Citrus Sinensis ID: 003947
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 784 | 2.2.26 [Sep-21-2011] | |||||||
| P13708 | 805 | Sucrose synthase OS=Glyci | no | no | 0.997 | 0.971 | 0.759 | 0.0 | |
| Q01390 | 805 | Sucrose synthase OS=Vigna | N/A | no | 0.997 | 0.971 | 0.758 | 0.0 | |
| Q9LXL5 | 808 | Sucrose synthase 4 OS=Ara | yes | no | 0.983 | 0.954 | 0.767 | 0.0 | |
| P49040 | 808 | Sucrose synthase 1 OS=Ara | no | no | 0.998 | 0.969 | 0.753 | 0.0 | |
| P31926 | 806 | Sucrose synthase OS=Vicia | N/A | no | 0.998 | 0.971 | 0.742 | 0.0 | |
| O65026 | 805 | Sucrose synthase OS=Medic | N/A | no | 0.997 | 0.971 | 0.739 | 0.0 | |
| P10691 | 805 | Sucrose synthase OS=Solan | N/A | no | 0.982 | 0.956 | 0.750 | 0.0 | |
| P49037 | 805 | Sucrose synthase OS=Solan | N/A | no | 0.982 | 0.956 | 0.749 | 0.0 | |
| P49039 | 805 | Sucrose synthase OS=Solan | N/A | no | 0.982 | 0.956 | 0.745 | 0.0 | |
| P49035 | 808 | Sucrose synthase isoform | N/A | no | 0.983 | 0.954 | 0.739 | 0.0 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1256 bits (3249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/795 (75%), Positives = 683/795 (85%), Gaps = 13/795 (1%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVD--AESN-----GAAIADVL 49
+ ++ ETL+ + L LLS IE G GI + Q+++ + E N A +VL
Sbjct: 12 LRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVL 71
Query: 50 NATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGN 109
+TQEA V PWVALA+R PGVW Y+RVNV + VEE+ ++YL FKEE+VDG SNGN
Sbjct: 72 RSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKEELVDG-SSNGN 130
Query: 110 FAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGK 168
F E+DFEPF A P PTL+ SIG+G++FLNRH+SAKLF+DKES+ LLEFLR+HS GK
Sbjct: 131 FVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGK 190
Query: 169 NMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228
+MLN++IQ+ LQ LR AE+YL + P+T Y+EFE KFQEIGLERGWGDNAE VL
Sbjct: 191 TLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDNAERVLES 250
Query: 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQV 288
IQLLLDLL+AP+ TLETFLG+IP VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQV
Sbjct: 251 IQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQV 310
Query: 289 RALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTE 348
RALENEML RIKQQGLDI PRILIITRLLPDAVGTTCGQR+EKV+GT++S ILRVPFRTE
Sbjct: 311 RALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTE 370
Query: 349 EGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408
+GIVRKWISRFEVWPYLET+TEDVA E+ +ELQ KPDLI+GNYSDGNIVASLLAHKL VT
Sbjct: 371 KGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVT 430
Query: 409 QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468
QCTIAHALE TKYP+SDI WKKL+++YHFSCQFTADLFAMN TDFIITSTFQEIAGSKDT
Sbjct: 431 QCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDT 490
Query: 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528
VGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGAD TIYFP+ E RRL FH EIEE
Sbjct: 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHPEIEE 550
Query: 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD 588
LLYS VEN+EH+CVLKD SKPI+FTMARLDRVKN+TGLVEWYGKNAKLRELVNLVVV GD
Sbjct: 551 LLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGD 610
Query: 589 RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648
RRKESKDLEE+AEMKKMYGLI+TYKLNGQFRWISSQMNRVRNGELYR ICDT+GAFVQPA
Sbjct: 611 RRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPA 670
Query: 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708
+YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPY GD+A +LVDFFEKCK
Sbjct: 671 VYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCK 730
Query: 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYS 768
+DP HWD+IS+ GL+RI+EKYTW+IYS+RLL L+GVYGFWKH+S LD RE RYLEMFY+
Sbjct: 731 LDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYA 790
Query: 769 LMYRKQVQTVPLAVD 783
L YRK ++VPLA +
Sbjct: 791 LKYRKLAESVPLAAE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|Q01390|SUSY_VIGRR Sucrose synthase OS=Vigna radiata var. radiata GN=SS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/795 (75%), Positives = 679/795 (85%), Gaps = 13/795 (1%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSL---VDAES----NGAAIADVL 49
+ ++ ETLS + L LLS IE G GI + Q+++ + ES A +VL
Sbjct: 12 LRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVL 71
Query: 50 NATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGN 109
+TQEA V PWVALA+R PGVW Y+RVNV + VE + ++YL FKEE+VDG SNGN
Sbjct: 72 RSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDG-SSNGN 130
Query: 110 FAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGK 168
F E+DFEPF A P PTL+ SIG+G++FLNRH+SAKLF+DKES+ LLEFLR+HS GK
Sbjct: 131 FVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGK 190
Query: 169 NMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228
+MLN++IQ+ LQ LR AE+YL + P+T Y+ FE KFQEIGLERGWGDNAE VL
Sbjct: 191 TLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSAFEHKFQEIGLERGWGDNAERVLES 250
Query: 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQV 288
IQLLLDLL+AP+ TLETFLG+IP VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQV
Sbjct: 251 IQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQV 310
Query: 289 RALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTE 348
RALENEML RIKQQGLDI PRILIITRLLPDAVGTTCGQR+EKV+GT++S ILRVPFRTE
Sbjct: 311 RALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTE 370
Query: 349 EGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408
GIVRKWISRFEVWPYLET+TEDVA E+ +ELQ KPDLI+GNYSDGNIVASLLAHKL VT
Sbjct: 371 NGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVT 430
Query: 409 QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468
QCTIAHALE TKYP+SDI WKKL+++YHFSCQFTADLFAMN TDFIITSTFQEIAGSKDT
Sbjct: 431 QCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDT 490
Query: 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528
VGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGAD TIYFP+ E RRL FH+EIEE
Sbjct: 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHTEIEE 550
Query: 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD 588
LLYS VEN+EH+CVLKD SKPI+FTMARLDRVKN+TGLVEWYGKNAKLRELVNLVVV GD
Sbjct: 551 LLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGD 610
Query: 589 RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648
RRKESKDLEE+AEMKKMY LI+TYKLNGQFRWISSQMNRVRNGELYR I DTKGAFVQPA
Sbjct: 611 RRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIADTKGAFVQPA 670
Query: 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708
+YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPY GD+A +LV+FFEK K
Sbjct: 671 VYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK 730
Query: 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYS 768
VDP HWD+ISQ GL+RI+EKYTW+IYS+RLL L+GVYGFWKH+S LD RE RYLEMFY+
Sbjct: 731 VDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYA 790
Query: 769 LMYRKQVQTVPLAVD 783
L YRK ++VPLAV+
Sbjct: 791 LKYRKLAESVPLAVE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vigna radiata var. radiata (taxid: 3916) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q9LXL5|SUS4_ARATH Sucrose synthase 4 OS=Arabidopsis thaliana GN=SUS4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/780 (76%), Positives = 663/780 (85%), Gaps = 9/780 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQEAAVSSPWVALA 65
LLS +E G GI + QI++ +A + G A + L + QEA V P+VALA
Sbjct: 30 FALLSRVEAKGKGILQHHQIIAEFEAMPLETQKKLKGGAFFEFLRSAQEAIVLPPFVALA 89
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW Y+RVN+ + VEE+ S+YL FKEE+VDG K NGNF E+DFEPF A P
Sbjct: 90 VRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEELVDGIK-NGNFTLELDFEPFNAAFPR 148
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTL+ IG G+EFLNRH+SAKLF+DKES+ LL+FLR+HSH GK +MLN +IQ+L TLQ
Sbjct: 149 PTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKFLRLHSHEGKTLMLNNRIQNLNTLQH 208
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
+LR AE+YL L P+T Y+EFE KFQEIGLERGWGD AE VL MI+LLLDLL+AP+ TL
Sbjct: 209 NLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWGDTAERVLNMIRLLLDLLEAPDPCTL 268
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQVRALE EML RIKQQGL
Sbjct: 269 ENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALETEMLQRIKQQGL 328
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDA GTTCGQR+EKVYG++Y DILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 329 NITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCDILRVPFRTEKGIVRKWISRFEVWPY 388
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LETFTEDVA EI +ELQ KPDLIIGNYSDGN+VASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 389 LETFTEDVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDS 448
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKLD+KYHFSCQFTADL AMN TDFIITSTFQEIAGSKDTVGQYESH +F+LPGLY
Sbjct: 449 DIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHRSFTLPGLY 508
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM+IYF Y EEKRRL FH EIEELLYS VEN+EHLCVLK
Sbjct: 509 RVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRLTAFHLEIEELLYSDVENEEHLCVLK 568
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D KPI+FTMARLDRVKNL+GLVEWYGKN +LRELVNLVVVGGDRRKES+D EE+AEMKK
Sbjct: 569 DKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGGDRRKESQDNEEKAEMKK 628
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
MY LI+ YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 629 MYELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 688
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGFHIDPY GD+A L DFF KCK DP HWD+IS GGL+R
Sbjct: 689 LPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCKHDPSHWDQISLGGLER 748
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784
IQEKYTW+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+L YR Q VPLA +E
Sbjct: 749 IQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRPLAQAVPLAHEE 808
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49040|SUS1_ARATH Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/792 (75%), Positives = 675/792 (85%), Gaps = 9/792 (1%)
Query: 1 MAQQFIETLSKSLTLLSSIERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQ 53
+ + + ++ L LLS +E G GI ++ QI++ +A + G D+L +TQ
Sbjct: 18 LNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQ 77
Query: 54 EAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFE 113
EA V PWVALA+R PGVW Y+RVN+ + VEE+ +++L FKEE+VDG K NGNF E
Sbjct: 78 EAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVK-NGNFTLE 136
Query: 114 VDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMML 172
+DFEPF A +P PTL IG+G++FLNRH+SAKLF+DKES+ LL+FLR+HSH GKN+ML
Sbjct: 137 LDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLML 196
Query: 173 NEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLL 232
+EKIQ+L TLQ +LR AE+YL+ L +T Y EFE KF+EIGLERGWGDNAE VL MI+LL
Sbjct: 197 SEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLL 256
Query: 233 LDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALE 292
LDLL+AP+ TLETFLG++P VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQVRALE
Sbjct: 257 LDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALE 316
Query: 293 NEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIV 352
EML RIKQQGL+I PRILI+TRLLPDAVGTTCG+R+E+VY ++Y DILRVPFRTE+GIV
Sbjct: 317 IEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIV 376
Query: 353 RKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI 412
RKWISRFEVWPYLET+TED A E+ +EL KPDLIIGNYSDGN+VASLLAHKL VTQCTI
Sbjct: 377 RKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 436
Query: 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQY 472
AHALE TKYPDSDI WKKLDDKYHFSCQFTAD+FAMN TDFIITSTFQEIAGSK+TVGQY
Sbjct: 437 AHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQY 496
Query: 473 ESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532
ESHTAF+LPGLYRVV+GID FDPKFNIVSPGADM+IYFPY EEKRRL FHSEIEELLYS
Sbjct: 497 ESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYS 556
Query: 533 PVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKE 592
VENKEHLCVLKD KPILFTMARLDRVKNL+GLVEWYGKN +LREL NLVVVGGDRRKE
Sbjct: 557 DVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKE 616
Query: 593 SKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652
SKD EE+AEMKKMY LI+ YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPALYEA
Sbjct: 617 SKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEA 676
Query: 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPG 712
FGLTVVEAMTCGLPTFATC GGPAEIIVHGKSGFHIDPY GDQA L DFF KCK DP
Sbjct: 677 FGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPS 736
Query: 713 HWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYR 772
HWDEIS+GGL+RI+EKYTW+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+L YR
Sbjct: 737 HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYR 796
Query: 773 KQVQTVPLAVDE 784
Q VPLA D+
Sbjct: 797 PLAQAVPLAQDD 808
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P31926|SUSY_VICFA Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/796 (74%), Positives = 676/796 (84%), Gaps = 13/796 (1%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVD--AESN-----GAAIADVL 49
+ ++ ETL+ + L LLS IE G GI + Q+++ + E N A +VL
Sbjct: 12 LRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVL 71
Query: 50 NATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGN 109
+TQEA V PWVALA+R PGVW Y+RVNV + VE + +++L FKEE+VDG +NGN
Sbjct: 72 RSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKEELVDG-SANGN 130
Query: 110 FAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGK 168
F E+DFEPF A P PTL+ SIG+G++FLNRH+SAKLF+DKES+ LLEFLR+HS+ GK
Sbjct: 131 FVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGK 190
Query: 169 NMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228
+MLN++IQ+ +LQ LR AE+YLS + P+T Y+EFE +FQEIGLERGWGD+AE VL
Sbjct: 191 TLMLNDRIQNPDSLQHVLRKAEEYLSTVDPETPYSEFEHRFQEIGLERGWGDSAERVLES 250
Query: 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQV 288
IQLLLDLL+AP+ TLETFL +IP VFNVVI +PHGYFAQD+VLGYPDTGGQVVYILDQV
Sbjct: 251 IQLLLDLLEAPDPCTLETFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTGGQVVYILDQV 310
Query: 289 RALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTE 348
RALE+EML RIK+QGLDI PRILIITRLLPDAVGTTCGQR+EKVYGT++ ILRVPFR +
Sbjct: 311 RALESEMLNRIKKQGLDIVPRILIITRLLPDAVGTTCGQRLEKVYGTEHCHILRVPFRDQ 370
Query: 349 EGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408
+GIVRKWISRFEVWPYLET+TEDVA E+ +ELQ KPDLI+GNYSDGNIVASLLAHKL VT
Sbjct: 371 KGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVT 430
Query: 409 QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468
QCTIAHALE TKYP+SDI WKK ++KYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDT
Sbjct: 431 QCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDT 490
Query: 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528
VGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGAD TIYFPY E RRL F+ EIEE
Sbjct: 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFYPEIEE 550
Query: 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD 588
LLYS VEN+EH+CVLKD SKPI+FTMARLDRVKN+TGLVEWYGKNAKLRELVNLVVV GD
Sbjct: 551 LLYSTVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGD 610
Query: 589 RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648
RRKESKDLEE+AEMKKMY LI+TYKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA
Sbjct: 611 RRKESKDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPA 670
Query: 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708
+YEAFGLTVVEAM GLPTFAT NGGPAEIIVHGKSGFHIDPY GD+A +LV+FFEK K
Sbjct: 671 VYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK 730
Query: 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYS 768
DP HWD+IS GGL+RI+EKYTW+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+
Sbjct: 731 ADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYA 790
Query: 769 LMYRKQVQTVPLAVDE 784
L YRK ++VPLAV+E
Sbjct: 791 LKYRKLAESVPLAVEE 806
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vicia faba (taxid: 3906) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|O65026|SUSY_MEDSA Sucrose synthase OS=Medicago sativa PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/795 (73%), Positives = 672/795 (84%), Gaps = 13/795 (1%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSL---VDAES----NGAAIADVL 49
+ ++ ETL+ + L LLS +E G GI + Q+++ + ES A +VL
Sbjct: 12 LKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVL 71
Query: 50 NATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGN 109
+TQEA V PWVALA+R PG+W Y+RVNV + VE + +++L FKEE+VDG +NGN
Sbjct: 72 RSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDG-SANGN 130
Query: 110 FAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGK 168
F E+DFEPF A P PTL+ SIG+G+ FLNRH+SAKLF+DKES+ LLEFLR+HS+ GK
Sbjct: 131 FVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGK 190
Query: 169 NMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228
+MLN++IQ+ +LQ LR AE+YLS + P+T Y+EFE +FQEIGLERGWGD AE VL
Sbjct: 191 TLMLNDRIQNPDSLQHVLRKAEEYLSTIDPETPYSEFEHRFQEIGLERGWGDTAERVLES 250
Query: 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQV 288
IQLLLDLL+AP+ TLE+FL +IP VFNVVI +PHGYFAQD+VLGYPDTGGQVVYILDQV
Sbjct: 251 IQLLLDLLEAPDPCTLESFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTGGQVVYILDQV 310
Query: 289 RALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTE 348
RALE+EML RIK+QGLDI PRILIITRLLPDAVGTTCGQR+EKVYGT++ ILRVPFR E
Sbjct: 311 RALESEMLSRIKKQGLDIIPRILIITRLLPDAVGTTCGQRLEKVYGTEHCHILRVPFRDE 370
Query: 349 EGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408
+GIVRKWISRFEVWPYLET+TEDVA E+ +ELQ KPDLI+GNYSDGNIVASLLAHKL VT
Sbjct: 371 KGIVRKWISRFEVWPYLETYTEDVAHELAKELQSKPDLIVGNYSDGNIVASLLAHKLGVT 430
Query: 409 QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468
QCTIAHALE TKYP+SDI WKK ++KYHFSCQFTADLFAMN TDFIITSTFQEIAGSKD
Sbjct: 431 QCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDK 490
Query: 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528
VGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGAD TIYFPY E RRL F+ EIEE
Sbjct: 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFYPEIEE 550
Query: 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD 588
LLYS VEN+EH+CVLKD +KPI+FTMARLDRVKN+TGLVEWYGKNAKLRELVNLVVV GD
Sbjct: 551 LLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGD 610
Query: 589 RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648
RRKESKDLEE AEMKKMYGLI+TYKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA
Sbjct: 611 RRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPA 670
Query: 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708
+YEAFGLTVVEAM GLPTFAT NGGPAEIIVHGKSGFHIDPY GD+A +LV+FFEK K
Sbjct: 671 VYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK 730
Query: 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYS 768
DP HWD+ISQGGL+RI+EKYTW IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+
Sbjct: 731 ADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYA 790
Query: 769 LMYRKQVQTVPLAVD 783
L YRK ++VPLAV+
Sbjct: 791 LKYRKLAESVPLAVE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Medicago sativa (taxid: 3879) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P10691|SUS1_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1211 bits (3133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/779 (75%), Positives = 653/779 (83%), Gaps = 9/779 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQEAAVSSPWVALA 65
L LS IE G GI K ++L+ DA + N A ++L +TQEA V PWVALA
Sbjct: 28 LLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLNEHAFEELLKSTQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE+SV +YL FKEE+VDG SNGNF E+DFEPF A P
Sbjct: 88 IRLRPGVWEYIRVNVNALVVEELSVPEYLQFKEELVDG-ASNGNFVLELDFEPFTASFPK 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTL+ SIG+G+EFLNRH+SAK+F+DKESM LLEFLR H + GK MMLN++IQ+ TLQ+
Sbjct: 147 PTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRAHHYKGKTMMLNDRIQNSNTLQN 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL ML P+T Y EFE KFQEIGLE+GWGD AE VL M+ +LLDLL+AP+S TL
Sbjct: 207 VLRKAEEYLIMLPPETPYFEFEHKFQEIGLEKGWGDTAERVLEMVCMLLDLLEAPDSCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI +PHGYFAQ+NVLGYPDTGGQVVYILDQV ALE EML RIK+QGL
Sbjct: 267 EKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYILDQVPALEREMLKRIKEQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
DI PRILI+TRLLPDAVGTTCGQR+EKVYG ++S ILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 DIIPRILIVTRLLPDAVGTTCGQRIEKVYGAEHSHILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
+ETF EDVA EI ELQ KPDLIIGNYS+GN+ ASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 METFIEDVAKEISAELQAKPDLIIGNYSEGNLAASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKK D+KYHFS QFTADL AMN TDFIITSTFQEIAGSKDTVGQYESH AF++PGLY
Sbjct: 447 DIYWKKFDEKYHFSSQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GI+ FDPKFNIVSPGAD+ +YF Y E ++RL FH EI+ELLYS VEN EHLCVLK
Sbjct: 507 RVVHGINVFDPKFNIVSPGADINLYFSYSETEKRLTAFHPEIDELLYSDVENDEHLCVLK 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWY KN +LR LVNLVVVGGDRRKESKDLEEQAEMKK
Sbjct: 567 DRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRGLVNLVVVGGDRRKESKDLEEQAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
MY LI+T+ LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCG
Sbjct: 627 MYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFAT +GGPAEIIVHGKSGFHIDPY G+QA +L DFFEKCK DP HW+ IS GGLKR
Sbjct: 687 LPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVD 783
I+EKYTW+IYSE LL L+ VYGFWKH+SKLD E RYLEMFY+L YRK + VPLA +
Sbjct: 747 IEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49037|SUSY_SOLLC Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1210 bits (3131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/779 (74%), Positives = 654/779 (83%), Gaps = 9/779 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQEAAVSSPWVALA 65
L LS IE G GI K ++L+ DA + N A ++L +TQEA V PWVALA
Sbjct: 28 LLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLNEHAFEELLKSTQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW Y+RVNV + VEE+SV +YL FKEE+VDG SNGNF E+DFEPF A P
Sbjct: 88 IRLRPGVWEYVRVNVNALVVEELSVPEYLQFKEELVDG-ASNGNFVLELDFEPFTASFPK 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTL+ SIG+G+EFLNRH+SAK+F+DKESM LLEFLR H + GK MMLN++I + TLQ+
Sbjct: 147 PTLTKSIGNGVEFLNRHLSAKMFHDKESMAPLLEFLRAHHYKGKTMMLNDRIHNSNTLQN 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL ML P+T + EFE KFQEIGLE+GWGD AE VL M+ +LLDLL+AP+S TL
Sbjct: 207 VLRKAEEYLIMLPPETPFFEFEHKFQEIGLEKGWGDTAERVLEMVCMLLDLLEAPDSCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI +PHGYFAQ+NVLGYPDTGGQVVYILDQV ALE EML RIK+QGL
Sbjct: 267 EKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYILDQVPALEREMLKRIKEQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
DI PRILI+TRLLPDAVGTTCGQR+EKVYGT++S ILRVPF TE+GIVRKWISRFEVWPY
Sbjct: 327 DIIPRILIVTRLLPDAVGTTCGQRLEKVYGTEHSHILRVPFGTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
+ETF EDVA EI ELQ KPDLIIGNYS+GN+ ASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 METFIEDVAKEISAELQAKPDLIIGNYSEGNLAASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKK D+KYHFS QFTADL AMN TDFIITSTFQEIAGSKDTVGQYESH AF++PGLY
Sbjct: 447 DIYWKKFDEKYHFSSQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GI+ FDPKFNIVSPGAD+ +YFPY E ++RL FH EI+ELLYS VEN EHLCVLK
Sbjct: 507 RVVHGINVFDPKFNIVSPGADINLYFPYSESEKRLTAFHPEIDELLYSDVENDEHLCVLK 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWY KN +LR LVNLVVVGGDRRKESKDLEEQAEMKK
Sbjct: 567 DRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRGLVNLVVVGGDRRKESKDLEEQAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
MY LI+T+ LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCG
Sbjct: 627 MYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFAT +GGPAEIIVHGKSGFHIDPY G+QA +L DFFEKCK +P HW+ IS GGLKR
Sbjct: 687 LPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVD 783
IQEKYTW+IYSERLL L+ VYGFWKH+SKLD E RYLEMFY+L YRK + VPLA +
Sbjct: 747 IQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49039|SUS2_SOLTU Sucrose synthase OS=Solanum tuberosum PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/779 (74%), Positives = 658/779 (84%), Gaps = 9/779 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQEAAVSSPWVALA 65
L LS IE G GI K Q+L+ ++ + N A +VL +TQEA V PWVALA
Sbjct: 28 LLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLNDHAFEEVLKSTQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW Y+RVNV + VEE++V ++L FKEE+V+G SN NF E+DFEPF A P
Sbjct: 88 IRLRPGVWEYVRVNVNALIVEELTVPEFLQFKEELVNG-TSNDNFVLELDFEPFTASFPK 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTL+ SIG+G+EFLNRH+SAK+F+DKESM LLEFLRVH + GK MMLN++IQ+L TLQ
Sbjct: 147 PTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRVHHYKGKTMMLNDRIQNLYTLQK 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL+ L+P+TSY+ FE KFQEIGLERGWGD AE VL MI +LLDLL+AP+S TL
Sbjct: 207 VLRKAEEYLTTLSPETSYSAFEHKFQEIGLERGWGDTAERVLEMICMLLDLLEAPDSCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI +PHGYFAQ+NVLGYPDTGGQVVYILDQV ALE EML RIK+QGL
Sbjct: 267 EKFLGRIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYILDQVPALEREMLKRIKEQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
DI PRILI+TRLLPDAVGTTCGQR+EKV+GT++S ILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 DIKPRILIVTRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
+ETF EDV EI ELQ KPDLIIGNYS+GN+ ASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 METFIEDVGKEITAELQAKPDLIIGNYSEGNLAASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI K D+KYHFS QFTADL AMN TDFIITSTFQEIAGSKDTVGQYESH AF++PGLY
Sbjct: 447 DIYLNKFDEKYHFSAQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGAD+ +YFPY E+++RL FH EIE+LL+S VEN+EHLCVLK
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADVNLYFPYSEKEKRLTTFHPEIEDLLFSDVENEEHLCVLK 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPI+FTMARLDRVKNLTGLVEWY KN +LRELVNLVVVGGDRRKESKDLEEQAEMKK
Sbjct: 567 DRNKPIIFTMARLDRVKNLTGLVEWYAKNPRLRELVNLVVVGGDRRKESKDLEEQAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
MY LI T+ LNGQFRWISSQMNRVRNGELYRYI DT+GAFVQPA YEAFGLTVVEAM+CG
Sbjct: 627 MYELIKTHNLNGQFRWISSQMNRVRNGELYRYIADTRGAFVQPAFYEAFGLTVVEAMSCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFAT GGPAEIIVHGKSGF IDPY G+QA +L DFFEKCKVDP HW+ IS+GGLKR
Sbjct: 687 LPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVD 783
IQEKYTW+IYS+RLL L+ VYGFWKH+SKLD E RYLEMFY+L +RK Q VPLAV+
Sbjct: 747 IQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1203 bits (3113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/782 (73%), Positives = 653/782 (83%), Gaps = 11/782 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA---------ESNGAAIADVLNATQEAAVSSPWVA 63
L LS IE G GI K Q+L+ +A + A A+V+ +TQEA VS PWVA
Sbjct: 28 LMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPWVA 87
Query: 64 LALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-L 122
LA+R PGVW Y+RVNV + VEE+SV +YL FKEE+V G S+ NF E+DF PF A
Sbjct: 88 LAIRLRPGVWEYVRVNVHHLVVEELSVPQYLQFKEELVIG-SSDANFVLELDFAPFTASF 146
Query: 123 PHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTL 182
P PTL+ SIG+G+EFLNRH+SAK+F+ K+SM LLEFLR+H++ GK +MLN ++Q++ L
Sbjct: 147 PRPTLTKSIGNGVEFLNRHLSAKMFHGKDSMHPLLEFLRLHNYNGKTLMLNNRVQNVNGL 206
Query: 183 QSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESS 242
QS LR A YLS L DT Y+EFE KFQEIG ERGWGD AE V M +LLDLL+AP++S
Sbjct: 207 QSMLRKAGDYLSTLPSDTPYSEFEHKFQEIGFERGWGDTAERVTEMFHMLLDLLEAPDAS 266
Query: 243 TLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQ 302
TLETFLGKIP VFNVVI +PHGYFAQ+NVLGYPDTGGQVVYILDQV ALE EM+ RIK+Q
Sbjct: 267 TLETFLGKIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYILDQVPALEREMIKRIKEQ 326
Query: 303 GLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVW 362
GLDI PRILI+TRLLPDAVGTTC QR+EKV+G +++ ILRVPFRTE+GI+RKWISRFEVW
Sbjct: 327 GLDIKPRILIVTRLLPDAVGTTCNQRLEKVFGAEHAHILRVPFRTEKGILRKWISRFEVW 386
Query: 363 PYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYP 422
PY+ETFTEDVA EI ELQ KPDLIIGNYS+GN+VASLLAHKL VTQCTIAHALE TKYP
Sbjct: 387 PYIETFTEDVAKEIALELQAKPDLIIGNYSEGNLVASLLAHKLGVTQCTIAHALEKTKYP 446
Query: 423 DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPG 482
DSDI W+K D KYHFS QFTADL AMN TDFIITSTFQEIAGSKDTVGQYESHTAF++PG
Sbjct: 447 DSDIYWEKFDKKYHFSSQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTMPG 506
Query: 483 LYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCV 542
LYRVV+GID FDPKFNIVSPGAD ++YF Y E+++RL H EIEELLYS VEN+EHLC+
Sbjct: 507 LYRVVHGIDVFDPKFNIVSPGADTSVYFSYKEKEKRLTTLHPEIEELLYSSVENEEHLCI 566
Query: 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEM 602
+KD +KPILFTMARLD VKNLTG VEWY K+ KLRELVNLVVVGGDRRKESKDLEEQA+M
Sbjct: 567 IKDKNKPILFTMARLDNVKNLTGFVEWYAKSPKLRELVNLVVVGGDRRKESKDLEEQAQM 626
Query: 603 KKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 662
KKMY LIDTYKLNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMT
Sbjct: 627 KKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMT 686
Query: 663 CGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722
CGLPTFAT +GGPAEIIVHGKSGFHIDPY G+Q +LV+FFEKCK DP WD IS GGL
Sbjct: 687 CGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGL 746
Query: 723 KRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAV 782
KRIQEKYTW+IYSERLL L+GVYGFWKH+SKLD E RYLEMFY+L YRK ++VPLA
Sbjct: 747 KRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAK 806
Query: 783 DE 784
DE
Sbjct: 807 DE 808
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 784 | ||||||
| 345104515 | 805 | sucrose synthase Sus1 [Gossypium aridum] | 0.979 | 0.954 | 0.810 | 0.0 | |
| 345104513 | 805 | sucrose synthase Sus1 [Gossypium klotzsc | 0.979 | 0.954 | 0.809 | 0.0 | |
| 324984225 | 805 | sucrose synthase [Gossypium herbaceum su | 0.979 | 0.954 | 0.809 | 0.0 | |
| 324984223 | 805 | sucrose synthase [Gossypium barbadense] | 0.979 | 0.954 | 0.808 | 0.0 | |
| 345104507 | 805 | sucrose synthase Sus1 [Gossypium armouri | 0.979 | 0.954 | 0.808 | 0.0 | |
| 345104483 | 805 | sucrose synthase Sus1 [Gossypium musteli | 0.979 | 0.954 | 0.808 | 0.0 | |
| 345104517 | 805 | sucrose synthase Sus1 [Gossypium gossypi | 0.979 | 0.954 | 0.806 | 0.0 | |
| 345104475 | 805 | sucrose synthase Sus1 [Gossypium thurber | 0.979 | 0.954 | 0.806 | 0.0 | |
| 345104489 | 805 | sucrose synthase Sus1 [Gossypium darwini | 0.979 | 0.954 | 0.805 | 0.0 | |
| 345104479 | 805 | sucrose synthase Sus1 [Gossypium schwend | 0.979 | 0.954 | 0.806 | 0.0 |
| >gi|345104515|gb|AEN71079.1| sucrose synthase Sus1 [Gossypium aridum] | Back alignment and taxonomy information |
|---|
Score = 1297 bits (3356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/777 (81%), Positives = 684/777 (88%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YLS L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLSTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium aridum Species: Gossypium aridum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104513|gb|AEN71078.1| sucrose synthase Sus1 [Gossypium klotzschianum] | Back alignment and taxonomy information |
|---|
Score = 1295 bits (3352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKLDDKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLDDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium klotzschianum Species: Gossypium klotzschianum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|324984225|gb|ADY68846.1| sucrose synthase [Gossypium herbaceum subsp. africanum] | Back alignment and taxonomy information |
|---|
Score = 1294 bits (3348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +A+ VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLANGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD AE VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT++SDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEHSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH EIE+LLYS VEN+EHLCVLK
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHPEIEDLLYSKVENEEHLCVLK 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LID Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIDKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium herbaceum subsp. africanum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|324984223|gb|ADY68845.1| sucrose synthase [Gossypium barbadense] gi|324984227|gb|ADY68847.1| sucrose synthase [Gossypium raimondii] gi|345104481|gb|AEN71062.1| sucrose synthase Sus1 [Gossypium turneri] gi|345104485|gb|AEN71064.1| sucrose synthase Sus1 [Gossypium mustelinum] gi|345104497|gb|AEN71070.1| sucrose synthase Sus1 [Gossypium barbadense var. brasiliense] gi|345104501|gb|AEN71072.1| sucrose synthase Sus1 [Gossypium barbadense var. peruvianum] gi|345104511|gb|AEN71077.1| sucrose synthase Sus1 [Gossypium davidsonii] | Back alignment and taxonomy information |
|---|
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium barbadense Species: Gossypium barbadense Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104507|gb|AEN71075.1| sucrose synthase Sus1 [Gossypium armourianum] gi|345104509|gb|AEN71076.1| sucrose synthase Sus1 [Gossypium harknessii] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/777 (80%), Positives = 681/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQSLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium armourianum Species: Gossypium armourianum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104483|gb|AEN71063.1| sucrose synthase Sus1 [Gossypium mustelinum] gi|345104487|gb|AEN71065.1| sucrose synthase Sus1 [Gossypium darwinii] gi|345104495|gb|AEN71069.1| sucrose synthase Sus1 [Gossypium barbadense var. brasiliense] gi|345104499|gb|AEN71071.1| sucrose synthase Sus1 [Gossypium barbadense var. peruvianum] gi|345104503|gb|AEN71073.1| sucrose synthase Sus1 [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/777 (80%), Positives = 681/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +A+ VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLANGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD AE VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT++SDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEHSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHPEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LID Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIDKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium mustelinum Species: Gossypium mustelinum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104517|gb|AEN71080.1| sucrose synthase Sus1 [Gossypium gossypioides] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE++L L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEFLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium gossypioides Species: Gossypium gossypioides Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104475|gb|AEN71059.1| sucrose synthase Sus1 [Gossypium thurberi] gi|345104521|gb|AEN71082.1| sucrose synthase Sus1 [Gossypium trilobum] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGAD+ IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADLEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium thurberi Species: Gossypium thurberi Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104489|gb|AEN71066.1| sucrose synthase Sus1 [Gossypium darwinii] | Back alignment and taxonomy information |
|---|
Score = 1291 bits (3342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/777 (80%), Positives = 681/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E F G+IP VFNVVI TPHG+FAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFFGRIPMVFNVVILTPHGHFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium darwinii Species: Gossypium darwinii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104479|gb|AEN71061.1| sucrose synthase Sus1 [Gossypium schwendimanii] | Back alignment and taxonomy information |
|---|
Score = 1291 bits (3341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/777 (80%), Positives = 682/777 (87%), Gaps = 9/777 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VLNATQEAAVSSPWVALA 65
L LLS IE G GI + QI+ +A E N +AD VL A+QEA V PWVALA
Sbjct: 28 LALLSRIEGKGKGILQHHQIILEFEAIPEENRKKLADGAFFEVLKASQEAIVLPPWVALA 87
Query: 66 LRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPH 124
+R PGVW YIRVNV + VEE++V++YL FKEE+VDG SNGNF E+DFEPF + P
Sbjct: 88 VRPRPGVWEYIRVNVHALVVEELTVAEYLHFKEELVDG-SSNGNFVLELDFEPFNSSFPR 146
Query: 125 PTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQS 184
PTLS SIG+G+EFLNRH+SAKLF+DKESM LLEFLRVH H GKNMMLN++IQ+L LQ
Sbjct: 147 PTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNALQH 206
Query: 185 SLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTL 244
LR AE+YL L P+T AEFE +FQEIGLERGWGD A+ VL MIQLLLDLL+AP+ TL
Sbjct: 207 VLRKAEEYLGTLPPETPCAEFEHRFQEIGLERGWGDTAQRVLEMIQLLLDLLEAPDPCTL 266
Query: 245 ETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 304
E FLG+IP VFNVVI TPHGYFAQD+VLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL
Sbjct: 267 EKFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL 326
Query: 305 DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPY 364
+ITPRILIITRLLPDAVGTTCGQR+EKVYGT+YSDILRVPFRTE+GIVRKWISRFEVWPY
Sbjct: 327 NITPRILIITRLLPDAVGTTCGQRLEKVYGTEYSDILRVPFRTEKGIVRKWISRFEVWPY 386
Query: 365 LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS 424
LET+TEDVA EI +ELQ KPDLIIGNYSDGNIVASLLAHKL VTQCTIAHALE TKYPDS
Sbjct: 387 LETYTEDVAHEISKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS 446
Query: 425 DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484
DI WKKL+DKYHFSCQFTADLFAMN TDFIITSTFQEIAGSKDTVGQYESHTAF+LPGLY
Sbjct: 447 DIYWKKLEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506
Query: 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK 544
RVV+GID FDPKFNIVSPGADM IYFPY EEKRRLKHFH+EIE+LLYS VEN+EHLCVL
Sbjct: 507 RVVHGIDVFDPKFNIVSPGADMEIYFPYTEEKRRLKHFHTEIEDLLYSKVENEEHLCVLN 566
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D +KPILFTMARLDRVKNLTGLVEWYGKNAKLREL NLVVVGGDRRKESKDLEE+AEMKK
Sbjct: 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEKAEMKK 626
Query: 605 MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 664
M+ LI+ Y LNGQFRWISSQMNR+RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG
Sbjct: 627 MFELIEKYNLNGQFRWISSQMNRIRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG 686
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LPTFATCNGGPAEIIVHGKSGF+IDPY GDQA ILVDFFEKCK DP HWD+ISQGGLKR
Sbjct: 687 LPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAADILVDFFEKCKKDPSHWDKISQGGLKR 746
Query: 725 IQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781
I+EKYTWKIYSERLL L+GVYGFWKH+S L+ RE RYLEMFY+L YRK ++VPLA
Sbjct: 747 IEEKYTWKIYSERLLTLTGVYGFWKHVSNLERRESRRYLEMFYALKYRKLAESVPLA 803
|
Source: Gossypium schwendimanii Species: Gossypium schwendimanii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 784 | ||||||
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.975 | 0.946 | 0.741 | 2.7e-313 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.975 | 0.946 | 0.744 | 3.6e-311 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.970 | 0.932 | 0.674 | 2.4e-282 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.947 | 0.920 | 0.648 | 4.6e-263 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.947 | 0.918 | 0.638 | 9.6e-263 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.938 | 0.781 | 0.555 | 5.2e-223 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.936 | 0.877 | 0.540 | 1.7e-215 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.608 | 0.454 | 0.271 | 5.6e-33 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.610 | 0.457 | 0.257 | 1.4e-28 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.613 | 0.461 | 0.248 | 5.9e-28 |
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3005 (1062.9 bits), Expect = 2.7e-313, P = 2.7e-313
Identities = 574/774 (74%), Positives = 645/774 (83%)
Query: 19 IERLGCGIYKRQQILSLVDA-------ESNGAAIADVLNATQEAAVSSPWVALALRTSPG 71
+E G GI ++ QI++ +A + G D+L +TQEA V PWVALA+R PG
Sbjct: 36 VEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPG 95
Query: 72 VWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNS 130
VW Y+RVN+ + VEE+ +++L FKEE+VDG K NGNF E+DFEPF A +P PTL
Sbjct: 96 VWEYLRVNLHALVVEELQPAEFLHFKEELVDGVK-NGNFTLELDFEPFNASIPRPTLHKY 154
Query: 131 IGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAE 190
IG+G++FLNRH+SAKLF+DKES+ LL+FLR+HSH GKN+ML+EKIQ+L TLQ +LR AE
Sbjct: 155 IGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAE 214
Query: 191 KYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQXXXXXXQAPESSTLETFLGK 250
+YL+ L +T Y EFE KF+EIGLERGWGDNAE VL MI+ +AP+ TLETFLG+
Sbjct: 215 EYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGR 274
Query: 251 IPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGXXXXXXX 310
+P VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQVRALE EML RIKQQG
Sbjct: 275 VPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRI 334
Query: 311 XXXXXXXXXAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTE 370
AVGTTCG+R+E+VY ++Y DILRVPFRTE+GIVRKWISRFEVWPYLET+TE
Sbjct: 335 LILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE 394
Query: 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKK 430
D A E+ +EL KPDLIIGNYSDGN+VASLLAHKL VTQCTIAHALE TKYPDSDI WKK
Sbjct: 395 DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKK 454
Query: 431 LDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGI 490
LDDKYHFSCQFTAD+FAMN TDFIITSTFQEIAGSK+TVGQYESHTAF+LPGLYRVV+GI
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 491 DAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550
D FDPKFNIVSPGADM+IYFPY EEKRRL FHSEIEELLYS VENKEHLCVLKD KPI
Sbjct: 515 DVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPI 574
Query: 551 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID 610
LFTMARLDRVKNL+GLVEWYGKN +LREL NLVVVGGDRRKESKD EE+AEMKKMY LI+
Sbjct: 575 LFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIE 634
Query: 611 TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670
YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT
Sbjct: 635 EYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 694
Query: 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730
C GGPAEIIVHGKSGFHIDPY GDQA L DFF KCK DP HWDEIS+GGL+RI+EKYT
Sbjct: 695 CKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYT 754
Query: 731 WKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784
W+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+L YR Q VPLA D+
Sbjct: 755 WQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2985 (1055.8 bits), Expect = 3.6e-311, P = 3.6e-311
Identities = 576/774 (74%), Positives = 639/774 (82%)
Query: 19 IERLGCGIYKRQQILSLVDA---ESN----GAAIADVLNATQEAAVSSPWVALALRTSPG 71
+E G GI + QI++ +A E+ G A + L + QEA V P+VALA+R PG
Sbjct: 36 VEAKGKGILQHHQIIAEFEAMPLETQKKLKGGAFFEFLRSAQEAIVLPPFVALAVRPRPG 95
Query: 72 VWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNS 130
VW Y+RVN+ + VEE+ S+YL FKEE+VDG K NGNF E+DFEPF A P PTL+
Sbjct: 96 VWEYVRVNLHDLVVEELQASEYLQFKEELVDGIK-NGNFTLELDFEPFNAAFPRPTLNKY 154
Query: 131 IGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAE 190
IG G+EFLNRH+SAKLF+DKES+ LL+FLR+HSH GK +MLN +IQ+L TLQ +LR AE
Sbjct: 155 IGDGVEFLNRHLSAKLFHDKESLHPLLKFLRLHSHEGKTLMLNNRIQNLNTLQHNLRKAE 214
Query: 191 KYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQXXXXXXQAPESSTLETFLGK 250
+YL L P+T Y+EFE KFQEIGLERGWGD AE VL MI+ +AP+ TLE FLG+
Sbjct: 215 EYLMELKPETLYSEFEHKFQEIGLERGWGDTAERVLNMIRLLLDLLEAPDPCTLENFLGR 274
Query: 251 IPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGXXXXXXX 310
IP VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQVRALE EML RIKQQG
Sbjct: 275 IPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALETEMLQRIKQQGLNITPRI 334
Query: 311 XXXXXXXXXAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTE 370
A GTTCGQR+EKVYG++Y DILRVPFRTE+GIVRKWISRFEVWPYLETFTE
Sbjct: 335 LIITRLLPDAAGTTCGQRLEKVYGSQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTE 394
Query: 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKK 430
DVA EI +ELQ KPDLIIGNYSDGN+VASLLAHKL VTQCTIAHALE TKYPDSDI WKK
Sbjct: 395 DVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKK 454
Query: 431 LDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGI 490
LD+KYHFSCQFTADL AMN TDFIITSTFQEIAGSKDTVGQYESH +F+LPGLYRVV+GI
Sbjct: 455 LDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHRSFTLPGLYRVVHGI 514
Query: 491 DAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550
D FDPKFNIVSPGADM+IYF Y EEKRRL FH EIEELLYS VEN+EHLCVLKD KPI
Sbjct: 515 DVFDPKFNIVSPGADMSIYFAYTEEKRRLTAFHLEIEELLYSDVENEEHLCVLKDKKKPI 574
Query: 551 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID 610
+FTMARLDRVKNL+GLVEWYGKN +LRELVNLVVVGGDRRKES+D EE+AEMKKMY LI+
Sbjct: 575 IFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGGDRRKESQDNEEKAEMKKMYELIE 634
Query: 611 TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670
YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT
Sbjct: 635 EYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 694
Query: 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730
CNGGPAEIIVHGKSGFHIDPY GD+A L DFF KCK DP HWD+IS GGL+RIQEKYT
Sbjct: 695 CNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCKHDPSHWDQISLGGLERIQEKYT 754
Query: 731 WKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784
W+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+L YR Q VPLA +E
Sbjct: 755 WQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRPLAQAVPLAHEE 808
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2713 (960.1 bits), Expect = 2.4e-282, P = 2.4e-282
Identities = 520/771 (67%), Positives = 607/771 (78%)
Query: 22 LGCGIYKRQQIL-------SLVDAES-NGAAIADVLNATQEAAVSSPWVALALRTSPGVW 73
LG G+ + QI+ S D E A DVL + QE V SPWVALA+R PGVW
Sbjct: 41 LGKGMLQAHQIIAEYNNAISEADREKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVW 100
Query: 74 CYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIG 132
Y+RVNV + VE ++V +YL FKE++V+ +N NF E+DFEPF A P P+LS SIG
Sbjct: 101 EYVRVNVSELAVELLTVPEYLQFKEQLVE-EGTNNNFVLELDFEPFNASFPRPSLSKSIG 159
Query: 133 HGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKY 192
+G++FLNRH+S+KLF+DKESM LL FLR H++ G MMLN++I+ L LQ +LR AE++
Sbjct: 160 NGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEH 219
Query: 193 LSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQXXXXXXQAPESSTLETFLGKIP 252
LS L+ DT Y+EF +FQE+GLE+GWGD A+ I +AP+ STLE FLG IP
Sbjct: 220 LSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLGTIP 279
Query: 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGXXXXXXXXX 312
VFNVVI +PHGYFAQ NVLGYPDTGGQVVYILDQVRA+ENEMLLRIKQQG
Sbjct: 280 MVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQQGLNITPRILI 339
Query: 313 XXXXXXXAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDV 372
A GTTCGQR+EKV GT+++ ILRVPFRTE GIVRKWISRFEVWPYLETFT+DV
Sbjct: 340 VTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDDV 399
Query: 373 ATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLD 432
A EI ELQ PDLIIGNYSDGN+VA LLAHK+ VT CTIAHALE TKYP+SD+ WKK +
Sbjct: 400 AHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFE 459
Query: 433 DKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492
D YHFSCQFT DL AMN DFIITSTFQEIAG+KDTVGQYESH AF++PGLYRVV+GID
Sbjct: 460 DHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDV 519
Query: 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILF 552
FDPKFNIVSPGADM+IYFPY E ++RL H EIEELLYS V+N EH +LKD +KPI+F
Sbjct: 520 FDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIF 579
Query: 553 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY 612
+MARLDRVKNLTGLVE YG+N +L+ELVNLVVV GD SKD EEQAE KKM+ LI+ Y
Sbjct: 580 SMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQY 639
Query: 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672
LNG RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTVVE+MTCGLPTFAT
Sbjct: 640 NLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAY 699
Query: 673 GGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732
GGPAEIIV+G SGFHIDPY+GD+A+ +LV+FFEKC+ DP HW +ISQGGL+RI+EKYTWK
Sbjct: 700 GGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWK 759
Query: 733 IYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVD 783
+YSERL+ L+GVYGFWK++S L+ RE RYLEM Y+L YR TVPLAV+
Sbjct: 760 LYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2531 (896.0 bits), Expect = 4.6e-263, P = 4.6e-263
Identities = 484/746 (64%), Positives = 582/746 (78%)
Query: 41 NGAAIADVLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEI 100
N + VL + +EA V P+VALA+R PGV Y+RVNV + V+ ++VS+YL FKEE+
Sbjct: 62 NKSPFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEEL 121
Query: 101 VDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEF 159
V+G +NG++ E+DFEPF A LP PT S+SIG+G++FLNRH+S+ +F +KESM+ LLEF
Sbjct: 122 VNGH-ANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEF 180
Query: 160 LRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWG 219
LR H H G+ MMLN++IQ++ LQ +L AE++LS L T Y+EFE + Q +G ERGWG
