102
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.243 0.256 0.497 1.6e-102
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.411 0.493 0.374 2e-100
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.355 0.426 0.392 4.8e-87
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.355 0.426 0.392 4.8e-87
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.233 0.208 0.419 4.3e-63
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.315 0.349 0.310 3.3e-29
TIGR_CMR|BA_4953713 BA_4953 "pullulanase, putative 0.315 0.349 0.310 3.3e-29
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2114 (749.2 bits), Expect = 0., Sum P(2) = 0.
 Identities = 375/483 (77%), Positives = 426/483 (88%)

Query:   290 NELEYFSYNSVLGDYN----YSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHT 345
             + + ++ Y S +G ++    Y+SA   N    AINEFK+LV+EAHKRGIEV+MDVV NHT
Sbjct:   283 HRVNFWGY-STIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLNHT 341

Query:   346 VEGNDKGPILSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTE 405
              EGN+KGPI SFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWVTE
Sbjct:   342 AEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTE 401

Query:   406 MHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGV 465
             MHVDGFRFDL SIM+R SSLWD+ NVYG  +EGDLLTTGTP+  PP+ID+ISNDPILRGV
Sbjct:   402 MHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTGTPISCPPVIDMISNDPILRGV 461

Query:   466 KLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLY 525
             KLIAEAWD GGLYQVG+FPHWGIWSEWNGK+RD+VRQFIKGTDGF+GAFAECLCGSPNLY
Sbjct:   462 KLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLY 521

Query:   526 QGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFAN 585
             QGG RKPW+SINF+CAHDGF+LADLV+YN K+NLANGE+NNDGE HN SWNCG+EG+FA+
Sbjct:   522 QGG-RKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFAS 580

Query:   586 ILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEE 645
             I VK+LR+RQMRNFF+ LMVSQGVPMI MGDEYGHTKGGNNNTYCHDN +NYFRWDKKEE
Sbjct:   581 ISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEE 640

Query:   646 SKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSV 705
             + SDFFRFC +L KFR ECESLGL+DFPTA RLQWHG AP +P+WS+ SRFVAF+L+DSV
Sbjct:   641 AHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSV 700

Query:   706 KGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFL 765
             K EIYVAFN SHL  ++SLP RPGYRWEP VDTSKP P+D ++ DLP +E A+KQY  FL
Sbjct:   701 KKEIYVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFL 760

Query:   766 DAN 768
             DAN
Sbjct:   761 DAN 763
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0010021 "amylopectin biosynthetic process" evidence=IMP
GO:0010368 "chloroplast isoamylase complex" evidence=IDA
GO:0019156 "isoamylase activity" evidence=IDA;IMP
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4953 BA_4953 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04196ISOA1_ARATH3, ., 2, ., 1, ., 6, 80.76320.90730.9131yesno
Q6CZK1GLGX_ERWCT3, ., 2, ., 1, ., -0.35620.80070.9589yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.7LOW CONFIDENCE prediction!
3rd Layer3.2.1.680.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 0.0
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 0.0
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 0.0
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-164
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 1e-144
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 4e-79
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 7e-69
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 4e-59
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 1e-40
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 8e-40
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 1e-39
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 7e-36
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 6e-30
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 5e-29
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 5e-29
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 2e-28
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 5e-21
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 7e-20
cd11334447 cd11334, AmyAc_TreS, Alpha amylase catalytic domai 2e-18
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 3e-18
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 2e-16
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 1e-15
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 3e-15
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 4e-15
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 5e-15
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 2e-14
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 4e-13
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 2e-12
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 2e-12
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 3e-12
smart00642166 smart00642, Aamy, Alpha-amylase domain 6e-12
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 7e-12
cd11333428 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca 1e-11
cd11354357 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt 1e-11
cd11234101 cd11234, E_set_GDE_N, N-terminal Early set domain 2e-11
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 2e-11
PLN02960897 PLN02960, PLN02960, alpha-amylase 9e-11
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 1e-10
cd11332481 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti 3e-10
cd11328470 cd11328, AmyAc_maltase, Alpha amylase catalytic do 1e-09
PRK10933551 PRK10933, PRK10933, trehalose-6-phosphate hydrolas 1e-09
cd11331450 cd11331, AmyAc_OligoGlu_like, Alpha amylase cataly 2e-09
cd11330472 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d 4e-09
cd11348429 cd11348, AmyAc_2, Alpha amylase catalytic domain f 6e-09
cd11340407 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal 1e-08
cd0286097 cd02860, E_set_Pullulanase, Early set domain assoc 4e-08
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 5e-08
cd11324536 cd11324, AmyAc_Amylosucrase, Alpha amylase catalyt 9e-08
PRK09505683 PRK09505, malS, alpha-amylase; Reviewed 1e-07
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 4e-07
cd11359456 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic dom 7e-07
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 1e-06
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 2e-06
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 2e-06
PRK10785598 PRK10785, PRK10785, maltodextrin glucosidase; Prov 2e-06
TIGR01515618 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha 2e-06
cd11352443 cd11352, AmyAc_5, Alpha amylase catalytic domain f 2e-06
cd11345326 cd11345, AmyAc_SLC3A2, Alpha amylase catalytic dom 5e-06
PRK147051224 PRK14705, PRK14705, glycogen branching enzyme; Pro 2e-05
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 1e-04
cd11344355 cd11344, AmyAc_GlgE_like, Alpha amylase catalytic 4e-04
PRK14706639 PRK14706, PRK14706, glycogen branching enzyme; Pro 8e-04
cd11314302 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase 9e-04
cd11319375 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d 0.004
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information 
 Score =  705 bits (1823), Expect = 0.0
 Identities = 230/458 (50%), Positives = 288/458 (62%), Gaps = 44/458 (9%)

Query: 224 FDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVE--KLDHLKDLGINC 280
           FDWEGD   + P  D +IYE+HVRGFT+ H     E  GTY G+ E  K+ +LK+LG+  
Sbjct: 1   FDWEGDARPRIPWEDTVIYEMHVRGFTKLHPDVPEELRGTYAGLAEPAKIPYLKELGVTA 60

Query: 281 LELMPCHEFNELE---------YFSYNSVLG----DYNYSSAGIRNCGHDAINEFKLLVR 327
           +EL+P H F++ E         Y+ YN+ L     D  Y+S          ++EFK +V+
Sbjct: 61  VELLPVHAFDDEEHLVERGLTNYWGYNT-LNFFAPDPRYASDD---APGGPVDEFKAMVK 116

Query: 328 EAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKGEFY-NYSGCGNTFNC 386
             HK GIEV++DVV+NHT EG + GP LSFRG+DN+ YY L P G +Y NY+GCGNT N 
Sbjct: 117 ALHKAGIEVILDVVYNHTAEGGELGPTLSFRGLDNASYYRLDPDGPYYLNYTGCGNTLNT 176

Query: 387 NHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTP 446
           NHPVV + I+D LRYWVTEMHVDGFRFDLAS++ R                      G P
Sbjct: 177 NHPVVLRLILDSLRYWVTEMHVDGFRFDLASVLGRDPD-------------------GFP 217

Query: 447 LRSPPLIDLISNDPILRGVKLIAEAWDTGGL-YQVGIFPHWGIWSEWNGKYRDIVRQFIK 505
             +PPL++ I+ DP+L GVKLIAE WD GG  YQVG FP    W+EWN +YRD VR+F +
Sbjct: 218 DPNPPLLEAIAQDPVLSGVKLIAEPWDIGGGGYQVGNFPPG--WAEWNDRYRDDVRRFWR 275

Query: 506 GTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDN 565
           G  G  G FA  L GS +L+   GR P  S+NF+ AHDGF+LADLVSYN+KHN ANGE+N
Sbjct: 276 GDGGLVGDFATRLAGSSDLFGHDGRSPSASVNFITAHDGFTLADLVSYNEKHNEANGENN 335