Sbjct: 181 LRTHKHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWG 240
Query: 220 DNAEHVLGMIQXXXXXXQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGG 279
D A+ V M+ QAP+ S LETFLG+IP VFNVVI +PHGYF Q NVLG PDTGG
Sbjct: 241 DTAQKVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGG 300
Query: 280 QVVYILDQVRALENEMLLRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRVEKVYGTKYSD 339
QVVYILDQVRALENEMLLRI++QG A GTTC QR+E+V GT+++
Sbjct: 301 QVVYILDQVRALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAH 360
Query: 340 ILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVAS 399
ILR+PFRTE+GI+RKWISRF+VWPYLETF ED + EI ELQ P+LIIGNYSDGN+VAS
Sbjct: 361 ILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVAS 420
Query: 400 LLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459
LLA KL V QC IAHALE TKYP+SDI W+ +DKYHFS QFTADL AMN DFIITST+
Sbjct: 421 LLASKLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTY 480
Query: 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRL 519
QEIAGSK+ VGQYESHTAF++PGLYRVV+GID FDPKFNIVSPGADMTIYFPY +++RRL
Sbjct: 481 QEIAGSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRL 540
Query: 520 KHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL 579
H IEELL+S +N EH+ +L D SKPI+F+MARLDRVKNLTGLVE Y KN+KLREL
Sbjct: 541 TALHESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLREL 600
Query: 580 VNLVVVGGD-RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYIC 638
NLV+VGG +S+D EE AE++KM+ LI+ Y L+G+FRWI++QMNR RNGELYRYI
Sbjct: 601 ANLVIVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIA 660
Query: 639 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATG 698
DTKG FVQPA YEAFGLTVVE+MTC LPTFATC+GGPAEII +G SGFHIDPY DQ
Sbjct: 661 DTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAA 720
Query: 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCRE 758
LV FFE C +P HW +IS+GGLKRI E+YTWK YSERLL L+GVY FWKH+SKL+ RE
Sbjct: 721 TLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRE 780
Query: 759 KNRYLEMFYSLMYRKQVQTVPLAVDE 784
RYLEMFYSL +R ++PLA DE
Sbjct: 781 TRRYLEMFYSLKFRDLANSIPLATDE 806
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2528 (895.0 bits), Expect = 9.6e-263, P = 9.6e-263
Identities = 477/747 (63%), Positives = 582/747 (77%)
Query: 40 SNGAAIADVLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEE 99
S+G ++L + EA V P+VALA+R PGVW Y+RVNV + VE+++VS+YL FKEE
Sbjct: 65 SDGP-FGEILKSAMEAIVVPPFVALAVRPRPGVWEYVRVNVFELSVEQLTVSEYLRFKEE 123
Query: 100 IVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLE 158
+VDG S+ F E+DFEPF A +P P+ S+SIG+G++FLNRH+S+ +F +K+ ++ LL+
Sbjct: 124 LVDGPNSDP-FCLELDFEPFNANVPRPSRSSSIGNGVQFLNRHLSSVMFRNKDCLEPLLD 182
Query: 159 FLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGW 218
FLRVH + G +MLN++IQ + LQ L AE ++S L+ +T ++EFE Q +G E+GW
Sbjct: 183 FLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEKGW 242
Query: 219 GDNAEHVLGMIQXXXXXXQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTG 278
GD A VL M+ QAP+ S+LE FLG +P VFNVVI +PHGYF Q NVLG PDTG
Sbjct: 243 GDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPDTG 302
Query: 279 GQVVYILDQVRALENEMLLRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRVEKVYGTKYS 338
GQVVYILDQVRALE EMLLRIK+QG A GTTC QR+E+V GT+++
Sbjct: 303 GQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTEHT 362
Query: 339 DILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVA 398
ILRVPFR+E+GI+RKWISRF+VWPYLE + +D A+EI+ ELQ PD IIGNYSDGN+VA
Sbjct: 363 HILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNLVA 422
Query: 399 SLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458
SL+AH++ VTQCTIAHALE TKYPDSDI WK D+KYHFSCQFTADL AMN DFIITST
Sbjct: 423 SLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIITST 482
Query: 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRR 518
+QEIAG+K+TVGQYESH AF+LPGLYRVV+GID FDPKFNIVSPGADMTIYFPY EE RR
Sbjct: 483 YQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEETRR 542
Query: 519 LKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 578
L H IEE+LYSP + EH+ L D SKPILF+MARLD+VKN++GLVE Y KN KLRE
Sbjct: 543 LTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRE 602
Query: 579 LVNLVVVGGDRR-KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI 637
LVNLVV+ G+ +SKD EE E++KM+ L+ YKL+GQFRWI++Q NR RNGELYRYI
Sbjct: 603 LVNLVVIAGNIDVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYI 662
Query: 638 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQAT 697
DT+GAF QPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPY +QA
Sbjct: 663 ADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAG 722
Query: 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCR 757
I+ DFFE+CK DP HW ++S GL+RI E+YTWKIYSERL+ L+GVYGFWK++SKL+ R
Sbjct: 723 NIMADFFERCKEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERR 782
Query: 758 EKNRYLEMFYSLMYRKQVQTVPLAVDE 784
E RYLEMFY L +R V+TVP D+
Sbjct: 783 ETRRYLEMFYILKFRDLVKTVPSTADD 809
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2153 (763.0 bits), Expect = 5.2e-223, P = 5.2e-223
Identities = 411/740 (55%), Positives = 530/740 (71%)
Query: 48 VLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSN 107
+L TQEAAV P+VALA R +PG W Y++VN + V+EI+ + YL KE + D S
Sbjct: 75 ILTCTQEAAVVPPFVALAARPNPGFWEYVKVNSGDLTVDEITATDYLKLKESVFDESWSK 134
Query: 108 GNFAFEVDFEPFR-ALPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHM 166
A E+DF P +LS+SIG G +++++ +S+KL + ++ LL +L +H
Sbjct: 135 DENALEIDFGAIDFTSPRLSLSSSIGKGADYISKFISSKLGGKSDKLEPLLNYLLRLNHH 194
Query: 167 GKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226
G+N+M+N+ + + LQ SL +A +S + T Y F Q+ +E+G E+GWGD AE V
Sbjct: 195 GENLMINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEKGWGDTAERVK 254
Query: 227 GMIQXXXXXXQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILD 286
+ +AP++ L+ ++P VFNVVIF+ HGYF Q +VLG PDTGGQVVYILD
Sbjct: 255 ETMIILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPDTGGQVVYILD 314
Query: 287 QVRALENEMLLRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRVEKVYGTKYSDILRVPFR 346
QVRALE E+L+RI QQG A GT C Q +E + GTK+S ILRVPF
Sbjct: 315 QVRALEEELLIRINQQGLGFKPQILVVTRLIPEARGTKCDQELEAIEGTKHSHILRVPFV 374
Query: 347 TEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLD 406
T +G++R+W+SRF+++PYLE FT+D ++I+Q L CKPDLIIGNY+DGN+VASL+A KL
Sbjct: 375 TNKGVLRQWVSRFDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLG 434
Query: 407 VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466
VTQ TIAHALE TKY DSD WK+LD KYHFSCQFTADL AMN TDFIITST+QEIAGSK
Sbjct: 435 VTQGTIAHALEKTKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSK 494
Query: 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEI 526
D GQYESHTAF++PGL RVV+GID FDPKFNI +PGAD ++YFPY E+ +R FH I
Sbjct: 495 DRPGQYESHTAFTMPGLCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKDKRFTKFHPSI 554
Query: 527 EELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG 586
+ELLY+ +N EH+ L D KPI+F+MARLD VKN+TGLVEWYGK+ +LRE+ NLVVV
Sbjct: 555 QELLYNEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVA 614
Query: 587 G--DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 644
G D K S D EE+AE+KKM+ LI+ YKL G+FRWI++Q +R RN ELYR I DTKG F
Sbjct: 615 GFFDMSK-SNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNSELYRCIADTKGVF 673
Query: 645 VQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF 704
VQPALYEAFGLTV+EAM CGLPTFAT GGPAEIIV G SGFHIDP GD++ + DFF
Sbjct: 674 VQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTKIGDFF 733
Query: 705 EKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLE 764
KC+ D +WD IS+GGLKRI E YTWKIY+E+LL + +YGFW+ +++ + K RY+E
Sbjct: 734 SKCRSDGLYWDNISKGGLKRIYECYTWKIYAEKLLKMGSLYGFWRQVNEDQKKAKKRYIE 793
Query: 765 MFYSLMYRKQVQTVPLAVDE 784
M Y+L +++ + V + D+
Sbjct: 794 MLYNLQFKQLTKKVTIPEDK 813
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2082 (738.0 bits), Expect = 1.7e-215, P = 1.7e-215
Identities = 401/742 (54%), Positives = 527/742 (71%)
Query: 45 IADVLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGR 104
+ +L TQ A V P VA A+R +PG W Y++VN + VE +S ++YL KE + D
Sbjct: 65 LGKILCFTQ-AVVIPPNVAFAVRGTPGNWQYVKVNSSNLSVEALSSTQYLKLKEFLFDEN 123
Query: 105 KSNGNFAFEVDFEPFR-ALPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVH 163
+N A EVDF LP +LS+SIG+G+ F++ + +L ND QSL+++L
Sbjct: 124 WANDENALEVDFGALDFTLPWLSLSSSIGNGLSFVSSKLGGRL-NDNP--QSLVDYLLSL 180
Query: 164 SHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAE 223
H G+ +M+NE + L+ SL +A+ +LS L DT + FE +F+E G E+GWG++A
Sbjct: 181 EHQGEKLMMNETLNTARKLEMSLILADVFLSELPKDTPFQAFELRFKECGFEKGWGESAG 240
Query: 224 HVLGMIQXXXXXXQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVY 283
V ++ QAP+ ++ F ++PR+FNVVIF+ HGYF Q +VLG PDTGGQVVY
Sbjct: 241 RVKETMRILSEILQAPDPQNIDRFFARVPRIFNVVIFSVHGYFGQTDVLGLPDTGGQVVY 300
Query: 284 ILDQVRALENEMLLRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRVEKVYGTKYSDILRV 343
ILDQV+ALE+E+L RI QG A T C Q +E ++GTKYS+ILR+
Sbjct: 301 ILDQVKALEDELLQRINSQGLNFKPQILVVTRLIPDAKKTKCNQELEPIFGTKYSNILRI 360
Query: 344 PFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH 403
PF TE GI+R+W+SRF+++PYLE FT+D T+I+ L+ KPDLIIGNY+DGN+VASL+A+
Sbjct: 361 PFVTENGILRRWVSRFDIYPYLERFTKDATTKILDILEGKPDLIIGNYTDGNLVASLMAN 420
Query: 404 KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIA 463
KL +TQ TIAHALE TKY DSDI WK+ D KYHFS QFTADL +MN DFII ST+QEIA
Sbjct: 421 KLGITQATIAHALEKTKYEDSDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIA 480
Query: 464 GSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFH 523
GSK+ GQYESH +F++PGLYRVV+GI+ FDP+FNI +PGAD +IYFP+ + RR F+
Sbjct: 481 GSKERAGQYESHMSFTVPGLYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFY 540
Query: 524 SEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLV 583
+ I+ELLYS EN EH+ L D KPI+F+MARLD VKNLTGL EWY KN +LR+LVNLV
Sbjct: 541 TSIDELLYSQSENDEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLV 600
Query: 584 VVGG--DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTK 641
+VGG D K SKD EE +E+KKM+ LI+ Y+L GQFRWI++Q +R RNGELYR I DT+
Sbjct: 601 IVGGFFDASK-SKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTR 659
Query: 642 GAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILV 701
GAFVQPA YEAFGLTV+EAM+CGL TFAT GGPAEIIV G SGFHIDP G++++ +
Sbjct: 660 GAFVQPAHYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIA 719
Query: 702 DFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNR 761
DFFEK +DP +W+ S GL+RI E YTWKIY+ +++N+ Y +W+HL+K K R
Sbjct: 720 DFFEKSGMDPDYWNMFSNEGLQRINECYTWKIYANKVINMGSTYSYWRHLNKDQKLAKQR 779
Query: 762 YLEMFYSLMYRKQVQTVPLAVD 783
Y+ FY+L YR V+T+P+ D
Sbjct: 780 YIHSFYNLQYRNLVKTIPILSD 801
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 5.6e-33, P = 5.6e-33
Identities = 140/515 (27%), Positives = 226/515 (43%)
Query: 250 KIPRVFNVVIFTPHGYFAQDNV-LGYP-DTGGQVVYILDQVRALEN-EMLLRIKQQGXXX 306
K R +V+ + HG +N+ LG DTGGQV Y+++ RAL N E + R+
Sbjct: 190 KSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVHRVDLLTRQI 249
Query: 307 XXXXXXXXXXXXXAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLE 366
+ +C G+ Y I+R+P + + K+I + +WP++
Sbjct: 250 SSPEVDYSYGEPVEM-LSCPPEGSDSCGS-Y--IIRIPCGSRD----KYIPKESLWPHIP 301
Query: 367 TFTEDVATEII---QEL--QCK------PDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415
F + I+ + L Q P +I G+Y+D VA+ LA L+V H+
Sbjct: 302 EFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGHS 361
Query: 416 LELTKYPD----SDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQ 471
L K+ I + +D Y + A+ +++ + ++TST QEI
Sbjct: 362 LGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYDG 421
Query: 472 YESHTAFSLP-GLYRVVNGIDAFDPKFNIVSPGADMTIYFPY--MEEKRRLKHFHSEIEE 528
++ L R V+ + + P+ ++ PG D + E LK
Sbjct: 422 FDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDRN 481
Query: 529 LLYSPVEN--KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG 586
+ PV E + + KP + ++R D KN+T LV+ +G+ LREL NLV++
Sbjct: 482 QIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLIL 541
Query: 587 GDRRK-ESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 645
G+R E + + LID Y L GQ + + ++YR TKG F+
Sbjct: 542 GNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAY-PKHHKQSEVPDIYRLAAKTKGVFI 600
Query: 646 QPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705
PAL E FGLT++EA GLP AT NGGP +I+ +G +DP+ DQ + D
Sbjct: 601 NPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPH--DQQA--ISDALL 656
Query: 706 KCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740
K + W E + GLK I +++W + L+
Sbjct: 657 KLVANKHLWAECRKNGLKNIH-RFSWPEHCRNYLS 690
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 134/520 (25%), Positives = 231/520 (44%)
Query: 257 VVIFTPHGYFAQDNV-LGYP-DTGGQVVYILDQVRALENEM-LLRIKQQGXXXXXXXXXX 313
+V+ + HG +N+ LG DTGGQV Y+++ RAL + + R+
Sbjct: 177 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDS 236
Query: 314 XXXXXXAVGTTCGQRVEKVYG-TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDV 372
+ +E+ G + + I+R+PF ++ K++ + +WP++ F +
Sbjct: 237 SYSEPSEMLNPIDTDIEQENGESSGAYIIRIPFGPKD----KYVPKELLWPHIPEFVDRA 292
Query: 373 ATEIIQ-------EL----QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL---EL 418
+ I+Q ++ Q P I G+Y+D +LL+ L+V H+L +L
Sbjct: 293 LSHIMQISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKL 352
Query: 419 TKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAF 478
+ ++++ Y + A+ ++ ++ +ITST QE+ ++
Sbjct: 353 EQLLKQGRPKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLER 412
Query: 479 SLPG-LYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENK 537
L + R V+ + F P+ ++ PG + P+ + E + P+ +
Sbjct: 413 KLRARMKRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADG----DDENPQTADPPIWS- 467
Query: 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDL 596
E + + KP++ +AR D KNL LV+ +G+ LREL NL ++ G+R +
Sbjct: 468 EIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSS 527
Query: 597 EEQAEMKKMYGLIDTYKLNGQFRWISS-QMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655
+ + + LID Y L GQ Q + V E+YR TKG F+ PA E FGL
Sbjct: 528 TNSSVLLSILKLIDKYDLYGQVAMPKHHQQSDVP--EIYRLAAKTKGVFINPAFIEPFGL 585
Query: 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWD 715
T++EA GLPT AT NGGP +I +G +DP+ DQ + D K D W
Sbjct: 586 TLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPH--DQQA--IADALLKLVSDRQLWG 641
Query: 716 EISQGGLKRIQEKYTW----KIYSERLLNLSGVYGFWKHL 751
Q GL I ++W K Y R+ + + W+ +
Sbjct: 642 RCRQNGLNNIH-LFSWPEHCKTYLARIASCKQRHPKWQRV 680
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 347 (127.2 bits), Expect = 5.9e-28, Sum P(2) = 5.9e-28
Identities = 129/519 (24%), Positives = 228/519 (43%)
Query: 257 VVIFTPHGYFAQDNV-LGYP-DTGGQVVYILDQVRALENEM-LLRIKQQGXXXXXXXXXX 313
+V+ + HG +N+ LG DTGGQV Y+++ RAL + + R+
Sbjct: 170 LVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDY 229
Query: 314 XXXXXXAVGTTCGQR--VEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTED 371
+ T +++ + + I+R+PF ++ K+I + +WP++ F +
Sbjct: 230 SYGEPTEMLTPRDSEDFSDEMGESSGAYIVRIPFGPKD----KYIPKELLWPHIPEFVDG 285
Query: 372 VATEIIQELQCK-----------PDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTK 420
+ I+Q P I G+Y+D +LL+ L+V H+L K
Sbjct: 286 AMSHIMQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDK 345
Query: 421 YPD----SDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHT 476
++ ++++ Y + + +++ ++ +ITST QEI ++
Sbjct: 346 LEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPIL 405
Query: 477 AFSLPG-LYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535
L + R V+ F P+ + PG + P+ + +E P
Sbjct: 406 ERKLRARIKRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDMEDTDG--NEEHPTSPDPPI 463
Query: 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESK 594
E + +S KP++ +AR D KN+T LV+ +G+ LREL NL ++ G+R +
Sbjct: 464 WAEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEM 523
Query: 595 DLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654
+ + + LID Y L GQ + + ++YR +KG F+ PA+ E FG
Sbjct: 524 SSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFG 582
Query: 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHW 714
LT++EA GLP AT NGGP +I +G +DP+ DQ + + + K D W
Sbjct: 583 LTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPH--DQQS--ISEALLKLVADKHLW 638
Query: 715 DEISQGGLKRIQEKYTW----KIYSERLLNLSGVYGFWK 749
+ Q GLK I + ++W K Y R+ + + W+
Sbjct: 639 AKCRQNGLKNIHQ-FSWPEHCKTYLSRITSFKPRHPQWQ 676
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.6738 | 0.9400 | 0.9621 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7119 | 0.9974 | 0.9762 | N/A | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.7584 | 0.9974 | 0.9714 | N/A | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7052 | 0.9821 | 0.9600 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7509 | 0.9821 | 0.9565 | N/A | no |
| P49040 | SUS1_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7537 | 0.9987 | 0.9690 | no | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.7424 | 0.9987 | 0.9714 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.6833 | 0.9821 | 0.9436 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7014 | 0.9808 | 0.9529 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.7396 | 0.9974 | 0.9714 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.6939 | 0.9948 | 0.9512 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7012 | 0.9795 | 0.9540 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7458 | 0.9821 | 0.9565 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.7247 | 0.9936 | 0.9701 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7391 | 0.9834 | 0.9542 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.6897 | 0.9821 | 0.9436 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.7496 | 0.9821 | 0.9565 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.6564 | 0.9795 | 0.9493 | N/A | no |
| Q9LXL5 | SUS4_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7679 | 0.9834 | 0.9542 | yes | no |
| P30298 | SUS2_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7117 | 0.9821 | 0.9529 | yes | no |
| P13708 | SUSY_SOYBN | 2, ., 4, ., 1, ., 1, 3 | 0.7597 | 0.9974 | 0.9714 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 784 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-126 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 3e-66 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 5e-37 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-24 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 1e-23 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-21 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 3e-18 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-16 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 7e-15 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 9e-15 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 2e-13 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 7e-13 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 3e-11 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 3e-11 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 4e-11 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 9e-11 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-09 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 5e-09 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 7e-09 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 1e-08 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-08 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-08 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 6e-08 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 1e-07 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 1e-07 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-07 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-07 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 5e-07 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 5e-07 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 6e-06 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 1e-05 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 5e-05 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-05 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 1e-04 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.001 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 0.002 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1517 bits (3931), Expect = 0.0
Identities = 560/799 (70%), Positives = 651/799 (81%), Gaps = 16/799 (2%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQIL----SLVDAESN-----GAAIAD 47
+ ++ + LS+ LLS G GI + Q++ +++D + D
Sbjct: 13 IRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGD 72
Query: 48 VLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSN 107
+L +TQEA V P+VALA+R PGVW Y+RVNV + VEE++VS+YL FKEE+VDG N
Sbjct: 73 ILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDG-SWN 131
Query: 108 GNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHM 166
NF E+DFEPF A P PTLS+SIG+G++FLNRH+S+KLF DKES++ LL+FLR H+H
Sbjct: 132 DNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPLLDFLRAHNHK 191
Query: 167 GKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226
G+ +MLN++IQ L LQS+LR AE+YLS L DT Y+EFE +FQE+GLE+GWGD AE VL
Sbjct: 192 GETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVL 251
Query: 227 GMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILD 286
I LLLDLLQAP+ STLE FLG+IP VFNVVIF+PHGYF Q NVLG PDTGGQVVYILD
Sbjct: 252 ETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILD 311
Query: 287 QVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFR 346
QVRALENEMLLRIKQQGLDI P+ILI+TRL+PDA GTTC QR+EKV GT++S ILRVPFR
Sbjct: 312 QVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFR 371
Query: 347 TEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLD 406
TE+GI+RKWISRF+VWPYLETF ED A+EI+ ELQ KPDLIIGNYSDGN+VASLLAHKL
Sbjct: 372 TEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLG 431
Query: 407 VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466
VTQCTIAHALE TKYPDSDI WKK DDKYHFSCQFTADL AMN DFIITST+QEIAGSK
Sbjct: 432 VTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSK 491
Query: 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEI 526
DTVGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGADM+IYFPY E+++RL H I
Sbjct: 492 DTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSI 551
Query: 527 EELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG 586
EELLYSP +N EH+ LKD KPI+F+MARLDRVKNLTGLVEWYGKN +LRELVNLVVVG
Sbjct: 552 EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVG 611
Query: 587 GD-RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 645
G +SKD EE AE+KKM+ LI+ Y L GQFRWI++Q NRVRNGELYRYI DTKGAFV
Sbjct: 612 GFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFV 671
Query: 646 QPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705
QPALYEAFGLTVVEAMTCGLPTFATC GGPAEIIV G SGFHIDPY GD+A + DFFE
Sbjct: 672 QPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFE 731
Query: 706 KCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEM 765
KCK DP +W++IS GL+RI E YTWKIY+ERLL L GVYGFWK++SKL+ RE RYLEM
Sbjct: 732 KCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEM 791
Query: 766 FYSLMYRKQVQTVPLAVDE 784
FY+L +R+ +TVPLAVD+
Sbjct: 792 FYNLKFRELAKTVPLAVDD 810
|
Length = 815 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 1318 bits (3412), Expect = 0.0
Identities = 517/781 (66%), Positives = 617/781 (79%), Gaps = 13/781 (1%)
Query: 13 LTLLSSIERLGCGIYKRQQIL-----SLVDAESN----GAAIADVLNATQEAAVSSPWVA 63
LLS G R Q+L DA+ + + ++ +TQEA V PWVA
Sbjct: 5 RQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESPLGKLIFSTQEAIVLPPWVA 64
Query: 64 LALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPF-RAL 122
LA+R GVW Y+RVNV+ + VEE+++S+YL FKE++V+G +N E+DFEPF +
Sbjct: 65 LAVRPRIGVWEYVRVNVEELSVEELTISEYLDFKEQLVNGH-ANDPNVLELDFEPFNASF 123
Query: 123 PHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTL 182
P P+ S SIG+G++FLNRH+S+KLF D ESM+ LL FLRVH++ G +M+N++IQ + L
Sbjct: 124 PRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRIQSVSHL 183
Query: 183 QSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESS 242
QS LR AE++LS L PDT Y+EFE + QE+G E GWGD A+ VL + LL DLL+AP+ S
Sbjct: 184 QSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPS 243
Query: 243 TLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQ 302
LE FLG+IP VFNVVI +PHGYF Q+NVLG PDTGGQVVYILDQVRALENEML RIK Q
Sbjct: 244 VLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQ 303
Query: 303 GLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIV-RKWISRFEV 361
GL+ITP+ILI+TRL+PDA GTTC QR+EKVYGT+++ ILRVPFRTE GI+ R WISRFE+
Sbjct: 304 GLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEI 363
Query: 362 WPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKY 421
WPYLETF ED EI+ ELQ KPDLIIGNYSDGN+VASLLA KL VTQCTIAHALE TKY
Sbjct: 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKY 423
Query: 422 PDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLP 481
PDSDI W++ +DKYHFSCQFTADL AMN DFIITST+QEIAG+KD+VGQYESH AF++P
Sbjct: 424 PDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMP 483
Query: 482 GLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC 541
GLYRVV+GID FDPKFNIVSPGAD +IYFPY ++++RL + H EIEELL+S +N EH
Sbjct: 484 GLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYG 543
Query: 542 VLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQA 600
LKD +KPI+F+MARLDRVKNLTGLVE YG++ KLRELVNLVVV G KESKD EEQA
Sbjct: 544 YLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQA 603
Query: 601 EMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 660
E++KM+ LID Y+L+GQ RWI +Q+NRVRNGELYRYI DTKG FVQPALYEAFGLTV+EA
Sbjct: 604 EIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEA 663
Query: 661 MTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQG 720
MTCGLPTFAT GGP EII G SGFHIDPY G++A +VDFFEKC DP +W +ISQG
Sbjct: 664 MTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723
Query: 721 GLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPL 780
GL+RI EKYTWKIYSERLL L+G+YGFWK +SKL+ E RYLEMFY L YR + VPL
Sbjct: 724 GLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPL 783
Query: 781 A 781
A
Sbjct: 784 A 784
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 890 bits (2300), Expect = 0.0
Identities = 385/540 (71%), Positives = 444/540 (82%), Gaps = 15/540 (2%)
Query: 7 ETLSKS----LTLLSSIERLGCGIYKRQQILSLVDA---------ESNGAAIADVLNATQ 53
+TLS L LLS I G GI + Q+++ +A + A +V+ + Q
Sbjct: 12 DTLSAHRNELLALLSRIVAQGKGILQPHQLIAEYEAILGEDRAKLDDKNGAFGEVIKSAQ 71
Query: 54 EAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFE 113
EA V PWVALA+R PGVW Y+RVNV + VEE+SV +YL FKEE+VDG SN NF E
Sbjct: 72 EAIVLPPWVALAVRPRPGVWEYVRVNVHELVVEELSVPEYLQFKEELVDG-SSNDNFVLE 130
Query: 114 VDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGKNMML 172
+DFEPF A P PTLS SIG+G++FLNRH+S+K+F+DK+S+ LLEFLR+H++ GK +ML
Sbjct: 131 LDFEPFNASFPRPTLSKSIGNGVQFLNRHLSSKMFHDKDSLHPLLEFLRLHTYKGKTLML 190
Query: 173 NEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLL 232
N++IQ++ LQS+LR AE YLS L PDT Y+EFE KFQEIG ERGWGD AE VL M+ LL
Sbjct: 191 NDRIQNISALQSALRKAEDYLSTLPPDTPYSEFEHKFQEIGFERGWGDTAERVLEMMHLL 250
Query: 233 LDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALE 292
LDLL+AP+ STLETFLG+IP VFNVVI +PHGYFAQ NVLGYPDTGGQVVYILDQVRALE
Sbjct: 251 LDLLEAPDPSTLETFLGRIPMVFNVVILSPHGYFAQANVLGYPDTGGQVVYILDQVRALE 310
Query: 293 NEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIV 352
+EML+RIKQQGLDITPRILI+TRLLPDAVGTTC QR+EKV+GT+++ ILRVPFRTE+GI+
Sbjct: 311 SEMLVRIKQQGLDITPRILIVTRLLPDAVGTTCNQRLEKVFGTEHTHILRVPFRTEKGIL 370
Query: 353 RKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI 412
RKWISRFEVWPYLETF EDVA+EI ELQ KPDLIIGNYSDGN+VASLLAHKL VTQCTI
Sbjct: 371 RKWISRFEVWPYLETFAEDVASEIAAELQAKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 430
Query: 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQY 472
AHALE TKYPDSDI WKK + KYHFSCQFTADL AMN DFIITSTFQEIAGSKDTVGQY
Sbjct: 431 AHALEKTKYPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEIAGSKDTVGQY 490
Query: 473 ESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532
ESHTAF+LPGLYRVV+GID FDPKFNIVSPGADMTIYFPY E+++RL H EIEELLYS
Sbjct: 491 ESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYTEKEKRLTALHPEIEELLYS 550
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 383 bits (986), Expect = e-126
Identities = 140/485 (28%), Positives = 202/485 (41%), Gaps = 89/485 (18%)
Query: 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITR 315
+ + + HG G DTGGQ VY+L+ RAL + G + I TR
Sbjct: 1 RIALISLHGSPLAQP--GGADTGGQNVYVLELARAL--------ARLG----HEVDIFTR 46
Query: 316 LLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATE 375
+ DA V ++RVP E + ++ E+WPYL+ F +D+
Sbjct: 47 RIDDA-------LPPIVELAPGVRVVRVPAGPAEYLPKE-----ELWPYLDEFADDLLRF 94
Query: 376 IIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKY 435
+ +E +PDLI +Y D +VA LLA +L + H+L K D Y
Sbjct: 95 LRREGG-RPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGA-----ADTY 148
Query: 436 HFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495
+ + A+ + D +I ST QE G Y
Sbjct: 149 EPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRR-------------------- 188
Query: 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMA 555
+V PG D+ + PY + R L+D KP + +
Sbjct: 189 -IRVVPPGVDLERFTPYGRAEARRARL--------------------LRDPDKPRILAVG 227
Query: 556 RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYGLIDTYKL 614
RLD K + L+ Y + +LRE NLV+VGG R + D EE E+ + G+ID
Sbjct: 228 RLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDF 287
Query: 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG 674
G+ ++R LYR FV PALYE FGLT +EAM CGLP AT GG
Sbjct: 288 PGR-------VSREDLPALYRA----ADVFVNPALYEPFGLTALEAMACGLPVVATAVGG 336
Query: 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734
P +I+V G +G +DP + L DP +S+ GL+R + +YTW+
Sbjct: 337 PRDIVVDGVTGLLVDPRDPEALAAALRRLLT----DPALRRRLSRAGLRRARARYTWERV 392
Query: 735 SERLL 739
+ RLL
Sbjct: 393 AARLL 397
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-66
Identities = 137/492 (27%), Positives = 234/492 (47%), Gaps = 68/492 (13%)
Query: 257 VVIFTPHGYFAQDNV-LGY-PDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIIT 314
+++ + HG ++ LG DTGGQ Y+L+ RAL ++Q + ++T
Sbjct: 3 LLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRS--EVEQ--------VDLVT 52
Query: 315 RLLPDA-VGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVA 373
RL+ DA V Q +E++ + I+R+PF R+++ + +WPYL+ D
Sbjct: 53 RLIKDAKVSPDYAQPIERI-APG-ARIVRLPFGP-----RRYLRKELLWPYLDELA-DNL 104
Query: 374 TEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL---ELTKYPDSDINWKK 430
+ +++ PDLI +Y+D V + L+ L V H+L + + + + ++
Sbjct: 105 LQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQ 164
Query: 431 LDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGI 490
++ +Y+ S + A+ + +ITST QEI QY LY
Sbjct: 165 IEKQYNISRRIEAEEETLAHASLVITSTHQEI------EEQY---------ALY------ 203
Query: 491 DAFDP-KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKP 549
D++ P + ++ PG D++ ++P + + + L KD KP
Sbjct: 204 DSYQPERMQVIPPGVDLSRFYP-PQSSEETSEIDNLLAPFL-------------KDPEKP 249
Query: 550 ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE--MKKMYG 607
+ ++R DR KN+ LVE YG++ KL+E+ NLV+V G R + + +E Q ++K+
Sbjct: 250 PILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCR-DDIRKMESQQREVLQKVLL 308
Query: 608 LIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 667
LID Y L G+ ELYR ++G FV PAL E FGLT++EA CGLP
Sbjct: 309 LIDRYDLYGKVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPI 367
Query: 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE 727
AT +GGP +II + ++G +D + + E D W S+ G++ ++
Sbjct: 368 VATDDGGPRDIIANCRNGLLVDVLDLEA----IASALEDALSDSSQWQLWSRNGIEGVRR 423
Query: 728 KYTWKIYSERLL 739
Y+W + E+ L
Sbjct: 424 HYSWDAHVEKYL 435
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 5e-37
Identities = 144/532 (27%), Positives = 230/532 (43%), Gaps = 103/532 (19%)
Query: 257 VVIFTPHGYFAQDNV-LGY-PDTGGQVVYILDQVRALENEMLLRIKQQGLDITP---RIL 311
+V+ + HG +N+ LG DTGGQV Y+++ RAL + P R+
Sbjct: 172 IVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGS-------------MPGVYRVD 218
Query: 312 IITRLL--PDAVGTTCGQRVEKVYGTKYSD------------ILRVPFRTEEGIVRKWIS 357
++TR + PD V + G+ E + + I+R+PF G K+I
Sbjct: 219 LLTRQVSSPD-VDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPF----GPRDKYIP 273
Query: 358 RFEVWPYLETFTEDVATEIIQ-------ELQCK----PDLIIGNYSDGNIVASLLAHKLD 406
+ E+WPY+ F + + I+ ++ P +I G+Y+D A+LL+ L+
Sbjct: 274 KEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALN 333
Query: 407 VTQCTIAHAL------ELTK---YPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457
V H+L +L K +IN Y + A+ +++ ++ +ITS
Sbjct: 334 VPMVLTGHSLGRDKLEQLLKQGRMSKEEIN-----STYKIMRRIEAEELSLDASEIVITS 388
Query: 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRV--------VNGIDAFDPKFNIVSPGADMTIY 509
T QEI Q+ + F L R V+ F P+ ++ PG + +
Sbjct: 389 TRQEIEE------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHI 441
Query: 510 FPYMEEKRRLKHFHSEIEELLYSPVEN-----KEHLCVLKDSSKPILFTMARLDRVKNLT 564
P+ + E E P + E + + KP++ +AR D KN+T
Sbjct: 442 VPHDGD------MDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNIT 495
Query: 565 GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMK-----KMYGLIDTYKLNGQFR 619
LV+ +G+ LREL NL ++ G+R D++E + + LID Y L GQ
Sbjct: 496 TLVKAFGECRPLRELANLTLIMGNR----DDIDEMSSGSSSVLTSVLKLIDKYDLYGQVA 551
Query: 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII 679
+ + ++YR TKG F+ PA E FGLT++EA GLP AT NGGP +I
Sbjct: 552 Y-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH 610
Query: 680 VHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTW 731
+G +DP+ L+ K D W E Q GLK I ++W
Sbjct: 611 RVLDNGLLVDPHDQQAIADALL----KLVADKQLWAECRQNGLKNIH-LFSW 657
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-24
Identities = 89/474 (18%), Positives = 150/474 (31%), Gaps = 117/474 (24%)
Query: 274 YPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333
P GG ++L+ RAL +G ++T ++T
Sbjct: 10 PPSVGGAERHVLELARAL--------AARGHEVT----VLTPGDGGLP------------ 45
Query: 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSD 393
GIV L + + D++ +
Sbjct: 46 ----------DEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWL 95
Query: 394 GNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDF 453
+ A+L A L + H LE N L K + + A+ R D
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLE----FGRPGNELGLLLKLARALER----RALRRADR 147
Query: 454 IITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYM 513
II V + T L L V K ++ G D + P
Sbjct: 148 IIA------------VSEA---TREELRELGGV------PPEKITVIPNGVDTERFRPAP 186
Query: 514 EEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE-WYGK 572
RR +P++ + RL K + L+E
Sbjct: 187 RAARRRL----------------------GIPEDEPVILFVGRLVPRKGVDLLLEAL--- 221
Query: 573 NAKLRELVN---LVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVR 629
AKLR+ LV+VG + E++ L L + ++ V
Sbjct: 222 -AKLRKEYPDVRLVIVGDG--------PLREELEA---LAAELGLGDRVTFLG----FVP 265
Query: 630 NGELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFH 687
+ +L D FV P+LYE FGL ++EAM GLP A+ GG E++ G++G
Sbjct: 266 DEDLPALYAAAD---VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLL 322
Query: 688 IDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
+ P + ++ + DP + + +R+ E+++W + R +
Sbjct: 323 VPPGDPEALAEAILRLLD----DPELRRRLGEAARERVAERFSWDRVAARTEEV 372
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 1e-23
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMY 606
KPI+ + RL K L L+E + + + LV+VG G+ K+ K L +
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLG----- 56
Query: 607 GLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 666
L ++ + ELYR I D FV P+ YE FGL ++EAM G+P
Sbjct: 57 -------LEDNVIFVG-FVPDEDLIELYR-IAD---LFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 667 TFATCNGGPAEIIVHGKSGFHIDPY 691
AT GGPAEI+ G++G +DP
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPG 129
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 96.9 bits (240), Expect = 2e-21
Identities = 65/278 (23%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 475 HTAFSLPGLYRVVNGIDAFDPK-----FNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529
H L + + + AD I ++ +
Sbjct: 117 HGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPNKIVV 176
Query: 530 LYSPVEN----KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV 585
+ + ++ + +L + K ++ + RLD K L L+E K K + LV+V
Sbjct: 177 IPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV 236
Query: 586 GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGA 643
G + EE ++ K GL D K G V + EL + D
Sbjct: 237 GDG----PERREELEKLAKKLGLEDNVKFLG----------YVPDEELAELLASAD---V 279
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703
FV P+L E FGL ++EAM G P A+ GG E++ G++G + P ++ L D
Sbjct: 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEE----LADA 335
Query: 704 FEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
E+ DP +E+ + +R++E+++W+ +E+LL L
Sbjct: 336 LEQLLEDPELREELGEAARERVEEEFSWERIAEQLLEL 373
|
Length = 381 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 526 IEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV 585
++ +SP + E + K ++ + RL K + L+E + K R V+LV+V
Sbjct: 180 VDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIV 239
Query: 586 GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGA 643
G + LE A GL D G V + E+ Y D
Sbjct: 240 GDG--PLREALEALA---AELGLEDRVTFLG----------AVPHEEVPAYYAAAD---V 281
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703
FV P+L E FGL ++EAM CGLP AT GG EII G++G + P + ++
Sbjct: 282 FVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRL 341
Query: 704 FEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
W + + +R+ E+++W+ +ERLL L
Sbjct: 342 LAD------PWLRLGRAARRRVAERFSWENVAERLLEL 373
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 24/153 (15%)
Query: 537 KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKD 595
+E L + P++ + RL K L+ + K LV++G G R+E
Sbjct: 178 EEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREE--- 234
Query: 596 LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQPALYEAF 653
LE L L + ++ Q N Y Y+ D FV + YE F
Sbjct: 235 LEA---------LAKELGLADRVHFLGFQSNP------YPYLKAAD---LFVLSSRYEGF 276
Query: 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF 686
++EAM G P AT GP EI+ G++G
Sbjct: 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGL 309
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 7e-15
Identities = 55/234 (23%), Positives = 88/234 (37%), Gaps = 30/234 (12%)
Query: 509 YFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE 568
Y +K ++ P E L L +P + ++ KNL L+E
Sbjct: 158 YLGVPPDKIV--VIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLE 215
Query: 569 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628
+ + LV+VG + L + L + R++ V
Sbjct: 216 AFARLPAKGPDPKLVIVGKRGWLNEELLA----------RLRELGLGDRVRFL----GYV 261
Query: 629 RNGELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP-AEIIVHGKSG 685
+ EL AFV P+LYE FGL V+EAM CG P A N E+ G +
Sbjct: 262 SDEELAALYRGAR---AFVFPSLYEGFGLPVLEAMACGTPVIA-SNISSLPEVA--GDAA 315
Query: 686 FHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739
+ DP + + E DP +E+ + GL R + +++W+ + R L
Sbjct: 316 LYFDPLDPEALAAAIERLLE----DPALREELRERGLARAK-RFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 9e-15
Identities = 45/168 (26%), Positives = 63/168 (37%), Gaps = 19/168 (11%)
Query: 521 HFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV 580
H LL + L + + RL K L L+E + + +
Sbjct: 81 TVHGVNRSLLEGVPLSLLALSI----GLADKVFVGRLAPEKGLDDLIEAFALLKERGPDL 136
Query: 581 NLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT 640
LV+ G +E LEE L + ++ EL +
Sbjct: 137 KLVIAGDGPERE--YLEELLAALL---------LLDRVIFLGGL----DPEELLALLLAA 181
Query: 641 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688
FV P+L E FGL V+EAM CGLP AT GGP EI+ G +G +
Sbjct: 182 ADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Query: 505 DMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLK----DSSKPILFTMARLDRV 560
D+ Y+P ++ ++ + ++ I+ Y P + VL D S+P + + R+ R
Sbjct: 158 DILKYYPDLDPEK-VHVIYNGIDTKEYKPDDGNV---VLDRYGIDRSRPYILFVGRITRQ 213
Query: 561 KNLTGLVEWYGKNAK-LRELVNLVVVGGDRRKESKDLEEQA-EMKKMYGLIDTYKLNGQF 618
K + L+ + + V +V+ G + D E A E+++ L+D +
Sbjct: 214 KGVPHLL----DAVHYIPKDVQVVLCAG-----APDTPEVAEEVRQAVALLDRNR--TGI 262
Query: 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEI 678
WI+ + + EL + FV P++YE G+ +EAM CG P A+ GG E+
Sbjct: 263 IWINKMLPKEELVELLSN-AE---VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEV 318
Query: 679 IVHGKSGFHIDPYKGDQATGI---LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735
+V G++GF + P A G L DP ++ G KR +E+++W +
Sbjct: 319 VVDGETGFLV-PPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIA 377
Query: 736 ERLLNL 741
++ + +
Sbjct: 378 KKTVEM 383
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 7e-13
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 528 ELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVN---LV 583
++ +P+ SK IL + RL K L+E W AK+ + L
Sbjct: 159 VVIPNPLPFPPEEPSSDLKSKRILA-VGRLVPQKGFDLLIEAW----AKIAKKHPDWKLR 213
Query: 584 VVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRN-GELYRYICDTK 641
+VG G R+ + L I L + + +N E Y K
Sbjct: 214 IVGDGPEREALEAL------------IKELGLEDRVIL----LGFTKNIEEYYA-----K 252
Query: 642 GA-FVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPY 691
+ FV + +E F + ++EAM GLP + C GP+EII G +G +
Sbjct: 253 ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNG 304
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-11
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYK-GDQATGILVD 702
FV P+L E F T +EA+ CG P A GG +I+ HG +G+ P D A GI
Sbjct: 268 FVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGI--- 324
Query: 703 FFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
E DP +E+ + + + ++ ++ ++R L+L
Sbjct: 325 --EWLLADPDEREELGEAARELAENEFDSRVQAKRYLSL 361
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-11
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVD 702
FV P+ E FGL V+EAM GLP A GGPA+I+ G++G ++P + L
Sbjct: 269 VFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA 328
Query: 703 FFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739
DP ++ E+ +W+ + + LL
Sbjct: 329 LLA----DPELRRRMAARARAEA-ERRSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 4e-11
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 514 EEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573
++K+ + S ++ +SP P+ +ARL + K + L+E
Sbjct: 160 KKKKTVLIPGSGVDLDRFSPSPEP------IPEDDPVFLFVARLLKDKGIDELLE----- 208
Query: 574 A--KLREL---VNLVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627
A L+ V L++VG GD + LE I+ L G+ ++ + +
Sbjct: 209 AARILKAKGPNVRLLLVGDGDEENPAAILE-----------IEKLGLEGRVEFLGFRDD- 256
Query: 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFH 687
V EL D FV P+ E ++EAM G P AT G E ++ G +GF
Sbjct: 257 VP--ELLA-AAD---VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFL 310
Query: 688 IDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740
+ P GD L D E+ DP + Q KR +E++ +I ++LL
Sbjct: 311 VPP--GDAEA--LADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLLE 359
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 9e-11
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 532 SPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK---NAKLRELVNLVVVGG- 587
S E+ + ++ S K ++ R +R KN+ +E + + V LV+ GG
Sbjct: 195 STSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGY 254
Query: 588 -DRRKESKD-LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 645
R E+ + LEE + + L++ Q ++ S + + L
Sbjct: 255 DPRVAENVEYLEELQRLAEELLLLED-----QVIFLPSISDSQKE-LLLS-SARA----- 302
Query: 646 QPALY----EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILV 701
LY E FG+ +EAM G P A +GGP E +V G++GF +P + A +L
Sbjct: 303 --LLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAML- 359
Query: 702 DFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738
DP D + G KR++EK++ + ++ERL
Sbjct: 360 KLAN----DPDLADRMGAAGRKRVKEKFSTEAFAERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 20/194 (10%)
Query: 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMY 606
K I+ + RL K L L+E + K A+ +LV+ G D + +AE+K+
Sbjct: 202 DKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPD------EGGYRAELKQ-- 253
Query: 607 GLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 666
+ L + + + L D FV P+ E FG+ V EA+ CG P
Sbjct: 254 -IAAALGLEDRVTFTGMLYGEDKAAALAD--AD---LFVLPSHSENFGIVVAEALACGTP 307
Query: 667 TFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQ 726
T + P + ++ G+ +D A + E P + + G ++
Sbjct: 308 VVTT-DKVPWQELIEYGCGWVVDDDVDALAAALR-RALE----LPQRLKAMGENGRALVE 361
Query: 727 EKYTWKIYSERLLN 740
E+++W +++LL
Sbjct: 362 ERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 3e-09
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 31/202 (15%)
Query: 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEM 602
+K+ + ++ + RL K+ L++ + K + L++ G D +A +
Sbjct: 184 VKNDTF-VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAG--------DGPLRATL 234
Query: 603 KKM---YGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVE 659
+++ GL + KL G I++ N D FV + +E FGL V E
Sbjct: 235 ERLIKALGLSNRVKLLGLRDDIAAYYN----------AADL---FVLSSAWEGFGLVVAE 281
Query: 660 AMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQ 719
AM C LP AT GG E++ G SG I P +A L + ++ G +I
Sbjct: 282 AMACELPVVATDAGGVREVV--GDSGL-IVPISDPEA---LANKIDEILKMSGEERDIIG 335
Query: 720 GGLKRIQEKYTWKIYSERLLNL 741
+RI +K++ ++ L L
Sbjct: 336 ARRERIVKKFSINSIVQQWLTL 357
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-09
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 27/186 (14%)
Query: 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMY 606
+P+L + RL + KN+ L+ + + K V LV+VG G R+E LEE A +
Sbjct: 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREE---LEELA---REL 255
Query: 607 GLIDTYKLNGQFRWISSQMNRVRNGELYRY--ICDTKGAFVQPALYEAFGLTVVEAMTCG 664
GL D G V EL Y D FV + E GL ++EAM G
Sbjct: 256 GLADRVIFTG----------FVPREELPDYYKAAD---LFVFASTTETQGLVLLEAMAAG 302
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724
LP A G +++ G++GF P L + + DP +S+ +
Sbjct: 303 LPVVAVDAPGLPDLVADGENGFLFPPGDEA-----LAEALLRLLQDPELRRRLSKNAEES 357
Query: 725 IQEKYT 730
++
Sbjct: 358 AEKFSF 363
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 7e-09
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703
F+ P+ E+FGL +EAM CG+P A+ GG E++ HG++GF +D + +
Sbjct: 274 FLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSL 333
Query: 704 FEKCKVDPGHWDEISQGGLKRIQEKY 729
E D W E S+ R E++
Sbjct: 334 LE----DDELWQEFSRAARNRAAERF 355
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 1e-08
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF 686
E FGL ++EAM CG P A G E++ G +GF
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGF 290
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 592 ESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 651
+ E+ E+ + GL D L G R + + + + E
Sbjct: 243 YGDEEEKLKELIEELGLEDYVFLKGYTRDLDE--------VYQKA-----QLSLLTSQSE 289
Query: 652 AFGLTVVEAMTCGLP--TFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKV 709
FGL+++EA++ GLP ++ N GP+EII G++G+ + + +++
Sbjct: 290 GFGLSLMEALSHGLPVISYDV-NYGPSEIIEDGENGYLVPKGDIEALAEAIIELLN---- 344
Query: 710 DPGHWDEISQGGLKRIQEKYT 730
DP + S+ + E+Y+
Sbjct: 345 DPKLLQKFSEAAYE-NAERYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 48/182 (26%)
Query: 574 AKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS-----SQMNR 627
A+ V LV++G G + L GL G M R
Sbjct: 214 ARRVPEVRLVIIGDGPLLAALEALARA------LGLGGRVTFLG---AQPHAEVRELMRR 264
Query: 628 VRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681
R F+QP++ E + ++EA G+P AT +GG E +
Sbjct: 265 AR-------------IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED 311
Query: 682 GKSGFHIDPYKGD-----QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736
G++G + GD A G L+ DP + G +R++E++ + +
Sbjct: 312 GETGLLVPE--GDVAALAAALGRLLA-------DPDLRARMGAAGRRRVEERFDLRRQTA 362
Query: 737 RL 738
+L
Sbjct: 363 KL 364
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703
FV P+L E T++EAM GLP AT GG E++ HG +G + P GD L
Sbjct: 276 FVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPP--GDAVA--LARA 331
Query: 704 FEKCKVDPGHWDEISQGGLKRIQEKYTW 731
+ DP G R +++++
Sbjct: 332 LQPYVSDPAARRAHGAAGRARAEQQFSI 359
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 1e-07
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF 686
RV + EL + AF+ PA E FG+ VEAM G P A GG E ++ G +G
Sbjct: 249 RVSDEELRDLYARAR-AFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGI 306
Query: 687 HIDPYKGDQATGIL---VDFFEK 706
+ Q L V+ FEK
Sbjct: 307 LFEE----QTVESLAAAVERFEK 325
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 1e-07
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 650 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP 690
E F L + EA+ G+P A+ GG AE++ G +G P
Sbjct: 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPP 313
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 537 KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD-RRKESKD 595
+ K KP++ RL R K +E + K V+L++VG R+
Sbjct: 176 AREWPLPKG--KPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYA 233