Query: 566 NDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGN 625
            DG   N SWNCG EG   +  +  LRRRQMRN    L++SQG PM+  GDE+G T+ GN
Sbjct: 336 RDGHNDNLSWNCGVEGPTDDPEILALRRRQMRNLLATLLLSQGTPMLLAGDEFGRTQQGN 395

Query: 626 NNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHE 663
           NN YC DN+I++  WD  E   SD FRF   L   R  
Sbjct: 396 NNAYCQDNEISWLDWDLLEA-DSDLFRFVRRLIALRKA 432

Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 433
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins Back     alignment and domain information
>gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|199893 cd11234, E_set_GDE_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins Back     alignment and domain information
>gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins Back     alignment and domain information
>gnl|CDD|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|200470 cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase) Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200463 cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase Back     alignment and domain information
>gnl|CDD|236543 PRK09505, malS, alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|200494 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|236759 PRK10785, PRK10785, maltodextrin glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200483 cd11345, AmyAc_SLC3A2, Alpha amylase catalytic domain found in solute carrier family 3 member 2 proteins Back     alignment and domain information
>gnl|CDD|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200482 cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins Back     alignment and domain information
>gnl|CDD|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 788
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
PLN02960897 alpha-amylase 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN02361401 alpha-amylase 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
PLN02784894 alpha-amylase 100.0
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 99.97
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.95
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.89
smart00642166 Aamy Alpha-amylase domain. 99.84
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.8
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.76
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.74
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.66
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.53
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.46
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.31
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.25
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.24
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.2
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 98.91
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 98.74
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.71
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.67
PRK05402726 glycogen branching enzyme; Provisional 98.45
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.36
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.34
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.34
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.2
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.15
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 98.07
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 98.02
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.62
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.52
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 97.37
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 97.15
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 97.08
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 97.03
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 96.86
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 96.84
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 96.81
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 96.8
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 96.72
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 96.46
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 96.46
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.38
PRK14508497 4-alpha-glucanotransferase; Provisional 96.23
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 96.19
cd06600317 GH31_MGAM-like This family includes the following 96.04
PRK10426635 alpha-glucosidase; Provisional 95.99
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 95.87
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 95.78
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 95.71
PLN02635538 disproportionating enzyme 95.69
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 95.44
PRK10658665 putative alpha-glucosidase; Provisional 95.41
smart0063281 Aamy_C Aamy_C domain. 95.39
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 95.38
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 95.38
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 94.04
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 93.96
cd06595292 GH31_xylosidase_XylS-like This family represents a 93.48
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 93.24
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 92.45
PF05913357 DUF871: Bacterial protein of unknown function (DUF 92.06
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 91.8
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 91.77
TIGR00217513 malQ 4-alpha-glucanotransferase. This enzyme is kn 91.62
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 91.24
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 91.11
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 90.83
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 90.63
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 90.48
COG1640520 MalQ 4-alpha-glucanotransferase [Carbohydrate tran 90.37
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 90.0
KOG1065805 consensus Maltase glucoamylase and related hydrola 89.9
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 89.68
PLN03244872 alpha-amylase; Provisional 89.09
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 88.6
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 88.44
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 88.09
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 87.6
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 87.54
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 87.49
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 87.46
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 87.28
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 87.27
COG3589360 Uncharacterized conserved protein [Function unknow 86.72
PLN02950 909 4-alpha-glucanotransferase 86.23
PF02446496 Glyco_hydro_77: 4-alpha-glucanotransferase; InterP 85.63
PF0915457 DUF1939: Domain of unknown function (DUF1939); Int 85.49
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 85.24
PF14488166 DUF4434: Domain of unknown function (DUF4434) 84.56
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 84.11
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 84.1
cd06570311 GH20_chitobiase-like_1 A functionally uncharacteri 83.12
PF00728351 Glyco_hydro_20: Glycosyl hydrolase family 20, cata 81.08
PLN03059 840 beta-galactosidase; Provisional 80.58
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=2.4e-110  Score=975.67  Aligned_cols=642  Identities=43%  Similarity=0.767  Sum_probs=542.7

Q ss_pred             CCCCCCCcEEeCCcEEEEEEcCCCCEEEEEEEeCCCccCCceeeEEecccccCCCCCEEEEEEcCCCCCceeeEEEcCCc
Q 003901           93 GYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKF  172 (788)
Q Consensus        93 g~~~~lGa~~~~~~~~F~vwap~A~~V~L~l~~~~d~~~~~~~~~~~l~~~~~~~~gvW~~~i~~~~~~~~Y~y~~~g~~  172 (788)
                      |.|.||||++.+++|+|+||||+|++|+|+||+..+   ..+..+++|.   .+++|+|+++|+++.+|.+|+|+|+|.+
T Consensus         2 g~~~~LGa~~~~~g~~F~vwap~A~~V~L~l~~~~~---~~~~~~~~m~---~~~~gvW~~~v~~~~~g~~Y~yrv~g~~   75 (688)
T TIGR02100         2 GMPFPLGATWDGQGVNFALFSANAEKVELCLFDAQG---EKEEARLPLP---ERTDDIWHGYLPGAQPGQLYGYRVHGPY   75 (688)
T ss_pred             CCCcCCCeEEeCCcEEEEEECCCCCEEEEEEEcCCC---CceeeEEecc---cCCCCEEEEEECCCCCCCEEEEEEeeee
Confidence            788999999999999999999999999999997422   1233466774   4578999999999999999999999988


Q ss_pred             CCCCCcccCCcccccCcccceeeecccccC-------CCCC--------CCCCCcceecccCCCCCCCCCCC-CCCCCCC
Q 003901          173 SPQEGHYFDPTKIVLDPYAKAVISRAQFGV-------LGPD--------ENCWPQMACLVPTPEDEFDWEGD-LPLKYPQ  236 (788)
Q Consensus       173 ~~~~g~~~~~~~~~~DPya~~~~~~~~~~~-------~~~~--------~~~~~~~~~~~~~~~~~~~W~~~-~~~~~~~  236 (788)
                      .|..|.+|++.++++||||+++..+..++.       ..+.        ........++|.+  ..|+|+++ .++..+|
T Consensus        76 ~~~~g~~f~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d--~~~~w~~~~~~p~~~~  153 (688)
T TIGR02100        76 DPENGHRFNPNKLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVD--PDFDWGGDEQRPRTPW  153 (688)
T ss_pred             CCCCCcccCcCceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeC--CCCCCCCcccCCCCCc
Confidence            889999999999999999999976643211       0000        0001112455554  36999977 5556689


Q ss_pred             CCeEEEEEeccCcccCCCC-CCCCCcCHHHHHhh--hHHHHHcCCCeEEECcccccCccCcccCCCCCCCcccCCCCC--
Q 003901          237 RDLIIYEVHVRGFTRHESS-KTEHPGTYLGVVEK--LDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDYNYSSAGI--  311 (788)
Q Consensus       237 ~~~viYei~v~~Ft~~~~s-~~~~~G~~~gl~~~--L~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~~wgY~~~~~--  311 (788)
                      +++||||+||++|+..+++ ....+|||+||+++  |+|||+||||+||||||+++.........+..+||||++.+|  
T Consensus       154 ~d~iIYE~hvr~Ft~~~~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a  233 (688)
T TIGR02100       154 EDTIIYEAHVKGFTQLHPDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFA  233 (688)
T ss_pred             cccEEEEEEhHHhcCCCCCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccc
Confidence            9999999999999985433 34578999999996  999999999999999999986543222223457799999998  


Q ss_pred             CCCCC---CcHHHHHHHHHHHHHcCCEEEEEeeeccccCCCCCCCccccCCCCCccceeeCCC--CCcccCCCCccccCC
Q 003901          312 RNCGH---DAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPK--GEFYNYSGCGNTFNC  386 (788)
Q Consensus       312 ~~~~~---G~~~elk~lV~~aH~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~--g~~~~~~g~~~dln~  386 (788)
                      ++++|   |+++|||+||++||++||+||||||+|||+.++..++...+++.++.+||+..++  +.+.++++|++++|+
T Consensus       234 ~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~~~~~g~gn~ln~  313 (688)
T TIGR02100       234 PEPRYLASGQVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYYINDTGTGNTLNL  313 (688)
T ss_pred             cChhhcCCCCHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCceecCCCCccccccC
Confidence            88899   6899999999999999999999999999999887777778888888899988765  778899999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHhcCccEEEEecccccccCCCccccccccCccccCCccccCCCCCChHHHHHHHcCCccccce
Q 003901          387 NHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVK  466 (788)
Q Consensus       387 ~~p~vr~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~~w~~~~~~g~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~  466 (788)
                      ++|+||++|+++++||+++|||||||||+|..|.+...-+.                    ...+++++++.++++++++
T Consensus       314 ~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~~~--------------------~~~~~~~~i~~d~~~~~~~  373 (688)
T TIGR02100       314 SHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYGFD--------------------MLSGFFTAIRQDPVLAQVK  373 (688)
T ss_pred             CCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCCCc--------------------ccHHHHHHHHhCcccCCeE
Confidence            99999999999999999999999999999999975321000                    0235788899899999999


Q ss_pred             eeeeeccCC-CcccccccCCCCcccccchhHHHHHHHHHhCCCCcHHHHHHHHhCCCCccCCCCCCCCcceeecccCCCc
Q 003901          467 LIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGF  545 (788)
Q Consensus       467 ligE~w~~~-~~~~~~~~~~~~~~~~~n~~f~~~lr~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~p~~~vnfv~nHD~~  545 (788)
                      ||||.|+.+ +.++.+.|+.  .+++||+.|++.+|.|++|+.+....|+..|+++..+|......|.++||||++||++
T Consensus       374 ligE~W~~~~~~~~~~~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~iNyv~~HD~~  451 (688)
T TIGR02100       374 LIAEPWDIGPGGYQVGNFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPWASINFVTAHDGF  451 (688)
T ss_pred             EEEeeecCCCCcccccCCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcCEEEEEEeCCCCc
Confidence            999999976 5666676653  5799999999999999999998999999999999888876556789999999999999


Q ss_pred             chhhhhhhcccccccCCCCCCCCCCCCCCCCcCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCceEEecccccccCCCCC
Q 003901          546 SLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGN  625 (788)
Q Consensus       546 rl~d~~~~~~~~n~~~g~~~~dg~~~~~sw~~g~~~~~~~~~~~~~~~~~~r~a~alllt~pGiP~Iy~GdE~G~~~~g~  625 (788)
                      ||+|+++++.|||+++|++|+||.++|+|||||.||++....+.++|.+++|+++++|||+|||||||||||+|++|.|+
T Consensus       452 tl~D~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~~GdE~g~t~~G~  531 (688)
T TIGR02100       452 TLRDLVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLLAGDEFGRTQQGN  531 (688)
T ss_pred             hHHHHHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceeeecHhhccCCCCC
Confidence            99999999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCccccccCcccCcchHHHHHHHHHHHHHhhCccCCCCCCCCc-------cceee---ccCCCCCCCCCC-CC
Q 003901          626 NNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA-------DRLQW---HGHAPGLPDWSD-KS  694 (788)
Q Consensus       626 ~n~y~~~~~~~~~~W~~~~~~~~~l~~~~r~Li~lRk~~~aL~~g~~~~~-------~~~~~---~~~~~~~~~~~~-~~  694 (788)
                      +|+||+++.+++|+|+..+.+ .++++|+|.||+|||+||+|+.+++...       ..|+|   +|..+..++|.. ..
T Consensus       532 ~n~y~~~~~~~~~dW~~~~~~-~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~~~~~~~w~~~~~  610 (688)
T TIGR02100       532 NNAYCQDNEIGWVDWSLDEGD-DELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGEPMTEEDWENPET  610 (688)
T ss_pred             CCCccCCCcccccCccccccc-HHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCCcCChhhcCCCCC
Confidence            999999999999999987766 8999999999999999999999987643       46899   788888888976 47


Q ss_pred             cEEEEEEEcCC-------CCEEEEEEeCCCCcEEEECCCCCCCCeEEEecCCCCCCCCccCCCCchhhhhhhhcCCCCCC
Q 003901          695 RFVAFTLIDSV-------KGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDA  767 (788)
Q Consensus       695 ~vlaf~r~~~~-------~~~i~Vv~N~~~~~~~v~Lp~~~g~~w~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  767 (788)
                      ++++|.+....       .+.++|++|.+.+.+++.||..+ ..|.+++|+....+....  .              ...
T Consensus       611 ~~l~~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~-~~w~~~~dt~~~~~~~~~--~--------------~~~  673 (688)
T TIGR02100       611 RLLCMVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGG-GRWELVLDTADEEAPGIH--L--------------DAG  673 (688)
T ss_pred             CEEEEEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCC-CcEEEEecCCCCCCcccc--c--------------cCC
Confidence            99999987532       14699999999999999999743 589999999653322110  0              124


Q ss_pred             eeEEeeCCeEEEEEe
Q 003901          768 NLYPMLSYSSIILLL  782 (788)
Q Consensus       768 ~~~~v~~~s~~vl~~  782 (788)
                      ..+.|+|+|++||+.
T Consensus       674 ~~~~v~~~s~~vl~~  688 (688)
T TIGR02100       674 QEAELPARSVLLLRR  688 (688)
T ss_pred             CEEEEcCCEEEEEeC
Confidence            679999999999973