Query: 596 LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFG 654
+ LI L + ++ + + Y + D A +P EAFG
Sbjct: 234 ELLE--------LIKRLGLQDRVTFVGHC-SDMP--AAYA-LADIVVSASTEP---EAFG 278
Query: 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP 690
T VEA G P A+ +GG E + G++G + P
Sbjct: 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPP 314
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-07
Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 21/143 (14%)
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMK 603
++ +ARL K+ L+ K L++VG G R + L +
Sbjct: 190 PEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE--- 246
Query: 604 KMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC 663
GL D L G+ R L D FV +L E F ++EAM C
Sbjct: 247 --LGLEDKVILLGE---------RSDVPALLN-ALD---VFVLSSLSEGFPNVLLEAMAC 291
Query: 664 GLPTFATCNGGPAEIIVHGKSGF 686
GLP AT G AE++ G +GF
Sbjct: 292 GLPVVATDVGDNAELV--GDTGF 312
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 5e-07
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVD 710
E+FGL +EAM CG+P A+ GG E++ HG +GF D + + E D
Sbjct: 283 ESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLLE----D 338
Query: 711 PGHWDEISQGGLKRIQEKY 729
S +R +E++
Sbjct: 339 EELLQRFSAAARERAKERF 357
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 5e-07
Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 60/259 (23%)
Query: 496 KFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTM 554
K ++ G D IY +E K+ K + K ILF +
Sbjct: 194 KIVVIYNGLTDEAIYLSEVERKKLRKKLG-------------------FSEDEKIILF-V 233
Query: 555 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMY------G 607
RLD +K + L+E + K LV+VG GD S+ L E KK++ G
Sbjct: 234 GRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDY---SRYL---QECKKIWSKITFTG 287
Query: 608 LIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 667
+D KL ELY+ I D V P+ +E +E M GLP
Sbjct: 288 KLDKEKLY----------------ELYQ-IADVG---VLPSFHEQCSYVAIEMMMHGLPL 327
Query: 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQA-----TGILVDFFEKCKVDPGHWDEISQGGL 722
T + G +E+I G +G+ I P K + LV K ++ +
Sbjct: 328 IGTTSTGLSEMIEDGLNGYKI-PIKEYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNAR 386
Query: 723 KRIQEKYTWKIYSERLLNL 741
+R EKY+ ++ E + +L
Sbjct: 387 RRYLEKYSLEVMRENMKSL 405
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 6e-06
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-------GDRRKESKDLE 597
+ +L R+ K + L++ + K A + LVVVG G++ K +
Sbjct: 190 SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249
Query: 598 EQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 657
E A+ L GQ +M+ Y + D V + EAF +
Sbjct: 250 EAAKRIGD----RCIMLGGQ---PPEKMHN------YYPLADL--VVVPSQVEEAFCMVA 294
Query: 658 VEAMTCGLPTFATCNGGPAEIIVHGKSGFHI-DPYKGDQATGILVDFFEKCKVDPGHWDE 716
VEAM G P A+ GG E ++ G +G+H+ +P D I+ D + DP +
Sbjct: 295 VEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDS---IISD-INRTLADP-ELTQ 349
Query: 717 ISQGGLKRIQEKYTWKIYSER 737
I++ + KY+W+ ++R
Sbjct: 350 IAEQAKDFVFSKYSWEGVTQR 370
|
Length = 380 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-05
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 657 VVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDE 716
+ E M G P A+ +G AE++ +G + P + L + DP E
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEA----LAAAILELLDDPEERAE 371
Query: 717 ISQGGLKRIQEKYTWKIYSERLL 739
+ + G + ++EK++ + +ERLL
Sbjct: 372 MGENGRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-05
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 644 FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII---VHGKSGFHIDPYKGDQATGIL 700
FV P+ E G V+EAM G+P A GG +II GK+GF P D L
Sbjct: 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKL 394
Query: 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSK 753
E DP + + + + EK+ W+ + +L N W K
Sbjct: 395 ----ETLLADPELRERMGAAAREEV-EKWDWRAATRKLRNEQYSAAIWFWRKK 442
|
Length = 465 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 7e-05
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 34/198 (17%)
Query: 551 LFTMARLDRVKNLTGLVEWYGKNAKLRE---LVNLVVVG-GDRRKESKDLEEQAEMKKMY 606
+ ++ RL K L L+E A L++ L +VG G R E + L +
Sbjct: 182 ILSVGRLVEKKGLDYLLEAL---ALLKDRGIDFRLDIVGDGPLRDELEALIAEL------ 232
Query: 607 GLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEA 660
GL D L G S + VR EL R D FV P++ E + ++EA
Sbjct: 233 GLEDRVTLLG---AKSQE--EVR--ELLRA-AD---LFVLPSVTAADGDREGLPVVLMEA 281
Query: 661 MTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQG 720
M GLP +T G E++ G++G + P GD L D E+ DP E+ +
Sbjct: 282 MAMGLPVISTDVSGIPELVEDGETGLLVPP--GDPEA--LADAIERLLDDPELRREMGEA 337
Query: 721 GLKRIQEKYTWKIYSERL 738
G R++E++ + + RL
Sbjct: 338 GRARVEEEFDIRKQAARL 355
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 574 AKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE 632
A L + LV+VG G +LE A GL+D + G R+ + E
Sbjct: 214 AALPDAP-LVIVGEGP---LEAELEALAAA---LGLLDRVRFLG----------RLDDEE 256
Query: 633 LYRY--ICDTKGAFVQP--ALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFH 687
CD FV P EAFG+ ++EAM G P +T G + + +HG +G
Sbjct: 257 KAALLAACD---VFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLV 313
Query: 688 IDP 690
+ P
Sbjct: 314 VPP 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 2e-04
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 651 EAFGLTVVEAMTCGLPTFATCNGGPAEII------VHGKSGFHIDPYKGDQATGILVDFF 704
E L ++EAM G+P AT G E+I G +G + P +A
Sbjct: 381 EGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGE-VVPPADPEALA---RAI 436
Query: 705 EKCKVDPGHWDEISQGGLKRIQEKYTW 731
+ DP + + G KR++ YT
Sbjct: 437 LRLLKDPELRRAMGEAGRKRVERYYTL 463
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 62/299 (20%), Positives = 106/299 (35%), Gaps = 75/299 (25%)
Query: 383 KPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFT 442
K D++ + S + L A K V + IAH+ + SD + KK + +
Sbjct: 80 KYDIVHVHGSSASGFILLAAKKAGV-KVRIAHS-----HNTSDSHDKKKKILKYKVLRK- 132
Query: 443 ADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVV-NGIDAFDPKFNIVS 501
L TD++ S E AG K G+ ++ ++V+ NGID FN
Sbjct: 133 --LINRLATDYLACS---EEAG-KWLFGKVKNKK-------FKVIPNGIDLEKFIFN--- 176
Query: 502 PGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVK 561
+ +KRR + + + V R K
Sbjct: 177 ---------EEIRKKRRELGILED--KFVIGHV--------------------GRFSEQK 205
Query: 562 NLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620
N L+E + + K L++VG G+ +E ++++ + GL D G
Sbjct: 206 NHEFLIEIFAELLKKNPNAKLLLVGDGELEEE---IKKKVKEL---GLEDKVIFLGV--- 256
Query: 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII 679
+ + EL + F+ P+LYE L ++EA GLP + +
Sbjct: 257 -RNDVP-----ELLQ----AMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.002
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 647 PALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEK 706
P+ ++ + V EA CG P G E+ G+ ++ L
Sbjct: 5 PSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYR--DPEELAEKLRYLLA- 61
Query: 707 CKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740
DP I+ G +R+ ++T++ +E+LL
Sbjct: 62 ---DPEERRAIAAAGRERVLAEHTYEHRAEQLLE 92
|
Length = 92 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 784 | |||
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.98 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.97 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.97 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.96 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.88 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.86 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.84 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.84 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.83 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.81 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.79 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.77 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.75 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.74 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.73 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.73 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.66 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.61 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.56 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.51 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.49 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.42 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.38 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.36 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.31 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.25 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.24 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.23 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.22 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.22 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.14 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.95 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.86 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.85 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.83 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.79 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.77 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.63 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.56 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.4 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.36 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.3 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.28 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.26 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.21 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.21 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.0 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.97 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.84 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.74 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.58 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.57 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.4 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.38 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.38 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.35 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 97.33 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 97.3 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.12 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 96.95 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.92 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.88 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 96.82 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.8 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.73 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.7 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.7 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.55 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.45 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.35 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 96.32 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.24 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.12 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.04 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 95.97 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.87 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.77 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 95.58 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 95.4 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.35 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 94.96 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 94.73 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 94.65 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.36 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 91.18 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 90.88 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 90.84 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 89.74 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 88.6 | |
| PLN02764 | 453 | glycosyltransferase family protein | 87.22 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 86.93 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 86.04 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 85.68 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 85.39 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 82.27 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 81.59 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 81.32 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 81.31 | |
| PF03401 | 274 | TctC: Tripartite tricarboxylate transporter family | 80.66 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 80.57 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 80.47 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 80.21 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 80.05 |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-196 Score=1701.54 Aligned_cols=783 Identities=72% Similarity=1.173 Sum_probs=758.8
Q ss_pred ChhhHHHHHHHH----HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEe
Q 003947 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALR 67 (784)
Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (784)
|+|+|+++|++| ++||+||+++||++|++|||+++|+++ . + +|+||++|++||||||.|||||||||
T Consensus 13 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r 92 (815)
T PLN00142 13 IRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVR 92 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEc
Confidence 589999999999 999999999999999999999999888 2 1 89999999999999999999999999
Q ss_pred cCCceEEEEEEeeCcceeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcc
Q 003947 68 TSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKL 146 (784)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (784)
||||+|||||||++||+||+|||+|||+|||+|||+++ +++++|||||+|||+ |||||+|+||||||+||||||||||
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~-~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~ 171 (815)
T PLN00142 93 PRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSW-NDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKL 171 (815)
T ss_pred CCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCccc-CCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999984 799999999999999 9999999999999999999999999
Q ss_pred cCCccchHHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHH
Q 003947 147 FNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226 (784)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 226 (784)
|+|++++++||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+
T Consensus 172 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~ 251 (815)
T PLN00142 172 FRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVL 251 (815)
T ss_pred ccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCc
Q 003947 227 GMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 306 (784)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV 306 (784)
|||++|+|+|++|||++||+||+||||+|||+|||+||+|+|.+++|+||||||++||+|||||||++|+++|+++||+|
T Consensus 252 ~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v 331 (815)
T PLN00142 252 ETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 331 (815)
T ss_pred HHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceE
Q 003947 307 TPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDL 386 (784)
Q Consensus 307 ~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDI 386 (784)
+|+|+|+||.+++..|++|++++|.+.++++++|+|+|+++.++++++|++|+++|||++.|+.++.+.+.+..+++||+
T Consensus 332 ~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDl 411 (815)
T PLN00142 332 KPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDL 411 (815)
T ss_pred cceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999778999999999999999999999999998776789999
Q ss_pred EEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 387 IIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 387 Ih~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
||+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..+.+|++++|+++|.++++.||+||++|.+++++++
T Consensus 412 IHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~ 491 (815)
T PLN00142 412 IIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSK 491 (815)
T ss_pred EEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDS 546 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~ 546 (784)
+.++||++|.+|+||++|++++|++++++|++|||||+|...|.|+....++++.+++.+++.+|++.+.++++|++.++
T Consensus 492 ~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~ 571 (815)
T PLN00142 492 DTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDR 571 (815)
T ss_pred chhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCC
Confidence 99999999999999999999999999999999999999999999998888888889999999999999999999987788
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~-~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++++|+++||+++.||++.|++|++++++.+++++|+|||++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.
T Consensus 572 ~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~ 651 (815)
T PLN00142 572 KKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQT 651 (815)
T ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcC
Confidence 89999999999999999999999999988788999999999843 44557777788899999999999999999999888
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
+..+.+++++++++++|+||+||.+|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.++++
T Consensus 652 ~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLe 731 (815)
T PLN00142 652 NRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFE 731 (815)
T ss_pred CcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 88888999999997789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhccccccccCcccCC
Q 003947 706 KCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784 (784)
Q Consensus 706 ~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 784 (784)
+|+.||+.|++|+++|++++.++|||+.++++++++..+||||+++|+++|+|++|||||||+|+|||||++||+++|+
T Consensus 732 kLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 810 (815)
T PLN00142 732 KCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELAKTVPLAVDD 810 (815)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHhhcCCccccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999985
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-191 Score=1666.41 Aligned_cols=768 Identities=68% Similarity=1.118 Sum_probs=743.8
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEecCCceEEEEEEeeCcc
Q 003947 13 LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTV 83 (784)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (784)
++||++|+++||++||+|||+++|+++ . + +|+||++|++||||||.|||||||||||||+|||||||++||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~~~~l 84 (784)
T TIGR02470 5 RQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNVEEL 84 (784)
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEEhhhC
Confidence 799999999999999999999999988 2 1 899999999999999999999999999999999999999999
Q ss_pred eeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcccCCccchHHHHHHHHh
Q 003947 84 DVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRV 162 (784)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (784)
+||+|||+|||+|||+|||++ .+++++|||||+|||+ ||+||+||||||||+|||||||||||+|++++++||||||.
T Consensus 85 ~~~~~~~~~yl~~ke~~~~~~-~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~l~~ 163 (784)
T TIGR02470 85 SVEELTISEYLDFKEQLVNGH-PNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRV 163 (784)
T ss_pred ceeeecHHHHhhhhHhhcCcc-cCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHHHHH
Confidence 999999999999999999998 5899999999999999 99999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcc
Q 003947 163 HSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESS 242 (784)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 242 (784)
|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|||+
T Consensus 164 ~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~ 243 (784)
T TIGR02470 164 HNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPS 243 (784)
T ss_pred hccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCC
Q 003947 243 TLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVG 322 (784)
Q Consensus 243 ~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g 322 (784)
+||+|++||||+|||+|||+||+|+|.+++|+||||||++||++|||+||++|+++|+++||+|+|+|+|+||.+++..+
T Consensus 244 ~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~ 323 (784)
T TIGR02470 244 VLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG 323 (784)
T ss_pred HHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcceeeecCcCCeEEEEccCCCCcc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHH
Q 003947 323 TTCGQRVEKVYGTKYSDILRVPFRTEEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLL 401 (784)
Q Consensus 323 ~~~~~~~e~v~~~~~v~IlrvP~~~~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~ll 401 (784)
++|+++.+.+.+++|++|+|+|+++..+ ++++|++++++|||++.|+.++.+.+....+++||+||+|||+++++|.++
T Consensus 324 ~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~ll 403 (784)
T TIGR02470 324 TTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLL 403 (784)
T ss_pred cccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHH
Confidence 9999999999999999999999999877 799999999999999999999999998777789999999999999999999
Q ss_pred HHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccc
Q 003947 402 AHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLP 481 (784)
Q Consensus 402 ar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p 481 (784)
++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..||||
T Consensus 404 a~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p 483 (784)
T TIGR02470 404 ARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMP 483 (784)
T ss_pred HHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhccccccc
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCC
Q 003947 482 GLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVK 561 (784)
Q Consensus 482 ~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~K 561 (784)
++|++++|++++++|++|||||+|.+.|+|++...++....++.+++++|++++.++++|++.++++|+|+++||+++.|
T Consensus 484 ~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~K 563 (784)
T TIGR02470 484 GLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVK 563 (784)
T ss_pred ceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccC
Confidence 99999999999999999999999999999999888888888899999999999999999988888999999999999999
Q ss_pred ChHHHHHHHHHhHccCCCeEEEEEeCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcc
Q 003947 562 NLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT 640 (784)
Q Consensus 562 gi~~LieA~~~l~~~~~~v~LvIVG~g~~-~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a 640 (784)
|++.|++|+++++++.++++|+|||++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.+..+.+++|++++++
T Consensus 564 Gid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~ 643 (784)
T TIGR02470 564 NLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADT 643 (784)
T ss_pred CHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhcc
Confidence 99999999999887778899999999865 55678888889999999999999999999999876677788999999877
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003947 641 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQG 720 (784)
Q Consensus 641 advfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~ 720 (784)
+|+||+||++|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|+.||+.|++|+++
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhccccccccCcc
Q 003947 721 GLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781 (784)
Q Consensus 721 a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 781 (784)
|++++.++|||+.++++++++..+||||+++|+++|+|++|||||||+|+|||||++||++
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999975
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-167 Score=1355.53 Aligned_cols=531 Identities=64% Similarity=1.069 Sum_probs=462.5
Q ss_pred ChhhHHHHHHHH----HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEe
Q 003947 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALR 67 (784)
Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (784)
|||+|+++|++| ++||+||+++||++||||||+++|+++ + + +|+||++|++||||||.|||||||||
T Consensus 6 ~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavR 85 (550)
T PF00862_consen 6 IRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVR 85 (550)
T ss_dssp --GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEc
Confidence 689999999999 999999999999999999999999998 3 2 79999999999999999999999999
Q ss_pred cCCceEEEEEEeeCcceeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcc
Q 003947 68 TSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKL 146 (784)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (784)
||||+|||||||+++|+||+|||+|||+|||+|||++ ++++++|||||+|||+ ||+|++||||||||+||||||||||
T Consensus 86 Prpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~-~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSskl 164 (550)
T PF00862_consen 86 PRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGS-ANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKL 164 (550)
T ss_dssp EETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS--SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHH
T ss_pred CCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCc-cCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998 7899999999999999 9999999999999999999999999
Q ss_pred cCCccchHHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHH
Q 003947 147 FNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226 (784)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 226 (784)
|+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+
T Consensus 165 f~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~ 244 (550)
T PF00862_consen 165 FQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVL 244 (550)
T ss_dssp TT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHH
T ss_pred cCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCc
Q 003947 227 GMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 306 (784)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV 306 (784)
|||++|+++|+||||++||+|++||||+++|+++||||||+|+||+|+||||||++||+|||||||++|..+++.+|.+|
T Consensus 245 et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i 324 (550)
T PF00862_consen 245 ETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDI 324 (550)
T ss_dssp HHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT---
T ss_pred HHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceE
Q 003947 307 TPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDL 386 (784)
Q Consensus 307 ~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDI 386 (784)
.|+|+|+||.+|++.||+|+++++++.+++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.++++++||+
T Consensus 325 ~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~Pdl 404 (550)
T PF00862_consen 325 TPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDL 404 (550)
T ss_dssp --EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SE
T ss_pred CCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred EEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 387 IIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 387 Ih~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
||+||+++|++|.++++++|+|+|+|+|+++++||+.++++|+.++.+|||+|||++|.++|+.||+|||||+||++|++
T Consensus 405 I~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~ 484 (550)
T PF00862_consen 405 IIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQK 484 (550)
T ss_dssp EEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-S
T ss_pred EEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 532 (784)
+.+||||+|++||||+|||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 485 ~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 485 DTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp SSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999985
|
4.1.13 from EC in the following reaction: |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-60 Score=525.93 Aligned_cols=494 Identities=40% Similarity=0.631 Sum_probs=435.7
Q ss_pred eccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcchHhHHhcC
Q 003947 171 MLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTLETFLGK 250 (784)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 250 (784)
|.||++++.+.+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCccee
Q 003947 251 IPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVE 330 (784)
Q Consensus 251 ~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e 330 (784)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|+|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999988765 4455
Q ss_pred eecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEE
Q 003947 331 KVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQC 410 (784)
Q Consensus 331 ~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V 410 (784)
...+..+++|+++|+ +++.+|+ +.+|+++..|+ .+...+.+.+.+ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 566677899999998 4556677 88999999998 566677777677 999999999999999999999999999
Q ss_pred EEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccc-ceeeecC
Q 003947 411 TIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPG-LYRVVNG 489 (784)
Q Consensus 411 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~-l~~~~~g 489 (784)
.+.|.++..++...+.+|+.+...|+++++|.++...++.+| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999 8899999
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
+++|.++++.+++|.|.+.+.+.-. .++.. + ++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~----------------i---~~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDS----------------I---PE---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcc----------------c---CC----------------------
Confidence 9999999999999999988777211 11100 0 00
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
...++.+++++|+. ..++.+.|+.+++++|+++++++++.++++|.-. ..+..+.|++++++..+|++|+.
T Consensus 305 -----~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa~ 375 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPAN 375 (495)
T ss_pred -----CCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCCC
Confidence 12245677777722 1346788999999999999999999766665532 33345669999998889999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003947 650 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKY 729 (784)
Q Consensus 650 ~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~y 729 (784)
|.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|+++|++.|
T Consensus 376 -E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~f 452 (495)
T KOG0853|consen 376 -EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEMF 452 (495)
T ss_pred -CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 444 3334444445888999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhcc
Q 003947 730 TWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYR 772 (784)
Q Consensus 730 tw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 772 (784)
+|+.+.+++.++...|.+|+.++...+.+.+||++|||.|.||
T Consensus 453 s~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 453 SWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred hHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999986
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-58 Score=551.18 Aligned_cols=456 Identities=27% Similarity=0.469 Sum_probs=353.3
Q ss_pred ceEEEEEccCccccccCc-cC-CCCcccchhhhHHHHHHHHHHHHHHHHHcC--CCcccceEEEecCCCCC-CCCCcCcc
Q 003947 254 VFNVVIFTPHGYFAQDNV-LG-YPDTGGQVVYILDQVRALENEMLLRIKQQG--LDITPRILIITRLLPDA-VGTTCGQR 328 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~-lg-~p~tGG~~vyv~d~~raLe~eLa~~L~~~G--heV~~~i~VvTr~~~~~-~g~~~~~~ 328 (784)
.|.|++||+||.++.+++ +| .+|||||++||++ ||++|++.| |+|+ |+||...+. .+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~E--------LAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVE--------LARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHHH--------HHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 489999999999998887 88 5999999999994 555558888 8999 999997643 24456666
Q ss_pred eeee------------cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003947 329 VEKV------------YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQE-------L----QCKPD 385 (784)
Q Consensus 329 ~e~v------------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~-------~----~~~pD 385 (784)
.|.+ ...+|++|+|+|+++..+ |+++..+|+|+..|+..+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~----~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDK----YIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCCC----CcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 344699999999987633 6788999999999999999876541 1 12499
Q ss_pred EEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCC----CCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 386 LIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYP----DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 386 IIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~----~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
|||+||++++.++.++++.+++|+|+|.|++...|+. .+...+......|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999876643 122345566777888999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----ecCCC---CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRV-----VNGID---AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSP 533 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~-----~~gi~---~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~ 533 (784)
++ .||..|..|. |.++++ ..|+. .+.+|+.|||||||++.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 97 3555555555 444443 23433 246799999999999999986432211000 000000000
Q ss_pred hh-hh-hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 534 VE-NK-EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 534 ~~-~~-~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~--~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
.. .. +....+.++++|+|+++||+.+.||++.|++|++.+++..+ ++. +|+|++++..........+...+.+++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHH
Confidence 00 00 00111236789999999999999999999999999976433 444 466776431111111224456788999
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHcc---ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEE
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF 686 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~a---advfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~ 686 (784)
+++++.++|.|+| .++.+++..+|+.+ +|+||+||.+|+||++++||||||+|||||+.||+.|+|.++.+|+
T Consensus 542 ~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGl 617 (1050)
T TIGR02468 542 DKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGL 617 (1050)
T ss_pred HHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEE
Confidence 9999999999999 66778888888752 2799999999999999999999999999999999999999999999
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 687 HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 687 li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
+++|.|++++|++|.+ +++||+.|++|+++|++++ ++|+|+.++++|++.+...
T Consensus 618 LVdP~D~eaLA~AL~~----LL~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 618 LVDPHDQQAIADALLK----LVADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EECCCCHHHHHHHHHH----HhhCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999974 5589999999999999998 6799999999999998864
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-51 Score=467.06 Aligned_cols=426 Identities=29% Similarity=0.550 Sum_probs=316.5
Q ss_pred eEEEEEccCccccccC-ccC-CCCcccchhhhHHHHHHHHHHHHHHHHHcCC--CcccceEEEecCCCCCC-CCCcCcce
Q 003947 255 FNVVIFTPHGYFAQDN-VLG-YPDTGGQVVYILDQVRALENEMLLRIKQQGL--DITPRILIITRLLPDAV-GTTCGQRV 329 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~-~lg-~p~tGG~~vyv~d~~raLe~eLa~~L~~~Gh--eV~~~i~VvTr~~~~~~-g~~~~~~~ 329 (784)
+||+++|+||+|+|.+ ++| .|+.||+++|+. +|+++|+++|| +|+ |+|+..+... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999998 677 599999999999 66667799997 899 9998755421 12333333
Q ss_pred eeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE
Q 003947 330 EKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ 409 (784)
Q Consensus 330 e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~ 409 (784)
+.. .+|++++|+|+.+. .|.++..+++++..|...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 35799999998653 24455677888887777766655432 34799999999888899999999999999
Q ss_pred EEEecCCcccCCC---CCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceee
Q 003947 410 CTIAHALELTKYP---DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRV 486 (784)
Q Consensus 410 V~t~H~l~~~k~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~ 486 (784)
|+|.|+....+.. .....+..+...|++..+...++.+++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111112222223344444445778899999999999765431 0 111
Q ss_pred ecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHH
Q 003947 487 VNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGL 566 (784)
Q Consensus 487 ~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~L 566 (784)
..+++ +.|+.+||||+|.+.|.|........ .. . ...+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-~~----~-------~~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-EI----D-------NLLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-hH----H-------HHHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 12333 67999999999999987753211100 00 0 00011232 4567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcc---cc
Q 003947 567 VEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT---KG 642 (784)
Q Consensus 567 ieA~~~l~~~~~~v~Lv-IVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a---ad 642 (784)
++|++++.+..+..+++ |+|+|++.........+..+++..+++++++.++|+|+| .++.+++..+|+.+ +|
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCC
Confidence 99998754333334454 567665422222222344566788899999999999999 66678899988742 29
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|+|++++|++|.+ +++||+.+++|+++|+
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALED----ALSDSSQWQLWSRNGI 418 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999985 4579999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ly 742 (784)
+++.++|||+.++++++++.
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=403.20 Aligned_cols=427 Identities=17% Similarity=0.219 Sum_probs=289.3
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccceeee-
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRVEKV- 332 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~e~v- 332 (784)
|||++||.+.+|- ..+||+..++. .|+++|+++||+|. |+|+.++....... .......
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998743 35899999999 56666799999999 99988754321100 0001111
Q ss_pred --------cCcCCeEEEEccCCCCcccccccccccCChhhH---H---HHHHHHHHHHHHHcCCCceEEEEcCCChhHHH
Q 003947 333 --------YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYL---E---TFTEDVATEIIQELQCKPDLIIGNYSDGNIVA 398 (784)
Q Consensus 333 --------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl---~---~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva 398 (784)
...+|+++++++... +..+..++.+. . .|...+...+ .....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~-~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFA-EGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHH-HhcCCCCceEEECCcHHHHHH
Confidence 112467777776421 12223333332 1 2334444333 333569999999999999999
Q ss_pred HHHHHhC-----CCcEEEEecCCcccCCCCC------cchhhhc-cccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 399 SLLAHKL-----DVTQCTIAHALELTKYPDS------DINWKKL-DDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 399 ~llar~~-----gvp~V~t~H~l~~~k~~~s------~~~~~~~-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
.++++.. ++|+|+|+|++........ .+.+..+ .....+.......+.+++.||.|||+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999854321100 0000000 00111111223345578999999999998776443
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDS 546 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~ 546 (784)
... | .+.+.+.+ .....|+.+|+||+|.+.|.|.++.....+--...++...-+....++++|+. ++
T Consensus 214 ~~~--~----~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TPE--F----GYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred ccc--C----CcChHHHH------HhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 210 0 00010000 11256899999999999998864321000000000001111123456678873 34
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE-ccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW-ISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~ 625 (784)
+.++|+++||+.+.||++.+++|++++.+. +++|+|+|+|+. ...+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~g~-- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP---------ELEEAFRALAARYP--GKVGVQIGY-- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH---------HHHHHHHHHHHHCC--CcEEEEEeC--
Confidence 689999999999999999999999998763 799999998843 23456778888876 45654 452
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG------KSGFHIDPYKGDQATGI 699 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg------~~G~li~p~d~e~lAe~ 699 (784)
+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|+++++++
T Consensus 346 ---~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~ 421 (466)
T PRK00654 346 ---DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRA 421 (466)
T ss_pred ---CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHH
Confidence 3344567777 5999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.+++ .+..+++.|.+|++++.+ ++|||+.++++++++|+.
T Consensus 422 i~~~l-~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 422 LRRAL-ELYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHH-HHhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 99876 344678889999988863 789999999999999974
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=394.24 Aligned_cols=399 Identities=21% Similarity=0.255 Sum_probs=296.7
Q ss_pred EEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcC
Q 003947 257 VVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTK 336 (784)
Q Consensus 257 I~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~ 336 (784)
|++++.|+.|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+ . .....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~-----~--~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQP-----P--VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCC-----C--ccccCC
Confidence 578888887542 455666799999999 66667799999999 99976432211 1 111224
Q ss_pred CeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 337 YSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 337 ~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
++++.+++..+..+ .+...+..++..|.....+.+......+|||||+|++.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654332 1111122223334444444444433568999999998888888888999999999999987
Q ss_pred cccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCc
Q 003947 417 ELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPK 496 (784)
Q Consensus 417 ~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k 496 (784)
...+. .++....... .......+...++.+|.||++|+...+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~-~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPE-PEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCc-hHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 0000000000 00112235567899999999998766522111 1233 568
Q ss_pred eEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc
Q 003947 497 FNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL 576 (784)
Q Consensus 497 ~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~ 576 (784)
+.+||||+|.+.|.|...... ++++++ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 234555 56788999999999999999999999999776
Q ss_pred CCC--eEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 577 REL--VNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 577 ~~~--v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
.++ ++|+|+|+.... . ..+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+||
T Consensus 248 ~~~~~~~l~ivG~~~~~----g--~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g 316 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS----G--LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFG 316 (405)
T ss_pred CCCcceEEEEEeCCCCC----c--chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcC
Confidence 666 999999975321 0 123456788899999999999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++ ++|++.+++|++++++.+ ++|||+.+
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~----l~~~~~~~~~~~~~~~~~-~~fsw~~~ 391 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARL----LDDPRTRIRMGAAAVEHA-AGFSWAAT 391 (405)
T ss_pred hHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 9999999999999999999999999999999999999999999999855 479999999999999987 78999999
Q ss_pred HHHHHHHHHH
Q 003947 735 SERLLNLSGV 744 (784)
Q Consensus 735 a~~ll~ly~~ 744 (784)
+++++++|..
T Consensus 392 ~~~~~~~y~~ 401 (405)
T TIGR03449 392 ADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999974
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=389.63 Aligned_cols=435 Identities=17% Similarity=0.206 Sum_probs=293.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCc-----ce
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQ-----RV 329 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~-----~~ 329 (784)
|||+++|...+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997742 25899999999 55566699999999 9998876432110000 00
Q ss_pred --------ee----ecCcCCeEEEEccCCC---Ccc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003947 330 --------EK----VYGTKYSDILRVPFRT---EEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSD 393 (784)
Q Consensus 330 --------e~----v~~~~~v~IlrvP~~~---~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~ 393 (784)
.. ....+|++++++.... ..+ +... +..+.......|...+...+.. ...+|||||+|+|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 00 0112356666654321 000 0000 0001111122344444444433 36799999999999
Q ss_pred hhHHHHHHHHhCC---CcEEEEecCCcccC-CCCCcchh-----hhcc-ccccccchhhhhHHHhcccCEEEecChHhHh
Q 003947 394 GNIVASLLAHKLD---VTQCTIAHALELTK-YPDSDINW-----KKLD-DKYHFSCQFTADLFAMNRTDFIITSTFQEIA 463 (784)
Q Consensus 394 ~~lva~llar~~g---vp~V~t~H~l~~~k-~~~s~~~~-----~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (784)
+++++.++++..+ +|.|+|+|++.... ++.....+ ..+. ..+.+...+...+.+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999998988776 99999999986322 11111100 0000 0011111223345689999999999998776
Q ss_pred hccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccc
Q 003947 464 GSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVL 543 (784)
Q Consensus 464 ~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll 543 (784)
.+.... | .+.+.+.+ .....++.+|+||+|.+.|.|..+......--....+....+....++++|+.
T Consensus 219 ei~~~~--~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTPE--F----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCCc--C----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 433210 0 00111100 11256999999999999998854321000000000001111223456778885
Q ss_pred cCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 544 KDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 544 ~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+.+++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~~- 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRVII- 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEEEE-
Confidence 445889999999999999999999999998763 599999999842 23356677777654 5788877
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG------KSGFHIDPYKGDQAT 697 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg------~~G~li~p~d~e~lA 697 (784)
..+.+++..+++. +|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|+++++.|+++++
T Consensus 353 ---~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la 428 (473)
T TIGR02095 353 ---GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALL 428 (473)
T ss_pred ---cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHH
Confidence 4566677888884 999999999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++|.++++...+||+.|++|++++++ ++|||+.++++|+++|+.