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>TIGR00217 malQ 4-alpha-glucanotransferase Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3589 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN02950 4-alpha-glucanotransferase Back     alignment and domain information
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09154 DUF1939: Domain of unknown function (DUF1939); InterPro: IPR015237 This entry represents a C-terminal domain associated with prokaryotic alpha-amylases Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 1e-123
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 1e-105
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 1e-70
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 1e-40
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 4e-31
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 4e-27
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 4e-27
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 5e-27
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 2e-24
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 3e-20
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 3e-20
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 3e-20
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 1e-19
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-19
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 3e-16
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 1e-13
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 2e-12
2wc7_A488 Crystal Structure Of Nostoc Punctiforme Debranching 4e-12
1wza_A488 Crystal Structure Of Alpha-Amylase From H.Orenii Le 6e-12
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 3e-11
1gvi_A588 Thermus Maltogenic Amylase In Complex With Beta-Cd 3e-11
1ea9_C583 Cyclomaltodextrinase Length = 583 4e-11
1wzk_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 6e-11
1jf5_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 9e-11
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 1e-10
1g1y_A585 Crystal Structure Of Alpha-Amylase Ii (Tvaii) From 2e-10
1bvz_A585 Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vul 2e-10
1jf6_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 2e-10
4gkl_A422 Crystal Structure Of A Noncanonic Maltogenic Alpha- 2e-10
1wzm_A585 Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (t 2e-10
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 4e-10
1wzl_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 4e-10
1j0j_A588 Crystal Structure Of Neopullulanase E357q Complex W 6e-10
1j0h_A588 Crystal Structure Of Bacillus Stearothermophilus Ne 7e-10
1jl8_A585 Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoact 7e-10
1uok_A558 Crystal Structure Of B. Cereus Oligo-1,6-Glucosidas 2e-09
1m53_A570 Crystal Structure Of Isomaltulose Synthase (Pali) F 2e-09
2z1k_A475 Crystal Structure Of Ttha1563 From Thermus Thermoph 4e-09
1vfm_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 4e-09
3gbd_A558 Crystal Structure Of The Isomaltulose Synthase Smua 2e-08
4aef_A645 The Crystal Structure Of Thermostable Amylase From 3e-08
2fgz_A926 Crystal Structure Analysis Of Apo Pullulanase From 4e-08
2fh8_A922 Crystal Structure Analysis Of Klebsiella Pneumoniae 4e-08
2fh6_A920 Crystal Structure Analysis Of Klebsiella Pneumoniae 4e-08
2fhb_A1083 Crystal Structure Analysis Of Klebsiella Pneumoniae 4e-08
3k1d_A722 Crystal Structure Of Glycogen Branching Enzyme Syno 9e-08
4gi6_A557 Crystal Structure Of The Mutb F164l Mutant In Compl 4e-07
2pwg_A556 Crystal Structure Of The Trehalulose Synthase Mutb 4e-07
2pwe_A556 Crystal Structure Of The Mutb E254q Mutant In Compl 4e-07
4h2c_A557 Trehalulose Synthase Mutb R284c Mutant Length = 557 4e-07
1zja_A557 Crystal Structure Of The Trehalulose Synthase Mutb 4e-07
2ze0_A555 Alpha-glucosidase Gsj Length = 555 5e-07
4gin_A584 Crystal Structure Of The Mutb R284c Mutant From Cry 5e-07
4aee_A696 Crystal Structure Of Maltogenic Amylase From S.Mari 3e-06
2pwf_A556 Crystal Structure Of The Mutb D200a Mutant In Compl 3e-06
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 3e-06
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 4e-06
3k8l_A669 Crystal Structure Of Susg-D498n Mutant With Maltohe 6e-06
1m7x_A617 The X-Ray Crystallographic Structure Of Branching E 7e-06
1lwh_A441 Crystal Structure Of T. Maritima 4-Alpha-Glucanotra 8e-06
3k8k_A669 Crystal Structure Of Susg Length = 669 8e-06
4aie_A549 Structure Of Glucan-1,6-Alpha-Glucosidase From Lact 1e-05
1cyg_A680 Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgt 2e-05
3ucq_A655 Crystal Structure Of Amylosucrase From Deinococcus 4e-05
2zic_A543 Crystal Structure Of Streptococcus Mutans Dextran G 4e-05
2zid_A543 Crystal Structure Of Dextran Glucosidase E236q Comp 4e-05
4cgt_A678 Deletion Mutant Delta(145-150), F151d Of Cyclodextr 5e-04
1qho_A 686 Five-Domain Alpha-Amylase From Bacillus Stearotherm 7e-04
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  440 bits (1131), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 285/718 (39%), Positives = 381/718 (53%), Gaps = 107/718 (14%)
Query: 93  GYPTPFGATL--RDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDV 150
           G P P G+     D GVNFS+FS NA    L L +L++ +  K   E+      NKTGD+
Sbjct: 15  GDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVK-----NKTGDI 69
Query: 151 WHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV-----ISRAQFGVLGP 205
           WHVF+ G     LY Y+  G + P+ G  F+P K+++DPYAKA+      + A FG    
Sbjct: 70  WHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIG 129
Query: 206 DEN------------CWPQMACLVPTPEDEFDWEGDLPLK---YPQRDLIIYEVHVRGFT 250
           D+N              P+   + P     F+W+ +  +K    P +D +IYEVHV+GFT
Sbjct: 130 DQNQDLTYDERDSGEYVPKSVVINPY----FEWDDEDFIKGKKVPLKDTVIYEVHVKGFT 185
Query: 251 RHESSKTEH-PGTYLGVV--EKLDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDY--- 304
           +      E+  GTY G+   + + +LKDLGI  +ELMP   F +  + + +  L +Y   
Sbjct: 186 KLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLT-DKGLTNYWGY 244
Query: 305 ----------NYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPI 354
                      YSS G   C    +  FK +V E H  GIEV++DVV+NHT EGN  GP 
Sbjct: 245 DPINFFSPECRYSSTG---CLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPT 301
Query: 355 LSFRGVDNSVYYMLAPKGEFY--NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFR 412
           LSFRG+DN+ YYML P  + Y  +++G GNT N +HP V Q ++D LRYWVTEMHVDGFR
Sbjct: 302 LSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFR 361
Query: 413 FDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAW 472
           FDLA+ + R     + +N + I ++                     DPIL  VKLIAE W
Sbjct: 362 FDLAAALARELYSVNMLNTFFIALQ--------------------QDPILSQVKLIAEPW 401
Query: 473 DTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRK 531
           D G G YQVG FP+   W+EWNGKYRD +R+F +G        A  L GSP++Y G  + 
Sbjct: 402 DVGQGGYQVGNFPYQ--WAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKT 459
Query: 532 PWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKL 591
           P+ SIN+V +HDGF+L DLVSYNQKHN ANG +N DG   N SWNCG EG   +  V   
Sbjct: 460 PFASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVIC 519
Query: 592 RRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFF 651
           R +Q RNF + L+VSQG PMI  GDE   T+ GNNN +C DN+I +F W+  +E KS F 
Sbjct: 520 REKQKRNFMITLLVSQGTPMILGGDELSRTQRGNNNAFCQDNEITWFDWN-LDERKSKFL 578
Query: 652 RFCCLLTK-------FRHECESLG--LSDFPTADRLQW--HGHAPGLPDWSDKSRFVAFT 700
            F   + +       FR E    G  L   P  D   +   G       WS  ++ V F 
Sbjct: 579 EFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSSPTQLVIFV 638
Query: 701 LIDSVKGEI------------YVAFNASHLPVIISLPKRPGYRWEPLVDTS----KPE 742
           L  SV  EI             +  NA+   V +  PK    +WE ++ +     KPE
Sbjct: 639 LEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKG---KWELVISSYLREIKPE 693
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|2WC7|A Chain A, Crystal Structure Of Nostoc Punctiforme Debranching Enzyme( Npde)(Acarbose Soaked) Length = 488 Back     alignment and structure
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|1WZK|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt D465n Length = 585 Back     alignment and structure
>pdb|1JF5|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2 Mutant F286a Length = 585 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|1G1Y|A Chain A, Crystal Structure Of Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R-47 And Beta-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|1BVZ|A Chain A, Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R- 47 Length = 585 Back     alignment and structure
>pdb|1JF6|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase Mutant F286y Length = 585 Back     alignment and structure
>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 Back     alignment and structure
>pdb|1WZM|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (tva Ii) Mutatnt R469k Length = 585 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|1WZL|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt R469l Length = 585 Back     alignment and structure
>pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With Maltotetraose Length = 588 Back     alignment and structure
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 Back     alignment and structure
>pdb|1JL8|A Chain A, Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoactinomyces Vulgaris R-47 With Beta-Cyclodextrin Based On A Co- Crystallization With Methyl Beta-Cyclodextrin Length = 585 Back     alignment and structure
>pdb|1UOK|A Chain A, Crystal Structure Of B. Cereus Oligo-1,6-Glucosidase Length = 558 Back     alignment and structure
>pdb|1M53|A Chain A, Crystal Structure Of Isomaltulose Synthase (Pali) From Klebsiella Sp. Lx3 Length = 570 Back     alignment and structure
>pdb|2Z1K|A Chain A, Crystal Structure Of Ttha1563 From Thermus Thermophilus Hb8 Length = 475 Back     alignment and structure
>pdb|1VFM|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2ALPHA-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|3GBD|A Chain A, Crystal Structure Of The Isomaltulose Synthase Smua From Protaminobacter Rubrum Length = 558 Back     alignment and structure
>pdb|4AEF|A Chain A, The Crystal Structure Of Thermostable Amylase From The Pyrococcus Length = 645 Back     alignment and structure
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae Pullulanase Complexed With Maltose Length = 1083 Back     alignment and structure
>pdb|3K1D|A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H37rv Length = 722 Back     alignment and structure
>pdb|4GI6|A Chain A, Crystal Structure Of The Mutb F164l Mutant In Complex With Glucose Length = 557 Back     alignment and structure
>pdb|2PWG|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 Complexed To The Inhibitor Castanospermine Length = 556 Back     alignment and structure
>pdb|2PWE|A Chain A, Crystal Structure Of The Mutb E254q Mutant In Complex With The Substrate Sucrose Length = 556 Back     alignment and structure
>pdb|4H2C|A Chain A, Trehalulose Synthase Mutb R284c Mutant Length = 557 Back     alignment and structure
>pdb|1ZJA|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 (Triclinic Form) Length = 557 Back     alignment and structure
>pdb|2ZE0|A Chain A, Alpha-glucosidase Gsj Length = 555 Back     alignment and structure
>pdb|4GIN|A Chain A, Crystal Structure Of The Mutb R284c Mutant From Crystals Soaked With The Inhibitor Deoxynojirimycin Length = 584 Back     alignment and structure
>pdb|4AEE|A Chain A, Crystal Structure Of Maltogenic Amylase From S.Marinus Length = 696 Back     alignment and structure
>pdb|2PWF|A Chain A, Crystal Structure Of The Mutb D200a Mutant In Complex With Glucose Length = 556 Back     alignment and structure
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|3K8L|A Chain A, Crystal Structure Of Susg-D498n Mutant With Maltoheptaose Length = 669 Back     alignment and structure
>pdb|1M7X|A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme Length = 617 Back     alignment and structure
>pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 Back     alignment and structure
>pdb|3K8K|A Chain A, Crystal Structure Of Susg Length = 669 Back     alignment and structure
>pdb|4AIE|A Chain A, Structure Of Glucan-1,6-Alpha-Glucosidase From Lactobacillus Acidophilus Ncfm Length = 549 Back     alignment and structure
>pdb|1CYG|A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase) Length = 680 Back     alignment and structure
>pdb|3UCQ|A Chain A, Crystal Structure Of Amylosucrase From Deinococcus Geothermalis Length = 655 Back     alignment and structure
>pdb|2ZIC|A Chain A, Crystal Structure Of Streptococcus Mutans Dextran Glucosidase Length = 543 Back     alignment and structure
>pdb|2ZID|A Chain A, Crystal Structure Of Dextran Glucosidase E236q Complex With Isomaltotriose Length = 543 Back     alignment and structure
>pdb|4CGT|A Chain A, Deletion Mutant Delta(145-150), F151d Of Cyclodextrin Glycosyltransferase Length = 678 Back     alignment and structure
>pdb|1QHO|A Chain A, Five-Domain Alpha-Amylase From Bacillus Stearothermophilus, MaltoseACARBOSE COMPLEX Length = 686 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 0.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 0.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 0.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 0.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 0.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 0.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 0.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 0.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 0.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-150
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 7e-32
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 1e-30
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 1e-30
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 2e-28
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 3e-25
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 7e-24
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 7e-23
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 3e-04
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 7e-23
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 1e-04
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 1e-22
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 2e-21
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 4e-21
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-20
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-04
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 5e-20
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 8e-20
1d3c_A686 Cyclodextrin glycosyltransferase; alpha-amylase, p 5e-19
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 5e-19
3bmv_A683 Cyclomaltodextrin glucanotransferase; glycosidase, 2e-18
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 2e-18
1qho_A686 Alpha-amylase; glycoside hydrolase, starch degrada 2e-18
1cyg_A680 Cyclodextrin glucanotransferase; glycosyltransfera 4e-18
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 7e-18
3aml_A755 OS06G0726400 protein; starch-branching, transferas 1e-17
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 2e-17
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 1e-16
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 2e-16
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 8e-16
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 3e-15
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 3e-15
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 1e-14
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 1e-14
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 1e-14
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 6e-14
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 1e-06
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 6e-14
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 1e-13
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 6e-13
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 1e-12
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 2e-12
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 3e-12
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 9e-05
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 5e-12
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 2e-04
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 3e-11
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 4e-11
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 5e-11
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 6e-11
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 6e-11
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 2e-10
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 4e-10
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 1e-09
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 5e-09
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 2e-08
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 2e-08
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 8e-08
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 9e-08
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
 Score =  868 bits (2244), Expect = 0.0
 Identities = 229/685 (33%), Positives = 330/685 (48%), Gaps = 79/685 (11%)

Query: 89  QVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTG 148
           Q++ G P P GA     GVNF++FS++A    LC+        N       L      +G
Sbjct: 3   QLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFD-----ANGQEHRYDLP---GHSG 54

Query: 149 DVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVI-----SRAQFGVL 203
           D+WH +L      + YGY+  G + P EGH F+P K+++DP A+ +      +       
Sbjct: 55  DIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHA-- 112

Query: 204 GPDENCWPQMACLVPT---PEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEH 259
           G +E  +   A + P      D +DWE D P + P    IIYE HV+G T  H     E 
Sbjct: 113 GHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEI 172

Query: 260 PGTYLGVVEK--LDHLKDLGINCLELMPCHEFNELE---------YFSYNSVLG----DY 304
            GTY  +     +++LK LGI  LEL+P  +F             Y+ YN  +       
Sbjct: 173 RGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNP-VAMFALHP 231

Query: 305 NYSSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSV 364
            Y+ +        A++EF+  ++  HK GIEV++D+V NH+ E +  GP+ S RG+DN  
Sbjct: 232 AYACSP-----ETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRS 286

Query: 365 YYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSS 424
           YY +   G+++N++GCGNT N +HP V  +   CLRYWV   HVDGFRFDLA++M R   
Sbjct: 287 YYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTP- 345

Query: 425 LWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIF 483
                       E          +  PL   I N P+L  VKLIAE WD   G YQVG F
Sbjct: 346 ------------EFR--------QDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNF 385

Query: 484 PHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHD 543
           P    ++EWN  +RD  R+F    D   GAFA     S ++++  GR P  +IN V AHD
Sbjct: 386 PPL--FAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHD 443

Query: 544 GFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCL 603
           GF+L D V +N KHN ANGE+N DG  +N S N G+EG   ++ + + RR  +      L
Sbjct: 444 GFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTL 503

Query: 604 MVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHE 663
           ++SQG PM+  GDE+GH++ GNNN YC DN + +  W +          F   L   R  
Sbjct: 504 LLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASS---GLTAFTAALIHLRKR 560

Query: 664 CESLGLSDFPTADR-----LQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHL 718
             +L  + +          L  +       +W +  + +   L D       +A NA+  
Sbjct: 561 IPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDR----FLIAINATLE 616