T Consensus 429 ~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 429 AALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 99998775444499999999998863 689999999999999974
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=394.85 Aligned_cols=458 Identities=16% Similarity=0.190 Sum_probs=308.8
Q ss_pred HHHhhcCCCcchHhHHhc--CCC--cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcc
Q 003947 232 LLDLLQAPESSTLETFLG--KIP--RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDIT 307 (784)
Q Consensus 232 ~~~~~~~p~~~~~~~~~~--~~p--~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~ 307 (784)
-.++.+.+|...+..|+. +.| +.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 346667777777777664 222 459999999888743 46899999888 55666799999999
Q ss_pred cceEEEecCCCCCCCCCcC-c-----cee-eecC-----------cCCeEEEEccCCCCcccccccccccCChhh-----
Q 003947 308 PRILIITRLLPDAVGTTCG-Q-----RVE-KVYG-----------TKYSDILRVPFRTEEGIVRKWISRFEVWPY----- 364 (784)
Q Consensus 308 ~~i~VvTr~~~~~~g~~~~-~-----~~e-~v~~-----------~~~v~IlrvP~~~~~~~~~~~isr~~l~~y----- 364 (784)
|+++.++........ . ... .+.+ .+|+.++.+...... .+..|..++.+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643210000 0 000 0000 123333333210000 02223333322
Q ss_pred -HHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHH------hCCCcEEEEecCCcccCC-CCCc-----chhhhc
Q 003947 365 -LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH------KLDVTQCTIAHALELTKY-PDSD-----INWKKL 431 (784)
Q Consensus 365 -l~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar------~~gvp~V~t~H~l~~~k~-~~s~-----~~~~~~ 431 (784)
...|...++..+ .....+|||||+|+|.+++++.++.+ ..++|.|+|+|++..... +... +.+..+
T Consensus 592 RF~~FsrAaLe~~-~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELL-YQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 123333344333 33367999999999999987555443 235799999999864331 1111 111111
Q ss_pred cc--cc--cccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCC
Q 003947 432 DD--KY--HFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMT 507 (784)
Q Consensus 432 ~~--~y--~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~ 507 (784)
.. .. .+..++..-+.++..||.|+|+|+..+..+... | ...+.+. +.....|+.+|+||+|.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 00 00 011111122335667999999999988754331 1 0111111 122367999999999999
Q ss_pred CCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccC-CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEe
Q 003947 508 IYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKD-SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG 586 (784)
Q Consensus 508 ~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~-~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG 586 (784)
.|.|.++..-..+--...++-..-+....++++|+..+ ++.|+|+++||+.+.||++.+++|+..+.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542100000001111122234566788998432 467999999999999999999999988765 479999999
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc
Q 003947 587 GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 666 (784)
Q Consensus 587 ~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP 666 (784)
+|+.. ...+.++.+++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 816 dGp~~--------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 816 SSPVP--------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCCcH--------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 99641 23466888999999999999999 455556678888 499999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003947 667 TFATCNGGPAEIIVH---------GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 667 VIaT~~GG~~EiI~d---------g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ 737 (784)
+|++++||+.|+|.+ +.+|+++++.|+++++++|.+++..+..||+.|++|++++. .++|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999975 57999999999999999999888666789999999998764 378999999999
Q ss_pred HHHHHHH
Q 003947 738 LLNLSGV 744 (784)
Q Consensus 738 ll~ly~~ 744 (784)
|+++|+.
T Consensus 960 YeeLY~~ 966 (977)
T PLN02939 960 YEELYQR 966 (977)
T ss_pred HHHHHHH
Confidence 9999985
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=372.97 Aligned_cols=397 Identities=32% Similarity=0.516 Sum_probs=301.0
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+|++.|+.+.. .-|.|+.||.+.++. +|++.|+++||+|+ |+|...+.... ......
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-------~~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALP-------PIVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccC-------Cccccc
Confidence 5889999976532 245689999999999 56666799999999 88865432211 001123
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.++.+++++..+... .++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAEY-----LPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEecccccccC-----CChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 467888887644321 233345666666766666665543 23899999999888888888999999999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
+...........+. +........++..++.||.|+++|.......... .+.. ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------cccc--cc
Confidence 76433221111111 1122233456678999999999998776522211 1111 44
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.+||||+|.+.|.+....... ++.++. .+++++|+++||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888765432211 112232 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 248 ~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~ 317 (398)
T cd03800 248 LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGL 317 (398)
T ss_pred hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCc
Confidence 788999999999865211 112234677888899999999999 7778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++|++.+++|++++++++.++|||+.++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRR----LLTDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999985 45799999999999999999999999999
Q ss_pred HHHH
Q 003947 736 ERLL 739 (784)
Q Consensus 736 ~~ll 739 (784)
++++
T Consensus 394 ~~~~ 397 (398)
T cd03800 394 ARLL 397 (398)
T ss_pred HHHh
Confidence 9886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=398.20 Aligned_cols=406 Identities=14% Similarity=0.096 Sum_probs=282.0
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccce-ee
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRV-EK 331 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~-e~ 331 (784)
+|||++||.+..|- -.+||+..++. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 49999999998853 35899999999 55666699999999 99998763210000 0000 00
Q ss_pred e-----------cCcCCeEEEEccCCCCcccccccccccCChh------hHHHHHHHHHHHHHHHcCCCceEEEEcCCCh
Q 003947 332 V-----------YGTKYSDILRVPFRTEEGIVRKWISRFEVWP------YLETFTEDVATEIIQELQCKPDLIIGNYSDG 394 (784)
Q Consensus 332 v-----------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~------yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~ 394 (784)
+ ...+|+.++.+.... + +..+..++. ....|...++..+. ....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 011245555543211 1 111222222 12234444444433 3356899999999999
Q ss_pred hHHHHHHHHh------CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccc
Q 003947 395 NIVASLLAHK------LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468 (784)
Q Consensus 395 ~lva~llar~------~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (784)
++++.++++. .++|+|+|+|++.... ++ -..++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9998888774 3589999999864210 00 1136789999999999877633221
Q ss_pred ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhh-hHHhhcCchhhhhhhccccCCC
Q 003947 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSE-IEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 469 vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~-~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.++.....|+.+|+||||.+.|.|.++......--... .+-..-+....++++|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 11221246999999999999998864321000000000 000011123456778873 247
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC--CCcEEEccCcC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL--NGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L--~~~V~flG~~~ 625 (784)
.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|++. ...+.+.++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g~-- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCLT-- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEec--
Confidence 8999999999999999999999999865 47999999999651 234678888998876 678999873
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCCC
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG-------------KSGFHIDPYK 692 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg-------------~~G~li~p~d 692 (784)
.+......+|+ ++|+||+||.+|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|
T Consensus 908 --~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d 984 (1036)
T PLN02316 908 --YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD 984 (1036)
T ss_pred --CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC
Confidence 22222346777 5999999999999999999999999999999999999999884 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 985 ~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 985 AAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999776422 3344556777777888899999999999999975
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=373.49 Aligned_cols=396 Identities=11% Similarity=0.101 Sum_probs=284.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCC---CcCcceee
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGT---TCGQRVEK 331 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~---~~~~~~e~ 331 (784)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+......+. .+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 56789999988 66667799999999 999652111110 01111111
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcE
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQ 409 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~ 409 (784)
....++++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1223579999998643210 00000 11111 12333334444433346899999998654 456778889899999
Q ss_pred EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecC
Q 003947 410 CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNG 489 (784)
Q Consensus 410 V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~g 489 (784)
++++|+.+.......... +. ....++. ...++.+++.||.||++|+...+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLL-KG-GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCc-cC-cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 999998653211000000 00 0000111 124667899999999999887763211 23
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
++ ..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADV----------------DALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccch----------------HHHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 668999999999988876532110 012244565 5677899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||.
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~ 312 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQK 312 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeec
Confidence 998854 57899999999854 35678889999986 799999 6778899999995 999999999
Q ss_pred CCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 650 YEA----FGLTVVEAMTCGLPTFATCNGG--PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 650 ~E~----fGltvlEAMA~GlPVIaT~~GG--~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++++|++++|++|.+ +++|++.+++|+++|++
T Consensus 313 ~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 313 AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA----LARQALLRPKLGTVARE 386 (412)
T ss_pred cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHH
Confidence 998 5777899999999999998877 468886 58999999999999999974 45799999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 003947 724 RIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 724 ~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++|||+.++++++++|+.
T Consensus 387 ~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 387 YAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999874
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=381.34 Aligned_cols=439 Identities=16% Similarity=0.181 Sum_probs=294.6
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC--cCc--
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT--CGQ-- 327 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~--~~~-- 327 (784)
|| |||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999888743 57899888777 45566799999999 9998875432210 000
Q ss_pred ceeeec--CcCCeEEEEc--cCCCCccc----c--cccccccCChh-------h------HHHHHHHHHHHHHHHcCCCc
Q 003947 328 RVEKVY--GTKYSDILRV--PFRTEEGI----V--RKWISRFEVWP-------Y------LETFTEDVATEIIQELQCKP 384 (784)
Q Consensus 328 ~~e~v~--~~~~v~Ilrv--P~~~~~~~----~--~~~isr~~l~~-------y------l~~f~~~~~~~i~~~~~~~p 384 (784)
....+. -.....+.++ ...+..++ + ..+..|..++. | ...|...+++.+ .....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 011110 0001122211 00000010 0 11122222221 1 113333344333 3335689
Q ss_pred eEEEEcCCChhHHHHHHHHhC-------CCcEEEEecCCcccCCCCCcch-----hhhccccccccchhhhhHHHhcccC
Q 003947 385 DLIIGNYSDGNIVASLLAHKL-------DVTQCTIAHALELTKYPDSDIN-----WKKLDDKYHFSCQFTADLFAMNRTD 452 (784)
Q Consensus 385 DIIh~~~~~~~lva~llar~~-------gvp~V~t~H~l~~~k~~~s~~~-----~~~~~~~y~~~~~~~~e~~a~~~AD 452 (784)
||||+|+|.+++++.++++.. ++|+|+|+|++........... +........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887654 7999999999754321110000 0000000011112234456889999
Q ss_pred EEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcC
Q 003947 453 FIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532 (784)
Q Consensus 453 ~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 532 (784)
.|+|+|+..++.+.+.. . ..+.+++..+ ....|+.+|+||+|.+.|.|.++...+.+--...++...-+
T Consensus 223 ~VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998887543310 0 0112222211 11568999999999999998654211000000011111112
Q ss_pred chhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc
Q 003947 533 PVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY 612 (784)
Q Consensus 533 ~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l 612 (784)
+...++.+|+..++++|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~ 360 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK---------EYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH---------HHHHHHHHHHHHC
Confidence 3455667888666788999999999999999999999999875 4799999999853 2346778888877
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEE
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH----GKSGFHI 688 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d----g~~G~li 688 (784)
.++|.|+| .++.+++.++++. +|+||+||.+|+||++.+|||+||+|+|+++.||+.|.+.+ +.+|+++
T Consensus 361 --~~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 361 --PEQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred --CCCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 47899998 5667788899994 99999999999999999999999999999999999998864 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++.|+++++++|.+++ .+..|++.|.++++++. .++|||+.++++|+++|+.
T Consensus 434 ~~~d~~~la~ai~~~l-~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 434 HDYTPEALVAKLGEAL-ALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCCHHHHHHHHHHHH-HHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 9999999999999876 46689999999988764 4789999999999999974
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=371.04 Aligned_cols=365 Identities=17% Similarity=0.226 Sum_probs=271.5
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 6899987776 56799999999 66666799999999 998764322110 0 112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChh--HHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGN--IVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~--lva~llar~~gvp~V~t~ 413 (784)
.++.+.++|...... ...+..+. .+...+.+.+. +.+|||||+|+..+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~~~~-~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLPTFF-GTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccccchh-hhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 467888888643211 00111111 11122222222 458999999987653 346777888999999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+..... +..... .. ......++++|.+|++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9864211 000000 00 112346789999999998765411 0112233
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.+++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999887664321 035678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~~ 282 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEAF 282 (398)
T ss_pred HhhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhcc
Confidence 88889999999999853 356788999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++||||||+|||+|+.||.+|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+.
T Consensus 283 g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHHH
Confidence 999999999999999999999999998863 44454 48999999998655 5666666788999999999999999
Q ss_pred HHHHHHHHHHH
Q 003947 734 YSERLLNLSGV 744 (784)
Q Consensus 734 ~a~~ll~ly~~ 744 (784)
++++++++|+.
T Consensus 357 ~~~~~~~~y~~ 367 (398)
T cd03796 357 VAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999975
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=376.12 Aligned_cols=434 Identities=17% Similarity=0.185 Sum_probs=292.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCc--cee---
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQ--RVE--- 330 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~--~~e--- 330 (784)
||++||+..+|- ..+||...++- .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999887643 36899999999 55556699999999 9998866432210000 000
Q ss_pred ------------eecCcCCeEEEEccCCCCcc--cc--cccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh
Q 003947 331 ------------KVYGTKYSDILRVPFRTEEG--IV--RKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG 394 (784)
Q Consensus 331 ------------~v~~~~~v~IlrvP~~~~~~--~~--~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~ 394 (784)
.....+|+.+++++...... .. ..+.....-......|...+...+.. ...+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112356676664322110 00 00000000001112344444444433 367999999999999
Q ss_pred hHHHHHHHHhC------CCcEEEEecCCcccCCCCCc------chh--hhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 395 NIVASLLAHKL------DVTQCTIAHALELTKYPDSD------INW--KKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 395 ~lva~llar~~------gvp~V~t~H~l~~~k~~~s~------~~~--~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
++++.+++... ++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888887763 89999999998643311100 000 00001112223345677889999999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++.+.+..+ .+.+.+. +.....|+.+|+||+|.+.|.|..+......-..........+....++++
T Consensus 221 ~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 7764332100 0000000 011256999999999999998865432110000000111122234456778
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|+. ...+.++++++++ .+++.+
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~~~~~~~~~--~~~v~~ 355 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP---------EYEEALRELAARY--PGRVAV 355 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH---------HHHHHHHHHHHhC--CCcEEE
Confidence 875457899999999999999999999999998764 499999999843 2345666777665 567887
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCCHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGK------SGFHIDPYKGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~------~G~li~p~d~e 694 (784)
++ ..+.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|++++|.|++
T Consensus 356 ~~----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~ 430 (476)
T cd03791 356 LI----GYDEALAHLIYAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNAD 430 (476)
T ss_pred EE----eCCHHHHHHHHHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHH
Confidence 65 3445566777884 9999999999999999999999999999999999999999988 99999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++++|.+++ .+..+++.|.+|++++.+ +.|||+.++++++++|+
T Consensus 431 ~l~~~i~~~l-~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 431 ALLAALRRAL-ALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHH-HHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999876 345679999999988865 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=371.09 Aligned_cols=435 Identities=16% Similarity=0.187 Sum_probs=282.7
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcC-cceeee
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCG-QRVEKV 332 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~-~~~e~v 332 (784)
.|||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+......... .....+
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999887743 57999888777 45666799999999 999887543211000 011111
Q ss_pred cCc-C-CeEEEEccCCCCcc--cc--cccccccC-Ch------hh---HH---HHHHHHHHHHHHHc--CCCceEEEEcC
Q 003947 333 YGT-K-YSDILRVPFRTEEG--IV--RKWISRFE-VW------PY---LE---TFTEDVATEIIQEL--QCKPDLIIGNY 391 (784)
Q Consensus 333 ~~~-~-~v~IlrvP~~~~~~--~~--~~~isr~~-l~------~y---l~---~f~~~~~~~i~~~~--~~~pDIIh~~~ 391 (784)
... . .+++....... -. ++ ..+..|.. ++ +| .+ .|...++ ++.... ..+|||||+|+
T Consensus 64 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~-~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 64 PDLFGGPARLLAARAGG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAA-AIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred eeeCCceEEEEEEEeCC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHH-HHHhhhccCCCCCEEEECC
Confidence 100 0 12222211100 00 00 11111221 11 11 11 2333233 233221 46899999999
Q ss_pred CChhHHHHHHHH--hCCCcEEEEecCCcccC-CCCCc-----chhhhccc-cccccchhhhhHHHhcccCEEEecChHhH
Q 003947 392 SDGNIVASLLAH--KLDVTQCTIAHALELTK-YPDSD-----INWKKLDD-KYHFSCQFTADLFAMNRTDFIITSTFQEI 462 (784)
Q Consensus 392 ~~~~lva~llar--~~gvp~V~t~H~l~~~k-~~~s~-----~~~~~~~~-~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 462 (784)
|.+++++.++.. ..++|.|+|+|++.... ++... ..+..+.. ...+.......+.++..||.|+|+|+..+
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999888877763 24689999999985432 11100 01110000 00011111224567899999999998877
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhcc
Q 003947 463 AGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCV 542 (784)
Q Consensus 463 ~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gl 542 (784)
+.+.+... .+.+.+.+ .....|+.+|+||+|.+.|.|.++.....+-....++....+....++++|+
T Consensus 222 ~ei~~~~~------g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEA------GMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccC------CcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 64332100 00010000 1125689999999999999886542110000000011111122345677888
Q ss_pred ccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE-EEc
Q 003947 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF-RWI 621 (784)
Q Consensus 543 l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V-~fl 621 (784)
..+++.++|+++||+.+.||++.+++|+.++.+ .+++|+|+|+|+. ...+.+++++++++ +++ .|+
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA---------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH---------HHHHHHHHHHHHCC--CCEEEEe
Confidence 544578899999999999999999999998875 4799999999843 23456777777764 455 788
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG---------KSGFHIDPYK 692 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg---------~~G~li~p~d 692 (784)
|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|.|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 84 35788877535999999999999999999999999999999999999999875 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++++|.+++ .+++|++.|++|+++++ .++|||+.++++++++|+.
T Consensus 431 ~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 431 ADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHH
Confidence 999999998765 36689999999999986 3789999999999999985
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=357.36 Aligned_cols=378 Identities=21% Similarity=0.308 Sum_probs=273.7
Q ss_pred eEEEEEccCccccccCccCCCC-cccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPD-TGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~-tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~ 333 (784)
|||++++..++ |+ .||.+.++. +|++.|+++ |+|+ |+|.... . .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~---------~----~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQ---------R----F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCc---------h----h
Confidence 79999987665 34 499999999 555556766 7777 6664311 1 1
Q ss_pred CcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEe
Q 003947 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 334 ~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~ 413 (784)
..+++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|+|.+.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766542211 111112222222221 1111347999999998887778878888899999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|++........ ......+.+.. ..++..++.+|.||++|+...+.+.+.. .+++
T Consensus 114 h~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKE----EQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred ecccccccccc----cccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 99754221000 00111122211 2366788999999999988766322210 1233
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.+||||+|.+.|.|...... ++++|+ ++++++|+++||+.+.||++.+++|+.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVV-------------------LDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHH-------------------HHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 568999999999988876533221 234565 56788999999999999999999999987
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC-CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
. ++++++++|++++. .+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 227 ~---~~~~l~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred h---hcCcEEEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 5 46899999987641 1234556677777765 35688775 26778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG------DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQ 726 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~------e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~ 726 (784)
||++++|||+||+|||+|+.||..|++.++.+|++++++|. ++++++|. ++++||+.+++|++++++++.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~----~l~~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAIN----ILLADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHH----HHHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 77777776 455799999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003947 727 EKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 727 ~~ytw~~~a~~ll~ly~~ 744 (784)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999974
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=361.80 Aligned_cols=281 Identities=17% Similarity=0.263 Sum_probs=230.1
Q ss_pred CCCceEEEEcCCChhHHHHHHHH--hCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAH--KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar--~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+..... ......++. .....+++||+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhhH-----HHHHHHHhCCEEEECC
Confidence 55799999999887777777765 44567789999853211 000011110 1223578999999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
+...+.+.+ .|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 876652211 2333 6699999999999887653211
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
...++..|+++||+.+.||++.+++|++.+++..++++|+|+|+|+. .++++++++++++.++|
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW-----------ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 02345679999999999999999999999988788999999999943 46788999999999999
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d 692 (784)
.|+| .++.+++..+++. +|+||+||.. ||||++++||||||+|||+|+.||++|+|.+|.+|++++|+|
T Consensus 282 ~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d 356 (406)
T PRK15427 282 EMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND 356 (406)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC
Confidence 9999 7778899999995 9999999974 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKV-DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~-dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++|++|.+ +++ ||+.+++|+++|++++.++|+|+.+++++.++|+.
T Consensus 357 ~~~la~ai~~----l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 357 AQALAQRLAA----FSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999985 446 99999999999999999999999999999999874
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=348.00 Aligned_cols=366 Identities=20% Similarity=0.283 Sum_probs=264.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 69999973 34599999999 66666799999999 88865322100 01
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh----CCCcEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK----LDVTQC 410 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~----~gvp~V 410 (784)
..++.+..++.... + ......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322111 0 00011111112222333332 458999999987654433333322 379999
Q ss_pred EEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCC
Q 003947 411 TIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGI 490 (784)
Q Consensus 411 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi 490 (784)
++.|+....... ....+. ...+..++.+|.|+++|....+.+.+. +.
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~ 162 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------FD 162 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------cC
Confidence 999975321100 011111 123457889999999998776522211 00
Q ss_pred CCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHH
Q 003947 491 DAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWY 570 (784)
Q Consensus 491 ~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~ 570 (784)
...++.+||||+|...|.+...... ++.++. .+++++++++||+.+.||++.+++++
T Consensus 163 --~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 163 --ITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred --CcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 1568999999999887766443221 123444 56778999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 571 ~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
..+.+. .+++|+++|+|++ .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~ 280 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEK 280 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCc
Confidence 998764 5689999999865 24577788899999999999943 268888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++||+.+.+|++++++.+.++||
T Consensus 281 E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 281 ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALS----LLEDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred CCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999974 457999999999999999889999
Q ss_pred HHHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSGV 744 (784)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (784)
|+.+++++.++|+.
T Consensus 357 ~~~~~~~~~~~y~~ 370 (371)
T cd04962 357 SERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=351.25 Aligned_cols=374 Identities=17% Similarity=0.200 Sum_probs=274.9
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
|+-||++++.--++-|. ...||.+.++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67799999888876542 34699999999 66666743 888 9997754211 111
Q ss_pred cCcCCeEEEEccCCCCcc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEE
Q 003947 333 YGTKYSDILRVPFRTEEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~ 411 (784)
...+|+.+.++++....+ ...+|.+. .-+ .|...+...+......++||||+|... .+...+..+..+.|++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112356677776643221 12233332 122 233344444433324579999999855 34555556667789999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.... ..++.++.||++|....+...+ +.+
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 99964210 1245689999999877652111 112
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+||||+|.+.|.+...... ++++|+ ++++++|+++||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNL-------------------RQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHH-------------------HHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 558999999999988876543211 133555 456789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-C
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-Y 650 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 650 (784)
++.+.+|+++|+|+|+++.. ...+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||. .
T Consensus 217 ~l~~~~p~~~lvivG~g~~~--~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~ 287 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS--SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVE 287 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc--cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCc
Confidence 99888899999999998642 11122344566777777765 5799999 6777899999995 999999997 5
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF-HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKY 729 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~-li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~y 729 (784)
|+||++++||||||+|||+|+.||++|++.++.+|+ +++|.|++++|++|.+ +++|++. .+|+++|++++.++|
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~----ll~d~~~-~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR----TLADPEL-TQIAEQAKDFVFSKY 362 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH----HHcCHHH-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 5688999999999974 5579985 789999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 003947 730 TWKIYSERLLNLSGV 744 (784)
Q Consensus 730 tw~~~a~~ll~ly~~ 744 (784)
||+.++++++++|+.
T Consensus 363 sw~~~a~~~~~~l~~ 377 (380)
T PRK15484 363 SWEGVTQRFEEQIHN 377 (380)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999875
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=361.00 Aligned_cols=378 Identities=18% Similarity=0.249 Sum_probs=263.9
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
+.|||+++. +..+ -+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~- 106 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE- 106 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc-
Confidence 348999996 3321 145699999998 56666799999999 888653210 00
Q ss_pred cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEE
Q 003947 333 YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~ 411 (784)
..++.+++++..... . .... .+.+ .+...+.+.+. +.+|||||+|++.. .+.+.++++..++|+|.
T Consensus 107 --~~g~~v~~~~~~~~~-~----~~~~-~~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 107 --FHGAKVIGSWSFPCP-F----YQKV-PLSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred --ccCceeeccCCcCCc-c----CCCc-eeec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 123444443321110 0 0000 0000 01112223332 34899999998654 34566678889999999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.......... +... .... ...++..++.+|.|+++|....+.+.+. ...+
T Consensus 174 ~~h~~~~~~~~~~~--~~~~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~-------------------~~~~ 227 (465)
T PLN02871 174 SYHTHVPVYIPRYT--FSWL---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAA-------------------GVTA 227 (465)
T ss_pred EEecCchhhhhccc--chhh---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHc-------------------CCCC
Confidence 99975432111111 1000 0000 1123456889999999998876632211 1112
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+||||+|.+.|.|....... ++++.. ..+++++|+|+||+.+.||++.++++++
T Consensus 228 --~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 228 --ANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred --cCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 5689999999999988775332111 111211 1346789999999999999999999988
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCC
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 651 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 651 (784)
++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|++|+||..|
T Consensus 287 ~~----~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~E 342 (465)
T PLN02871 287 RL----PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSESE 342 (465)
T ss_pred hC----CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCccc
Confidence 75 5799999999853 2445555543 3699999 6777899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 652 AFGLTVVEAMTCGLPTFATCNGGPAEIIVH---GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~GG~~EiI~d---g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
+||++++||||||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+ +++||+.+++|++++++++ ++
T Consensus 343 ~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~~~~~a~~~~-~~ 417 (465)
T PLN02871 343 TLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLET----LLADPELRERMGAAAREEV-EK 417 (465)
T ss_pred ccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999999999999999 999999999999999999975 4579999999999999998 78
Q ss_pred CCHHHHHHHHHH-HHHH-hhhhh
Q 003947 729 YTWKIYSERLLN-LSGV-YGFWK 749 (784)
Q Consensus 729 ytw~~~a~~ll~-ly~~-~~~~~ 749 (784)
|||+.+++++++ +|+. .-+|+
T Consensus 418 fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 418 WDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 6875 23443
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=345.79 Aligned_cols=364 Identities=15% Similarity=0.198 Sum_probs=248.2
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHH--
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTED-- 371 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~-- 371 (784)
+|+++|+++||+|+ ++|....... .+ |+++++++...... ...++|...+...
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57778899999999 9987643210 01 58888887543311 1233343333222
Q ss_pred ----HHHHHHH--HcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccc---cccccchh
Q 003947 372 ----VATEIIQ--ELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDD---KYHFSCQF 441 (784)
Q Consensus 372 ----~~~~i~~--~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~---~y~~~~~~ 441 (784)
+.+.+.. ..+.+|||||+|...+ .+..+++. .++|+|...|-+................. ..+.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRN 147 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhh
Confidence 2222222 1245899999997654 22334444 46888876653322111000000000000 01111111
Q ss_pred hhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhc
Q 003947 442 TADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKH 521 (784)
Q Consensus 442 ~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~ 521 (784)
...+..++.||.+|++|....+...+ .+..|+.|||||+|.+.|.|......+..
T Consensus 148 ~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~- 202 (396)
T cd03818 148 ALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP- 202 (396)
T ss_pred hHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc-
Confidence 11345789999999999887652111 11468999999999999887654322111
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHH-
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQ- 599 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~- 599 (784)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++........+..
T Consensus 203 ----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~ 264 (396)
T cd03818 203 ----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGE 264 (396)
T ss_pred ----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcc
Confidence 11112 456789999998 9999999999999999988889999999998532111000000
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003947 600 AEMKKMYGLIDTYK---LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA 676 (784)
Q Consensus 600 ~~~~~l~~li~~l~---L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~ 676 (784)
...+. ++++++ ..++|.|+| .++.+++.++|+. +|++|+||..|++|++++||||||+|||+|+.||+.
T Consensus 265 ~~~~~---~~~~~~~~~~~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 265 SWKQH---MLDELGGRLDLSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cHHHH---HHHHhhcccCcceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 01122 223332 247899999 7778899999995 999999999999999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 677 EIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
|++.++.+|++++++|++++|++|.+ +++||+.+.+|+++|++++.++|||+.++++++
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIE----LLDDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999999984 557999999999999999989999999999886
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=340.22 Aligned_cols=386 Identities=20% Similarity=0.244 Sum_probs=261.0
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .......+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~------~~~~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS------HCFEETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch------hcchhccC
Confidence 79999976643 489999999 66666799999999 998642211 00011111
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEII--QELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~--~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t 412 (784)
.++.+...+.....+. .++ .. .+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~~----~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRSI----FGR--FH-ILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcchh----hHh--HH-HHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 0122222211000000 000 00 01111111111111 112568999999876543322 233334899999
Q ss_pred ecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 413 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
.|...... .....+ ....++.. ....|..+++.||.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~--~~~~~~--~~~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLL--AQRGSL--LKRLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHh--cCCCcH--HHHHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 99422110 000000 00111110 112466789999999999987665222211 0111
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
..++.+|+||+|.+.|.+......+ +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888764322100 11121 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh-cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC
Q 003947 573 NAKLR---ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648 (784)
Q Consensus 573 l~~~~---~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 648 (784)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++||
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s 307 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTP 307 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECC
Confidence 98776 79999999998652 12233456778889999 99999999999 6778899999995 99999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 649 ~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+ ++++|+.+++|+++|++++.++
T Consensus 308 ~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~----l~~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLK----LANDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999976 89999999874 5579999999999999999999
Q ss_pred CCHHHHHHHH
Q 003947 729 YTWKIYSERL 738 (784)
Q Consensus 729 ytw~~~a~~l 738 (784)
|||+.+++++
T Consensus 383 ~s~~~~~~~~ 392 (392)
T cd03805 383 FSTEAFAERL 392 (392)
T ss_pred cCHHHHhhhC
Confidence 9999998864
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=337.23 Aligned_cols=365 Identities=16% Similarity=0.188 Sum_probs=260.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+.+.++. ..||++.++. +|++.|.+.|+++. |++....+ ...+....
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~--------~~~~~~~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS--------AFRKRIQR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC--------hhHHHHHh
Confidence 677775443 3599999999 55556688999987 77632111 11111111
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE-EEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ-CTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~-V~t~H 414 (784)
.++.+++++..... .+. +...+.+.+.+ .+|||||+|+..+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~~-----------~~~----~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPGK-----------DVA----VYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCCC-----------ChH----HHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 35677777643210 111 11223333333 4899999997644 33455666677774 44555
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+....... ...| .+.+ ..+...+.+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211100 0011 1111 23345567899999998876522211 1233 5
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+......... +.... .+++++|+++||+.+.||++.+++|+..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 68999999999988876542211100 01111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 575 KLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 575 ~~~~----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|.+ +++..+++. +|++|+||..
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~ 282 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLA 282 (374)
T ss_pred HhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEecccc
Confidence 6544 789999999853 35678888999999999999943 368888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++|++.+.+++++|++++.++||
T Consensus 283 Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 283 EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQP----YVSDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSGV 744 (784)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (784)
|+.++++++++|+.
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999974
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=331.29 Aligned_cols=282 Identities=19% Similarity=0.286 Sum_probs=230.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+||+|....+..+..++++.|+|++++.|+......... .... .+.. ....+...++.+|.|+++|+.
T Consensus 80 ~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~----~~~~-~~~~--~~~~~~~~~~~~d~ii~~s~~ 152 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLAL----LLRS-RWAL--YARRRRRLARRAALFIAVSQF 152 (367)
T ss_pred hhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchh----hccc-chhH--HHHHHHHHHHhcCEEEECCHH
Confidence 34899999998777788888899999999999997543221110 0000 0111 112344578899999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+...+ .|++ ..++.++|||+|.+.|.+...
T Consensus 153 ~~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~-------------------------- 184 (367)
T cd05844 153 IRDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP-------------------------- 184 (367)
T ss_pred HHHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC--------------------------
Confidence 7652211 1333 668999999999877665311
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
..++++++++|++.+.||++.+++|+..+.+..++++|+++|+|+. .++++++++++++.++|+|
T Consensus 185 ----~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ----ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL-----------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ----CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH-----------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998742 3567888999999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 6778899999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
+++++|.++ ++|++.+++|+.++++++.++|||+.+++++.++
T Consensus 325 ~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 325 ALAAALGRL----LADPDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred HHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 999999854 5799999999999999999999999999998763
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=339.58 Aligned_cols=400 Identities=15% Similarity=0.128 Sum_probs=269.9
Q ss_pred CCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcc--
Q 003947 273 GYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEG-- 350 (784)
Q Consensus 273 g~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~-- 350 (784)
|+-..||.+..+..++-++.....+.=+-.|+.|..+|.++||......|..+--..-...+.++..+-+++..-...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 344579999999987776655444444445788888899999997766664443211111233334444444211110
Q ss_pred ----cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEE-ecCCcccCCCCCc
Q 003947 351 ----IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI-AHALELTKYPDSD 425 (784)
Q Consensus 351 ----~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t-~H~l~~~k~~~s~ 425 (784)
.++.+++ .+.|-. .+.......+++ ..+|||||+|...+++.+.++++..++|++++ .|+.... .
T Consensus 249 ~~~~~~~~~~~--~~~~~~-~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~----~- 318 (578)
T PRK15490 249 IESPELRLLLS--HLPPVC-KYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV----V- 318 (578)
T ss_pred ccchHHHHHHh--cCChHH-HHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc----c-
Confidence 0111111 011111 111112222222 45999999999888888999999999999654 5652111 0
Q ss_pred chhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCC
Q 003947 426 INWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGAD 505 (784)
Q Consensus 426 ~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD 505 (784)
....+...+....+ .......+| +++.|....+.+.+ ..+++ ..|+.|||||+|
T Consensus 319 -~~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~lgip--~~KI~VIyNGVD 372 (578)
T PRK15490 319 -RKRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WLKLE--AKHFQVVYNGVL 372 (578)
T ss_pred -hhhHHHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------HhCCC--HHHEEEEeCCcc
Confidence 00001111110000 001133344 44555443331111 12343 779999999999
Q ss_pred CCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEE
Q 003947 506 MTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV 585 (784)
Q Consensus 506 ~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIV 585 (784)
...|.|........+. ....++ +++.++|+++||+.+.||...+++++.++.+..++++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988875432110000 001222 34568999999999999999999999988777799999999
Q ss_pred eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC
Q 003947 586 GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 665 (784)
Q Consensus 586 G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl 665 (784)
|+|+. .++++++++++++.++|.|+|++ +++..+|+. +|+||+||.+|+||++++||||||+
T Consensus 436 GdG~~-----------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~Gl 497 (578)
T PRK15490 436 GDGDL-----------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGV 497 (578)
T ss_pred eCchh-----------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCC
Confidence 99853 46788999999999999999943 468888885 9999999999999999999999999
Q ss_pred cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 666 PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 666 PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|||+|+.||..|+|.+|.+|+++++.|++++++++..+ .++..++..+..|+++|++++.++|||+.++++|+++|..
T Consensus 498 PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 498 PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988876422 2445566667789999999999999999999999999864
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=322.43 Aligned_cols=361 Identities=16% Similarity=0.188 Sum_probs=254.0
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999998874 35799999999 66666799999999 88865332110 1122
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.+++++++|.....+ . ......+ ..+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~-~---------~~~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG-L---------GTIIYDI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc-h---------hhhHHHH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 467888887643211 0 0000000 01111111 134666666655544 34444555669999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
...... .|..... .+ ....++.+++.||.||++|+...+...+. .|.
T Consensus 118 ~~~~~~-----~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----- 164 (363)
T cd04955 118 LEWKRA-----KWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----- 164 (363)
T ss_pred cceeec-----ccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC-----
Confidence 643211 1111100 01 11245667899999999998877632111 121
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
+..+||||+|...+.+.... .+..+. ++++.++++||+.+.||++.+++|++++.+
T Consensus 165 ~~~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 165 DSTYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred CCeeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 22899999998766541111 012232 334578899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC-CCC
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAF 653 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~f 653 (784)
+++|+++|+++.. ..+.+.+. .+++.++|+|+| .++.+++.++++. +|++++||.. |+|
T Consensus 221 ---~~~l~ivG~~~~~-----------~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~ 281 (363)
T cd04955 221 ---GKKLVIVGNADHN-----------TPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGGT 281 (363)
T ss_pred ---CceEEEEcCCCCc-----------chHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCCC
Confidence 7999999998541 12233333 677889999999 6778899999995 9999999998 999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|. ++++|++.+.++++++++++.++|||+.
T Consensus 282 ~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~----~l~~~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 282 NPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLE----ELEADPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHH----HHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999976 7999988775 787776 5567999999999999999988999999
Q ss_pred HHHHHHHHHH
Q 003947 734 YSERLLNLSG 743 (784)
Q Consensus 734 ~a~~ll~ly~ 743 (784)
++++++++|+
T Consensus 354 ~~~~~~~~y~ 363 (363)
T cd04955 354 IADQYEELYK 363 (363)
T ss_pred HHHHHHHHhC
Confidence 9999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=350.29 Aligned_cols=459 Identities=12% Similarity=0.111 Sum_probs=291.5
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCChHHH-------HHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcchHhHHhcC
Q 003947 178 DLGTLQSSLRMAEKYLSMLAPDTSYAEF-------EQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTLETFLGK 250 (784)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 250 (784)
..+.=..++++|.+..+.=. .-|.+. ..-+|.+|=|----++--|+.-|-+++...-+- .+.| |-.-
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~ 276 (694)
T PRK15179 203 ALWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRR---RNAE-YDAG 276 (694)
T ss_pred CHHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhc---Cccc-ccCC
Confidence 34444556666655544333 122222 224677877765556667877777777654421 1110 0011
Q ss_pred CCcce-EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCC------------CcccceEEEecCC
Q 003947 251 IPRVF-NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL------------DITPRILIITRLL 317 (784)
Q Consensus 251 ~p~~m-kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~Gh------------eV~~~i~VvTr~~ 317 (784)
+-... ||+++.+.. ..||.+.++++++.+ +.+.|. ++. |++++..
T Consensus 277 ~~~~~~rIl~vi~sl-----------~~GGAEr~~~~La~~--------l~~~~~~~~~~~g~g~~~~~~--V~~~~~~- 334 (694)
T PRK15179 277 PESFVGPVLMINGSL-----------GAGGAERQFVNTAVA--------LQSAIQQGQSIAGYGVLGPVQ--VVCRSLR- 334 (694)
T ss_pred CCCCcceEEEEeCCC-----------CCCcHHHHHHHHHHH--------HHhcccCcccccCccCCCCcE--EEEEecc-
Confidence 11234 888885443 359999999955555 577644 233 2243221
Q ss_pred CCCCCC-CcCcceeeecCcCCeEEEEccCCCCccccc--ccc---cc--cCChhhHHHHHHHHHHHHHHHcCCCceEEEE
Q 003947 318 PDAVGT-TCGQRVEKVYGTKYSDILRVPFRTEEGIVR--KWI---SR--FEVWPYLETFTEDVATEIIQELQCKPDLIIG 389 (784)
Q Consensus 318 ~~~~g~-~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~--~~i---sr--~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~ 389 (784)
...|+ .+...+. ..|+.+..++..+..+... .+. .+ ..+..........+.+.+. +.+|||||+
T Consensus 335 -~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk---~~kpDIVH~ 406 (694)
T PRK15179 335 -SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMR---SSVPSVVHI 406 (694)
T ss_pred -cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHH---HcCCcEEEE
Confidence 11111 1111111 1356666665443211000 000 00 0000011111222233232 448999999
Q ss_pred cCCChhHHHHHHHHhCCCcEEE-EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccc
Q 003947 390 NYSDGNIVASLLAHKLDVTQCT-IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468 (784)
Q Consensus 390 ~~~~~~lva~llar~~gvp~V~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (784)
|.+.+++++.++++..++|+|+ +.|++..... .. .++ ..+... ...+....++.+|++|....+...
T Consensus 407 h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~--~~-~~~---~~~~~l----~~~l~~~~~~i~Vs~S~~~~~~l~-- 474 (694)
T PRK15179 407 WQDGSIFACALAALLAGVPRIVLSVRTMPPVDR--PD-RYR---VEYDII----YSELLKMRGVALSSNSQFAAHRYA-- 474 (694)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEEEeCCCccccc--hh-HHH---HHHHHH----HHHHHhcCCeEEEeCcHHHHHHHH--
Confidence 9999988999999999999876 5576432111 00 110 011110 111222334566666655443111
Q ss_pred ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCC
Q 003947 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSK 548 (784)
Q Consensus 469 vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k 548 (784)
...|++ ..|+.|||||||...|.+.+...... ..+....+++.
T Consensus 475 -----------------~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~------------------~~~~~~~~~~~ 517 (694)
T PRK15179 475 -----------------DWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMM------------------AQFDARTSDAR 517 (694)
T ss_pred -----------------HHcCCC--hhHEEEECCCcCHHhcCCCchhhHHH------------------HhhccccCCCC
Confidence 112333 67999999999998876543222110 00111113456
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
++|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++|.|+|++.
T Consensus 518 ~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 518 FTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL-----------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred eEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc-----------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 799999999999999999999999988889999999999854 366889999999999999999543
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHHHHHHHHHHH
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG--DQATGILVDFFEK 706 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~--e~lAe~I~~~l~~ 706 (784)
++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|. ++++++|.+++..
T Consensus 584 ---dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 57888885 99999999999999999999999999999999999999999999999998874 6899999877755
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 707 ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+..++ .+++++++++.++|||+.++++++++|+
T Consensus 660 l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 660 CAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 55554 5677899999999999999999999995
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=324.54 Aligned_cols=347 Identities=18% Similarity=0.220 Sum_probs=260.3
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
..||.+.++. +|+++|+++||+|. +++...+. .... ...+++++++++...+.
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAEL----EAEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHH----HhcCCeEEEccccccch-----
Confidence 4599999999 66667799999998 88753211 1111 12245666666543221
Q ss_pred ccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccc
Q 003947 356 ISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKY 435 (784)
Q Consensus 356 isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y 435 (784)
+..+. +...+.+.+. +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 61 ------~~~~~-~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRILL-NVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhHH-HHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 11111 1222333333 45899999999887788888888889999999998643210
Q ss_pred cccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH
Q 003947 436 HFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE 515 (784)
Q Consensus 436 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 515 (784)
.....+..+|.++++|+...+...+ ..+++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 0123467899999999877653221 12333 6799999999999888654322
Q ss_pred HHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCccc
Q 003947 516 KRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 595 (784)
Q Consensus 516 ~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d 595 (784)
..... ..+++++. ++++++++++||+.+.||++.+++++.++++..++++|+|+|+++..
T Consensus 169 ~~~~~--------------~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERIL--------------ALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHHH--------------HHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 11100 01233443 56778999999999999999999999999887789999999998651
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 596 LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 596 ~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1334556678888999999999995 3478999995 99999999 79999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
..|++.++.+|++++++|+++++++|...+ ..+++.+.+++++|++.+.++|+|+.+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999997433 468999999999999999999999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=317.63 Aligned_cols=364 Identities=17% Similarity=0.236 Sum_probs=278.3
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
++|+++|+|.| |.+||.+.++. .|++.|-+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 47999999999 67899999999 78888899999998 999888776553322
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhH--HHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNI--VASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~l--va~llar~~gvp~V~t 412 (784)
+.+.+++.+|+... .+....|-+.....-+...++ .++..|||+|++.+.+ -+...++.+|.+.|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33577888776432 111111111111111222233 3389999999988744 5777889999999999
Q ss_pred ecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 413 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
-|++.... ++....... .++ .++...|.+||+|..-.+++ .....++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll~-----~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LLP-----LSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----eee-----eeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99975432 211111111 122 36788999999997655421 1122344
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
+.|+.+|||.++...|.|.+... .+.+...|+.++||-.+||+|.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 77999999999999999965321 02344779999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 573 l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
+.+..|+++++|+|+||. ...+++..+++.++++|.++| -++.+++.+.+.. .|+|+.||+.|+
T Consensus 220 vc~~~p~vrfii~GDGPk-----------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTEa 283 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK-----------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTEA 283 (426)
T ss_pred HHhcCCCeeEEEecCCcc-----------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHHH
Confidence 999999999999999986 245677788899999999999 7889999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
||++++|||+||+|||+|++||++|++.++ -.......++++++++.+++.++...|. .-.+++.+.|+|+
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSWK 354 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccHH
Confidence 999999999999999999999999999765 2334455789999999999988887764 3456777889999
Q ss_pred HHHHHHHHHHHH
Q 003947 733 IYSERLLNLSGV 744 (784)
Q Consensus 733 ~~a~~ll~ly~~ 744 (784)
..+++.+++|..