Query: 719 PVIISLPKRPGYRWEPLVDTSKPEP 743
              I LP      W  +   +  + 
Sbjct: 617 VTEIVLPAGE---WHAIPPFAGEDN 638
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Length = 543 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Length = 558 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Length = 589 Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Length = 570 Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Length = 557 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Length = 555 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Length = 720 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query788
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 100.0
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.96
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.91
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.85
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.8
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.74
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.69
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.3
1z0n_A96 5'-AMP-activated protein kinase, beta-1 subunit; b 98.41
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 98.17
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 97.98
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.69
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 97.44
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 96.55
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 96.52
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 96.45
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 96.44
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 96.15
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 95.88
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 95.88
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 95.74
1x1n_A524 4-alpha-glucanotransferase; disproportionating enz 95.65
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 95.61
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 95.45
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 94.97
1esw_A500 Amylomaltase; (beta,alpha)8-barrel, glucanotransfe 94.96
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 94.78
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 93.31
1x7f_A385 Outer surface protein; structural genomics, unknow 93.28
2xvl_A1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 93.09
2qlv_B252 Protein SIP2, protein SPM2; heterotrimer, ATP-bind 93.06
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 92.91
2p0o_A372 Hypothetical protein DUF871; structural genomics, 92.9
1tz7_A505 4-alpha-glucanotransferase; (beta, alpha)8- barrel 92.39
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 92.09
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 92.06
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 90.15
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 90.11
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 88.6
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 88.47
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 88.44
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 88.42
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 88.24
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 88.13
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 87.72
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 87.27
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 87.13
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 87.08
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 86.21
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 86.19
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 86.04
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 85.65
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 85.65
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 85.34
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 85.23
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 84.96
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 83.68
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 83.57
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 83.5
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 83.49
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 83.46
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 83.44
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 83.25
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 83.22
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 83.05
2ki0_A36 DS119; beta-alpha-beta, de novo protein; NMR {Synt 83.02
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 83.0
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 82.73
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 82.66
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 82.34
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 82.34
3top_A908 Maltase-glucoamylase, intestinal; membrane, hydrol 82.22
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 82.09
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 81.47
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 81.01
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 80.86
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 80.71
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
Probab=100.00  E-value=1.6e-100  Score=910.88  Aligned_cols=647  Identities=40%  Similarity=0.723  Sum_probs=538.6

Q ss_pred             ceecCCCCCCCCcEE--eCCcEEEEEEcCCCCEEEEEEEeCCCccCCceeeEEecccccCCCCCEEEEEEcCCCCCceee
Q 003901           88 FQVSKGYPTPFGATL--RDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYG  165 (788)
Q Consensus        88 ~~~~~g~~~~lGa~~--~~~~~~F~vwap~A~~V~L~l~~~~d~~~~~~~~~~~l~~~~~~~~gvW~~~i~~~~~~~~Y~  165 (788)
                      ..+..|.|.||||++  .++||+|+||||+|++|+|+||...+  ...+...++|.+   .++|+|+++||+..+|.+|+
T Consensus        10 ~~~~~g~~~~lGa~~~~~~~g~~F~vwap~A~~V~l~lf~~~~--~~~~~~~~~m~~---~~~gvw~~~v~~~~~g~~Y~   84 (718)
T 2vr5_A           10 RPLRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTN--QKYPKEIIEVKN---KTGDIWHVFVPGLRPGQLYA   84 (718)
T ss_dssp             SCCBCCCSCSSEEEEEGGGTEEEEEEECSSCSEEEEEECCSSC--CSSCSEEEEECE---ESSSEEEEEEETCCTTCEEE
T ss_pred             ccccCCCCCCCcceEeeCCCeEEEEEECCCCCEEEEEEEcCCC--CCCcceEEeCcc---CCCCEEEEEeCCCCCCCEEE
Confidence            567889999999999  78899999999999999999986421  112335788854   46799999999999999999


Q ss_pred             EEEcCCcCCCCCcccCCcccccCcccceeeecccccC------CC-CC--------CCCCCcceecccCCCCCCCCCCC-
Q 003901          166 YKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGV------LG-PD--------ENCWPQMACLVPTPEDEFDWEGD-  229 (788)
Q Consensus       166 y~~~g~~~~~~g~~~~~~~~~~DPya~~~~~~~~~~~------~~-~~--------~~~~~~~~~~~~~~~~~~~W~~~-  229 (788)
                      |+|+|.+.|..|.++++.++++||||+++..+..|+.      .+ |.        +.......++|.+  ..|+|+++ 
T Consensus        85 y~v~g~~~p~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d--~~~~W~~~~  162 (718)
T 2vr5_A           85 YRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVIN--PYFEWDDED  162 (718)
T ss_dssp             EEEECCEETTTTEECCTTSCBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCC--CCCCCTTGG
T ss_pred             EEEeeecCcccCcccCCCceEcCcCccccccCccccccccccccCCcccccccccccccccccceEEec--CCcCCCccc
Confidence            9999988889999999888999999999976544321      01 11        0011112566654  25999988 


Q ss_pred             --CCCCCCCCCeEEEEEeccCcccCC-CCCCCCCcCHHHHHhh--hHHHHHcCCCeEEECcccccCccCcccCCCCCCCc
Q 003901          230 --LPLKYPQRDLIIYEVHVRGFTRHE-SSKTEHPGTYLGVVEK--LDHLKDLGINCLELMPCHEFNELEYFSYNSVLGDY  304 (788)
Q Consensus       230 --~~~~~~~~~~viYei~v~~Ft~~~-~s~~~~~G~~~gl~~~--L~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~~w  304 (788)
                        .++..+|+++|||||||++|++.+ +++..++|||+||+++  |+|||+||||+||||||+++.........+..+||
T Consensus       163 ~~~~~~~~~~~~vIYeihv~~f~~~~~~~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~w  242 (718)
T 2vr5_A          163 FIKGKKVPLKDTVIYEVHVKGFTKLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYW  242 (718)
T ss_dssp             GGSSSCCCTTSCCEEEECTTTTTTTCTTSCTTSTTSHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSS
T ss_pred             cccCCCCChhHCEEEEEEcchhhcCCCCCCcccCcCHHHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCcc
Confidence              677778999999999999999844 3455679999999999  99999999999999999998754322222345789


Q ss_pred             ccCCCCC--CCCCCCc-------HHHHHHHHHHHHHcCCEEEEEeeeccccCCCCCCCccccCCCCCccceeeCCCC--C
Q 003901          305 NYSSAGI--RNCGHDA-------INEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILSFRGVDNSVYYMLAPKG--E  373 (788)
Q Consensus       305 gY~~~~~--~~~~~G~-------~~elk~lV~~aH~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~g--~  373 (788)
                      ||++.+|  ++++||+       ++|||+||++||++||+||||||+||++.++.+++..++++.++..||++.+++  .
T Consensus       243 GY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~  322 (718)
T 2vr5_A          243 GYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRY  322 (718)
T ss_dssp             CCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSS
T ss_pred             CcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCCCce
Confidence            9999998  8999999       899999999999999999999999999999988777777777888899887654  5


Q ss_pred             cccCCCCccccCCCCHHHHHHHHHHHHHHHHhcCccEEEEecccccccCCCccccccccCccccCCccccCCCCCChHHH
Q 003901          374 FYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLI  453 (788)
Q Consensus       374 ~~~~~g~~~dln~~~p~vr~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~~w~~~~~~g~~~~~~~~~~g~~~~~~~~~  453 (788)
                      |.++++|+++||+++|+||++|+++++||+++|||||||||+|+++.++  +|.-                  ....+++
T Consensus       323 ~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~--~~~~------------------~~~~~~~  382 (718)
T 2vr5_A          323 YLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARE--LYSV------------------NMLNTFF  382 (718)
T ss_dssp             BCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBS--SSSB------------------CTTCHHH
T ss_pred             eecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchhhhhhc--cCCc------------------cchHHHH
Confidence            6789999999999999999999999999998899999999999999763  3321                  0113478


Q ss_pred             HHHHcCCccccceeeeeeccCC-CcccccccCCCCcccccchhHHHHHHHHHhCCCCcHHHHHHHHhCCCCccCCCCCCC
Q 003901          454 DLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKP  532 (788)
Q Consensus       454 ~~i~~~~~~~~~~ligE~w~~~-~~~~~~~~~~~~~~~~~n~~f~~~lr~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~p  532 (788)
                      +.++.++..+++++|||.|+.+ +.++.+.|+.  .+++||+.|++.++.|++|+.+....++..+.++...|...+..|
T Consensus       383 ~~i~~~~~~~~~~liaE~w~~~~~~~~~~~f~~--~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~~~~~~p  460 (718)
T 2vr5_A          383 IALQQDPILSQVKLIAEPWDVGQGGYQVGNFPY--QWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTP  460 (718)
T ss_dssp             HHHHHCTTGGGSEEEECCBCSSTTCBCTTCSCT--TEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHGGGTCCG
T ss_pred             HHHHhCcccCCcEEEecccccCCCcccccCCch--hHHHHhHHHHHHHHHHHcCCcchHHHHHHHHhcchhhhcccCCCc
Confidence            8888888889999999999865 4466666652  568999999999999999988888899999988766665444567


Q ss_pred             CcceeecccCCCcchhhhhhhcccccccCCCCCCCCCCCCCCCCcCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 003901          533 WNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMI  612 (788)
Q Consensus       533 ~~~vnfv~nHD~~rl~d~~~~~~~~n~~~g~~~~dg~~~~~sw~~g~~~~~~~~~~~~~~~~~~r~a~alllt~pGiP~I  612 (788)
                      ..++||++|||+.|+.+++++..+||.++|+.++||...|.+|+||.++.+..+.+...+.+++|++++++|++||+|||
T Consensus       461 ~~~vnf~~~HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~~G~P~i  540 (718)
T 2vr5_A          461 FASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMI  540 (718)
T ss_dssp             GGEEECSCCSSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred             ceeeeeeecCCCCCHHHHHHHhhhhhhhcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence            88999999999999999999999999999999999999999999999998877777777788999999999999999999


Q ss_pred             ecccccccCCCCCCCCcCCCCCccccccCcccCcchHHHHHHHHHHHHHhhCccCCCCCCCCc--------cceee---c
Q 003901          613 SMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA--------DRLQW---H  681 (788)
Q Consensus       613 y~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~r~Li~lRk~~~aL~~g~~~~~--------~~~~~---~  681 (788)
                      |||||+|+++.|++|+||+++.+++++|+..+.. .++++|+|+||+|||++|+|+.+++...        .++.|   +
T Consensus       541 y~GdE~G~~~~G~~~~y~~~~~~~~~~W~~~~~~-~~l~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~~~~~~~~~  619 (718)
T 2vr5_A          541 LGGDELSRTQRGNNNAFCQDNEITWFDWNLDERK-SKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLE  619 (718)
T ss_dssp             ETTTTTTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHHHCGGGSCSSCCCSSBCTTCSSBSEEEECSS
T ss_pred             EechhhcccCCCCCCcccCCccccccCccccccc-hHHHHHHHHHHHHHhhCcccccCcccccccccccCCCceEEECCC
Confidence            9999999999999999999999999999986655 8999999999999999999999987542        36788   6


Q ss_pred             cCCCCCCCCCCCCcEEEEEEEcC-------C-----CCEEEEEEeCCCCcEEEECCCCC-CCCeEEEecCCCCCCCCccC
Q 003901          682 GHAPGLPDWSDKSRFVAFTLIDS-------V-----KGEIYVAFNASHLPVIISLPKRP-GYRWEPLVDTSKPEPFDFLS  748 (788)
Q Consensus       682 ~~~~~~~~~~~~~~vlaf~r~~~-------~-----~~~i~Vv~N~~~~~~~v~Lp~~~-g~~w~~l~d~~~~~~~~~~~  748 (788)
                      |..++.++|....++++|.|...       .     .+.++|++|++.+++++.||..+ |..|++++++.....     
T Consensus       620 g~~~~~~~~~~~~~~la~~r~~~~~~~~~~~~~~~~~~~ilv~~N~~~~~~~~~lp~~~~g~~w~~l~~t~~~~~-----  694 (718)
T 2vr5_A          620 GREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKPEE-----  694 (718)
T ss_dssp             SCBCCTTTTTSEESEEEEEEEGGGCCCBCTTSCBCCCCEEEEEEECCSSCEEEECCSSEEEEEEESCCSCCCTTS-----
T ss_pred             CCcCCccccCCCCCEEEEEEeCCccccccccccccCCCeEEEEECCCCCcEEEECCCCCCCCeEEEEecCCCCcc-----
Confidence            76777777776689999999852       1     36899999999999999999753 557999998754221     


Q ss_pred             CCCchhhhhhhhcCCCCCCeeEEeeCCeEEEEEe
Q 003901          749 SDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL  782 (788)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~vl~~  782 (788)
                      ..             ......++|+|+|++||+.
T Consensus       695 ~~-------------~~~~~~~~l~~~s~~vl~~  715 (718)
T 2vr5_A          695 RI-------------IEGEKELEIEGRTALVYRR  715 (718)
T ss_dssp             SC-------------CCTTCEEEECSSEEEEEEE
T ss_pred             cc-------------ccCCCeEEECCcEEEEEEe
Confidence            00             0234679999999999987
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1 Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic} Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 788
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 4e-98
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 7e-63
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 2e-49
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 5e-49
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 4e-18
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 9e-38
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 1e-36
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 3e-36
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 2e-34
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 7e-34
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 1e-32
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 3e-31
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 4e-31
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 6e-31
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 1e-27
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 2e-27
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 1e-26
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 4e-26
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 3e-25
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 3e-25
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 4e-25
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 4e-25
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 2e-24
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 3e-23
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 3e-23
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 2e-22
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 3e-22
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 8e-22
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 3e-21
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 9e-21
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 2e-20
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 3e-20
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 3e-20
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 5e-19
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 6e-19
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 2e-14
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 9e-12
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 2e-06
d2bhua197 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydro 6e-06
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 2e-04
d1uuqa_410 c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta 8e-04
d1qnra_344 c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T 0.001
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  310 bits (795), Expect = 4e-98
 Identities = 151/469 (32%), Positives = 206/469 (43%), Gaps = 37/469 (7%)

Query: 235 PQRDLIIYEVHVRGFTRHESSKTE-HPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELE 293
            Q+D +IYEVHVRGFT  ++S    + GTY G   K  +L  LG+  +E +P  E     
Sbjct: 13  AQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDA 72

Query: 294 YFSYNSVLGDYNY------------SSAGIRNCGHDAINEFKLLVREAHKRGIEVVMDVV 341
                +   + NY                          EF+ +V+  H  GI+V MDVV
Sbjct: 73  NDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVV 132

Query: 342 FNHTVEG-------NDKGPILSFRGVDNSVYYMLA-PKGEFYNYSGCGNTFNCNHPVVRQ 393
           +NHT EG            I S+RG+DN+ YY L      FY+ +G G  FN  + V + 
Sbjct: 133 YNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQN 192

Query: 394 FIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDS----VNVYGIPIEGDLLTTGTPLRS 449
            IVD L YW   M VDGFRFDLAS++              N        D   +   +  
Sbjct: 193 LIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSNVAINR 252

Query: 450 PPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTD 508
                 +       G+ L AE W  G   YQ+G FP    WSEWNG +RD +RQ      
Sbjct: 253 ILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQG--WSEWNGLFRDSLRQAQNELG 310

Query: 509 G---FAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGE-- 563
               +    A    GS NL+Q  GR PWNSINF+  HDG +L D+ S N  +N       
Sbjct: 311 SMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYG 370

Query: 564 DNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKG 623
            ++ G + N SW+ G        +    +RR  R      M+S G P++  GDEY  T  
Sbjct: 371 PSDGGTSTNYSWDQGMSAGTGAAV---DQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQ 427