T Consensus 355 dVa~rTekvy~r 366 (426)
T KOG1111|consen 355 DVAERTEKVYDR 366 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=325.91 Aligned_cols=287 Identities=18% Similarity=0.187 Sum_probs=213.5
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+|||||+|++.+..+ ..+++..++|+|.+.|+..... ....| .+ .+..++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~-------~~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVW-------DF------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHH-------HH------HHHHHHhCCEEeecHHH
Confidence 45899999998875332 2233334899999999743211 00011 11 12356789999988844
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC--CCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF--PYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 322 1122 3455 999999975322 22111110 1234
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++|
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~---~~~~---~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD---DPEG---WIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC---Cchh---HHHHHHHHHHhCCCCCe
Confidence 4665 67889999999999999999999999999887789999999999652 1111 12344555567788899
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATG 698 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe 698 (784)
.|+|... ++.+++..+++ ++|+||+||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ +.+++++
T Consensus 255 ~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~ 329 (372)
T cd03792 255 HVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAV 329 (372)
T ss_pred EEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHH
Confidence 9998421 36788889888 49999999999999999999999999999999999999999999999987 4567788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+|. +++.|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 330 ~i~----~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RIL----YLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHH----HHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 776 455799999999999999999999999999999999874
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=315.95 Aligned_cols=372 Identities=17% Similarity=0.197 Sum_probs=261.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|........ .....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPL------LVALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccc------hhhcc--
Confidence 6888887765 56799999999 66666799999999 88765322110 00000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t~ 413 (784)
+.......... .... .... ..+... ..........+||+||+|.... ...+..+++..++|++.+.
T Consensus 52 -~~~~~~~~~~~--~~~~-----~~~~---~~~~~~-~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--AYGL-----NLAR---YLFPPS-LLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--hhhh-----hhhh---hccChh-HHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 0000 0000 000001 1111222256899999987443 4566667778899999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+....... ....+ .+....+..+...++.+|.+++++......... +. .
T Consensus 120 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~~--~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKAL------KKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------LG--L 169 (375)
T ss_pred ccccccccc-ccchh------hhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------hC--C
Confidence 986432211 00001 111112223456788899999998766542111 11 2
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|.+.|.+...... ++..+. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 668999999999988876543221 122332 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+.+++++|+++|.+.. .....++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 229 ~~~~~~~~l~i~G~~~~---------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~ 294 (375)
T cd03821 229 AERFPDWHLVIAGPDEG---------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENF 294 (375)
T ss_pred hhhcCCeEEEEECCCCc---------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCC
Confidence 88889999999998754 12344555678899999999999 6777899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|. ++++||+.++++++++++.+.++|||+.
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~----~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALR----RALELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHH----HHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999998 78998875 5589999987 4557999999999999999999999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
++++++
T Consensus 369 ~~~~~~ 374 (375)
T cd03821 369 IAQQLL 374 (375)
T ss_pred HHHHhh
Confidence 999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=309.12 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=223.5
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|+... ...+.+.++..++|++.+.|+...... ... ..++..++.+|.++++|+
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS--PDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc--Cch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 455566666668999999997432110 000 123456889999999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..++..++. .|.. ..++.++|||+|.+.|.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 887632221 1222 678999999999887765430
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
....+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+.+.++++++.++|+
T Consensus 174 ---~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~ 239 (355)
T cd03799 174 ---PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVT 239 (355)
T ss_pred ---cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEE
Confidence 013466789999999999999999999999988778999999999854 356778888889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG 693 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~ 693 (784)
|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|+|+|+.|+..+++.++.+|++++++|+
T Consensus 240 ~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~ 314 (355)
T cd03799 240 LLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDP 314 (355)
T ss_pred ECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCH
Confidence 999 6778899999995 9999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
++++++|.++ ++|++.+.+|+++|++++.++|||+..++++
T Consensus 315 ~~l~~~i~~~----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 315 EALADAIERL----LDDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 9999999854 4799999999999999999999999998763
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=305.70 Aligned_cols=387 Identities=18% Similarity=0.239 Sum_probs=270.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++.+.+ |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997766 33488899999 55666789999999 8876533222111000 011223
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t~ 413 (784)
.++++.+++...... ..+.. .+..+. .|.......+.. ...+||+||++.+.. ...+..+++..++|++.++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~-~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLK--RLLNYL-SFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHH--HHHhhh-HHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 467777777644321 00000 011111 222222333321 256899999997332 4566667777799999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+++............. ...+.+. ...++..++.+|.++++|+...+... ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLL--RKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHH--HHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754321111000000 0000111 12355678999999999988776221 11222
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|...+.+......+ ..... ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432210 11111 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+. ++++|+++|+++. .+.+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|++
T Consensus 246 ~~~-~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~ 307 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPA 307 (394)
T ss_pred hhc-CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCccc
Confidence 876 8899999998854 2445555556665 5799999 6778899999995 9999999998875
Q ss_pred -----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 654 -----GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 654 -----GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
|++++|||+||+|||+|+.||..+++.++.+|++++++|+++++++|.+ +++|++.+++|++++++++.++
T Consensus 308 ~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T cd03794 308 FEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILE----LLDDPEERAEMGENGRRYVEEK 383 (394)
T ss_pred ccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999889999999999999999985 4479999999999999999889
Q ss_pred CCHHHHHHHHH
Q 003947 729 YTWKIYSERLL 739 (784)
Q Consensus 729 ytw~~~a~~ll 739 (784)
|||+.++++++
T Consensus 384 ~s~~~~~~~~~ 394 (394)
T cd03794 384 FSREKLAERLL 394 (394)
T ss_pred hcHHHHHHhcC
Confidence 99999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=300.01 Aligned_cols=374 Identities=22% Similarity=0.316 Sum_probs=271.4
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... |..||...++. .|++.|.+.||+|. +++......... .....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~------~~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDE------EEVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCce------eeecC-
Confidence 6889987765 23589999999 56666788999999 888664332110 00000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
......+... ..........+.......+. ..+||+||++++.........++..++|++.+.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00000011112222222222 44899999999887666557788889999999999
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
......... ...........+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 764332111 000001111234567899999999998877632221 1111 35
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 1110 01111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|++. ..+.+.+.+++++..++|.++| .++.+++..+++. +|++++|+..|++|+
T Consensus 227 ~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~ 290 (374)
T cd03801 227 EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGL 290 (374)
T ss_pred hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhccccc
Confidence 77899999999773 3456677778889999999999 6777899999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+ +++|++.+.+|++++++.+.+.|||+.++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILR----LLDDPELRRRLGEAARERVAERFSWDRVA 366 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999999999999999999999999974 45799999999999999999999999999
Q ss_pred HHHHHHHH
Q 003947 736 ERLLNLSG 743 (784)
Q Consensus 736 ~~ll~ly~ 743 (784)
+++.++|+
T Consensus 367 ~~~~~~~~ 374 (374)
T cd03801 367 ARTEEVYY 374 (374)
T ss_pred HHHHHhhC
Confidence 99999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=334.80 Aligned_cols=293 Identities=17% Similarity=0.222 Sum_probs=232.9
Q ss_pred CCCceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccC----CCCCcchhhhccccc-cccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTK----YPDSDINWKKLDDKY-HFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k----~~~s~~~~~~~~~~y-~~~~~~~~e~~a~~~AD~I 454 (784)
..++||||+|+.. .++++.++++..++|+|+|.|+..... ..........+...+ ++. ...++.+++.||.|
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEE
Confidence 3578999999754 467888889999999999999864311 000000000000000 111 12355678999999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
+++|....+.. ...|++ ..|+.|||||+|.+.|.+.....
T Consensus 249 i~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~~------------------ 288 (475)
T cd03813 249 TTLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRAR------------------ 288 (475)
T ss_pred EecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCccccc------------------
Confidence 99998765411 112443 67999999999998887643210
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
.++++++|+++||+.+.||++.+++|++.+.+..++++|+|+|+++. ..++.++++++++++++
T Consensus 289 ---------~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~-------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 289 ---------PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE-------DPEYAEECRELVESLGL 352 (475)
T ss_pred ---------cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc-------ChHHHHHHHHHHHHhCC
Confidence 13567899999999999999999999999988889999999999853 12456778899999999
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEE
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH------GKSGFHI 688 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d------g~~G~li 688 (784)
.++|+|+| . .++..+++. +|++|+||..|+||++++||||||+|||+|+.||+.|++.+ |.+|+++
T Consensus 353 ~~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 1 357778884 99999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|.|+++++++|.+ +++|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 425 ~~~d~~~la~ai~~----ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 PPADPEALARAILR----LLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999984 5589999999999999999999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=306.93 Aligned_cols=354 Identities=19% Similarity=0.219 Sum_probs=255.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++........ .. ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DE---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hh---hc
Confidence 6899987665 45799999999 66667799999999 88765332111 01 11
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.+..+.+++...... ..+... .....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNVA----------STPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccccc----------cccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 234555554322110 001100 1111111 2256899999998765333333333368899999996
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
..... . .....+. ..++..++.||.|+++|+...+..... ..+..
T Consensus 116 ~~~~~----~----~~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ----K----LLLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc----c----hhhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 42111 0 0011111 124457899999999998765521111 11146
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.+||||+|.+.+.+...... ..... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 8899999999987766432211 00111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCC
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAF 653 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~f 653 (784)
+++|+|+|+|+. .+.+.+.++++++.++|.|+| .++.+++.++++. +|++++||. .|+|
T Consensus 218 ---~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~ 278 (357)
T cd03795 218 ---DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAF 278 (357)
T ss_pred ---CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCccccccc
Confidence 799999999843 356777888899999999999 7778899999995 999999996 6999
Q ss_pred cHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVH-GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~d-g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
|++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+ +++||+.+++|+++|++++.++|||+
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRR----LLEDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999886 899999999999999999985 45799999999999999999999999
Q ss_pred HHH
Q 003947 733 IYS 735 (784)
Q Consensus 733 ~~a 735 (784)
.++
T Consensus 355 ~~~ 357 (357)
T cd03795 355 RMV 357 (357)
T ss_pred hhC
Confidence 864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=303.69 Aligned_cols=333 Identities=16% Similarity=0.162 Sum_probs=236.8
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+++++..++- +.|..||.+.++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876531 3467899999999 55566699999999 88865332110 00
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEec
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H 414 (784)
....+.+... ...............+.+ +.+ ..+|||||+|...+... +++..++|+|.+.|
T Consensus 54 ---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLRL---------DAPGRDRAEAEALALAER-ALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCccc---------ccchhhHhhHHHHHHHHH-HHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0110001000 000000001111112222 222 45899999999887554 57778999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+...... .+ .......++.++++|....+. . .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 8643210 00 113466788899998776541 0 01 1
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578999999999877651 2346789999999999999999999765
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC-CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-CCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK-LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA 652 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~ 652 (784)
.+++|+++|++... +.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|+
T Consensus 196 ---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E~ 256 (335)
T cd03802 196 ---AGIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEEP 256 (335)
T ss_pred ---cCCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccCC
Confidence 36899999999641 22233333332 568999999 6777899999995 999999997 599
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||+
T Consensus 257 ~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~~ 324 (335)
T cd03802 257 FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSAA 324 (335)
T ss_pred cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999986 899999997543 332 346788888999999
Q ss_pred HHHHHHHHHHH
Q 003947 733 IYSERLLNLSG 743 (784)
Q Consensus 733 ~~a~~ll~ly~ 743 (784)
.++++++++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=305.32 Aligned_cols=363 Identities=20% Similarity=0.291 Sum_probs=258.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987664 45589899988 66667799999999 888653321110 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H 414 (784)
....+...+......+ +..+.. ...+.+.+. ..+||+||++.... ++.+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALPP-----RRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eecccc-----hhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222221111110 000000 011122222 44899999986654 56677788889999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+......... ..... ..+. ....+...+.+|.+++.|....+... ... .
T Consensus 116 ~~~~~~~~~~--~~~~~---~~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPL---SWLA--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchH---hHhh--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7643211000 00000 0000 12234567899999999987765110 011 4
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+++||+|.+.|.+....... ++.++ ..++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEAL------------------RARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHH------------------HHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 578999999999888765432211 11222 346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+. ++++|+++|+++.. +.++ +..++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 224 ~~-~~~~l~i~G~~~~~-----------~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~ 280 (364)
T cd03814 224 RR-PPVRLVIVGDGPAR-----------ARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFG 280 (364)
T ss_pred hc-CCceEEEEeCCchH-----------HHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCC
Confidence 77 89999999988541 1121 4567899999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
++++||||||+|||+++.|+..|++.++.+|++++++|.++++++|.+ ++.||+.+++|++++++.+ ++|+|+.+
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA----LLADPELRRRMAARARAEA-ERRSWEAF 355 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-hhcCHHHH
Confidence 999999999999999999999999999899999999999999999974 4579999999999999998 88999999
Q ss_pred HHHHHHHHH
Q 003947 735 SERLLNLSG 743 (784)
Q Consensus 735 a~~ll~ly~ 743 (784)
+++++++|+
T Consensus 356 ~~~~~~~~~ 364 (364)
T cd03814 356 LDNLLEAYR 364 (364)
T ss_pred HHHHHHhhC
Confidence 999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=305.60 Aligned_cols=282 Identities=21% Similarity=0.266 Sum_probs=219.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|...+++.+.++++.. ++|++.+.|+..... .. ..+ ........++.++++|.
T Consensus 77 ~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~------~~~-----~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 77 QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RL------RML-----AYRLTDFLSDLTTNVSK 139 (360)
T ss_pred hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HH------HHH-----HHHHHhhccCceEEEcH
Confidence 4589999999988777666665543 578999999753210 00 001 11223445777888887
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+...+ ..+++ ..++.+||||+|...|.+....... .++.
T Consensus 140 ~~~~~~~~-------------------~~~~~--~~~~~~i~ng~~~~~~~~~~~~~~~-----------------~~~~ 181 (360)
T cd04951 140 EALDYFIA-------------------SKAFN--ANKSFVVYNGIDTDRFRKDPARRLK-----------------IRNA 181 (360)
T ss_pred HHHHHHHh-------------------ccCCC--cccEEEEccccchhhcCcchHHHHH-----------------HHHH
Confidence 65542111 11222 5689999999999887665432221 2234
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
+++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|.
T Consensus 182 ~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~ 248 (360)
T cd04951 182 LGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVK 248 (360)
T ss_pred cCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEE
Confidence 555 5678899999999999999999999999988778999999999864 255777888889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++
T Consensus 249 ~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~ 319 (360)
T cd04951 249 LLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANK 319 (360)
T ss_pred Eeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHH
Confidence 99943 367888885 99999999999999999999999999999999999999977 7999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|.++++ .+++.++.++++ ++.+.++|||+.++++++++|+
T Consensus 320 i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 320 IDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 985542 577777778776 8889999999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=301.85 Aligned_cols=358 Identities=18% Similarity=0.209 Sum_probs=250.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++|++.. |..||.+.++. +|+++|++.||+|. +++...+........ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998653 34699999999 66666799999998 776543221100000 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh---hH---HHHHHHHhCCCcE
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG---NI---VASLLAHKLDVTQ 409 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~---~l---va~llar~~gvp~ 409 (784)
....... ......+ ..+.+.+. ..+||+||++.+.+ .. ......+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0000100 11222222 45899999977432 12 2222234589999
Q ss_pred EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecC
Q 003947 410 CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNG 489 (784)
Q Consensus 410 V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~g 489 (784)
|.+.|+..... . .+ .........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~~----~-~~----------~~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLHE----P-RP----------GDRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCccc----c-ch----------hhhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 99999861100 0 00 0111234568899999999733322 110
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
......++.+||||+|...+.+..... ..+ ...++++|+++|++.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALG--GLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhc--CCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146999999999987665543211 011 14567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
+.++.+..++++|+++|++.... ........++++++++.++|.|+| +.++.+++..+++. +|++++||.
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~------~~~~~~~~~~i~~~~~~~~v~~~~---~~~~~~~~~~~~~~-ad~~v~ps~ 276 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL------ERYRGEAYALAERLGLADRVIFIN---RYLPDEELPELFSA-ADVVVLPYR 276 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch------hhhhhhhHhHHHhcCCCCcEEEec---CcCCHHHHHHHHhh-cCEEEeccc
Confidence 99998888899999999986510 000111114578889999999998 23778899999996 999999999
Q ss_pred CC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003947 650 YE--AFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE 727 (784)
Q Consensus 650 ~E--~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~ 727 (784)
+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+ +++|++.+.+|++++++.+.+
T Consensus 277 ~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~----l~~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 277 SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRR----LLADPELAQALRARAREYARA 351 (366)
T ss_pred ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHhh
Confidence 99 99999999999999999999999 777778889999999999999999974 457999999999999999966
Q ss_pred hCCHHHHHHHHHHHHH
Q 003947 728 KYTWKIYSERLLNLSG 743 (784)
Q Consensus 728 ~ytw~~~a~~ll~ly~ 743 (784)
|||+.+++++.++|+
T Consensus 352 -~s~~~~~~~~~~~~~ 366 (366)
T cd03822 352 -MSWERVAERYLRLLA 366 (366)
T ss_pred -CCHHHHHHHHHHHhC
Confidence 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=302.01 Aligned_cols=363 Identities=17% Similarity=0.177 Sum_probs=263.4
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++.+-.. .||.+.++. .|++.|++.||+|. +++....... .... ..
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~----~~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEEL----EE 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHH----Hh
Confidence 5777764432 389999999 66667789999998 7775422111 1111 11
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H 414 (784)
.++.+..++.... ...+. +...+.+.+. +.+||+||++...+...+...++. .++|.+.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 3466666554321 00111 1112233332 348999999987776666666666 6889999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+...... .+. ...+ ...+....+.+|.++++|....+...+ .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~-----~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLV-----ARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHH-----HHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 010 0111 112345677899999999877652111 1333 6
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.++|||+|...|.+....... .++++++ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARAR-----------------LREELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHH-----------------HHHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 689999999999877665433221 1234555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
+..++++|+++|.+... ........ ++++.++|.|+|.. +++..+++. +|++++||..|+|
T Consensus 220 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~ 281 (365)
T cd03807 220 KKFPNARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGF 281 (365)
T ss_pred HhCCCeEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccC
Confidence 87889999999988641 22333444 78889999999932 367888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.++ ++|++.+.++++++++++.++|+|+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEAL----LADPALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHH----HhChHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999977 89999999999999999854 57999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003947 734 YSERLLNLSG 743 (784)
Q Consensus 734 ~a~~ll~ly~ 743 (784)
+++++.++|+
T Consensus 356 ~~~~~~~~y~ 365 (365)
T cd03807 356 MVEAYEELYR 365 (365)
T ss_pred HHHHHHHHhC
Confidence 9999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=304.68 Aligned_cols=371 Identities=19% Similarity=0.275 Sum_probs=262.6
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++...+ |..||...++. .|+++|+++||+|+ ++|...+..... . ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEE------E---EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCcc------c---cc
Confidence 6888887654 57799999988 66777799999999 888664332110 0 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H 414 (784)
.++...+.+..... .....+... ..+...+. ..+||+||++++.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKYP-------DFRLPLPIP----RALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchhh-------hhhccccHH----HHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 01111111111000 000111111 11111122 45899999988654 55677788889999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchh-hhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQF-TADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
+..... ... ............. ..++..++.||.+++.|+...+...+ .+.
T Consensus 117 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~--------------------~~~--- 168 (374)
T cd03817 117 TMYEDY-THY----VPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE--------------------YGV--- 168 (374)
T ss_pred CCHHHH-HHH----HhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh--------------------cCC---
Confidence 864311 000 0000000000001 23556789999999999876552111 122
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|...+.+......+ +.++. +.++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887765432211 22333 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+..++++|+++|+++. .+.++++++++++.++|.++| .++.+++..+++. +|++++||..|++
T Consensus 228 ~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 88778999999998853 356778888899999999999 6778899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+++.|+..|++.++.+|+++++++. +++++|. +++++++.+++|++++++.+.+ ++
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~----~l~~~~~~~~~~~~~~~~~~~~-~~--- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALL----RLLQDPELRRRLSKNAEESAEK-FS--- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHH----HHHhChHHHHHHHHHHHHHHHH-HH---
Confidence 9999999999999999999999999999999999998887 8888886 5568999999999999999954 44
Q ss_pred HHHHHHHHHHH
Q 003947 734 YSERLLNLSGV 744 (784)
Q Consensus 734 ~a~~ll~ly~~ 744 (784)
.++++.++|+.
T Consensus 363 ~~~~~~~~~~~ 373 (374)
T cd03817 363 FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHhc
Confidence 66677776653
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=307.37 Aligned_cols=347 Identities=14% Similarity=0.154 Sum_probs=246.8
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ........
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~-------~~~~~~~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG-------DYDDEIEK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc-------chHHHHHH
Confidence 678886543 3599999999 55555688999999 887543221 00011112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE-EEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ-CTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~-V~t~H 414 (784)
.++.+++++.... ..+. +...+.+.+. ..+||+||+|+.....++..+++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPLK----YFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHHH----HHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2466666554321 1111 2222222222 45899999999887667777777777775 56677
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
.......... . .... ...+....+.+|.++++|....+..... +. .
T Consensus 113 ~~~~~~~~~~----~----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~~--~ 158 (358)
T cd03812 113 NTSDSHDKKK----K----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---------------------VK--N 158 (358)
T ss_pred cccccccccc----h----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------CC--c
Confidence 6532221100 0 0000 1224456888999999998776521110 11 5
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+....... ++..+. .+++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 689999999999887665432211 112232 567889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||..|+||
T Consensus 219 ~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~ 280 (358)
T cd03812 219 KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLP 280 (358)
T ss_pred HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCCC
Confidence 8889999999999854 3567788889999999999994 3468888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE 727 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~ 727 (784)
++++||||||+|||+|+.||..|++.++ .|++..+++++++|++|.+ +++||+.++.++..+......
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~~~~~~~~~a~~i~~----l~~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTDL-VKFLSLDESPEIWAEEILK----LKSEDRRERSSESIKKKGLDA 348 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEeCCCCHHHHHHHHHH----HHhCcchhhhhhhhhhccchh
Confidence 9999999999999999999999999984 6777777788999999984 558999999888887776533
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=304.87 Aligned_cols=343 Identities=18% Similarity=0.229 Sum_probs=245.0
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999988 56666799999999 7764310
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC--CCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL--DVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~--gvp~V~t 412 (784)
. +.+.+. ..+|||||.|+.....+......+. ++|.|++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 000111 3489999999866644444444444 9999999
Q ss_pred ecCCcccCCC----CCcchhh-h-----cccccc---ccchhhh--hHHHhcccCEEEecChHhHhhccccccccccccc
Q 003947 413 AHALELTKYP----DSDINWK-K-----LDDKYH---FSCQFTA--DLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTA 477 (784)
Q Consensus 413 ~H~l~~~k~~----~s~~~~~-~-----~~~~y~---~~~~~~~--e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~ 477 (784)
+|+....... .....+. . ....+. ...+... .......++.++++|....+-+.+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9987533210 0000000 0 000000 0111110 1111245777888886655421111
Q ss_pred cccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc
Q 003947 478 FSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL 557 (784)
Q Consensus 478 f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL 557 (784)
..++ ..++.++|||+|.+.|.|...... ++.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREA-------------------RKRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHH-------------------HHHhCC--CCCCeEEEEEecC
Confidence 0122 569999999999998876543321 123444 5566777777777
Q ss_pred cC--CCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCC-hhHH
Q 003947 558 DR--VKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVR-NGEL 633 (784)
Q Consensus 558 ~~--~Kgi~~LieA~~~l~~~-~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~-~~el 633 (784)
.. .||++.++++++.+.+. .+++.++++|++... . ..++..+|.|+| .++ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~-----------~-------~~~~~~~v~~~g----~~~~~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE-----------I-------PPDLPFPVHYLG----SLNDDESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh-----------h-------hccCCCceEecC----CcCCHHHH
Confidence 65 89999999999998765 588999999998541 0 014567899999 555 6788
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHH
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGH 713 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~ 713 (784)
..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.++ ++|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l----~~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWL----LADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHH----HhCHHH
Confidence 899995 999999999999999999999999999999999999999999999999999999999999854 479999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 714 WDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 714 ~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+.+|++++++++.++|||+.++++++++|+.
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=312.20 Aligned_cols=388 Identities=11% Similarity=0.071 Sum_probs=255.1
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
...||++++.- . +|.+..+. +++++|+++||+|+ |+|...+.. .+..
T Consensus 2 ~~~~~~~~~~~-~------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLG-D------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEec-c------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 34578887642 1 34455556 56777899999999 888653211 1111
Q ss_pred cCcCCeEEEEccCCC-CcccccccccccCChhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCh---hHHHHHHHHhC
Q 003947 333 YGTKYSDILRVPFRT-EEGIVRKWISRFEVWPYLETFTE---DVATEIIQELQCKPDLIIGNYSDG---NIVASLLAHKL 405 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~-~~~~~~~~isr~~l~~yl~~f~~---~~~~~i~~~~~~~pDIIh~~~~~~---~lva~llar~~ 405 (784)
....++.+++++... ..+.. ..+..+...... .+...+.. ..+||+||+|.+.+ ...+.++++..
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~~ 120 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNKL------PFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLLR 120 (415)
T ss_pred hcCCCEEEEECCCCccccccc------hHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 223468888887653 11100 011112111111 11111222 45899999987554 44566778888
Q ss_pred CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccccee
Q 003947 406 DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYR 485 (784)
Q Consensus 406 gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~ 485 (784)
++|+|++.|+.+..... . .........++.. ..|+..++.||.||++|+...+.+.+
T Consensus 121 ~~~~V~~~h~~~~~~~~-~--~~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~------------------ 177 (415)
T cd03816 121 RTKLIIDWHNYGYTILA-L--KLGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ------------------ 177 (415)
T ss_pred CCeEEEEcCCchHHHHh-c--ccCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh------------------
Confidence 99999999986421100 0 0000001111111 23667889999999999987763221
Q ss_pred eecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHh--hcCch-hhhhhhccccCCCCCEEEEEecccCCCC
Q 003947 486 VVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL--LYSPV-ENKEHLCVLKDSSKPILFTMARLDRVKN 562 (784)
Q Consensus 486 ~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~--l~~~~-~~~~~~gll~~~~k~iIl~vGRL~~~Kg 562 (784)
.|++ ..|+.|||||. ...|.|......+... ... -+.+. ......+. .+++..+++++||+.+.||
T Consensus 178 --~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~ 246 (415)
T cd03816 178 --FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-----LKLAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDED 246 (415)
T ss_pred --hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-----Hhcccccccccccccccee-cCCCceEEEEeccccCCCC
Confidence 2333 77999999994 4567765432211000 000 00000 00001122 1234567888999999999
Q ss_pred hHHHHHHHHHhHc------cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHH
Q 003947 563 LTGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRY 636 (784)
Q Consensus 563 i~~LieA~~~l~~------~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~ 636 (784)
++.|++|+..+++ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| +++.+++..+
T Consensus 247 ~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 247 FGILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 9999999999864 246899999999964 467888999999975445556 6778999999
Q ss_pred HHccccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC---
Q 003947 637 ICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVD--- 710 (784)
Q Consensus 637 la~aadvfV~PS---~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~d--- 710 (784)
|+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|.. +++|
T Consensus 312 l~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~----ll~~~~~ 384 (415)
T cd03816 312 LAS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLID----LLSNFPN 384 (415)
T ss_pred HHh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHH----HHhcCCC
Confidence 995 99999753 35789999999999999999999999999999999999994 89999999985 4467
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 711 PGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 711 p~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
|+.+++|+++|++++ .++|+.-.++.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999996 788887766654
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=310.24 Aligned_cols=269 Identities=16% Similarity=0.202 Sum_probs=202.9
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcE--EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQ--CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~--V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
+.+||+||+|.....+.+.++++..+.|. +.+.|...... ..+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~------------~~~--------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK------------KHA--------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc------------chh--------hhhhhhcCCEEEEcC
Confidence 45899999998766677777777767653 44455321100 000 011247899999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
....+.+. ..|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 87765211 12443 568999999999654432110
Q ss_pred hhccccCCCCCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 539 HLCVLKDSSKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
..+++++++++||+. +.||++.+++++.++. ++++|+|+|+|++ .+.++++++++++.+
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~ 236 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD-----------FEKCKAYSRELGIEQ 236 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc-----------HHHHHHHHHHcCCCC
Confidence 023568899999996 4699999999998874 3799999999964 356788899999999
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGPAEIIVHGKSGFHIDPYKGDQ 695 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~~EiI~dg~~G~li~p~d~e~ 695 (784)
+|.|+|++.+ +.+++..+++. +|++|+||..|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|+++
T Consensus 237 ~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~ 313 (359)
T PRK09922 237 RIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDE 313 (359)
T ss_pred eEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHH
Confidence 9999996543 34678888885 9999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+|++|.++ ++|++.+ +.++......+|+-+.+.+++..+|..
T Consensus 314 la~~i~~l----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 314 FVGKLNKV----ISGEVKY---QHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHHHHHH----HhCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999854 4788744 223333344778888888888888763
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=312.73 Aligned_cols=400 Identities=17% Similarity=0.218 Sum_probs=259.6
Q ss_pred cCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcc
Q 003947 249 GKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQR 328 (784)
Q Consensus 249 ~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~ 328 (784)
++....++|+++.|+.. ..||.+..+++.|++| .++|++++ |+|+|...+. .. .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~-~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDA-SP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCC-CH---HHH
Confidence 45555679999977664 3379999999777776 67788654 4477755321 11 111
Q ss_pred eeeecCcCCeEEEEccCCCCccc-ccccccccCChhhHHHHHHHHHH---HHHHHcCCCceEEEEcCCChhHHHHHHHHh
Q 003947 329 VEKVYGTKYSDILRVPFRTEEGI-VRKWISRFEVWPYLETFTEDVAT---EIIQELQCKPDLIIGNYSDGNIVASLLAHK 404 (784)
Q Consensus 329 ~e~v~~~~~v~IlrvP~~~~~~~-~~~~isr~~l~~yl~~f~~~~~~---~i~~~~~~~pDIIh~~~~~~~lva~llar~ 404 (784)
+.....+-++++.+.+ ..-.+ .++|+. ...|+++.-+.+.+.. .+.......||+++-....+ ....+++.
T Consensus 84 l~~~~~~~~i~~~~~~--~~v~l~~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~pl~~~ 158 (463)
T PLN02949 84 AARARDRFGVELLSPP--KVVHLRKRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTYPLARL 158 (463)
T ss_pred HHHHHhhcceecCCCc--eEEEeccccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHHHHHHh
Confidence 1111222223221100 00000 134554 3345553222222211 11111123566554332211 12233445
Q ss_pred CCCcEEEEecCCcccC------------CCCCc--c--hhhhcc-ccccccchhhhhHHHhcccCEEEecChHhHhhccc
Q 003947 405 LDVTQCTIAHALELTK------------YPDSD--I--NWKKLD-DKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKD 467 (784)
Q Consensus 405 ~gvp~V~t~H~l~~~k------------~~~s~--~--~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~ 467 (784)
.++|+++.+|-..... +.+.. . .+.... ..|+.... ..+....+.||.|+|+|....+.+++
T Consensus 159 ~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~~l~~ 237 (463)
T PLN02949 159 FGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKSHIEA 237 (463)
T ss_pred cCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHHHHHH
Confidence 6899999999432110 00000 0 000000 01111100 13455679999999999887663322
Q ss_pred cccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC
Q 003947 468 TVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 468 ~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.+ +. +.++.+++||+|...+.+.+.. .+++
T Consensus 238 ~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~----------------------------~~~~ 267 (463)
T PLN02949 238 LW-------------------RI---PERIKRVYPPCDTSGLQALPLE----------------------------RSED 267 (463)
T ss_pred Hc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------ccCC
Confidence 21 11 3478899999997655321100 0235
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~----~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+++++++||+.+.||++.+++|++++.+ ..++++|+|+|++... +..++.++++++++++++.++|.|+|
T Consensus 268 ~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~V~f~g- 341 (463)
T PLN02949 268 PPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGDVEFHK- 341 (463)
T ss_pred CCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCcEEEeC-
Confidence 6789999999999999999999998764 2478999999998531 22244577889999999999999999
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHHHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA-EIIVH---GKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~-EiI~d---g~~G~li~p~d~e~lAe~ 699 (784)
.++.+++..+++. ++++|+||.+|+||++++||||||+|||+++.||+. |++.+ |.+|++++ |++++|++
T Consensus 342 ---~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~a 415 (463)
T PLN02949 342 ---NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADA 415 (463)
T ss_pred ---CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHH
Confidence 6778899999996 899999999999999999999999999999999985 77765 67899874 89999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.+..
T Consensus 416 i~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 416 ILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 986542 36888999999999998 779999999999998764
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=313.92 Aligned_cols=278 Identities=17% Similarity=0.114 Sum_probs=193.3
Q ss_pred CCCceEEEEcCCCh---hHHHH------HHHHhCCCcEEEEecCCcccC----CCCCcchhhhcc---cc---c-----c
Q 003947 381 QCKPDLIIGNYSDG---NIVAS------LLAHKLDVTQCTIAHALELTK----YPDSDINWKKLD---DK---Y-----H 436 (784)
Q Consensus 381 ~~~pDIIh~~~~~~---~lva~------llar~~gvp~V~t~H~l~~~k----~~~s~~~~~~~~---~~---y-----~ 436 (784)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... +...-..|+.-. +. | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 55899999998876 33211 112355799999999987542 111001111100 00 0 0
Q ss_pred ccchhh-hh----HHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCC
Q 003947 437 FSCQFT-AD----LFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFP 511 (784)
Q Consensus 437 ~~~~~~-~e----~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p 511 (784)
.+.+.. .. ....+.++.+|+.|...++...+. .. ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~---------------------~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL---------------------YG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH---------------------cC--CCCEEEeCCCcCcccccc
Confidence 000000 00 112345789999998776522111 11 458999999999754333
Q ss_pred CcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc--cCCCChHHHHHHHHHhHccCCCeEEEEEeCCC
Q 003947 512 YMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDR 589 (784)
Q Consensus 512 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL--~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~ 589 (784)
..+.... ..++++++|+++|+. .+.||++.+++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~------------------------~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV------------------------RETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc------------------------ccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111100 003467889999994 47899999999998863 579999999874
Q ss_pred CCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE
Q 003947 590 RKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 669 (784)
Q Consensus 590 ~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIa 669 (784)
.. ...+|.++|... +..++..+|+. +|+||+||..|+||++++||||||+|||+
T Consensus 282 ~~----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVa 335 (405)
T PRK10125 282 PF----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIA 335 (405)
T ss_pred cc----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEE
Confidence 31 024688888543 35688888885 99999999999999999999999999999
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 670 TCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDE----ISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 670 T~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~----m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|+.||++|++.++ +|++++|+|++++|+.+ +++..++ +.+++++++.++|||+.++++|+++|+.
T Consensus 336 t~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 336 THSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred eCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999875 99999999999999754 4444443 3356899998999999999999999974
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=310.35 Aligned_cols=371 Identities=13% Similarity=0.112 Sum_probs=240.6
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcC-CCcccceEEEecCCCCCCC-------CC
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQG-LDITPRILIITRLLPDAVG-------TT 324 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~G-heV~~~i~VvTr~~~~~~g-------~~ 324 (784)
+.|||+|++.-+. |..+|..+.++ .++..|+++| |+|+ |+++..+.... .+
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4599999997766 67899999998 5666789999 7999 99887653211 01
Q ss_pred cCcceee---ecCcCCeEEEEccCCCCccccccccc--ccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHH-
Q 003947 325 CGQRVEK---VYGTKYSDILRVPFRTEEGIVRKWIS--RFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIV- 397 (784)
Q Consensus 325 ~~~~~e~---v~~~~~v~IlrvP~~~~~~~~~~~is--r~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lv- 397 (784)
+....+. +....+-++.|+|..+...+-. +.+ +..+++ ..++.+.+. ..+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~yp~-r~~~~~r~~~~-----~~~i~~~l~---~~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKFYPG-KFSTDKRSILP-----VGDISETIP---DEEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccccCcc-cccccccccCC-----hHHHHHHHH---hcCCCEEEEcCchhhhhHH
Confidence 1111100 0011123455554332211000 000 011111 123333443 34899999998876 554
Q ss_pred -HHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccc
Q 003947 398 -ASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHT 476 (784)
Q Consensus 398 -a~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~ 476 (784)
+..+++++++ +|.+.|+... .|.. ++.. .....+..........-.++|.+++.|....+ .
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~---~~~~-g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l----------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVK---REKN-GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-Y----------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHH---Hhcc-chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-H-----------
Confidence 6667777765 8889998321 1110 0000 00000000000011112358999999974432 0
Q ss_pred ccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC--CCEEEEE
Q 003947 477 AFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS--KPILFTM 554 (784)
Q Consensus 477 ~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~--k~iIl~v 554 (784)
.......++|||.+.|.|....... ..+ .++ .+.++|+
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l~v 234 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAYYI 234 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEEEE
Confidence 1123334589999988776432111 011 122 3578999
Q ss_pred ecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHH
Q 003947 555 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELY 634 (784)
Q Consensus 555 GRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~ 634 (784)
|||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. .+.+
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~----~~~~--- 295 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR----DHAD--- 295 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC----CCHH---
Confidence 999999999999999999987778999999999976 36688899999987555 7773 3333
Q ss_pred HHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHH
Q 003947 635 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHW 714 (784)
Q Consensus 635 ~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~ 714 (784)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.+ .|.+++++++..++. .++
T Consensus 296 ~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~---~~~--- 365 (462)
T PLN02846 296 PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALA---EEP--- 365 (462)
T ss_pred HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHc---cCc---
Confidence 3555 48999999999999999999999999999999998 5999999999998 488999999986552 233
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 715 DEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 715 ~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
..++.+++ +.|||+..+++++++|+.
T Consensus 366 ~~~~~~a~----~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 366 APLTDAQR----HELSWEAATERFLRVADL 391 (462)
T ss_pred hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence 22333322 599999999999999985
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=291.61 Aligned_cols=345 Identities=17% Similarity=0.208 Sum_probs=248.7
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... + .||...++. +|+++|+++||+|+ +++....... . ....
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~-------~--~~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP-------F--YELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------c--cccC
Confidence 6888886654 2 589999988 66666788999999 8886543200 0 0111
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCC-CcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLD-VTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~g-vp~V~t~H 414 (784)
.++.+..++...... +. ..+. +...+.+.+. ..+||+||++... ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~---~~~~----~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LL---ARFK----KLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hh---cccc----chHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 235555554432110 00 0000 1111222222 3589999999877 22223333344 49999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+....... ... ....++..++.+|.+++.|...... . . ....
T Consensus 114 ~~~~~~~~--~~~------------~~~~~~~~~~~~d~ii~~s~~~~~~---~-------------------~--~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLR------------RLLLRRLLYRRADAVVVLTEEDRAL---Y-------------------Y--KKFN 155 (348)
T ss_pred CCccchhh--hhH------------HHHHHHHHHhcCCEEEEeCHHHHHH---h-------------------h--ccCC
Confidence 75432100 000 0002456789999999999876410 0 0 1125
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.++|||++...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998654432 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+..++++|+|+|++.+ .+.+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+||
T Consensus 205 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~~ 266 (348)
T cd03820 205 KKHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGFP 266 (348)
T ss_pred hcCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCccccccC
Confidence 8889999999998865 2456678889999999999993 4588999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 655 LTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+ +++||+.+++|++++++.+ ++|+|+.
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~ 341 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR----LMEDEELRKRMGANARESA-ERFSIEN 341 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-HHhCHHH
Confidence 9999999999999999865 56778888889999999999999999985 4589999999999997655 8999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
+++++.
T Consensus 342 ~~~~~~ 347 (348)
T cd03820 342 IIKQWE 347 (348)
T ss_pred HHHHhc
Confidence 998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=310.17 Aligned_cols=380 Identities=17% Similarity=0.175 Sum_probs=248.2
Q ss_pred EEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHc--CCCcccceEEEecCCCCCCCCCc--Ccceeee
Q 003947 257 VVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQ--GLDITPRILIITRLLPDAVGTTC--GQRVEKV 332 (784)
Q Consensus 257 I~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~--GheV~~~i~VvTr~~~~~~g~~~--~~~~e~v 332 (784)
|+++.|+.. ..||.+..+++.|++| .++ ||+|+ |+|.........-. ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 677766654 3379999999888876 445 88888 99987543210000 0001111
Q ss_pred cCcCCeEEEEcc-CCCCcccccccccccCChhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCc
Q 003947 333 YGTKYSDILRVP-FRTEEGIVRKWISRFEVWPYL---ETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408 (784)
Q Consensus 333 ~~~~~v~IlrvP-~~~~~~~~~~~isr~~l~~yl---~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp 408 (784)
...+++.++++. .+ .|+++ ..|+.+ -.+...+...+......+||||+.+...+.. ..++....++|
T Consensus 61 ~~~~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~-~~~~~~~~~~~ 131 (419)
T cd03806 61 ELDRPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFT-YPLVRLLGGCP 131 (419)
T ss_pred ecCCCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccH-HHHHHHhcCCe
Confidence 112234544442 11 12222 122221 2233333333333224479999988644311 11222234789
Q ss_pred EEEEecCCcccCCCCCc--chh-------------hhcccccccc---chhhhhHHHhcccCEEEecChHhHhhcccccc
Q 003947 409 QCTIAHALELTKYPDSD--INW-------------KKLDDKYHFS---CQFTADLFAMNRTDFIITSTFQEIAGSKDTVG 470 (784)
Q Consensus 409 ~V~t~H~l~~~k~~~s~--~~~-------------~~~~~~y~~~---~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vg 470 (784)
++..+| +++.-.+.- ... +......+.. .....+...++.||.||++|....+.+++..
T Consensus 132 ~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~- 208 (419)
T cd03806 132 VGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW- 208 (419)
T ss_pred EEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh-
Confidence 999999 221000000 000 0000000000 0012567789999999999987766332211
Q ss_pred ccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCE
Q 003947 471 QYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550 (784)
Q Consensus 471 qYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~i 550 (784)
+. ..++.||+||+|.+.|.+.... ...++++
T Consensus 209 ------------------~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~ 239 (419)
T cd03806 209 ------------------KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQ 239 (419)
T ss_pred ------------------Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcE
Confidence 11 2488999999998776543210 0245689
Q ss_pred EEEEecccCCCChHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 551 LFTMARLDRVKNLTGLVEWYGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 551 Il~vGRL~~~Kgi~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... +...+.+.++++++++++.++|.|+|
T Consensus 240 il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g--- 311 (419)
T cd03806 240 ILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVV--- 311 (419)
T ss_pred EEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEec---
Confidence 9999999999999999999999987654 4999999997541 12235677899999999999999999
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHHHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP-AEIIV---HGKSGFHIDPYKGDQATGILV 701 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~---dg~~G~li~p~d~e~lAe~I~ 701 (784)
.++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. +|.+|++++ |++++|++|.
T Consensus 312 -~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~ 387 (419)
T cd03806 312 -NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIE 387 (419)
T ss_pred -CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHH
Confidence 7788999999995 99999999999999999999999999999999886 57887 899999984 8999999998
Q ss_pred HHHHHhcCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 702 DFFEKCKVDP-GHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 702 ~~l~~ll~dp-~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
+++ +++ +.++.+ .++++.+.++|||+.+.+
T Consensus 388 ~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 388 KIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 554 544 445555 555566779999998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=290.43 Aligned_cols=356 Identities=18% Similarity=0.247 Sum_probs=257.5
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777754 378888888 56667789999999 8876532211 1112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHH-hCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH-KLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar-~~gvp~V~t~H 414 (784)
.++.+..+|..... . ..+..+. ....+.+.+. +.+||+||++...+.+.+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35677777764311 0 0111111 1112222222 45899999998877777777776 45567778888
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+........ ... ..+ ....++..++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~-~~~-------~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLK-------RRL--YLLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhH-------HHH--HHHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 764322110 000 000 11235567889999999998876622111 1111 13
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+++||+|...+.+.... .+++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998766543210 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHH-HHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYG-LIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~-li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
+.+++++|+|+|++... ..... .+...+..++|.|+|. .+++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~~ 276 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE-----------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREGL 276 (359)
T ss_pred hcCCCeEEEEEcCCCcc-----------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccCc
Confidence 87889999999998651 01111 3667778889999994 3478888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+ ++.|++.+.++++++++++.++|+|+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~~ 352 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER----LIEDPELRARMGQAARKRAEEEFDEEI 352 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999999999999999999999999974 558999999999999999999999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
++++++
T Consensus 353 ~~~~~~ 358 (359)
T cd03808 353 VVKKLL 358 (359)
T ss_pred HHHHhh
Confidence 999876
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=299.51 Aligned_cols=364 Identities=20% Similarity=0.228 Sum_probs=255.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++.......... ....
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~-----~~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLL-----PLRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccc-----cchh--
Confidence 578887666521 5799999999 66666799999998 7775532211100 0000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.... ..... ....+.............+. ..+||+||+++...... +..++|++.++|+
T Consensus 54 -~~~~---~~~~~---------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRLP---------RRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---ccccc---------cccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 00000 00111111111111111111 35899999998876444 6679999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
+.....+...... ........++..++.+|.++++|+..++.+.+. .+++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCcC--HH
Confidence 7654322211110 000111234567899999999998776632221 1122 56
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.++|||+|...+.+....... .... ..++++|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAEVL--------------------RALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHHHH--------------------HHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 89999999999887665433210 1111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 223 ~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~ 287 (365)
T cd03809 223 KGPDPKLVIVGKRGWL----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGL 287 (365)
T ss_pred hcCCCCEEEecCCccc----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCCC
Confidence 7778999999987541 112223336778899999999 6778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+ +++|++.+.+|++++++.+ ++|||+.++
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIER----LLEDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 9999999999999999999999984 46999999999999999974 5589999999999999765 899999999
Q ss_pred HHHH
Q 003947 736 ERLL 739 (784)
Q Consensus 736 ~~ll 739 (784)
++++
T Consensus 361 ~~~~ 364 (365)
T cd03809 361 RRTL 364 (365)
T ss_pred HHHh
Confidence 9886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=286.93 Aligned_cols=285 Identities=27% Similarity=0.417 Sum_probs=231.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+++... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|+
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 56899999997664 5667778888899999999986543321110 111234457889999999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+...+. +. ...++.++|||+|...+.+...... ++
T Consensus 158 ~~~~~~~~~--------------------~~--~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------GI--DPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------cC--CCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 877622211 11 2678999999999988876543221 01
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+.. .+.+.+.++++++.++|.
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~ 262 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-----------REALEALAAELGLEDRVT 262 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----------hHHHHHHHHhcCCcceEE
Confidence 111 4567899999999999999999999999988788999999998854 245677788889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++++++
T Consensus 263 ~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 337 (377)
T cd03798 263 FLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337 (377)
T ss_pred EeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHH
Confidence 999 7778999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.++ +++++. +++.++++.+.++|+|+.+++++.++++.
T Consensus 338 i~~~----~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 338 ILRL----LADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HHHH----hcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 9854 468776 78899999999999999999999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=290.82 Aligned_cols=353 Identities=16% Similarity=0.197 Sum_probs=244.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68999876653 24689999999 55566689999999 8876533211110 0 0
Q ss_pred CCeEEEEccC--CCCcccccccccccCChhhHH-HHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEE
Q 003947 336 KYSDILRVPF--RTEEGIVRKWISRFEVWPYLE-TFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCT 411 (784)
Q Consensus 336 ~~v~IlrvP~--~~~~~~~~~~isr~~l~~yl~-~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~ 411 (784)
.+..+...+. ......... ......+.. .+...+. .+.+ ..+||+||+|.... .......++..++|++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPRD---LFHLSDYDNPAVVAEFA-RLLE--DFRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchhh---hhHHHhccCHHHHHHHH-HHHH--HcCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 000000000 000000000 1111222 2222 34899999998754 33445566778899999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.+.... +. .......|.++++|+...+...+ .+..
T Consensus 126 ~~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~ 164 (359)
T cd03823 126 TLHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF 164 (359)
T ss_pred EEeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC
Confidence 9998542210 00 01122339999999877652221 1221
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+|+||+|...+.+... + .+.++++|+++|++.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~--~~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------A--PPGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------C--CCCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999987654321 0 1356788999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-C
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-Y 650 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 650 (784)
++.+ ++++|+++|.+... ....... +..++|.++| .++.+++..+++. +|++++||. .
T Consensus 215 ~l~~--~~~~l~i~G~~~~~-----------~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~ 273 (359)
T cd03823 215 RLPR--GDIELVIVGNGLEL-----------EEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWP 273 (359)
T ss_pred HHHh--cCcEEEEEcCchhh-----------hHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCccc
Confidence 9877 78999999998641 1111111 5678999999 6778899999995 999999997 7
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.++ ++|++.++++++++++++..
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l----~~~~~~~~~~~~~~~~~~~~--- 346 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERL----IDDPDLLERLRAGIEPPRSI--- 346 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHH----HhChHHHHHHHHhHHHhhhH---
Confidence 99999999999999999999999999999999999999999999999999854 46999999999999887633
Q ss_pred HHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSG 743 (784)
Q Consensus 731 w~~~a~~ll~ly~ 743 (784)
+.++++++++|+
T Consensus 347 -~~~~~~~~~~~~ 358 (359)
T cd03823 347 -EDQAEEYLKLYR 358 (359)
T ss_pred -HHHHHHHHHHhh
Confidence 999999999885
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=309.37 Aligned_cols=284 Identities=15% Similarity=0.147 Sum_probs=205.3
Q ss_pred CCCceEEEEcCCChhHHHHHHH-HhCCCcEEEEecCCcccCCCCCc--chhhhccccccc--cchhhhhHHHhcccCEEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLA-HKLDVTQCTIAHALELTKYPDSD--INWKKLDDKYHF--SCQFTADLFAMNRTDFII 455 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~V~t~H~l~~~k~~~s~--~~~~~~~~~y~~--~~~~~~e~~a~~~AD~II 455 (784)
..++|+||+++.... ..+. +..++|.|.+.|+++...+.... ..+. ....|+. ......|+..++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 468999999875432 2222 35689999999986532211000 0000 0001110 001124677889999999
Q ss_pred ecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 456 TSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 456 t~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
++|+.+++...+. .+.. ..++.+||||+|.+.|.|......
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~~--~~~v~vipngvd~~~f~~~~~~~~------------------ 218 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APEA--AGRITAFPNGVDADFFSPDRDYPN------------------ 218 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCCC--CCCeEEeecccchhhcCCCccccC------------------
Confidence 9999887632221 1111 468999999999988866432110
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHH----HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT 611 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~ 611 (784)
.. .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 219 -----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------------~~----~~~ 275 (397)
T TIGR03087 219 -----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------------PA----VRA 275 (397)
T ss_pred -----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------------HH----HHH
Confidence 01 34568999999999999999988 55666766779999999999854 11 233
Q ss_pred cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC
Q 003947 612 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP 690 (784)
Q Consensus 612 l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p 690 (784)
++..++|+|+|.. + ++..+++. +|++|+||. .||+|++++||||||+|||+|+.|+. .+...+.+|++++
T Consensus 276 l~~~~~V~~~G~v----~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSV----A--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeec----C--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 4455789999943 3 57888885 999999997 69999999999999999999987643 3334455799986
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|++++|++|.+ +++||+.+++|+++|++++.++|||+.+++++.+++.
T Consensus 347 ~~~~~la~ai~~----ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 ADPADFAAAILA----LLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 899999999974 5589999999999999999999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=284.13 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=213.1
Q ss_pred CCceEEEEcCC-ChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYS-DGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~-~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||++.. .+.+.+.+.++. ++|.+.+.|+............ . ..+...++.+|.+++.|..
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRL-------L------LLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhH-------H------HHHHhhccccceEEEeccc
Confidence 48999999988 555555555544 8999999998754321110000 0 2345678999999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++...+. .+.+ ..++.+||||+|.+.+.+...... ..
T Consensus 146 ~~~~~~~~-------------------~~~~--~~~~~vi~~~~~~~~~~~~~~~~~---------------------~~ 183 (353)
T cd03811 146 VKEDLLKL-------------------LGIP--PDKIEVIYNPIDIEEIRALAEEPL---------------------EL 183 (353)
T ss_pred hhhhHHHh-------------------hcCC--ccccEEecCCcChhhcCcccchhh---------------------hc
Confidence 76522211 1111 468999999999987765433211 01
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
+. +.++++|+++||+.+.||++.+++++.++.+.+++++|+++|+++. .+.+.+.++++++.++|.|
T Consensus 184 ~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 250 (353)
T cd03811 184 GI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----------REELEALAKELGLADRVHF 250 (353)
T ss_pred CC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEE
Confidence 11 4577899999999999999999999999988788999999998854 2456688899999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
.|.. +++..+++. +|++++||..|++|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+
T Consensus 251 ~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 251 LGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred eccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9943 257788885 999999999999999999999999999999999999999999999999999999986555
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 701 ~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
..+ ..+..+++.+.++++++++.+.++|+
T Consensus 324 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 324 LAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 433 47889999999999999999988886
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=304.23 Aligned_cols=280 Identities=20% Similarity=0.224 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCc--chhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSD--INWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~--~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
..++||+|++.+.....+ ++.....+|.+.++|+-+........ ..|. ..|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999776643333 44556689999999985432211110 1121 11111 122467789999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
+..++.+.+..++| +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87766444433222 111 56899999998754433210
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.+++..|+++||+.+.||++.+++|++++.+..|+++|+|+|+|+. .+.++++++++++.++|
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~~~V 378 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-----------KQKLQKIINENQAQDYI 378 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2344689999999999999999999999998889999999999843 36788999999999999
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC-
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDP----YK- 692 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p----~d- 692 (784)
.|+| .. ++..+++ .+|++|+||..||||++++||||||+|||+|+.+ |++|+|.+|.+|+++++ .|
T Consensus 379 ~f~G----~~---~~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~ 450 (500)
T TIGR02918 379 HLKG----HR---NLSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDE 450 (500)
T ss_pred EEcC----CC---CHHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccch
Confidence 9999 33 3455666 4999999999999999999999999999999986 89999999999999984 33
Q ss_pred ---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 ---GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ---~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++|++|. +++ +++.+++|+++|++.+ ++|||+.+++++.++++.
T Consensus 451 ~~~~~~la~~I~----~ll-~~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 451 DQIITALAEKIV----EYF-NSNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hHHHHHHHHHHH----HHh-ChHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 677777776 445 4557999999999976 889999999999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=293.67 Aligned_cols=276 Identities=15% Similarity=0.216 Sum_probs=217.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCc-EEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVT-QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp-~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
..++|++|++.... +..+.+++++.+.+ +|.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46789999866554 44555677777766 899999753211 00111111 11234578999999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
....+.+.+.. +. ...++.+++||++...+.+..
T Consensus 192 ~~~~~~l~~~~-------------------~~--~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY-------------------PA--YKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC-------------------CC--ccccEEEEECCcccccccCCC-------------------------
Confidence 98876333221 12 256899999999986554320
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~--~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
..++++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..+
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~~~~ 289 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKPENI 289 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcCCCc
Confidence 03456889999999999999999999999988765 567788998843 356777888888889
Q ss_pred cEEEccCcCCcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPY-KGD 694 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~-d~e 694 (784)
+|.|+| .++.+++.++++. .+|+||.||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |++
T Consensus 290 ~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHH
Confidence 999999 7778899999974 3789999999999999999999999999999999999999999999999874 899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
+++++|.++ ++||+.+++|+++|+++++++|||+...+++.
T Consensus 366 ~la~~I~~l----l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKF----IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999999854 46999999999999999999999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=279.15 Aligned_cols=316 Identities=12% Similarity=0.048 Sum_probs=211.5
Q ss_pred HHHHHHHcCC-CcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChh---hHHHH--
Q 003947 295 MLLRIKQQGL-DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWP---YLETF-- 368 (784)
Q Consensus 295 La~~L~~~Gh-eV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~---yl~~f-- 368 (784)
++.+++++|| +|+ |+|...+ + .........+++++|+|. .... . +...++. |+...
T Consensus 24 ~~~~l~~~~~~~v~----vi~~~~~---~-----~~~~~~~~~~v~v~r~~~-~~~~--~---~~~~~~~~~~~~~~~~~ 85 (371)
T PLN02275 24 HALSLARQASFQVD----VVAYGGS---E-----PIPALLNHPSIHIHLMVQ-PRLL--Q---RLPRVLYALALLLKVAI 85 (371)
T ss_pred HHHHHHhcCCceEE----EEEecCC---C-----CCHHHhcCCcEEEEECCC-cccc--c---ccccchHHHHHHHHHHH
Confidence 5566788886 698 8874321 1 111122334699999985 2210 0 0111222 22211
Q ss_pred -HHHHHHHHHHHcCCCceEEEEcCCCh---hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhh
Q 003947 369 -TEDVATEIIQELQCKPDLIIGNYSDG---NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTAD 444 (784)
Q Consensus 369 -~~~~~~~i~~~~~~~pDIIh~~~~~~---~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e 444 (784)
...+...+.. ...+||+||+|.+.+ .+.+.++++..++|+|++.|+++....... ........++.. ..+
T Consensus 86 ~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~~~--~~e 159 (371)
T PLN02275 86 QFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRLYR--WYE 159 (371)
T ss_pred HHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHHHH--HHH
Confidence 1112222111 256999999987554 456777888889999999998642110000 000001111111 236
Q ss_pred HHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchh
Q 003947 445 LFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHS 524 (784)
Q Consensus 445 ~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~ 524 (784)
+..++.||.||++|+...+...+. .|+ ++.+|+||+ .+.|.|......
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------- 207 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------- 207 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc-------
Confidence 678999999999998877632111 122 278999994 456655432110
Q ss_pred hhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH-----------------ccCCCeEEEEEeC
Q 003947 525 EIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA-----------------KLRELVNLVVVGG 587 (784)
Q Consensus 525 ~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~-----------------~~~~~v~LvIVG~ 587 (784)
+ ..+.+.+++++||+.+.||++.+++|+..+. +..++++|+|+|+
T Consensus 208 -----------------~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~ 269 (371)
T PLN02275 208 -----------------L-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGK 269 (371)
T ss_pred -----------------c-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeC
Confidence 0 0223457889999999999999999998874 2357899999999
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC---CCCCCcHHHHHHHHcC
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCG 664 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMA~G 664 (784)
|+. .++++++++++++.+ +.|++ ..++.+++..+|+. +|++|.|+ ..|+||++++||||||
T Consensus 270 G~~-----------~~~l~~~~~~~~l~~-v~~~~---~~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G 333 (371)
T PLN02275 270 GPQ-----------KAMYEEKISRLNLRH-VAFRT---MWLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCG 333 (371)
T ss_pred CCC-----------HHHHHHHHHHcCCCc-eEEEc---CCCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCC
Confidence 965 367889999999976 88765 14678899999995 99999863 2489999999999999
Q ss_pred CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 003947 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 665 lPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
+|||+|+.||.+|+|++|.+|++++ |++++|++|.+
T Consensus 334 ~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~ 369 (371)
T PLN02275 334 LPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLE 369 (371)
T ss_pred CCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHH
Confidence 9999999999999999999999996 68999999864
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=277.57 Aligned_cols=264 Identities=20% Similarity=0.257 Sum_probs=190.3
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcc------hhhhccccccccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDI------NWKKLDDKYHFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~------~~~~~~~~y~~~~~~~~e~~a~~~AD~I 454 (784)
..++|+||++.... +..+.+..++|.+..+|+.....+...+. .+......+........+...++++|.|
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999876532 22222556788888888632111110000 0000000000011112345668999999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
+++|+..++...+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999887632211 134568999999987665421
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +.
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~-----------~~~l~~-----~~ 240 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE-----------LDRLRA-----KA 240 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh-----------HHHHHh-----hc
Confidence 23457899999999999999999998763 78999999853 122222 45
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
.++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|++
T Consensus 241 ~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~ 314 (351)
T cd03804 241 GPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVE 314 (351)
T ss_pred CCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHH
Confidence 68999999 7778899999995 999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
+++++|..+ ++|++ .+++++++++ ++|+|+.+.+++
T Consensus 315 ~la~~i~~l----~~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 315 SLAAAVERF----EKNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHH----HhCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 999999754 46773 2344455555 679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=275.94 Aligned_cols=273 Identities=21% Similarity=0.243 Sum_probs=211.2
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCC-cchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS-DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.++|+||++....... .++......+.+.++|+......... ...|+. .+. .....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhH------HHHhChhhCCEEEEccHH
Confidence 6899999987765333 23444455677889997543221110 011111 111 111236789999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++.+.+..+ . ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHhC-------------------C---CCceEEEcccccChhhcccch--------------------------
Confidence 7764332211 1 235889999999876655320
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
...+++.++++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+...++++++.++|.+
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 265 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-----------EEKLKELIEELGLEDYVFL 265 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-----------HHHHHHHHHHcCCcceEEE
Confidence 02356789999999999999999999999998889999999999854 2456677788999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
.|+. +++.++++. +|++|.||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++|++
T Consensus 266 ~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~ 338 (372)
T cd04949 266 KGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEA 338 (372)
T ss_pred cCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHH
Confidence 9943 357888885 999999999999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
|.. +++|++.+++|++++++.+ ++|||+.+++++
T Consensus 339 i~~----ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 339 IIE----LLNDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHH----HHcCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 985 4589999999999999995 999999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=277.64 Aligned_cols=437 Identities=16% Similarity=0.161 Sum_probs=289.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec-
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY- 333 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~- 333 (784)
|||+.++....|- -++||....+- .|.+.|++.|++|. |+.+.++.... .+....+.+.
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~~-~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQK-EWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhhh-hhccccceeeE
Confidence 7899988877642 47899988888 45556799999999 88888773222 2222111110
Q ss_pred ------CcCCeEEEEccCCC--Ccc-cc--ccccccc--CChh------hHHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003947 334 ------GTKYSDILRVPFRT--EEG-IV--RKWISRF--EVWP------YLETFTEDVATEIIQELQ--CKPDLIIGNYS 392 (784)
Q Consensus 334 ------~~~~v~IlrvP~~~--~~~-~~--~~~isr~--~l~~------yl~~f~~~~~~~i~~~~~--~~pDIIh~~~~ 392 (784)
+.....+....... .+- ++ ...-+|. ..+. ....|...++..+ .... ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~-~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELA-PLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHh-hhcCCCCCCCEEEeecH
Confidence 00111111111100 000 00 1111221 1111 2233443333333 2212 47999999999
Q ss_pred ChhHHHHHHHHh----CCCcEEEEecCCcccCCCC-Ccchhhhccc-ccc-----ccchhhhhHHHhcccCEEEecChHh
Q 003947 393 DGNIVASLLAHK----LDVTQCTIAHALELTKYPD-SDINWKKLDD-KYH-----FSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 393 ~~~lva~llar~----~gvp~V~t~H~l~~~k~~~-s~~~~~~~~~-~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
..++++.+++.. ..+|.|+|+|++....... ....+..+.. .|. +-.+....+-.+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986433211 1111111110 111 1122334566789999999999988
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC 541 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 541 (784)
+.... ...|. ..+-++.+ ....++.-|-||+|.+.+.|.++......-.........-+.....+++|
T Consensus 220 a~Ei~--t~~~g----~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIY--TPEYG----EGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhc--ccccc----ccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 77443 11221 11222211 12458899999999999999876532211111111124445667788899
Q ss_pred cccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEc
Q 003947 542 VLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621 (784)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~fl 621 (784)
+..+.+.|++.++||+..+||++.+++++..+.+.. +++++.|.|.. ...+.+..+++.+.. ++...
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH---------HHHHHHHHHHHhcCc--eEEEE
Confidence 866678899999999999999999999999998754 99999999933 345677888887764 44433
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCH
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH--------GKSGFHIDPYKG 693 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d--------g~~G~li~p~d~ 693 (784)
- ..+. .+.+.+...+|++++||++|+||++-++||..|+++|+...||.++.|.+ ..+|+.+.+.++
T Consensus 355 i----~~~~-~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GYDE-PLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----eecH-HHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 2 2233 44444444699999999999999999999999999999999999999986 469999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
++++.+|..++.-....+..|+.+..++.. .+|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999885444444549999888887 6899999999999999964
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=269.92 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=189.2
Q ss_pred EcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHH-hcccCEEEecChHhHhhccc
Q 003947 389 GNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFA-MNRTDFIITSTFQEIAGSKD 467 (784)
Q Consensus 389 ~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~ 467 (784)
.|....++..+...++.|+|+++++|+... ... ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISH--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhH--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 444444556666666778999999997210 000 112334 67899999999888763211
Q ss_pred cccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC
Q 003947 468 TVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 468 ~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999999877654210 124
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+.+++++|++.+.||++.|++|++++.+..++++++++|++... .++ .++.+ +.| .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-----------~~l------~~~~~---~~~----~ 197 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-----------PRL------FGLNG---VKT----P 197 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-----------hhh------ccccc---eec----c
Confidence 45777888999999999999999999887889999999976431 011 12222 233 5
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-----------------
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP----------------- 690 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p----------------- 690 (784)
++.+++..+|+. +|+||+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 198 v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 198 LPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred CCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred --CCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 691 --YKGDQATGILVDFFEKCKVD--PGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 691 --~d~e~lAe~I~~~l~~ll~d--p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
.|.+++++++.+.+ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 277 v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 277 LDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred cCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26778888887544 44 24445555555555679999999999999999754
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=273.37 Aligned_cols=275 Identities=11% Similarity=0.119 Sum_probs=194.8
Q ss_pred CCCceEEEEcCCCh-hHH--HHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIGNYSDG-NIV--ASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lv--a~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+|||||.+.+.. ++. |..+|++++ |+|.++|+.... |... + .......+..+.......-.+||.|++.
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~--y--~~g~L~~~llk~l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKR--E--KNGALQAFFVKHINNWVTRAYCHKVLRL 505 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhH--h--cchhHHHHHHHHHHHHHHHhhCCEEEcC
Confidence 45899999998876 666 888999999 999999986432 1100 0 0000000000000011111128999999
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENK 537 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~ 537 (784)
|..... + . ...+..| ||||++.|.|......+
T Consensus 506 S~atq~-------------------L-------~--~~vI~nV-nGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-------------------L-------P--KSVICNV-HGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-------------------h-------c--ccceeec-ccccccccCCcchhHHH-------------------
Confidence 965542 0 0 1112222 69999999887553321
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
..+|. ....+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+.+++++.++++ +
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~ 602 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--N 602 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--E
Confidence 12343 2233458999999999999999999999887778999999999975 3567888888887 4
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
|.|+|.+. +...+|+ ++|+||+||..|+||++++||||||+|||+|+.||. +++.++.+|+.+ +|.++++
T Consensus 603 V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafA 672 (794)
T PLN02501 603 LNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFV 672 (794)
T ss_pred EEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHH
Confidence 89999433 2346777 499999999999999999999999999999999985 447778788865 6899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++|.+++ .|+..+..+++ ...|||+..++++++....
T Consensus 673 eAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 673 AKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 9998554 56654433322 2489999999999998764
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=263.44 Aligned_cols=335 Identities=16% Similarity=0.151 Sum_probs=208.5
Q ss_pred CCCceEEEEcCCChhHHHHHHH-HhCCCcEEEEecCCcccCCCCC---cch-------hhhccccccccchhhhhHHHhc
Q 003947 381 QCKPDLIIGNYSDGNIVASLLA-HKLDVTQCTIAHALELTKYPDS---DIN-------WKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~V~t~H~l~~~k~~~s---~~~-------~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.....+... +++ +.....+..+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999888888 5678999999998876553211 111 1111112233344456889999
Q ss_pred ccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHh
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 529 (784)
.||.++|+|..+....+..+ +.+ +++ |||||+|.+.|.+..+........+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999999887554432 222 334 9999999999887654322111111111111
Q ss_pred hcCchhhhhhhccccCCCCCEEEE-EecccC-CCChHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCcc-cHHHH
Q 003947 530 LYSPVENKEHLCVLKDSSKPILFT-MARLDR-VKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKESK-DLEEQ 599 (784)
Q Consensus 530 l~~~~~~~~~~gll~~~~k~iIl~-vGRL~~-~Kgi~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~s~-d~ee~ 599 (784)
.....+.++++ ++++++++| +||++. .||++.+|+|++++... ..+ +-|+|+=++...-.. .....
T Consensus 283 --~~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 --VRGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred --HHHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 11123455665 667777766 899998 99999999999988641 222 334444333110000 00000
Q ss_pred HH-------H------------------------------------------------------------HHHHHHHHhc
Q 003947 600 AE-------M------------------------------------------------------------KKMYGLIDTY 612 (784)
Q Consensus 600 ~~-------~------------------------------------------------------------~~l~~li~~l 612 (784)
+. + +.+...+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 00 0 1111222223
Q ss_pred CCC----Cc--EEEcc---CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003947 613 KLN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEII 679 (784)
Q Consensus 613 ~L~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI 679 (784)
+|- ++ |.|.+ ..+|.+-..+.+++++ .+|++|+||++|+||++++||||||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 332 22 44444 1122333445777777 499999999999999999999999999999999999 5666
Q ss_pred ccC-ceEEEECCCC---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003947 680 VHG-KSGFHIDPYK---GDQATGILVDFFEKCKVDPGHWDEISQGGL-KRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 680 ~dg-~~G~li~p~d---~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~-~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.++ ..|+.+.+.+ ..+.++.|.+++.++.+. +.++++.++++ ++..+.|+|+.+++.|.+.|..
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 554 3577776322 233333444444444444 56777777665 3444899999999999998863
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-26 Score=250.39 Aligned_cols=343 Identities=13% Similarity=0.085 Sum_probs=232.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+|++. .+||.+.... +|+++|.++||+|+ ++|..... . ....+
T Consensus 2 ~~i~i~~~-------------g~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~---- 47 (357)
T PRK00726 2 KKILLAGG-------------GTGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVP---- 47 (357)
T ss_pred cEEEEEcC-------------cchHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhccc----
Confidence 89888852 1367777666 66777899999999 88864211 0 01111
Q ss_pred cCCeEEEEccCCCCccccccccccc-CChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEe
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRF-EVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~-~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~ 413 (784)
..++++++++.....+-. ..++. ..+.++.. ...+.+.+. ..+|||||+|.+.+++.+.++++..++|+|++.
T Consensus 48 ~~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 48 KAGIEFHFIPSGGLRRKG--SLANLKAPFKLLKG-VLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred cCCCcEEEEeccCcCCCC--hHHHHHHHHHHHHH-HHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 135777887764321100 00000 01111111 111222222 458999999998777888888888999999876
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+... . ..+++.++.+|.+++++++... . .+
T Consensus 122 ~~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~~-- 152 (357)
T PRK00726 122 QNAVP-----------G-----------LANKLLARFAKKVATAFPGAFP---------------------E----FF-- 152 (357)
T ss_pred CCCCc-----------c-----------HHHHHHHHHhchheECchhhhh---------------------c----cC--
Confidence 64311 0 1134467789999998864321 0 12
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHH-HHHHH
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLV-EWYGK 572 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~Li-eA~~~ 572 (784)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6799999999998765542211 12333 45678889999988888876555 89888
Q ss_pred hHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 573 l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
+.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+++. +|++|.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g--- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG--- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC---
Confidence 8653 3 56778898842 33444445 6664 9999954 468888885 999998762
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGG--------PAEIIVHGKSGFHIDPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG--------~~EiI~dg~~G~li~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+.+++|||+||+|+|++..++ ..+.+.+..+|++++++| +++++++|. ++++|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~----~ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL----ELLSDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH----HHHcCHHHHHHHHHHHH
Confidence 689999999999999987653 235677777999999888 899999987 55689999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ly~ 743 (784)
++. +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 986 89999999999988754
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=257.80 Aligned_cols=324 Identities=14% Similarity=0.071 Sum_probs=217.4
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHh
Q 003947 370 EDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAM 448 (784)
Q Consensus 370 ~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~ 448 (784)
...+..+... -...|+|+.|++...+++.++.++ .+.|+++..|..++ .+.. |..+ .....-...+
T Consensus 119 ~~fa~~i~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP----~~e~-~~~l-------p~~~~ll~~~ 185 (460)
T cd03788 119 RKFADAIAEV-LRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCL-------PWREELLRGL 185 (460)
T ss_pred HHHHHHHHHh-cCCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHH-HhhC-------CChHHHHHHH
Confidence 3344444443 235799999999887777777654 35889999997542 2221 1111 1111112357
Q ss_pred cccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHH
Q 003947 449 NRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528 (784)
Q Consensus 449 ~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~ 528 (784)
-.+|.|.+.+........+.....-... .+. .......|. ..++.++|||||.+.|.+.........
T Consensus 186 l~~D~igF~t~~~~~~Fl~~~~~~l~~~-~~~-~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~-------- 252 (460)
T cd03788 186 LGADLIGFQTERYARNFLSCCSRLLGLE-VTD-DGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQE-------- 252 (460)
T ss_pred hcCCEEEECCHHHHHHHHHHHHHHcCCc-ccC-CceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHH--------
Confidence 7799999998765442222110000000 000 000111111 347899999999988865422111000
Q ss_pred hhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHHHHHHH
Q 003947 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKK 604 (784)
Q Consensus 529 ~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~~~~~~ 604 (784)
..++..+. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++... ...+.....+.
T Consensus 253 ------~~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g--~~~~~~~l~~~ 322 (460)
T cd03788 253 ------RAAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT--DVPEYQELRRE 322 (460)
T ss_pred ------HHHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc--CcHHHHHHHHH
Confidence 00111222 45788999999999999999999999998877675 679999865321 12233345556
Q ss_pred HHHHHHhcCCC------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccc
Q 003947 605 MYGLIDTYKLN------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCNGG 674 (784)
Q Consensus 605 l~~li~~l~L~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----VIaT~~GG 674 (784)
+.+++++.+.. ..|.+++ +.++.+++..+|+. +|+||+||..||||++++||||||+| ||+|+.+|
T Consensus 323 l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G 398 (460)
T cd03788 323 VEELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG 398 (460)
T ss_pred HHHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEecccc
Confidence 66666654421 2355553 26778999999995 99999999999999999999999999 99999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
..+. +.+|++++|.|++++|++|.++++ ++++.++.+++++++++ ++|||+..+++++.
T Consensus 399 ~~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 399 AAEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred chhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 8887 467999999999999999986542 45688899999999998 78999999999875
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-25 Score=240.05 Aligned_cols=224 Identities=14% Similarity=0.142 Sum_probs=167.7
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhh
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEI 526 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~ 526 (784)
.|.+.+.+|++|...++...+ .|++ . .+ +|+||+|.+.|.|......++
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~------- 137 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQL------- 137 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHH-------
Confidence 466677899999877763221 2343 2 23 478999999988754221111
Q ss_pred HHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHHHHH
Q 003947 527 EELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 602 (784)
Q Consensus 527 ~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~~~~ 602 (784)
+++++.. .++.++|+++||+.+.||++.|++|++++.+..++ ++++++|++
T Consensus 138 ----------r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 138 ----------KQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----------HHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 1223321 24678899999999999999999999999876654 578887632
Q ss_pred HHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003947 603 KKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH- 681 (784)
Q Consensus 603 ~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d- 681 (784)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||..|+||++++||||||+|||+|+.||++|++.+
T Consensus 193 -----~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred -----HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 134567888999996322 5567899999995 99999999999999999999999999999999999997441
Q ss_pred ---------------C--ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 682 ---------------G--KSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 682 ---------------g--~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
+ ..||.+++.|++++|++|..+++ ..+++. .+.++++++ ++|+|+.++++++
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2 25778999999999999987653 234443 366777776 9999999999886
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=238.44 Aligned_cols=324 Identities=12% Similarity=0.107 Sum_probs=220.7
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
.+||...++. .|++.|.++||+|+ |+|...... .+ .....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------AR-LVPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hh-cccccCCceEEEEecCcCC-----
Confidence 4588888777 66777899999999 888653210 01 1112357788887643211
Q ss_pred ccccCChhhHHHH------HHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhh
Q 003947 356 ISRFEVWPYLETF------TEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWK 429 (784)
Q Consensus 356 isr~~l~~yl~~f------~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~ 429 (784)
...+..+..+ ...+.+.+. +.+||+||+|....++.+.++++..++|+++..|+..+
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 1111111111 111222222 45899999998777777788889999999875554211
Q ss_pred hccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCC
Q 003947 430 KLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY 509 (784)
Q Consensus 430 ~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f 509 (784)
. ..+++.++.+|.|++.|+...+ + +. +.++.+++||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~--------------------~-----~~--~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAK--------------------Y-----FP--KDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhh--------------------c-----CC--CCcEEEECCCCchHHh
Confidence 0 0123456779999999987654 0 11 5689999999998766
Q ss_pred CCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHH-HHHHHHHhHccCCCeEE-EEEeC
Q 003947 510 FPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNL-VVVGG 587 (784)
Q Consensus 510 ~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~~~~~v~L-vIVG~ 587 (784)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54321 123454 567788888887766777654 5588888763 45664 46676
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcE
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 667 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPV 667 (784)
+ . .+++.+.++++ .++|.+.|++ +++..+|+. +|++|.++- +++++|||+||+|+
T Consensus 221 g-~-----------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 221 G-D-----------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred c-c-----------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 6 2 24455666665 4789999943 478888885 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 668 FATCNGG--------PAEIIVHGKSGFHIDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 668 IaT~~GG--------~~EiI~dg~~G~li~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
|+++.++ ..+.+.++.+|++++++ |+++++++|.+ +++|++.+++|++++++++ +.+.-+++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLE----LLSDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 9987654 24667777799999987 89999999975 4479999999999999887 5676666553
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=236.27 Aligned_cols=315 Identities=14% Similarity=0.108 Sum_probs=206.0
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHH---HHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLE---TFTE 370 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~---~f~~ 370 (784)
.|+++|.++||+|+ ++|+..... ... ....++++.+++.....+ .+......... ....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 57788899999999 888532110 010 111357777777643211 00001111111 1111
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNR 450 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 450 (784)
.+.+.+. +.+||+||+|....++.+.++++..++|+|...|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 2222222 45899999998777777788888899998754332110 0 013456778
Q ss_pred cCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhh
Q 003947 451 TDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELL 530 (784)
Q Consensus 451 AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l 530 (784)
+|.+++.|+.+.+ .-+..+|+||+|...+.+...
T Consensus 136 ~d~ii~~~~~~~~------------------------------~~~~~~i~n~v~~~~~~~~~~---------------- 169 (348)
T TIGR01133 136 AKKVLISFPGAKD------------------------------HFEAVLVGNPVRQEIRSLPVP---------------- 169 (348)
T ss_pred hCeeEECchhHhh------------------------------cCCceEEcCCcCHHHhcccch----------------
Confidence 9999999987654 013378999998765543211
Q ss_pred cCchhhhhhhccccCCCCCEEEEEecccCCCChHH-HHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 531 YSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 531 ~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.+++ ++++++|+++|+....|++.. ++++++++.+. ++++++++++.+ .+.+++.+
T Consensus 170 ------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~-----------~~~l~~~~ 228 (348)
T TIGR01133 170 ------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND-----------LEKVKNVY 228 (348)
T ss_pred ------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch-----------HHHHHHHH
Confidence 012444 567788999998877888654 55888887653 456655444321 24567777
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccC
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG-------PAEIIVHG 682 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG-------~~EiI~dg 682 (784)
+++++.+.+.|.. .++..+|+. +|++|.++ + |++++|||+||+|+|+++.+| ..+++.++
T Consensus 229 ~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 229 QELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred hhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 7787765555542 157788884 99999875 2 789999999999999997754 23578888
Q ss_pred ceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 683 KSGFHIDPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 683 ~~G~li~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
.+|++++++| +++++++|. ++++||+.+++|++++++++ +...-+++++
T Consensus 296 ~~G~~~~~~~~~~~~l~~~i~----~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 296 GAGLVIRQKELLPEKLLEALL----KLLLDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCEEEEecccCCHHHHHHHHH----HHHcCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 9999999886 999999997 45589999999999998877 5555555443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-24 Score=242.92 Aligned_cols=321 Identities=16% Similarity=0.154 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
.....+..+.+.. ..-|+|..|+....+++.++.++. ..++.+..|..+ +.+++. +.......-+.
T Consensus 113 vN~~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipf----P~~e~f--------~~lp~r~~il~ 179 (456)
T TIGR02400 113 VNRLFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPF----PSSEIY--------RTLPWRRELLE 179 (456)
T ss_pred HHHHHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCC----CChHHH--------hhCCcHHHHHH
Confidence 3334444455443 345899999999888888887764 457778888543 223221 11111122334
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC--CCCceEEecCCCCCCCCCCCcHHH---Hhhhc
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA--FDPKFNIVSPGADMTIYFPYMEEK---RRLKH 521 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~--f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~ 521 (784)
.|-.||.|...|+..+....+.....-. +-....++.. ...++.++|||+|++.|.+..... ++..
T Consensus 180 gll~~dligF~t~~~~~~Fl~~~~~~l~--------~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~- 250 (456)
T TIGR02400 180 GLLAYDLVGFQTYDDARNFLSAVSRELG--------LETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIA- 250 (456)
T ss_pred HHhcCCEEEECCHHHHHHHHHHHHHHhC--------CcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHH-
Confidence 7899999999998887644332211000 0000011111 134788999999999987643211 1110
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHH
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLE 597 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~e 597 (784)
..++++ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... +...+
T Consensus 251 -------------~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r--g~~~~ 310 (456)
T TIGR02400 251 -------------ELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR--GDVPE 310 (456)
T ss_pred -------------HHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc--cCchH
Confidence 111222 3678999999999999999999999998776665 56888874321 11122
Q ss_pred HHHHHHHHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----E
Q 003947 598 EQAEMKKMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----T 667 (784)
Q Consensus 598 e~~~~~~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----V 667 (784)
+....+.+++++.+.+. .+. +.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +
T Consensus 311 ~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~v 386 (456)
T TIGR02400 311 YQQLRRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVL 386 (456)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceE
Confidence 33333444444433221 111 44544 2677899999999 499999999999999999999999999 9
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
|+|+.+|..+.+. +|++++|.|++++|++|.+++ ..+++.++++.+++++++ .+||+...++++++-
T Consensus 387 VlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL---~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 387 ILSEFAGAAQELN---GALLVNPYDIDGMADAIARAL---TMPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred EEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 9999999888873 799999999999999998655 357888999999999998 679999999998763
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-23 Score=233.51 Aligned_cols=285 Identities=13% Similarity=0.085 Sum_probs=191.6
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
.+||+||++..+........+++.++|++.+-|.+... +...|+. .. ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~-------~~--~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQK-------FK--RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHH-------HH--HHHHHHHHhCCEEEECCHHH
Confidence 48999998755532223345677899998776644211 1111111 11 12335688899999999887
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC 541 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 541 (784)
++...+ .|++ .. +.+++|+ +.+.+.+....... ...++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~---------------~~~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA---------------ATLRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH---------------HHHHHHhc
Confidence 762211 2433 44 7788884 33333222111110 01122333
Q ss_pred cccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEc
Q 003947 542 VLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621 (784)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~fl 621 (784)
+++++++++|+. .|+.+.+++|+.++.+..++++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888864 6889999999999887789999999999853 125678888888885 35555
Q ss_pred cCcCCc--------CChhHHHHHHHccccEEEe-CCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 003947 622 SSQMNR--------VRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHG-KSGFHIDP 690 (784)
Q Consensus 622 G~~~~~--------v~~~el~~~la~aadvfV~-PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg-~~G~li~p 690 (784)
|..... -..+++..+|+. +|++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 999554 78889999999999999999999854 6667766553 46888889
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|+++++++|. .+++||+.+++|+++|++++.++ ...++++++++.
T Consensus 373 ~d~~~La~~l~----~ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVT----YLLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 99999999997 45589999999999999999665 355566666654
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-23 Score=227.95 Aligned_cols=264 Identities=12% Similarity=0.058 Sum_probs=180.6
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+||+||++++..++.....++..++|++++.++..... .+..+.+|.+++.|+.
T Consensus 102 ~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~ 157 (380)
T PRK13609 102 AEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDH 157 (380)
T ss_pred HhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHH
Confidence 3589999998776655444444556799886665432110 1246789999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+... ..|++ ..|+.++++.++.....+.... ..++++
T Consensus 158 ~~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~-------------------~~~~~~ 196 (380)
T PRK13609 158 VKKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPD-------------------IIYNKY 196 (380)
T ss_pred HHHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHH-------------------HHHHHc
Confidence 765211 12444 6688887666543221111111 123456
Q ss_pred ccccCCCCC-EEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 541 CVLKDSSKP-ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 541 gll~~~~k~-iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
|+ +++++ ++++.|++...||+..+++++.+. ++++++++||+.. ...+++++++++++ ++|+
T Consensus 197 ~l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~---------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 197 QL--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE---------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred CC--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH---------HHHHHHHHHHhcCC--CcEE
Confidence 66 45555 455668888889999999987542 6789998876421 22355666666655 6899
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----cccccCceEEEECCCCHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGPA----EIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~~----EiI~dg~~G~li~p~d~e 694 (784)
|+|+.. ++..+++. +|++|. ++.|++++|||+||+|+|+++ .+|.. +++.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999543 47788884 999885 566999999999999999985 55531 23332 34445567999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++|. ++++||+.+++|++++++.. +.++++.+++.+++++..
T Consensus 327 ~l~~~i~----~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 327 EVFAKTE----ALLQDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHH----HHHCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 9999887 45589999999999998865 778999999999988653
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=238.86 Aligned_cols=327 Identities=12% Similarity=0.110 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
...+..+..+.+... .-|+|..|.....+++..+.++ .+.++.+..|..++ .+++. +.+.+...-+
T Consensus 132 ~vN~~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFP----s~e~f--------r~lp~r~~il 198 (797)
T PLN03063 132 KANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFP----SSEIY--------KTLPSRSELL 198 (797)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCC----CHHHH--------hhCCCHHHHH
Confidence 334444445555432 3489999999988888888765 45788888887543 23221 1111112234
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH---HHhhhcc
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE---KRRLKHF 522 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~rl~~~ 522 (784)
..|-.||.|-+.|+..+....+.....-.. ..+..++ ...| ...++.++|||||.+.|.+.... ..+...
T Consensus 199 ~gll~aDligF~t~~y~r~Fl~~~~r~l~~-~~~~~~i--~~~g---r~~~I~viP~GID~~~f~~~~~~~~~~~~~~~- 271 (797)
T PLN03063 199 RAVLTADLIGFHTYDFARHFLSACTRILGV-EGTHEGV--VDQG---KVTRVAVFPIGIDPERFINTCELPEVKQHMKE- 271 (797)
T ss_pred HHHhcCCEEEeCCHHHHHHHHHHHHHHhCc-cccCCce--EECC---eEEEEEEEecccCHHHHHHHhcChhHHHHHHH-
Confidence 578899999999987765333211100000 0000000 0111 13478899999999887653211 111100
Q ss_pred hhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCcccHHH
Q 003947 523 HSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDLEE 598 (784)
Q Consensus 523 ~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v----~LvIVG~g~~~~s~d~ee 598 (784)
.++. ..++++|+++||+++.||++.+++|++++.+.+|++ .|+.+++... +..+++
T Consensus 272 -------------lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr--~~~~~y 331 (797)
T PLN03063 272 -------------LKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR--NDVPEY 331 (797)
T ss_pred -------------HHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC--CchHHH
Confidence 0111 236789999999999999999999999988777765 3554443211 111222
Q ss_pred HHHHHHHHHHHHhcC--CC---CcEEEccC--cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----E
Q 003947 599 QAEMKKMYGLIDTYK--LN---GQFRWISS--QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----T 667 (784)
Q Consensus 599 ~~~~~~l~~li~~l~--L~---~~V~flG~--~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----V 667 (784)
+++++.++++. +. +.+.|.|. ....++.+++..+|+ ++|+||+||..||||++++||||||+| +
T Consensus 332 ----~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvl 406 (797)
T PLN03063 332 ----QKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVL 406 (797)
T ss_pred ----HHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCE
Confidence 33444444432 22 22333331 113678899999999 499999999999999999999999999 9
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|+|.++|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..++.++++ .++||...++.+++-+..
T Consensus 407 VlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 407 VLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred EeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 999999999986 557999999999999999986652 48888999899999998 999999999999887754
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-23 Score=202.91 Aligned_cols=160 Identities=29% Similarity=0.470 Sum_probs=142.5
Q ss_pred CCCCCEEEEEecccCCCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~-~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+. ....+...++.+++.++|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~~- 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFLG- 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEEE-
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----------cccccccccccccccccccccc-
Confidence 57889999999999999999999999999764 7899999999653 2466888899999999999999
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~ 703 (784)
.++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.++
T Consensus 80 ---~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~ 155 (172)
T PF00534_consen 80 ---YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKL 155 (172)
T ss_dssp ---SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHH
T ss_pred ---ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHH
Confidence 6667899999996 999999999999999999999999999999999999999999999999999999999999855
Q ss_pred HHHhcCCHHHHHHHHHHHHHH
Q 003947 704 FEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 704 l~~ll~dp~~~~~m~~~a~~~ 724 (784)
+.+++.++.|+++|++|
T Consensus 156 ----l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 156 ----LNDPELRQKLGKNARER 172 (172)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HCCHHHHHHHHHHhcCC
Confidence 46899999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-21 Score=212.44 Aligned_cols=266 Identities=12% Similarity=0.067 Sum_probs=176.9
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+.+|++.+.+....+ ++...+.++|+.+++..... .... .. . ...|...++.||.|+|+|+.
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~-~~~~---~~----~-----~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAF-PGGP---PE----L-----LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhcc-CCCC---HH----H-----HHHHHHHHHhCCEEEECCHH
Confidence 55666666665544332 33356788999988854321 1110 00 0 13467789999999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+..++ ...++.+||||+|.+.|.+........ +.
T Consensus 164 l~~~~~~-------------------------~~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~-- 199 (373)
T cd04950 164 LYEAKRR-------------------------LNPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD-- 199 (373)
T ss_pred HHHHHhh-------------------------CCCCEEEcccccCHHHhhcccccCCCh-----------------hH--
Confidence 7652111 136899999999998887643211000 00
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
....++++|+|+|++++.++++.+.+++. ..++++|+++|++... . ... .+...++|.|
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~-----~------~~~----~~~~~~nV~~ 258 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS-----I------DPS----ALLRLPNVHY 258 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc-----c------Chh----HhccCCCEEE
Confidence 01346789999999999888766555443 3578999999998321 0 001 1112478999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCC-----CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPAL-----YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQ 695 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~-----~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~ 695 (784)
+| .++.+++..+++. +|++++|+. .+++|++++||||||+|||+|+.++.. ..+..+++ .++|+++
T Consensus 259 ~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-~~~d~~~ 329 (373)
T cd04950 259 LG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-IADDPEE 329 (373)
T ss_pred eC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-eCCCHHH
Confidence 99 7778999999995 999999986 346899999999999999999866544 34433444 4569999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
++++|.+++. .+.....+ ++.+ +.+.|||+..++++++...
T Consensus 330 ~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 330 FVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 9999987542 23222211 2222 5689999999999996543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=211.75 Aligned_cols=265 Identities=13% Similarity=0.135 Sum_probs=183.5
Q ss_pred CCCceEEEEcCCChh-HHHHHHHH-----hCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGN-IVASLLAH-----KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~-lva~llar-----~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 454 (784)
+.+||+||++.+..+ ..+..+++ ..++|++++++++.... ..+..+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 458999999765532 12223332 24789888877652100 01246789999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
++.|+...+.. ...|++ .+|+.++++++|.+.+.+.....
T Consensus 155 ~~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~------------------ 194 (382)
T PLN02605 155 FCPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPKD------------------ 194 (382)
T ss_pred EECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCHH------------------
Confidence 99998776521 123554 77999999999876544322111
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH----ccCCCeE-EEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA----KLRELVN-LVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~----~~~~~v~-LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
..++++|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+. ...+.+.+.
T Consensus 195 ~~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~----------~~~~~L~~~- 261 (382)
T PLN02605 195 ELRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK----------KLQSKLESR- 261 (382)
T ss_pred HHHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH----------HHHHHHHhh-
Confidence 22456787 678899999999999999999999987643 1135565 55666551 112223222
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCc
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN------GGPAEIIVHGK 683 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~------GG~~EiI~dg~ 683 (784)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+...++ ++.
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHHH-hCC
Confidence 2245799999543 6888888 599999865 48899999999999999983 4454444 444
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 684 SGFHIDPYKGDQATGILVDFFEKCKVD-PGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 684 ~G~li~p~d~e~lAe~I~~~l~~ll~d-p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++..
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELVR 380 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHhh
Confidence 67654 79999999998544 56 999999999999987 78889999988877643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=230.06 Aligned_cols=324 Identities=13% Similarity=0.104 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
..+..+..+.+..+ .-|+|..|+....+++..+.++. ..++.+..|..++ .+++... ......-..
T Consensus 119 vN~~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~--------lp~~~~ll~ 185 (726)
T PRK14501 119 VNQRFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL--------LPWREEILE 185 (726)
T ss_pred HHHHHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh--------CCChHHHHH
Confidence 33344445554433 34999999999988888887653 4678888887543 2222211 111122234
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHH---Hhhhcch
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEK---RRLKHFH 523 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~ 523 (784)
.|-.+|.|-..|........+.....-.. -+..+ .....|- ..++.++|||||.+.|.+..... .+...
T Consensus 186 ~ll~~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~-- 257 (726)
T PRK14501 186 GLLGADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRR-- 257 (726)
T ss_pred HHhcCCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHH--
Confidence 78899999998877655332221110000 00000 0111111 23688999999999887643211 11000
Q ss_pred hhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHH
Q 003947 524 SEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQ 599 (784)
Q Consensus 524 ~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~ 599 (784)
.++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.... ..++.
T Consensus 258 ------------lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~--~~~~~ 318 (726)
T PRK14501 258 ------------LRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTG--VPQYQ 318 (726)
T ss_pred ------------HHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc--hHHHH
Confidence 0111 24678999999999999999999999998776675 7899998542210 12333
Q ss_pred HHHHHHHHHHHhcCC-------CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC-----CcE
Q 003947 600 AEMKKMYGLIDTYKL-------NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG-----LPT 667 (784)
Q Consensus 600 ~~~~~l~~li~~l~L-------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~G-----lPV 667 (784)
+..+.+.+++.+.+- .+.+.+.| .++.+++..+|+. +|+||+||..||||++++|||||| .||
T Consensus 319 ~l~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~v 393 (726)
T PRK14501 319 EMKREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLI 393 (726)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEE
Confidence 444555555554331 12334555 6788999999995 999999999999999999999994 566
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++...|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||..+++++++.|+.
T Consensus 394 ls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 394 LSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred EecccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 667778888875 4899999999999999986552 33445555567889988 799999999999998875
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-20 Score=185.07 Aligned_cols=121 Identities=31% Similarity=0.518 Sum_probs=102.7
Q ss_pred EEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhH
Q 003947 553 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE 632 (784)
Q Consensus 553 ~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~e 632 (784)
++|++.+.||++.+++++..+.+..++++++++|++.+. ......+..++..++|.++| .++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~----~~~~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLG----GLDPEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeC----CCCcHH
Confidence 999999999999999999999888889999999998651 22333366778889999999 443344
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003947 633 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688 (784)
Q Consensus 633 l~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li 688 (784)
....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 45555435999999999999999999999999999999999999999999999874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-19 Score=207.96 Aligned_cols=342 Identities=14% Similarity=0.151 Sum_probs=233.2
Q ss_pred HHcCCCceEEEEcCCChhHHHHHHHHh--------------CCCcEEEEecCCcccC---CCCCc-------------ch
Q 003947 378 QELQCKPDLIIGNYSDGNIVASLLAHK--------------LDVTQCTIAHALELTK---YPDSD-------------IN 427 (784)
Q Consensus 378 ~~~~~~pDIIh~~~~~~~lva~llar~--------------~gvp~V~t~H~l~~~k---~~~s~-------------~~ 427 (784)
+.+..+||+||+|.+.++++...+.+. .+.+.++|.|++...- ++... +.
T Consensus 156 ~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~ 235 (601)
T TIGR02094 156 RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLP 235 (601)
T ss_pred HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCC
Confidence 334679999999999998877665332 1366899999976543 22111 11
Q ss_pred hhhccc---ccc-ccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC
Q 003947 428 WKKLDD---KYH-FSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG 503 (784)
Q Consensus 428 ~~~~~~---~y~-~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG 503 (784)
+..+.. .+. ...++..-+.++..||.|.+||+...+-.++..+. ++ .+.+....++.-|.||
T Consensus 236 ~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~-----------l~---~~~~~~~~~i~gItNG 301 (601)
T TIGR02094 236 REQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQF-----------LY---PGYEEEEVPIGYVTNG 301 (601)
T ss_pred HHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHh-----------hh---hhcccccCCccceeCC
Confidence 110000 000 00123344578999999999998766522211111 00 0111113358889999
Q ss_pred CCCCCCCCCcHHHHhhhcchhh---------------------h-HHhhcCchhhhh---------------------hh
Q 003947 504 ADMTIYFPYMEEKRRLKHFHSE---------------------I-EELLYSPVENKE---------------------HL 540 (784)
Q Consensus 504 vD~~~f~p~~~~~~rl~~~~~~---------------------~-~~~l~~~~~~~~---------------------~~ 540 (784)
||...|.|.+...-.-+-.... + +...-++....+ .+
T Consensus 302 Id~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 302 VHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 9999998754332100000000 0 011111111111 35
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc--C--CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL--R--ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
|+..+++.+++++++|+..+||.+.+++++.++.+. . ..+++|+.|.+.+ .|...++.++.+.+++++...++
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p---~d~~gk~~i~~i~~la~~~~~~~ 458 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP---ADGEGKEIIQRIVEFSKRPEFRG 458 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc---ccchHHHHHHHHHHHHhcccCCC
Confidence 555678999999999999999999999998888642 1 4699999999965 24455667788888888766788
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC----
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP---- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p---- 690 (784)
+|.|+- .. +..+.+.+-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.|.+
T Consensus 459 kv~f~~----~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE----NY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc----CC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 999985 23 33555555557999999 999 999999999999999999999999988887 6679999984
Q ss_pred --------CCHHHHHHHHHHHH-HHhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 691 --------YKGDQATGILVDFF-EKCKVD-----PGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 691 --------~d~e~lAe~I~~~l-~~ll~d-----p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
.|++++-++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 223343 66799999999988777899999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-18 Score=184.44 Aligned_cols=291 Identities=23% Similarity=0.296 Sum_probs=208.9
Q ss_pred ceEEEEcCCChhH---HHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 384 PDLIIGNYSDGNI---VASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 384 pDIIh~~~~~~~l---va~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+|++|.+...... .........+.+.+...|....................+. ...........++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987765533 3555666677888888887654221111111000000000 000011112247778888765
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
...-.+. ... ..++.++||+++...+.+.. .
T Consensus 161 ~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA--------------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH--------------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 011 33788999999988776530 1
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
++.....+.+++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+...+.+++..+++.|
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~v~~ 261 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----------REELEKLAKKLGLEDNVKF 261 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----------HHHHHHHHHHhCCCCcEEE
Confidence 111011147899999999999999999999999887677999999999641 2445568888888889999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+++.+|..+++.++.+|+++++.|.+++++++
T Consensus 262 ~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i 336 (381)
T COG0438 262 LG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336 (381)
T ss_pred ec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHH
Confidence 98 5556788888875 899999999999999999999999999999999999999998778887777899999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 701 ~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
..++ ++++.++.+++.+++.+.+.|+|+.+++++.+++...
T Consensus 337 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 337 EQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 8554 6778889999878888878999999999999988753
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-19 Score=198.13 Aligned_cols=263 Identities=15% Similarity=0.159 Sum_probs=177.4
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+||+||++.+.+++.....++..++|+++..++..... . +..+.+|.+++.|+.
T Consensus 102 ~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~------------------w~~~~~d~~~v~s~~ 157 (391)
T PRK13608 102 KEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------N------------------WITPYSTRYYVATKE 157 (391)
T ss_pred HhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------c------------------cccCCCCEEEECCHH
Confidence 3599999997665543333333456899865544321000 0 235679999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+.. ...|++ ..|+.+++++++.....+.... +.++++
T Consensus 158 ~~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~-------------------~~~~~~ 196 (391)
T PRK13608 158 TKQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQK-------------------QWLIDN 196 (391)
T ss_pred HHHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHH-------------------HHHHHc
Confidence 76521 123554 6788898888775432222111 112346
Q ss_pred ccccCCCCCE-EEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 541 CVLKDSSKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 541 gll~~~~k~i-Il~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
|+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. ... .++.+.++..++|.
T Consensus 197 ~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~---------~l~---~~l~~~~~~~~~v~ 259 (391)
T PRK13608 197 NL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK---------ELK---RSLTAKFKSNENVL 259 (391)
T ss_pred CC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH---------HHH---HHHHHHhccCCCeE
Confidence 65 455555 5678999989999999998632 336789887765421 111 22333345556899
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGP----AEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~----~EiI~dg~~G~li~p~d~e 694 (784)
++|++. ++..+|+. +|++|. ++.|+|+.|||+||+|+|+++ .+|- ..++.+...|+. +.|.+
T Consensus 260 ~~G~~~------~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~ 326 (391)
T PRK13608 260 ILGYTK------HMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPE 326 (391)
T ss_pred EEeccc------hHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHH
Confidence 999543 68888884 999997 357999999999999999995 3331 223334445655 45899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++++|. .+++|++.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~----~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVA----SLTNGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHH----HHhcCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 9998887 45589999999999999986 77999999999998765
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.6e-18 Score=191.02 Aligned_cols=325 Identities=11% Similarity=0.069 Sum_probs=219.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..+..+.+.. ..-|+|-.|+....+++..+.++. ..++-+-.|..++ .+++. +.+.....-+..|-
T Consensus 121 ~FA~~i~~~~-~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFP----s~eif--------r~LP~r~~ll~glL 187 (487)
T TIGR02398 121 AFAEAACLEA-AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFP----SADVF--------NILPWREQIIGSLL 187 (487)
T ss_pred HHHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCC----ChHHH--------hhCCchHHHHHHHh
Confidence 3344444432 244899999999888888887653 4567777776533 22221 11111122334788
Q ss_pred ccCEEEecChHhHhhcccccccccccccccc----ccc---------eeeecCCCCCC--CceEEecCCCCCCCCCCCcH
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSL----PGL---------YRVVNGIDAFD--PKFNIVSPGADMTIYFPYME 514 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~----p~l---------~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~~~ 514 (784)
.||.|=+.|+..+....+..........-.- +.. .....++.+.. -++.++|.|||.+.|.+...
T Consensus 188 ~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~ 267 (487)
T TIGR02398 188 CCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALA 267 (487)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhc
Confidence 9999999988776543332221100000000 000 00000111112 25788999999998855321
Q ss_pred ---HHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeC
Q 003947 515 ---EKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGG 587 (784)
Q Consensus 515 ---~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~ 587 (784)
...+.. ..++++| ++++|++++|++..||+...++|+.++.+.+|+ +.|+++|.
T Consensus 268 ~~~~~~~~~--------------~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~ 328 (487)
T TIGR02398 268 AASIREMME--------------RIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACV 328 (487)
T ss_pred CchHHHHHH--------------HHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeC
Confidence 111111 1223333 678999999999999999999999999877775 79999987
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhc-------CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHH
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTY-------KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 660 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l-------~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEA 660 (784)
... +..+++.+..+++++++.+. +..+-+.+.+ .++.+++..+|+ .||+++.+|..||++++..|+
T Consensus 329 psr--~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 329 PAA--SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred CCc--ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhH
Confidence 754 22344555666777777765 4445566666 788999999999 499999999999999999999
Q ss_pred HHcCC----cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 661 MTCGL----PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 661 MA~Gl----PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
|||+. |+|.|..+|.++.+ ..+++++|.|++++|++|.++++ ..++.+++--+..++++ .++|....++
T Consensus 402 va~~~~~~GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~ 474 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWAD 474 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHH
Confidence 99999 99999999998776 24899999999999999997663 56666666666677776 8889888888
Q ss_pred HHHHH
Q 003947 737 RLLNL 741 (784)
Q Consensus 737 ~ll~l 741 (784)
.++.-
T Consensus 475 ~fl~~ 479 (487)
T TIGR02398 475 EFLAA 479 (487)
T ss_pred HHHHH
Confidence 87754
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-18 Score=188.73 Aligned_cols=276 Identities=12% Similarity=0.060 Sum_probs=178.5
Q ss_pred CCCceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|... ..+.+.++++.+|+|++.+-+++.... .. ..+.... . .....+.||.++++|+
T Consensus 84 ~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-----~~-~~~~~~~---~----r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 84 EEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-----RY-SPMPEEI---N----RQLTGHIADLHFAPTE 150 (365)
T ss_pred HcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-----CC-CCCccHH---H----HHHHHHHHHhccCCCH
Confidence 3489999999643 467788999999999886655431110 00 0000000 0 0112335899999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..++.+. ..|++ +.++.+++||+....+.+..... ....++.
T Consensus 151 ~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~----------------~~~~~~~ 192 (365)
T TIGR00236 151 QAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAY----------------SSPVLSE 192 (365)
T ss_pred HHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhcc----------------chhHHHh
Confidence 8776321 12555 77999999996322211110000 0011122
Q ss_pred hccccCCCCCEEEEEe-ccc-CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 540 LCVLKDSSKPILFTMA-RLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 540 ~gll~~~~k~iIl~vG-RL~-~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
++ .+++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. . ..+ .+.+.++..++
T Consensus 193 ~~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~---~~~---~~~~~~~~~~~ 256 (365)
T TIGR00236 193 FG----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP------V---VRE---PLHKHLGDSKR 256 (365)
T ss_pred cC----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------H---HHH---HHHHHhCCCCC
Confidence 33 1334555544 542 45899999999999877678899999865422 1 111 13344456678
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQA 696 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~l 696 (784)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+| +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99998 5667788888886 99999887 66789999999999996 778888998877 55666 4789999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
+++|.+ +++||+.+++|++++..+- +..+++++++.+.+
T Consensus 325 ~~ai~~----ll~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKR----LLTDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHH----HHhChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999974 4579999998887663322 34556666655544
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=182.00 Aligned_cols=246 Identities=15% Similarity=0.152 Sum_probs=166.4
Q ss_pred CCc-eEEEEcCCChh---HHHHH--HHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEE
Q 003947 382 CKP-DLIIGNYSDGN---IVASL--LAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFII 455 (784)
Q Consensus 382 ~~p-DIIh~~~~~~~---lva~l--lar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 455 (784)
-++ |+||.+++... +...+ ..++.++|+|.++|++++...... .+ . ...+...++.||.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~---------~~--~--~~~~~~~~~~aD~iI 128 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN---------YY--L--MKEEIDMLNLADVLI 128 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc---------ch--h--hHHHHHHHHhCCEEE
Confidence 356 99999887542 11222 223447999999999865321100 00 0 123567899999999
Q ss_pred ecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 456 TSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 456 t~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
+.|+..++.+++ .|+. ..++.+++++.+.....+.
T Consensus 129 ~~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----------------------- 163 (333)
T PRK09814 129 VHSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----------------------- 163 (333)
T ss_pred ECCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc-----------------------
Confidence 999988763221 2443 4577777665543211000
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
.....++.|+|+|++.+.+++. +..++++|+|+|+|+.. + ...
T Consensus 164 -------~~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~~-----------~---------~~~ 206 (333)
T PRK09814 164 -------KTPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPED-----------L---------ENS 206 (333)
T ss_pred -------ccccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCccc-----------c---------ccC
Confidence 0023456899999999543211 12367999999999651 0 345
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-L----------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKS 684 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~----------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~ 684 (784)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..++|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 7888999999985 4333322 1 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003947 685 GFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 685 G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ 737 (784)
|++++ +.++++++|.. .+++.+++|++++++.. +++.-..++++
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 99997 67888888863 24677899999999877 55554444433
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.6e-17 Score=181.38 Aligned_cols=250 Identities=12% Similarity=0.096 Sum_probs=160.1
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||++.+.+ .......+++.++|++...+.. .|...... . ....+.+|.++++++
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCc
Confidence 45899999876532 2222344566799988654431 11100000 0 113567899999997
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+... ..|+ ++.++.|.+......+.... +.+++
T Consensus 144 ~~~~~~~--------------------~~g~-----~~~~~G~p~~~~~~~~~~~~-------------------~~~~~ 179 (380)
T PRK00025 144 FEAAFYD--------------------KLGV-----PVTFVGHPLADAIPLLPDRA-------------------AARAR 179 (380)
T ss_pred cCHHHHH--------------------hcCC-----CeEEECcCHHHhcccccChH-------------------HHHHH
Confidence 6554110 0121 35556655433211111111 12345
Q ss_pred hccccCCCCCEEE-EEe-cccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-CCC
Q 003947 540 LCVLKDSSKPILF-TMA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-KLN 615 (784)
Q Consensus 540 ~gll~~~~k~iIl-~vG-RL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~L~ 615 (784)
+|+ ++++++|+ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+.+++.++++ ++.
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK----------RREQIEEALAEYAGLE 247 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh----------hHHHHHHHHhhcCCCC
Confidence 665 45666654 444 44443 457899999999887778899999987422 124455666666 553
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----------------CNGGPAEI 678 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-----------------~~GG~~Ei 678 (784)
+.+.. +++..+|+. +|++|.+| |.+.+|||+||+|+|++ +.++++++
T Consensus 248 --v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 54442 368888884 99999997 88889999999999987 56777888
Q ss_pred cccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003947 679 IVHGK--SGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRI 725 (784)
Q Consensus 679 I~dg~--~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v 725 (784)
+.++. .+++.+..|++++++++.+ +++|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLP----LLADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 87753 5577778899999999974 5589999999999875554
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-16 Score=162.44 Aligned_cols=389 Identities=16% Similarity=0.234 Sum_probs=247.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCC---CcCcceee
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGT---TCGQRVEK 331 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~---~~~~~~e~ 331 (784)
..++++.|+..- .||-+.+..-.+|++.+. -..+ +++|+|..++..... ...+..+-
T Consensus 44 ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~----~~viYsGD~n~t~~~IL~k~k~~F~i 103 (465)
T KOG1387|consen 44 KTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNN----VIVIYSGDFNVTPENILNKVKNKFDI 103 (465)
T ss_pred eEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCc----eEEEEeCCCCCCHHHHHHHHHHhcCc
Confidence 568888777763 377888888888876221 1111 244666554221100 00011122
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHH---HcCCCceEEEEcCCChhHHHHHHHHhCCCc
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQ---ELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~---~~~~~pDIIh~~~~~~~lva~llar~~gvp 408 (784)
..+.+++..+.+..+. |++ ..-|++..-..+.+..-++. ..+..|||.+-...-+ +.-...++..++|
T Consensus 104 dlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~ 174 (465)
T KOG1387|consen 104 DLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRIP 174 (465)
T ss_pred eecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccCc
Confidence 2233455555544332 333 33455544444444443332 3367899988533222 2223345567899
Q ss_pred EEEEecCCccc-CC-------CCC-cchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccc
Q 003947 409 QCTIAHALELT-KY-------PDS-DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFS 479 (784)
Q Consensus 409 ~V~t~H~l~~~-k~-------~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~ 479 (784)
++..+|-.--. +. +.+ -+.|.++. .|+...+. -..+=..||.++++|......++..|+
T Consensus 175 V~aYvHYP~iS~DML~~l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~--------- 242 (465)
T KOG1387|consen 175 VVAYVHYPTISTDMLKKLFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQ--------- 242 (465)
T ss_pred eEEEEecccccHHHHHHHHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhh---------
Confidence 99999942211 10 111 12222211 12111111 123456799999999776554444432
Q ss_pred cccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccC
Q 003947 480 LPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDR 559 (784)
Q Consensus 480 ~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~ 559 (784)
..+..+|+|..+++.... ..+- ...+.+.++++|.+.|
T Consensus 243 --------------~~~~~iVyPPC~~e~lks---------------------------~~~t-e~~r~~~ll~l~Q~RP 280 (465)
T KOG1387|consen 243 --------------SNTCSIVYPPCSTEDLKS---------------------------KFGT-EGERENQLLSLAQFRP 280 (465)
T ss_pred --------------ccceeEEcCCCCHHHHHH---------------------------Hhcc-cCCcceEEEEEeecCc
Confidence 346778888766541110 1111 2456788999999999
Q ss_pred CCChHHHHHHHHHhHc------cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHH
Q 003947 560 VKNLTGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGEL 633 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~------~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el 633 (784)
.||.. +++.++-... ..+.++|++||+... .+..+..+.|+++++++.++++|.|-- .+|.+++
T Consensus 281 EKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~l 350 (465)
T KOG1387|consen 281 EKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYEKL 350 (465)
T ss_pred ccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHHHH
Confidence 99999 5555443322 235689999999854 244566788999999999999999987 7899999
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc--C-ceEEEECCCCHHHHHHHHHHHHHHhcC
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP-AEIIVH--G-KSGFHIDPYKGDQATGILVDFFEKCKV 709 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~d--g-~~G~li~p~d~e~lAe~I~~~l~~ll~ 709 (784)
..++.. |.+.|..-..|-||+.++|+||+|+-.|+.+.||+ -+|+.+ | .+||+. .+.++.|+++.++.. .
T Consensus 351 v~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla--~t~~EYaE~iLkIv~---~ 424 (465)
T KOG1387|consen 351 VELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA--PTDEEYAEAILKIVK---L 424 (465)
T ss_pred HHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec--CChHHHHHHHHHHHH---c
Confidence 999996 88999999999999999999999999999999998 466653 3 579987 366889999997764 7
Q ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 710 DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 710 dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|++.+..|+++||..+ .+|+=....+.+.+.+.
T Consensus 425 ~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i~ 457 (465)
T KOG1387|consen 425 NYDERNMMRRNARKSL-ARFGELKFDKDWENPIC 457 (465)
T ss_pred CHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHHH
Confidence 8888999999999987 88887777777665543
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.9e-16 Score=188.18 Aligned_cols=325 Identities=12% Similarity=0.128 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHH
Q 003947 369 TEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFA 447 (784)
Q Consensus 369 ~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a 447 (784)
.+..+..+.+..+ .=|+|.+|.....+++.++.++. ..++.+..|..++ .+++ ++.+.+...-+..
T Consensus 218 N~~FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP----s~Ei--------fr~LP~r~elL~g 284 (934)
T PLN03064 218 NQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP----SSEI--------HRTLPSRSELLRS 284 (934)
T ss_pred HHHHHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC----ChHH--------HhhCCcHHHHHHH
Confidence 3344445554432 34899999999888888887764 5678888887543 2221 2222222233457
Q ss_pred hcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC--CceEEecCCCCCCCCCCCcH---HHHhhhcc
Q 003947 448 MNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD--PKFNIVSPGADMTIYFPYME---EKRRLKHF 522 (784)
Q Consensus 448 ~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl~~~ 522 (784)
|-.||.|=+.|+..+....+.....- ++-....++.... .++.+.|-|||.+.|..... ...+..
T Consensus 285 lL~aDlIGFqT~~y~rhFl~~c~rlL--------g~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~-- 354 (934)
T PLN03064 285 VLAADLVGFHTYDYARHFVSACTRIL--------GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIK-- 354 (934)
T ss_pred HhcCCeEEeCCHHHHHHHHHHHHHHh--------CccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHH--
Confidence 88999999999877653332211100 0000011222112 14667899999988764321 111111
Q ss_pred hhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeE--EEEEeCCCCCCcccHHHHH
Q 003947 523 HSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN--LVVVGGDRRKESKDLEEQA 600 (784)
Q Consensus 523 ~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~--LvIVG~g~~~~s~d~ee~~ 600 (784)
..++++ .++.+|++++|++..||+...+.||.++.+.+|+++ ++++--..++.+..+++.+
T Consensus 355 ------------~lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~ 417 (934)
T PLN03064 355 ------------ELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417 (934)
T ss_pred ------------HHHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHH
Confidence 112222 357799999999999999999999999877777653 4444211221122234444
Q ss_pred HHHHHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEc
Q 003947 601 EMKKMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFAT 670 (784)
Q Consensus 601 ~~~~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----PVIaT 670 (784)
...++.+++.+.+- .+. |.++. ..++.+++..+|+. +|+|++||..|||+++..|||+|+. ++|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 44555555554431 122 44443 24788999999994 9999999999999999999999954 44559
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 671 ~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.++|.++.+ +..+++|+|.|.+++|++|.++++ .+++.++++.+++++++ ..+||...++.+++-..
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSELN 560 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHHH
Confidence 999999888 446999999999999999997653 58999999999999998 88999999999766443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=176.84 Aligned_cols=251 Identities=16% Similarity=0.113 Sum_probs=165.2
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||+|.... .+.+.++++..++|++.+.|+... +..+. .|. .. .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~----~~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDE----EN--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-Cch----HH--------HHHHHHHhhhccCCCHH
Confidence 4899999996543 567788888899998877665422 10000 010 00 11235678999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCC-CCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGA-DMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+.+ ...|++ ..++.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 76521 123555 77899999985 4322211110000 01123
Q ss_pred hccccCCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC-C
Q 003947 540 LCVLKDSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL-N 615 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L-~ 615 (784)
+++ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+.+++.++++++ .
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~-----------~~~l~~~~~~~~~~~ 257 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT-----------RPRIREAGLEFLGHH 257 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh-----------HHHHHHHHHhhccCC
Confidence 454 345567778998875 79999999999988653 466666665532 3456677777776 6
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHH
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg~~G~li~p~d~e 694 (784)
++|+|+| .....++..+++. +|++|.||- | ++.|||+||+|+|+++. +...+.+.+| .++.+. .|++
T Consensus 258 ~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~~ 325 (363)
T cd03786 258 PNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDPE 325 (363)
T ss_pred CCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCHH
Confidence 7899998 4556788888885 999999984 4 47899999999999964 4466766554 233332 3688
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEI 717 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m 717 (784)
+++++|.+ +++++..+.+|
T Consensus 326 ~i~~~i~~----ll~~~~~~~~~ 344 (363)
T cd03786 326 AILAAIEK----LLSDEFAYSLM 344 (363)
T ss_pred HHHHHHHH----HhcCchhhhcC
Confidence 99988874 45788777665
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-15 Score=182.13 Aligned_cols=343 Identities=13% Similarity=0.129 Sum_probs=229.8
Q ss_pred HHcCCCceEEEEcCCChhHHHH-----HHHHh----------CCCcEEEEecCCcccC---CCCCc-------------c
Q 003947 378 QELQCKPDLIIGNYSDGNIVAS-----LLAHK----------LDVTQCTIAHALELTK---YPDSD-------------I 426 (784)
Q Consensus 378 ~~~~~~pDIIh~~~~~~~lva~-----llar~----------~gvp~V~t~H~l~~~k---~~~s~-------------~ 426 (784)
+.+..+||+||+|.+.++++.. ++... .+.+.|+|.|++.+.- ++... +
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3345689999999999988777 44321 1356899999975432 22111 1
Q ss_pred hhhhcccccc-c----cchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEec
Q 003947 427 NWKKLDDKYH-F----SCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVS 501 (784)
Q Consensus 427 ~~~~~~~~y~-~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIp 501 (784)
.+..+..... + ..++..-+.++..|+.|.+||+-.-+-+++.+.. ...|.+....++.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceecee
Confidence 1111100000 0 0123344578999999999998653222222111 1123332245789999
Q ss_pred CCCCCCCCC-CCcHHHH-h--------------------------hhcchhhhHHhhcCchhh---------------hh
Q 003947 502 PGADMTIYF-PYMEEKR-R--------------------------LKHFHSEIEELLYSPVEN---------------KE 538 (784)
Q Consensus 502 nGvD~~~f~-p~~~~~~-r--------------------------l~~~~~~~~~~l~~~~~~---------------~~ 538 (784)
|||+...|. |..+.-- + +-+.+....+.|...... -.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4322110 0 000111111111111000 00
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
..+..-+++.++|+++.|+..+|+.+.++..+.++.+. ...++||++|.+.+ .|...++.++.+.+++++...
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP---~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP---ADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc---cchHHHHHHHHHHHHHhCcCC
Confidence 12333467888999999999999999999988877542 13599999999876 345567788889999987778
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC--
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP-- 690 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p-- 690 (784)
.++|.|+- ..+ ..+.+.+-.++|++++||. +|++|++-+-||.-|.+.+++-.|...|.- +|.|||.|.+
T Consensus 546 ~~kVvfle----~Yd-~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~ 619 (778)
T cd04299 546 RGRIVFLE----DYD-MALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGD 619 (778)
T ss_pred CCcEEEEc----CCC-HHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCc
Confidence 88999985 333 3555555557999999999 999999999999999999999999999987 7899999988
Q ss_pred ----------CCHHHHHHHHHHHHH-HhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 ----------YKGDQATGILVDFFE-KCKV-----DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ----------~d~e~lAe~I~~~l~-~ll~-----dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|++++-+.|.+.+- ...+ .|..|.+|.+++.+.+...|||..|+++|.+-+-
T Consensus 620 ~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 620 EYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred cccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 566666677754332 2223 2888999999999998889999999999987654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-14 Score=167.19 Aligned_cols=169 Identities=12% Similarity=0.141 Sum_probs=144.9
Q ss_pred CCEEEEEe--cccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC----------
Q 003947 548 KPILFTMA--RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN---------- 615 (784)
Q Consensus 548 k~iIl~vG--RL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~---------- 615 (784)
+..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+. ...+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDN--------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCch--------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 34577777 99 999999999999999888999999999987431 1235566666777665
Q ss_pred -------------------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003947 616 -------------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA 676 (784)
Q Consensus 616 -------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~ 676 (784)
++|.|.|. .+..++.+.+.. +.++|.+|..|+|+ +.+||++.|+|+| .-|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy----~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTL----TNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEec----CCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 78999994 344578899986 88999999999999 9999999999999 56789
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 677 EIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
++|.||+||+++ +|..+++++|..+ +.+++.|++++..+.+.+ ++||-+.+++++.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~----L~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYY----LDNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 999999999999 7999999999854 589999999999999998 999999999888764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-14 Score=160.99 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=182.6
Q ss_pred CCceEEEEcCCChhHHHHHHHH-hCCCcEEEEecCCcccCCC---CCc-------chhhhccccccccchhhhhHHHhcc
Q 003947 382 CKPDLIIGNYSDGNIVASLLAH-KLDVTQCTIAHALELTKYP---DSD-------INWKKLDDKYHFSCQFTADLFAMNR 450 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar-~~gvp~V~t~H~l~~~k~~---~s~-------~~~~~~~~~y~~~~~~~~e~~a~~~ 450 (784)
.+.-|.|+|-|..+.-..++.+ ...|..|+|.|+.-...+. ..+ ..+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 3556778999987544333333 3457889999985432221 011 1122222334444556678889999
Q ss_pred cCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHH--
Q 003947 451 TDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE-- 528 (784)
Q Consensus 451 AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~-- 528 (784)
||+..|+|+-.+...+..++ ...=.|+|||.+.+.|....+........+.+|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999877765444322 22236789999998776654433211111222332
Q ss_pred --hhcCchhhhhhhccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCcccHHH
Q 003947 529 --LLYSPVENKEHLCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKESKDLEE 598 (784)
Q Consensus 529 --~l~~~~~~~~~~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~s~d~ee 598 (784)
.+++. +.+ ..++..+|++.||.+ +.||+|.++||++++... ..+ +-|+|+=.... +...|-
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~--~~~ve~ 349 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN--SFNVES 349 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE--EE-HHH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC--CcCHHH
Confidence 22222 122 123457789999998 689999999999987531 222 33444433221 111111
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003947 599 QA----------------------------------------------------------------------EMKKMYGL 608 (784)
Q Consensus 599 ~~----------------------------------------------------------------------~~~~l~~l 608 (784)
.. .-+.+...
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 00 11233444
Q ss_pred HHhcCCC----Cc--EEEcc---CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003947 609 IDTYKLN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII 679 (784)
Q Consensus 609 i~~l~L~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI 679 (784)
+++.++. ++ |.|++ ...+.+=+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|+...+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 4455542 22 45554 12233444567888885 999999999999999999999999999999999986555
Q ss_pred cc-----CceEEEE-C--CCCHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 680 VH-----GKSGFHI-D--PYKGDQATGILVDFFEKC-KVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 680 ~d-----g~~G~li-~--p~d~e~lAe~I~~~l~~l-l~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+ ...|+.| + -.+.++.++.|.+++... ..+...+..+..++.+. .+..+|+.....|.+.|..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH
Confidence 42 3346644 3 346777777777766554 34566666666666554 4999999999999998874
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=137.63 Aligned_cols=130 Identities=19% Similarity=0.272 Sum_probs=95.7
Q ss_pred CCEEEEEecccCCCChHHHHH-HHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------------~l~~~-----~~~~v~~~g---- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------------ELKRL-----RRPNVRFHG---- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------------HHCCH-----HHCTEEEE-----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------------HHHHh-----cCCCEEEcC----
Confidence 467999999999999999999 9999998889999999999753 12222 245899999
Q ss_pred cCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.+ +++.++++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 ~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 489999996 999999985 78999999999999999999998 677777656677777 789999999998654
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-12 Score=133.52 Aligned_cols=386 Identities=12% Similarity=0.107 Sum_probs=233.1
Q ss_pred HHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHH
Q 003947 297 LRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEI 376 (784)
Q Consensus 297 ~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i 376 (784)
..|++.|++|+ ++.-..+ .+.+++...++++|+.+|--+..+...+ . +.--+..|.+.+ .-+
T Consensus 34 ~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p~----~-~~l~lKvf~Qfl-~Ll 95 (444)
T KOG2941|consen 34 LSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGPR----V-LFLPLKVFWQFL-SLL 95 (444)
T ss_pred HHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCch----h-hhhHHHHHHHHH-HHH
Confidence 36799999999 7754321 2344555567899998876543221110 0 000111121111 111
Q ss_pred HHH-cCCCceEEEEcCCCh---hHHHHHHHHhCCCcEEEEecCCccc-CCCCCcchhhhccccccccchhhhhHHHhccc
Q 003947 377 IQE-LQCKPDLIIGNYSDG---NIVASLLAHKLDVTQCTIAHALELT-KYPDSDINWKKLDDKYHFSCQFTADLFAMNRT 451 (784)
Q Consensus 377 ~~~-~~~~pDIIh~~~~~~---~lva~llar~~gvp~V~t~H~l~~~-k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 451 (784)
.+. ....+|+|...++.+ -.++.+.+...|.+++.+.|++..+ ....+ ....... ..+....|+..-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~---~g~~h~l--V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLK---LGFQHPL--VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhh---cCCCCch--HHHHHHHHHHhhccc
Confidence 111 156899999988875 4577777788899999999997643 10000 0000111 122223467777889
Q ss_pred CEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceE--EecCCCCCCCCCCCcHHHHhhhcchhhhHHh
Q 003947 452 DFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFN--IVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529 (784)
Q Consensus 452 D~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~--VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 529 (784)
|.-.|+|..+++.+.+.+|--.....+..|.- ++.+ -...+ ..+-+-|...|.. | ..-...+++-
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps----~~~~--l~~~H~lf~~l~~d~~~f~a------r-~~q~~~~~~t 237 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGINRAKVLYDRPPS----KPTP--LDEQHELFMKLAGDHSPFRA------R-EPQDKALERT 237 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCceeEEEecCCCC----CCCc--hhHHHHHHhhhccccchhhh------c-ccccchhhhh
Confidence 99999999998877776652211111111110 0000 00000 0011111111110 0 0001112222
Q ss_pred hcCchhh-hhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH-----c--cCCCeEEEEEeCCCCCCcccHHHHHH
Q 003947 530 LYSPVEN-KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA-----K--LRELVNLVVVGGDRRKESKDLEEQAE 601 (784)
Q Consensus 530 l~~~~~~-~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~-----~--~~~~v~LvIVG~g~~~~s~d~ee~~~ 601 (784)
.|..-.. +...-. .....++++.....+..++..|++|+..-. + ..|..-++|.|.||.
T Consensus 238 af~~k~~s~~v~~~--~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl----------- 304 (444)
T KOG2941|consen 238 AFTKKDASGDVQLL--PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL----------- 304 (444)
T ss_pred hHhhhcccchhhhc--cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-----------
Confidence 2221111 001111 222345667778899999999999987331 1 246778888888876
Q ss_pred HHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEe--CCC-CCCCcHHHHHHHHcCCcEEEcCccccccc
Q 003947 602 MKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ--PAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEI 678 (784)
Q Consensus 602 ~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~--PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~Ei 678 (784)
.+++.+.|++++++ +|.+.- .+...++...+++ ++|+.|. .|. .=..|++|+....||+||+|-++.-+.|+
T Consensus 305 kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 305 KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 36777888988875 355443 3778888888888 4886554 443 33579999999999999999999999999
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 679 IVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 679 I~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
++||+||++++ |.+++|+++.-.+...-.+.+..+++.+++++. +.+.|+...++...
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 99999999995 899999999877766666899999999999987 67888877766544
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-12 Score=142.94 Aligned_cols=249 Identities=15% Similarity=0.089 Sum_probs=151.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|++....+ ++.....++.+|+|+++.+. .+ . ..|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~--~-----waw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ--V-----WAWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc--H-----hhcCcch-----------HHHHHHHHhHhhccCC
Confidence 45899999887644 55555678889999884431 11 0 1121110 1234678999999997
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC--CCcHHHHhhhcchhhhHHhhcCchhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF--PYMEEKRRLKHFHSEIEELLYSPVENK 537 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~ 537 (784)
.+.+. +. .. ..+..++.|++...... +... ..+
T Consensus 148 ~e~~~-------------------~~-~~-----g~~~~~vGnPv~~~~~~~~~~~~--------------------~~r 182 (385)
T TIGR00215 148 FEKAF-------------------YQ-KK-----NVPCRFVGHPLLDAIPLYKPDRK--------------------SAR 182 (385)
T ss_pred CcHHH-------------------HH-hc-----CCCEEEECCchhhhccccCCCHH--------------------HHH
Confidence 76541 11 01 23556677776332211 1111 123
Q ss_pred hhhccccCCCCCEEEEEe--cccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 538 EHLCVLKDSSKPILFTMA--RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vG--RL~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
+.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.+..+.++.
T Consensus 183 ~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 183 EKLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----------hHHHHHHHHHHhCC
Confidence 45666 56778776653 7666 6899999999999988778999877654421 12334555566666
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccc----------------ccc
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGG----------------PAE 677 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG----------------~~E 677 (784)
..+|.+++ .+...+|+ ++|++|.+| |.+.+|||+||+|+|.+. ..- .+.
T Consensus 251 ~~~v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 66677664 14566777 599999999 888889999999999872 111 222
Q ss_pred ccccCceEE-EE-CCCCHHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHH
Q 003947 678 IIVHGKSGF-HI-DPYKGDQATGILVDFFEKCKVDP----GHWDEISQGGLK 723 (784)
Q Consensus 678 iI~dg~~G~-li-~p~d~e~lAe~I~~~l~~ll~dp----~~~~~m~~~a~~ 723 (784)
++.+..-.- ++ +.-+++.+++.+. .++.|+ +.++++.+.-.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~----~ll~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALL----LLLENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHH----HHhcCCcccHHHHHHHHHHHHH
Confidence 222211111 11 2235666776665 556788 877777654443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.3e-12 Score=142.38 Aligned_cols=323 Identities=15% Similarity=0.141 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
..+..+..+.+.. ..-|+|..|+....+++..+.++. +.++.+..|..+++ ++ .++.+.....-+.
T Consensus 127 vN~~FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e--------~fr~lP~r~eiL~ 193 (474)
T PF00982_consen 127 VNRRFADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SE--------IFRCLPWREEILR 193 (474)
T ss_dssp HHHHHHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HH--------HHTTSTTHHHHHH
T ss_pred HHHHHHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HH--------HHhhCCcHHHHHH
Confidence 3334444444442 367999999999878888777764 57788888875432 21 1111112222334
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeec--CCCCCC--CceEEecCCCCCCCCCCCcH---HHHhh
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVN--GIDAFD--PKFNIVSPGADMTIYFPYME---EKRRL 519 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~--gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl 519 (784)
.|-.||.|-+.|+..+....+.....- ++-.... ++.+.. -++.+.|-|||.+.|..... ...+.
T Consensus 194 glL~aDlIgFqt~~~~~nFl~~~~r~l--------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~ 265 (474)
T PF00982_consen 194 GLLGADLIGFQTFEYARNFLSCCKRLL--------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERA 265 (474)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHS---------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHH
T ss_pred HhhcCCEEEEecHHHHHHHHHHHHHHc--------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHH
Confidence 788999999999877663333221110 0000001 122112 25677899999877643211 11111
Q ss_pred hcchhhhHHhhcCchhhhhhhccccCCC-CCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcc
Q 003947 520 KHFHSEIEELLYSPVENKEHLCVLKDSS-KPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESK 594 (784)
Q Consensus 520 ~~~~~~~~~~l~~~~~~~~~~gll~~~~-k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~ 594 (784)
. ..++.+ .+ ..+|+.+.|++..||+..=+.|+.++.+.+| ++.|+-++.... +.
T Consensus 266 ~--------------~l~~~~-----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr--~~ 324 (474)
T PF00982_consen 266 E--------------ELREKF-----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR--ED 324 (474)
T ss_dssp H--------------HHHHHT-----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S--TT
T ss_pred H--------------HHHHhc-----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC--cc
Confidence 1 111222 24 4899999999999999999999998876554 577777775333 23
Q ss_pred cHHHHHHHHHHHHHHHh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc--
Q 003947 595 DLEEQAEMKKMYGLIDT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-- 666 (784)
Q Consensus 595 d~ee~~~~~~l~~li~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP-- 666 (784)
..++.+..+++.+++.+ +|-.+ -|.++- ..++.+++..++.. +|+++.+|..+|.-++..|+.+|..+
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~ 400 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNP 400 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS-
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCC
Confidence 34444555556555554 33222 255554 36789999999995 99999999999999999999999876
Q ss_pred --EEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 667 --TFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 667 --VIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
+|.|...|.++.+.++ .++++|.|.+++|++|.++++ ..++.++...++.++++ ..+|-...++.+++-.
T Consensus 401 GvLiLSefaGaa~~L~~~--al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 401 GVLILSEFAGAAEQLSEA--ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp -EEEEETTBGGGGT-TTS---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred CceEeeccCCHHHHcCCc--cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 7779999999988553 589999999999999997663 67777777777788887 8899998888887654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-11 Score=134.09 Aligned_cols=323 Identities=14% Similarity=0.057 Sum_probs=213.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..+..+.+... .-|+|..|+....+++..+.++ ...++-+-.|..++ .+++. +.+.+-..-+..|-
T Consensus 112 ~FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFP----s~eif--------r~LP~r~eil~glL 178 (474)
T PRK10117 112 LLADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFP----TPEIF--------NALPPHDELLEQLC 178 (474)
T ss_pred HHHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCC----ChHHH--------hhCCChHHHHHHHH
Confidence 34444444432 3489999999988888877665 34677788886533 23211 11111122334788
Q ss_pred ccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH--HHhhhcchhhhH
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE--KRRLKHFHSEIE 527 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~--~~rl~~~~~~~~ 527 (784)
.||.|=+.|+..+....+.....-.. -...+......| -.-++.+.|-|||.+.|...... ..+..
T Consensus 179 ~aDlIGFqt~~y~rnFl~~~~~~lg~--~~~~~~~v~~~g---r~v~v~~~PigID~~~~~~~a~~~~~~~~~------- 246 (474)
T PRK10117 179 DYDLLGFQTENDRLAFLDCLSNLTRV--TTRSGKSHTAWG---KAFRTEVYPIGIEPDEIAKQAAGPLPPKLA------- 246 (474)
T ss_pred hCccceeCCHHHHHHHHHHHHHHcCC--cccCCCeEEECC---eEEEEEEEECeEcHHHHHHHhhchHHHHHH-------
Confidence 99999999987765333322111000 000000000011 02257788999998876432111 11111
Q ss_pred HhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHHHHHHHH
Q 003947 528 ELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMK 603 (784)
Q Consensus 528 ~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~ee~~~~~ 603 (784)
..++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++. ++.+.-.++.+...
T Consensus 247 -------~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~--psR~~v~~Y~~l~~ 312 (474)
T PRK10117 247 -------QLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP--TSRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC--CCCCccHHHHHHHH
Confidence 112222 357799999999999999999999999877665 466776653 33334455556666
Q ss_pred HHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003947 604 KMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCN 672 (784)
Q Consensus 604 ~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-----PVIaT~~ 672 (784)
++.+++.+.+- -+. |+++- ..++.+++..+|. ++|+++.++.-+|+-|+..|+.||.. .+|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 66666665432 122 44443 4678899999999 49999999999999999999999976 3788999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 673 GGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 673 GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|.++.+. ..++++|.|.+++|++|.++++ ..++.+++.-+..++.+ .++|....++.+++-..
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 99998884 3789999999999999997663 67777777777777777 88999999988887554
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-12 Score=113.56 Aligned_cols=92 Identities=20% Similarity=0.369 Sum_probs=84.9
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+++.|+...+++..++|+||||+|+|+++.+++.+++.+|..++.++ |++++++++. .+++||+.+++|+++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~----~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE----YLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH----HHHCCHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999997 8999999997 55689999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ 740 (784)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-10 Score=138.65 Aligned_cols=331 Identities=13% Similarity=0.109 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
...+..+..+.+.....-|+|..|.....+++..+.++. ..++.+..|..++ .+++ |+.+.+...-+
T Consensus 185 ~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~ei--------fr~LP~r~eiL 252 (854)
T PLN02205 185 SVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEI--------YKTLPIREELL 252 (854)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCC----ChHH--------HhhCCcHHHHH
Confidence 333444444544432223899999999888888887654 5778888887543 2322 22222222334
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC--CceEEecCCCCCCCCCCC---cHHHHhhh
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD--PKFNIVSPGADMTIYFPY---MEEKRRLK 520 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~---~~~~~rl~ 520 (784)
..|-.||.|=+.|+..+.............. ...++ ...++.+.. -++.+.|-|||...|... ++...+..
T Consensus 253 ~glL~aDlIGFht~~yar~Fl~~~~r~lgl~-~~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~ 328 (854)
T PLN02205 253 RALLNSDLIGFHTFDYARHFLSCCSRMLGLS-YESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVK 328 (854)
T ss_pred HHHhcCCeEEecCHHHHHHHHHHHHHHhCCc-ccCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHH
Confidence 5788999999999877653333211110000 00000 001122112 256778999998876432 11111111
Q ss_pred cchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCcccH
Q 003947 521 HFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDL 596 (784)
Q Consensus 521 ~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v----~LvIVG~g~~~~s~d~ 596 (784)
+.+++++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|.+ .|+-+..-. .+...
T Consensus 329 --------------~l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps--r~~~~ 389 (854)
T PLN02205 329 --------------ELIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA--RGKGK 389 (854)
T ss_pred --------------HHHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC--CcccH
Confidence 1122222 246789999999999999999999999998777754 566555432 23334
Q ss_pred HHHHHHHHHHHHHHhcC----CCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----
Q 003947 597 EEQAEMKKMYGLIDTYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----- 665 (784)
Q Consensus 597 ee~~~~~~l~~li~~l~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----- 665 (784)
++.+...++.+++.+.+ -.+ -|.++- ..++.+++..+|+ .||+++.++..+|+-|+..|+.+|..
T Consensus 390 ~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~ 465 (854)
T PLN02205 390 DVKEVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKL 465 (854)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCcccc
Confidence 45555555666665533 211 255553 3678899999999 49999999999999999999999964
Q ss_pred --------------cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003947 666 --------------PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTW 731 (784)
Q Consensus 666 --------------PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw 731 (784)
.+|.|.+.|.+..+. ..++|+|.|.+++|++|.+++. .+++.++..-++.++++ ..+|-
T Consensus 466 ~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~ 538 (854)
T PLN02205 466 DKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDV 538 (854)
T ss_pred ccccccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH
Confidence 367788888887773 3789999999999999997763 56666666666677777 88898
Q ss_pred HHHHHHHHHHHH
Q 003947 732 KIYSERLLNLSG 743 (784)
Q Consensus 732 ~~~a~~ll~ly~ 743 (784)
...++.++.-..
T Consensus 539 ~~W~~~fl~~l~ 550 (854)
T PLN02205 539 GYWARSFLQDLE 550 (854)
T ss_pred HHHHHHHHHHHH
Confidence 888888776443
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-09 Score=123.70 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
.+.......+.+..+ .=|+|..|+....+++..+..+. ..++.+..|..+++ +.+ ++.+.+...-.
T Consensus 132 ~vN~~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEv--------fr~lP~r~eIl 198 (486)
T COG0380 132 KVNRKFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEV--------FRCLPWREEIL 198 (486)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHH--------HhhCchHHHHH
Confidence 344444555555433 33999999999888888777664 45777888875432 221 11122222233
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeee-cCCCCCCCceEEecCCCCCCCCCCCcHHH---Hhhhc
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVV-NGIDAFDPKFNIVSPGADMTIYFPYMEEK---RRLKH 521 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~-~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~ 521 (784)
..+-.||.|=..++..+....+...+... ++ +.-.+. .|.+-...++...|-|+|...|....... .++.+
T Consensus 199 ~gll~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e 273 (486)
T COG0380 199 EGLLGADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE 273 (486)
T ss_pred HHhhcCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH
Confidence 47889999999998777644443322110 00 000000 11110123566789999987664321110 11111
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHH
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLE 597 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~e 597 (784)
.++.+ ..++.+|+.+.|+|..||+..=+.|+.++.+.+| ++.|+-++.... ..-.+
T Consensus 274 --------------l~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr--~~v~~ 333 (486)
T COG0380 274 --------------LKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR--EDVEE 333 (486)
T ss_pred --------------HHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc--cccHH
Confidence 11112 2348899999999999999999999999987665 456666665433 33344
Q ss_pred HHHHHHHHHHHHHhcC-CCCcEEEcc--CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEc
Q 003947 598 EQAEMKKMYGLIDTYK-LNGQFRWIS--SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFAT 670 (784)
Q Consensus 598 e~~~~~~l~~li~~l~-L~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----PVIaT 670 (784)
++.....+.+++.+.+ .-+++.|.+ +-...++..++..++.. +|+++.+++-+|+-++..|+.||-- |.|-|
T Consensus 334 y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLS 412 (486)
T COG0380 334 YQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILS 412 (486)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEe
Confidence 4445555666665543 234444433 11235788999999995 9999999999999999999999854 88889
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 671 ~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
.+.|.+..+.+ .++++|.|.+++|++|..++. .+++.+++.-+..++.+ .++|-...+..++.-.
T Consensus 413 eFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 413 EFAGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred ccccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 99998888755 789999999999999997663 67777777666777776 8888888888866543
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.5e-09 Score=116.77 Aligned_cols=323 Identities=14% Similarity=0.097 Sum_probs=169.8
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
.|||-..-.+ .++++|.++||+|. ++++...-. .. .....++.+..++.....
T Consensus 10 GTGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e------~~---l~~~~g~~~~~~~~~~l~------ 62 (352)
T PRK12446 10 GSAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIE------KT---IIEKENIPYYSISSGKLR------ 62 (352)
T ss_pred CcHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCccc------cc---cCcccCCcEEEEeccCcC------
Confidence 5788766666 67777888999998 777543211 01 111113444444432211
Q ss_pred ccccCChh---hHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhcc
Q 003947 356 ISRFEVWP---YLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLD 432 (784)
Q Consensus 356 isr~~l~~---yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~ 432 (784)
+...+. ..-.+.....+.+.-..+.+||+||++....+..+.++++.+++|++. |.-... + .
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i--~e~n~~--~--g------- 127 (352)
T PRK12446 63 --RYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLL--HESDMT--P--G------- 127 (352)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEE--ECCCCC--c--c-------
Confidence 110111 111111111111111125699999998777777788999999999764 432110 0 0
Q ss_pred ccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCC
Q 003947 433 DKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPY 512 (784)
Q Consensus 433 ~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~ 512 (784)
.+-++..+.||.|.++-+.... +++ ..|+.++.|.+..+...+.
T Consensus 128 ---------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~ 171 (352)
T PRK12446 128 ---------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGN 171 (352)
T ss_pred ---------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccccc
Confidence 1123567788888665432211 122 3577788787766543222
Q ss_pred cHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEec-ccCCCChHH-HHHHHHHhHccCCCeEEEEEeCCCC
Q 003947 513 MEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMAR-LDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRR 590 (784)
Q Consensus 513 ~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgi~~-LieA~~~l~~~~~~v~LvIVG~g~~ 590 (784)
... .++.+|+ ++++++|+.+|. .. .+.+.. +.+++..+. .+++++++.|..+
T Consensus 172 ~~~--------------------~~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~~~ 225 (352)
T PRK12446 172 REK--------------------GLAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGKGN 225 (352)
T ss_pred chH--------------------HHHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCCch
Confidence 111 1233554 566777776654 43 344433 333444443 2477776655421
Q ss_pred CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 591 KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 591 ~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
+.+....+ .++...++. .+++..+|+. +|++|.= +=+.|+.|++++|+|.|..
T Consensus 226 --------------~~~~~~~~---~~~~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~i 278 (352)
T PRK12446 226 --------------LDDSLQNK---EGYRQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLI 278 (352)
T ss_pred --------------HHHHHhhc---CCcEEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEE
Confidence 11111111 123344532 1367788884 9988874 3477899999999999987
Q ss_pred Ccc-----c----cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 671 CNG-----G----PAEIIVHGKSGFHIDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 671 ~~G-----G----~~EiI~dg~~G~li~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
... + ..+.+.+-..|..+... +++.+++.+. .++.|++.+++ ..+++....-++++.
T Consensus 279 P~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~----~ll~~~~~~~~--------~~~~~~~~~aa~~i~ 346 (352)
T PRK12446 279 PLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVE----ELSHNNEKYKT--------ALKKYNGKEAIQTII 346 (352)
T ss_pred cCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHH----HHHcCHHHHHH--------HHHHcCCCCHHHHHH
Confidence 442 1 12233344456666433 3566666665 55678765432 113344445555544
Q ss_pred HH
Q 003947 740 NL 741 (784)
Q Consensus 740 ~l 741 (784)
++
T Consensus 347 ~~ 348 (352)
T PRK12446 347 DH 348 (352)
T ss_pred HH
Confidence 43
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-08 Score=110.79 Aligned_cols=252 Identities=12% Similarity=0.124 Sum_probs=152.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+|++.....+..+.+++..+++|++..-.+.-. ...|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 45999999988777788889999999998865554322 11222 345566766443322
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.. .+.+ +.++.++.|.+..+... .+....+. .
T Consensus 147 -~~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 -LE------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred -cc------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 11 1122 55788888888776554 22222111 1
Q ss_pred ccccCCCCCEEEEEec-ccCCCChHHHH-HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 541 CVLKDSSKPILFTMAR-LDRVKNLTGLV-EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 541 gll~~~~k~iIl~vGR-L~~~Kgi~~Li-eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
+ ..++++|+.+|. .+..+ +..++ ++...+.+ +++++..+|... .+++...-.+++. +
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~-----------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND-----------LEELKSAYNELGV---V 237 (357)
T ss_pred c---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch-----------HHHHHHHHhhcCc---E
Confidence 1 125677666664 44333 33333 33333332 577777666521 2334444444443 7
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECC
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP--------AEIIVHGKSGFHIDP 690 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~--------~EiI~dg~~G~li~p 690 (784)
+..++.. ++.++|+. +|++|.=+ =++|+.|..++|+|+|--..+.. +..+++-..|.+++.
T Consensus 238 ~v~~f~~------dm~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFID------DMAALLAA-ADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHHh------hHHHHHHh-ccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 7777544 58888885 99999743 36899999999999999754433 333444456777765
Q ss_pred CC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 691 YK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 691 ~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
.+ ++.+++.|. .++++|+..++|++++++.. ..-.-+.+++.++
T Consensus 307 ~~lt~~~l~~~i~----~l~~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 307 SELTPEKLAELIL----RLLSNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred ccCCHHHHHHHHH----HHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 55 667777776 55689999999999988764 3333344444433
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-11 Score=118.01 Aligned_cols=160 Identities=15% Similarity=0.250 Sum_probs=84.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccccc
Q 003947 278 GGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWIS 357 (784)
Q Consensus 278 GG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~is 357 (784)
||.+.++. +|+++|.++||+|+ |+|...+.. ..+ ....++.+.++|+.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPE-------DDE--EEEDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GG-------G-S--EEETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCc-------ccc--cccCCceEEeccCCccchhh-----
Confidence 89999999 66667799999999 998664332 111 11236888888876542111
Q ss_pred ccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccc
Q 003947 358 RFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHF 437 (784)
Q Consensus 358 r~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~ 437 (784)
..+..+ ..+.+.+ .....+||+||+|++..++++.++++..++|+|.+.|+..... ...|. ..+
T Consensus 55 --~~~~~~----~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~-----~~~ 118 (160)
T PF13579_consen 55 --RLLRFL----RRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR----GSRWK-----RRL 118 (160)
T ss_dssp --GHCCHH----HHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH-----HHH
T ss_pred --hhHHHH----HHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh----ccchh-----hHH
Confidence 011111 1222222 2236799999999976667777777678999999999853211 01111 111
Q ss_pred cchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC
Q 003947 438 SCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG 503 (784)
Q Consensus 438 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG 503 (784)
. ...+...++.||.|+++|+..++.+.+ .|++ .+|+.|||||
T Consensus 119 ~--~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 Y--RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp H--HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred H--HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 1 123667899999999999988773222 3444 7899999998
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.22 E-value=6e-11 Score=115.74 Aligned_cols=168 Identities=17% Similarity=0.240 Sum_probs=84.0
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccc
Q 003947 275 PDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRK 354 (784)
Q Consensus 275 p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~ 354 (784)
+..||.+.++. +|+++|+++||+|+ |+|....+..... . .......+.....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~----~-------~~~~~~~~~~~~~----- 60 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE----L-------VKIFVKIPYPIRK----- 60 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST----E-------EEE---TT-SSTS-----
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh----c-------cceeeeeeccccc-----
Confidence 45799999999 66666799999999 8886644322111 0 0111111111100
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCccc-CCCCCcchhhhccc
Q 003947 355 WISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELT-KYPDSDINWKKLDD 433 (784)
Q Consensus 355 ~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~-k~~~s~~~~~~~~~ 433 (784)
...+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ..... ...
T Consensus 61 ------~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~------~~~ 123 (177)
T PF13439_consen 61 ------RFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKS------KLS 123 (177)
T ss_dssp ------S--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTT------SCC
T ss_pred ------ccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccccccccc------ccc
Confidence 0011111222334444433 899999998765444444444 99999999986521 00000 000
Q ss_pred cccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC
Q 003947 434 KYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF 510 (784)
Q Consensus 434 ~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~ 510 (784)
.+..... .......+.+|.+|++|...++.+.+ .|++ +.|+.|||||||.+.|.
T Consensus 124 ~~~~~~~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 124 PYSYLNF-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp CHHHHHH-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred hhhhhhh-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0000000 11233478999999999988874332 3444 68999999999998873
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.2e-09 Score=118.98 Aligned_cols=143 Identities=11% Similarity=0.080 Sum_probs=109.6
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+.-+++++. +..+++++++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|..+
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te----------~s~kL~~L-~~y--~nvvly~~~~~-- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE----------MSSKLMSL-DKY--DNVKLYPNITT-- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc----------ccHHHHHH-Hhc--CCcEEECCcCh--
Confidence 344566661 999999999999899999999 66643 01567777 666 56667766433
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGILVDFFEK 706 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ 706 (784)
..+-+++.+ ||+++-.|..|+|++++.||++.|+|+++.+.- |+.+++.+ |.+++++|+++++++|.+
T Consensus 339 ---~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~---- 407 (438)
T TIGR02919 339 ---QKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKD---- 407 (438)
T ss_pred ---HHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHH----
Confidence 356677775 999999999999999999999999999998444 66788766 889999999999999984
Q ss_pred hcCCHHHHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 707 ll~dp~~~~~m~~~a~~~ 724 (784)
++.||+.+++.-..-++.
T Consensus 408 lL~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 408 LLNDPNQFRELLEQQREH 425 (438)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 458997766654444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-07 Score=104.71 Aligned_cols=135 Identities=16% Similarity=0.070 Sum_probs=82.9
Q ss_pred CCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 545 DSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
+.+++++++.|.... .+-...+++++..+ +.++++ +|..... ...+.++|.+
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~-------------------~~~~~~~v~~ 292 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG-------------------AEDLPDNVRV 292 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc-------------------ccCCCCceEE
Confidence 345567788888754 23334455555443 345444 4443221 0245688999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e 694 (784)
.+ .++..+++ . .+|++|.- -| ..|+.||+++|+|+|+....+ .++.+.....|..+++. +.+
T Consensus 293 ~~----~~p~~~ll---~-~~d~~I~h---gG-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLL---P-RCAAVVHH---GG-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHh---h-hhheeeec---CC-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 56655554 4 48999964 23 479999999999999986655 24445555578777665 567
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQG 720 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~ 720 (784)
++++++.+ +++++ .+++..+.
T Consensus 361 ~l~~al~~----~l~~~-~~~~~~~~ 381 (401)
T cd03784 361 RLAAALRR----LLDPP-SRRRAAAL 381 (401)
T ss_pred HHHHHHHH----HhCHH-HHHHHHHH
Confidence 77777764 44543 44444433
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-07 Score=100.83 Aligned_cols=116 Identities=15% Similarity=0.163 Sum_probs=78.8
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+.+++++|..+.. .++++++.+ ++..++++|....+ .-.++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~---------------------~~~~ni~~~~~~- 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAAD---------------------PRPGNIHVRPFS- 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccc---------------------ccCCCEEEeecC-
Confidence 456688999987665 666766664 56889999765210 116789988643
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLT-VVEAMTCGLPTFATCNGGPAE------IIVHGKSGFHIDPY--KGDQA 696 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGlt-vlEAMA~GlPVIaT~~GG~~E------iI~dg~~G~li~p~--d~e~l 696 (784)
..++.++|+. ||++|.-+ |.+ +.||+++|+|+++-...+..| .+++-..|..+++. +++.+
T Consensus 241 ----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 ----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred ----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 2478899995 99999764 555 999999999999986655333 33344466666543 45666
Q ss_pred HHHHH
Q 003947 697 TGILV 701 (784)
Q Consensus 697 Ae~I~ 701 (784)
++.|.
T Consensus 311 ~~~l~ 315 (318)
T PF13528_consen 311 AEFLE 315 (318)
T ss_pred HHHHh
Confidence 66664
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.2e-09 Score=109.43 Aligned_cols=184 Identities=16% Similarity=0.145 Sum_probs=99.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccceeeec-
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRVEKVY- 333 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~e~v~- 333 (784)
||+++|....|- -.+||...++- .|+++|+++||+|. |+++.++....... ...+....
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999887631 37899999999 55556699999999 99988642211100 00000000
Q ss_pred -------------------CcCCeEEEEccCCCCcccccccccccCChh--------hHH---HHHHHHHHHHHHHcCCC
Q 003947 334 -------------------GTKYSDILRVPFRTEEGIVRKWISRFEVWP--------YLE---TFTEDVATEIIQELQCK 383 (784)
Q Consensus 334 -------------------~~~~v~IlrvP~~~~~~~~~~~isr~~l~~--------yl~---~f~~~~~~~i~~~~~~~ 383 (784)
..+++.++-+.-. .+.+|..++. -.+ .|...+. ++...+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~l-e~~~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAAL-ELLKKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHH-HHHCTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHH-HHHHhhCCC
Confidence 0123333332211 1222333331 122 2333333 333333568
Q ss_pred ceEEEEcCCChhHHHHHHHHhC-------CCcEEEEecCCcccCC-CCCc-----chhhh--ccccccccchhhhhHHHh
Q 003947 384 PDLIIGNYSDGNIVASLLAHKL-------DVTQCTIAHALELTKY-PDSD-----INWKK--LDDKYHFSCQFTADLFAM 448 (784)
Q Consensus 384 pDIIh~~~~~~~lva~llar~~-------gvp~V~t~H~l~~~k~-~~s~-----~~~~~--~~~~y~~~~~~~~e~~a~ 448 (784)
|||||+|.|.+++++.+++... ++|+|+|+|++..... +... +.+.. ....+.+.......+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999998876 5999999999754321 1111 11111 111122233344556789
Q ss_pred cccCEEEecChHhHhhcc
Q 003947 449 NRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 449 ~~AD~IIt~S~~~~~~~~ 466 (784)
..||.|+|+|+..+..+.
T Consensus 214 ~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp HHSSEEEESSHHHHHHTT
T ss_pred HhcCEeeeCCHHHHHHHh
Confidence 999999999999887443
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.8e-06 Score=95.52 Aligned_cols=111 Identities=18% Similarity=0.200 Sum_probs=72.8
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEEC
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEIIVHGKSGFHID 689 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI~dg~~G~li~ 689 (784)
+.++|.+.+ +++..+ +++ .+|++|..+ |. .|+.||+++|+|+|+....+- .+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457888887 555544 455 489999764 33 489999999999999744432 33344545777776
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 690 PY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 690 p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
.. +.++++++|. +++.|+++++++.+ ..+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~----~~l~~~~~~~~~~~-l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVL----AVLSDPRYAERLRK-MRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHH----HHhcCHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHh
Confidence 43 4677777776 45578887666643 334444555666666666654
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.5e-08 Score=96.33 Aligned_cols=177 Identities=19% Similarity=0.235 Sum_probs=115.1
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~ 333 (784)
|.||+||...|.|. .-||-+..+. +|+.+|+++||+|+ |.|+..... .. ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~------~~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYP------YK---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCC------CC---Cc
Confidence 35899999999865 4599999999 78888899999999 998863221 11 22
Q ss_pred CcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHH-----HHcCCCceEEEEcCCC-hhHHHHHHHHh--C
Q 003947 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEII-----QELQCKPDLIIGNYSD-GNIVASLLAHK--L 405 (784)
Q Consensus 334 ~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~-----~~~~~~pDIIh~~~~~-~~lva~llar~--~ 405 (784)
...|++++.+|.... |. ++++.-++...+. +.-+.+.|||+.+... ++++..++.+. .
T Consensus 52 ~y~gv~l~~i~~~~~-g~-------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKN-GS-------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCC-Cc-------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 335789999987542 21 1112222211111 1112357899987766 55555555443 4
Q ss_pred CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccccee
Q 003947 406 DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYR 485 (784)
Q Consensus 406 gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~ 485 (784)
|.|+++..|+++... .+|..+..+|. ...|+++.+.||.+|+.|....+-.++.
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~----------------- 171 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER----------------- 171 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-----------------
Confidence 679999999987432 25555444442 2468889999999999997765522221
Q ss_pred eecCCCCCCCceEEecCCCC
Q 003947 486 VVNGIDAFDPKFNIVSPGAD 505 (784)
Q Consensus 486 ~~~gi~~f~~k~~VIpnGvD 505 (784)
.+ ..+..+|++|+|
T Consensus 172 --y~----~~~s~~IaYGad 185 (185)
T PF09314_consen 172 --YG----RKKSTFIAYGAD 185 (185)
T ss_pred --cC----CCCcEEecCCCC
Confidence 11 368899999987
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-06 Score=97.95 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=152.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEE-EecCCcccCCCCCcchhhhccccccccchh-----hhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCT-IAHALELTKYPDSDINWKKLDDKYHFSCQF-----TADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~-----~~e~~a~~~AD~I 454 (784)
..+||+|.+- |++++.++|+..|+|+++ -.|.-.. +..+...| ...+.|+-..-. ..-++.-+.||.|
T Consensus 91 ~~~p~~v~~~---Gg~v~~~aA~~~~~p~~~~~~~esn~--~~~~~~~~-~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v 164 (396)
T TIGR03492 91 AKKGDLIVAV---GDIVPLLFAWLSGKPYAFVGTAKSDY--YWESGPRR-SPSDEYHRLEGSLYLPWERWLMRSRRCLAV 164 (396)
T ss_pred hhcCCEEEEE---CcHHHHHHHHHcCCCceEEEeeccce--eecCCCCC-ccchhhhccCCCccCHHHHHHhhchhhCEE
Confidence 4489999984 445677888888999775 2243211 11111111 111111111000 0123445678988
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
.+..+...+... .. ..++.++.|.+-........
T Consensus 165 ~~~~~~t~~~l~--------------------~~-----g~k~~~vGnPv~d~l~~~~~--------------------- 198 (396)
T TIGR03492 165 FVRDRLTARDLR--------------------RQ-----GVRASYLGNPMMDGLEPPER--------------------- 198 (396)
T ss_pred eCCCHHHHHHHH--------------------HC-----CCeEEEeCcCHHhcCccccc---------------------
Confidence 888866554111 01 23677777754222111100
Q ss_pred hhhhhhccccCCCCCE-EEEEecc--cCCCChHHHHHHHHHhHccCCCeEEEEEe-CCCCCCcccHHHHHHHHHHHHHHH
Q 003947 535 ENKEHLCVLKDSSKPI-LFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLID 610 (784)
Q Consensus 535 ~~~~~~gll~~~~k~i-Il~vGRL--~~~Kgi~~LieA~~~l~~~~~~v~LvIVG-~g~~~~s~d~ee~~~~~~l~~li~ 610 (784)
.++ ++++++ ++..|.- +..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+..+
T Consensus 199 -----~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~-----------~~~~~~~l~ 259 (396)
T TIGR03492 199 -----KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS-----------LEKLQAILE 259 (396)
T ss_pred -----ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC-----------HHHHHHHHH
Confidence 022 233444 4445543 2357888999999999765 678887765 3322 133444444
Q ss_pred hcCCC--------------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-
Q 003947 611 TYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP- 675 (784)
Q Consensus 611 ~l~L~--------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~- 675 (784)
+.+.. +++.+..+ ..+++.+++. +|++|.-| |.+..|++++|+|+|.....+.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q 327 (396)
T TIGR03492 260 DLGWQLEGSSEDQTSLFQKGTLEVLLG------RGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQ 327 (396)
T ss_pred hcCceecCCccccchhhccCceEEEec------hHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCH
Confidence 44432 22444431 2467888884 99999886 6666999999999999874433
Q ss_pred --cccccc-----CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 676 --AEIIVH-----GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 676 --~EiI~d-----g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
..+.+. | .+..+...+++.+++.+. .+++|++.+++|.++++++..+....+.+++.+.+
T Consensus 328 ~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~----~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 328 FTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVR----QLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHH----HHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 122222 3 344555667888887776 45679999988886665555444555555555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.6e-06 Score=92.59 Aligned_cols=267 Identities=16% Similarity=0.210 Sum_probs=149.4
Q ss_pred CCCceEEEEcC-CChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNY-SDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~-~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|.++. ....+.+.++|..+++|+++ +|+-..+. + ..+...+ ...-+-||...+.+.
T Consensus 91 ~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~----~~eE~~r--------~~i~~la~l~f~~t~ 153 (365)
T TIGR03568 91 RLKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----G----AIDESIR--------HAITKLSHLHFVATE 153 (365)
T ss_pred HhCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----C----CchHHHH--------HHHHHHHhhccCCCH
Confidence 34899999987 44578889999999999874 34322111 0 0111111 112334677777776
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEec-CCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVS-PGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIp-nGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
...+.. ...|++ +.++.++. +++|.-....... .....+
T Consensus 154 ~~~~~L--------------------~~eg~~--~~~i~~tG~~~iD~l~~~~~~~------------------~~~~~~ 193 (365)
T TIGR03568 154 EYRQRV--------------------IQMGED--PDRVFNVGSPGLDNILSLDLLS------------------KEELEE 193 (365)
T ss_pred HHHHHH--------------------HHcCCC--CCcEEEECCcHHHHHHhhhccC------------------HHHHHH
Confidence 655411 112444 55777664 4565432211111 112234
Q ss_pred hhccccCCC-CCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEe--CCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 539 HLCVLKDSS-KPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVG--GDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 539 ~~gll~~~~-k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG--~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
++|+ +++ +.+++.+-+-. .....+.+.+.+..+.+...++ +++. +++. +....+.+.+....
T Consensus 194 ~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~-------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 194 KLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG-------SRIINEAIEEYVNE-- 260 (365)
T ss_pred HhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC-------chHHHHHHHHHhcC--
Confidence 4665 333 34344444432 3333344444444444433334 4443 2222 11112233333211
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG 693 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~ 693 (784)
.++|.+++ +++..++..+++. ++++|--| +-.+.||.++|+|||+ .|.-+|.++.|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 46799998 7888999999996 88888543 2234899999999995 45688888888888878 4588
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
+++.+++.++ .+++.++.+ ....+.|.....++++.++
T Consensus 327 ~~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 327 EEIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 9988888742 244443332 1222457666677766553
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.1e-07 Score=84.53 Aligned_cols=123 Identities=23% Similarity=0.245 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVA 373 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~ 373 (784)
.+++.|+++|++|+ ++|...+. +.....+++.+++++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 55667799999999 88874221 1112234678888864321 1344443 22 333
Q ss_pred HHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCC-CcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhccc
Q 003947 374 TEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLD-VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRT 451 (784)
Q Consensus 374 ~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~g-vp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 451 (784)
+.+. ..+|||||+|...+ ++++.++++..+ +|++.+.|+..... .....+ .+. ...+.+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~---~~~~~~----~~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN---SSKKKK----LKK-----FIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec---CCchHH----HHH-----HHHHHHHHhC
Confidence 3333 45899999999887 788888889998 99999999864311 110100 011 1345689999
Q ss_pred CEEEecC
Q 003947 452 DFIITST 458 (784)
Q Consensus 452 D~IIt~S 458 (784)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.6e-05 Score=83.98 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEE-EEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
+.+++++|..++.+....+++++.++. .++++. |+|.+.. ..+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~----------~~~~l~~~~~~~---~~i~~~~~--- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP----------NLDELKKFAKEY---PNIILFID--- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc----------CHHHHHHHHHhC---CCEEEEeC---
Confidence 467999999998776667788887643 344443 5555432 124455555543 47888873
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
..++.++|+. +|++|.+ -|.|+.|++++|+|+|+...
T Consensus 232 ---~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ---VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ---HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3478899995 9999985 47999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00031 Score=78.10 Aligned_cols=266 Identities=14% Similarity=0.135 Sum_probs=160.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+++.--+.-...-..-+++.|+|++..---+ |+... ..|....++ -+..+...|.|++-|+.
T Consensus 121 ~~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL-------S~rS~----~~y~k~~~~--~~~~~~~i~li~aQse~ 187 (419)
T COG1519 121 KWRPKLLIIMETELWPNLINELKRRGIPLVLVNARL-------SDRSF----ARYAKLKFL--ARLLFKNIDLILAQSEE 187 (419)
T ss_pred hcCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee-------chhhh----HHHHHHHHH--HHHHHHhcceeeecCHH
Confidence 348998886544432333445677899987533212 11111 122222222 33468899999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC-CCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF-PYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~-p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+. |.+. |+. ++.+..| +..+. |.+....... ..+.+
T Consensus 188 D~~R-------f~~L-------------Ga~----~v~v~GN---lKfd~~~~~~~~~~~~--------------~~r~~ 226 (419)
T COG1519 188 DAQR-------FRSL-------------GAK----PVVVTGN---LKFDIEPPPQLAAELA--------------ALRRQ 226 (419)
T ss_pred HHHH-------HHhc-------------CCc----ceEEecc---eeecCCCChhhHHHHH--------------HHHHh
Confidence 7763 2211 221 2344333 11111 1111111111 12233
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC----
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN---- 615 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~---- 615 (784)
++ ..+++++..+. ...--+.++++...+++.+|++.+++|=..++ ..+.++++++..|+.
T Consensus 227 l~----~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~~~~r 290 (419)
T COG1519 227 LG----GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE----------RFKAVENLLKRKGLSVTRR 290 (419)
T ss_pred cC----CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh----------hHHHHHHHHHHcCCeEEee
Confidence 33 22788888876 33334558899999999999999999977653 356778888888773
Q ss_pred --------CcEEEccCcCCcCChhHHHHHHHccccEE-EeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC
Q 003947 616 --------GQFRWISSQMNRVRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVHG 682 (784)
Q Consensus 616 --------~~V~flG~~~~~v~~~el~~~la~aadvf-V~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~dg 682 (784)
+.=.++| -..+|+..+|.- +|+. |=-|+.+-=|--++|+.++|+|||.- ++..+.+-+...
T Consensus 291 S~~~~~~~~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ 364 (419)
T COG1519 291 SQGDPPFSDTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQA 364 (419)
T ss_pred cCCCCCCCCCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhc
Confidence 1113343 146799999984 7754 44566655577899999999999985 333344444455
Q ss_pred ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 683 KSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 683 ~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
..|+.++ |.+.++.++. .+.+|++.+++|++++...+.++
T Consensus 365 ga~~~v~--~~~~l~~~v~----~l~~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 365 GAGLQVE--DADLLAKAVE----LLLADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred CCeEEEC--CHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHh
Confidence 5678775 4555555553 66788999999999999988544
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-05 Score=90.20 Aligned_cols=185 Identities=12% Similarity=0.097 Sum_probs=119.8
Q ss_pred hhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 534 VENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 534 ~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
...|+.+|+ +.+..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.+++.|
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS----------GEARLRRRFAAHG 338 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------HHHHHHHHHHHTT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------HHHHHHHHHHHcC
Confidence 356788998 6666666666655 5777889999999888889999999875422 1256788888999
Q ss_pred CC-CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCceEE
Q 003947 614 LN-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII-----V-HGKSGF 686 (784)
Q Consensus 614 L~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI-----~-dg~~G~ 686 (784)
+. +++.|.+ ..+.++-.+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-....+..-+ . -|-.-+
T Consensus 339 v~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 86 7899987 5566677777774 999998754444 78999999999999985433322211 1 122223
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003947 687 HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK--YTWKIYSERLLNLSGV 744 (784)
Q Consensus 687 li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~--ytw~~~a~~ll~ly~~ 744 (784)
+. .|.++..+.-. +|..|++.+++++++-++...+. |+-+.+++.+++.|+.
T Consensus 413 IA--~s~~eYv~~Av----~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 413 IA--DSEEEYVEIAV----RLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp B---SSHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 33 36777766665 45679999999999998877544 9999999999999875
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.1e-05 Score=82.13 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAE------IIVHGKSGFHI 688 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~E------iI~dg~~G~li 688 (784)
.+++.+.++ .+ .++..+++. +|++|.-+- + .++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~~----~~-~~~~~~l~~-ad~vI~~~G---~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRI----TT-DNFKELIKN-AELVITHGG---F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEEC----Ch-HHHHHHHHh-CCEEEECCC---h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 568888873 32 478888885 999998752 2 47899999999999987765433 34555578888
Q ss_pred CCCCH
Q 003947 689 DPYKG 693 (784)
Q Consensus 689 ~p~d~ 693 (784)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 77666
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00062 Score=79.52 Aligned_cols=139 Identities=13% Similarity=0.028 Sum_probs=87.5
Q ss_pred CCEEEEEecccCC-----CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 548 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 548 k~iIl~vGRL~~~-----Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
.+++++.|..... +-+..+++|++++. .++++..++... . .+++++|...+
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~~------------------~-~~~p~Nv~i~~ 352 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEVE------------------A-INLPANVLTQK 352 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCcC------------------c-ccCCCceEEec
Confidence 4788899987532 23455556665542 466666554210 0 24578898887
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCCC--HHHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPYK--GDQA 696 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~d--~e~l 696 (784)
++|..++... . .+++||.= -| ..++.||+.+|+|+|+....+ .+..++.-..|..++..+ .+++
T Consensus 353 ----w~Pq~~lL~h-p-~v~~fItH---GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 353 ----WFPQRAVLKH-K-NVKAFVTQ---GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred ----CCCHHHHhcC-C-CCCEEEec---CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 6776665431 1 37788864 33 458999999999999974433 344444555788887654 4566
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
.++|. ++++||.+++...+-+...
T Consensus 423 ~~ai~----~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 423 VLAIV----DVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHH----HHhCCHHHHHHHHHHHHHH
Confidence 66665 5668998877665544443
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.1e-05 Score=82.71 Aligned_cols=270 Identities=15% Similarity=0.159 Sum_probs=140.6
Q ss_pred CceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 383 KPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 383 ~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
+||+|..+.-.. .+.+.++|..+++|++..--++-.... .-...+...+ ...-+-||.-++.|+..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~-----~~g~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR-----TEGMPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T-----TSSTTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc-----CCCCchhhhh--------hhhhhhhhhhccCCHHH
Confidence 899999876554 778899999999996544434322111 1001112111 12344588888999877
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
++.+. ..|++ +.++.++.| ++|.-. ....+.. . .. ...
T Consensus 134 ~~~L~--------------------~~G~~--~~rI~~vG~~~~D~l~-----~~~~~~~---~--------~~---~~~ 172 (346)
T PF02350_consen 134 RERLL--------------------QEGEP--PERIFVVGNPGIDALL-----QNKEEIE---E--------KY---KNS 172 (346)
T ss_dssp HHHHH--------------------HTT----GGGEEE---HHHHHHH-----HHHHTTC---C---------H---HHH
T ss_pred HHHHH--------------------hcCCC--CCeEEEEChHHHHHHH-----HhHHHHh---h--------hh---hhH
Confidence 66322 23555 778888855 233210 0000000 0 00 001
Q ss_pred cccc-CCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 541 CVLK-DSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 541 gll~-~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
++.. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ ...+.+.+.++++ +
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p---------~~~~~i~~~l~~~---~ 239 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP---------RGSDIIIEKLKKY---D 239 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H---------HHHHHHHHHHTT----T
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc---------hHHHHHHHHhccc---C
Confidence 2211 233444445434332 34467788888888776 7899999887533 2234445555554 3
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCCCHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
+++++. .++..++..+++. ++++|-=| | .+. ||.++|+|||.- +.|--.+.+..+.+-+ ++ .|.+
T Consensus 240 ~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~ 306 (346)
T PF02350_consen 240 NVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPE 306 (346)
T ss_dssp TEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHH
T ss_pred CEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHH
Confidence 899997 7788999999996 88887544 6 777 999999999998 5566677777775555 76 6899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
++.++|.+++ .+++.+.++.. ..+-|.=...++++.++
T Consensus 307 ~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 307 AIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp HHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred HHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 9888887655 45454444321 12345555555555554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.9e-06 Score=88.78 Aligned_cols=105 Identities=23% Similarity=0.305 Sum_probs=70.4
Q ss_pred HHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccC-ceEEEE-C--CCCHHHHHHHHHHHHHH
Q 003947 635 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEIIVHG-KSGFHI-D--PYKGDQATGILVDFFEK 706 (784)
Q Consensus 635 ~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI~dg-~~G~li-~--p~d~e~lAe~I~~~l~~ 706 (784)
++.. .|.+.|+||+||++|.|..|.-.||+|-|.|+..|+ .|.|++. .-|+.| | -..+++-.+.+.+++..
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3444 599999999999999999999999999999998886 4555543 236654 3 12445555555555533
Q ss_pred hcCCHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGG-LKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 707 ll~dp~~~~~m~~~a-~~~v~~~ytw~~~a~~ll~l 741 (784)
.. ....|+++-++. -++...-.+|+.+...|.+.
T Consensus 575 F~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~a 609 (692)
T KOG3742|consen 575 FC-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKA 609 (692)
T ss_pred HH-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence 22 344455554443 35565668888877666543
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.001 Score=73.44 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=43.5
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHH
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG---GPAEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G---G~~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
..+++- ||++|-- -|....||...|+|+|.+-.| +..+.+.+ .|.++.-.|++++.+.+.+
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHH
Confidence 356663 