Query: 624 GNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDF 672
            NNN Y  D+  N+  +    +   +F+ F   L  FR    +L  S +
Sbjct: 428 CNNNAYNLDSSANWLTYSWTTDQS-NFYTFAQRLIAFRKAHPALRPSSW 475
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Length = 97 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query788
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.91
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.73
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.67
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.52
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.37
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.26
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 98.82
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.59
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.39
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 98.21
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.11
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.1
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 98.08
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 97.96
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 97.63
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 97.22
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 97.12
d1x1na1523 Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax 97.07
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 97.01
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 96.96
d1tz7a1485 Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] 96.92
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 96.81
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 96.68
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 96.08
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 95.79
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 95.74
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 95.55
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 95.38
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 95.22
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 95.2
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 95.05
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 94.93
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 94.89
d2d3na187 Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 94.78
d1ud2a190 Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [Ta 94.63
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 94.24
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 93.86
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 93.75
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 93.73
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 93.1
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 93.06
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 92.4
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 92.02
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 91.92
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 91.88
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 91.76
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 90.24
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 90.2
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 89.51
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 89.27
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 89.13
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 88.95
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 88.33
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 87.73
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 87.5
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 87.01
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 86.5
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 85.93
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 84.64
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 84.47
d1ji1a1122 Maltogenic amylase, N-terminal domain N {Thermoact 84.07
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 84.05
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 83.77
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 83.5
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 82.5
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 82.46
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 81.79
d1jaea193 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 80.71
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=6.7e-62  Score=553.76  Aligned_cols=430  Identities=35%  Similarity=0.562  Sum_probs=319.5

Q ss_pred             CCCCCCCCCeEEEEEeccCcccCCCCCC-CCCcCHHHHHhhhHHHHHcCCCeEEECcccccCccCcc---cCCCCCCCcc
Q 003901          230 LPLKYPQRDLIIYEVHVRGFTRHESSKT-EHPGTYLGVVEKLDHLKDLGINCLELMPCHEFNELEYF---SYNSVLGDYN  305 (788)
Q Consensus       230 ~~~~~~~~~~viYei~v~~Ft~~~~s~~-~~~G~~~gl~~~L~yLk~LGvt~I~L~Pi~~~~~~~~~---~~~~~~~~wg  305 (788)
                      ..|..+++++||||||||+|++++++.. .++|||+||++||||||+||||+||||||+++......   +.....+|||
T Consensus         8 ~~~~~~~~d~viYei~v~~f~~~~~~~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~G   87 (475)
T d1bf2a3           8 TKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWG   87 (475)
T ss_dssp             CCCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSC
T ss_pred             CCCCCCCcceEEEEEEhhHhccCCCCCCccccCCHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCC
Confidence            3444568999999999999999876543 56899999999999999999999999999998765542   3334677899


Q ss_pred             cCCCCC--CCCCC-------CcHHHHHHHHHHHHHcCCEEEEEeeeccccCCCCCCCccc-------cCCCCCccceeeC
Q 003901          306 YSSAGI--RNCGH-------DAINEFKLLVREAHKRGIEVVMDVVFNHTVEGNDKGPILS-------FRGVDNSVYYMLA  369 (788)
Q Consensus       306 Y~~~~~--~~~~~-------G~~~elk~lV~~aH~~Gi~VilDvV~NH~~~~~~~~~~~~-------~~~~~~~~yy~~~  369 (788)
                      |++.+|  ++|+|       |+++|||+||++||++||+||||+|+||++..+++.....       +.+.....+|...
T Consensus        88 Y~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
T d1bf2a3          88 YMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELT  167 (475)
T ss_dssp             CCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBC
T ss_pred             CCcccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcEEEEEeccccccCCCcccccCCCcCccccccCcccccccccC
Confidence            999998  88888       9999999999999999999999999999999887653211       0000111122222


Q ss_pred             C-CCCcccCCCCccccCCCCHHHHHHHHHHHHHHHHhcCccEEEEecccccccCCCcccccc------ccCccccCCccc
Q 003901          370 P-KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN------VYGIPIEGDLLT  442 (788)
Q Consensus       370 ~-~g~~~~~~g~~~dln~~~p~vr~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~~w~~~~------~~g~~~~~~~~~  442 (788)
                      . ...+..+.++.++||+.||+|+++|++++++|++++||||||+|+++++.+.  +|....      .....+..+.. 
T Consensus       168 ~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-  244 (475)
T d1bf2a3         168 SGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNS--CLNGAYTASAPNCPNGGYNFDAA-  244 (475)
T ss_dssp             TTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBC--CSSSSCCTTSTTCTTCSCCBCTT-
T ss_pred             CCccccccCCCccCccchhhhHHHHHHHHHHHhhhhhcCCceEEEehHhhhchh--hhccchhccCccCcccccchhhh-
Confidence            2 2223356677899999999999999999999999999999999999999763  222211      00000111100 


Q ss_pred             cCCCCCChHHHHHHH---cC--CccccceeeeeeccCCC-cccccccCCCCcccccchhHHHHHHHHHhCC---CCcHHH
Q 003901          443 TGTPLRSPPLIDLIS---ND--PILRGVKLIAEAWDTGG-LYQVGIFPHWGIWSEWNGKYRDIVRQFIKGT---DGFAGA  513 (788)
Q Consensus       443 ~g~~~~~~~~~~~i~---~~--~~~~~~~ligE~w~~~~-~~~~~~~~~~~~~~~~n~~f~~~lr~~~~g~---~~~~~~  513 (788)
                          .....+...+.   .+  ...+...+++|.|+.+. ....+.++.  .++.|+..+.+.++.+....   ......
T Consensus       245 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (475)
T d1bf2a3         245 ----DSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLRQAQNELGSMTIYVTQ  318 (475)
T ss_dssp             ----CTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT--TCEEECHHHHHHHHHHHHCBTTBCCCHHH
T ss_pred             ----hhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCCcc--chHHhcchhHHHHHHHhcccccchhhHhh
Confidence                00111111111   11  22345678899887652 223333332  45778999999999887553   334556


Q ss_pred             HHHHHhCCCCccCCCCCCCCcceeecccCCCcchhhhhhhcccccccCCCC--CCCCCCCCCCCCcCCCCcchhHHHHHH
Q 003901          514 FAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGED--NNDGETHNNSWNCGQEGEFANILVKKL  591 (788)
Q Consensus       514 ~~~~l~~~~~~~~~~~~~p~~~vnfv~nHD~~rl~d~~~~~~~~n~~~g~~--~~dg~~~~~sw~~g~~~~~~~~~~~~~  591 (788)
                      .+..+.+....+...+..+..++||+++||+.++.+++.+...++......  ..++...+.+|+.+........   ..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  395 (475)
T d1bf2a3         319 DANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTGAA---VD  395 (475)
T ss_dssp             HHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSCCH---HH
T ss_pred             hhhhcccchhhhhccCcCHHHHHhHHHhcchhhHHHHhhhhhhhhHhhccccccCCCcccccccccCccCCcchh---HH
Confidence            666777766666555677889999999999999999998887777654432  2345667788888776655433   23


Q ss_pred             HHHHHHHHHHHHHhcCCceEEecccccccCCCCCCCCcCCCCCccccccCcccCcchHHHHHHHHHHHHHhhCccCCCCC
Q 003901          592 RRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSD  671 (788)
Q Consensus       592 ~~~~~r~a~alllt~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~r~Li~lRk~~~aL~~g~  671 (788)
                      +.+++|++++++||+||+||||||||+|+++.|++|+|++++..++++|+..+.+ .++++|+|+||+|||+|||||.|+
T Consensus       396 ~~~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~~~~~~~-~~l~~~~~~Li~lR~~~paLr~~~  474 (475)
T d1bf2a3         396 QRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQ-SNFYTFAQRLIAFRKAHPALRPSS  474 (475)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHHHCGGGSCSS
T ss_pred             HHHHHHHHHHHHHHhccchheecCHhhCccCCCCcccccCCCccCccCCCccchh-HHHHHHHHHHHHHHhcChhhCCCC
Confidence            4677889999999999999999999999999999999999999999999987765 899999999999999999999987


Q ss_pred             C
Q 003901          672 F  672 (788)
Q Consensus       672 ~  672 (788)
                      |
T Consensus       475 ~  475 (475)
T d1bf2a3         475 W  475 (475)
T ss_dssp             C
T ss_pred             C
Confidence            5
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure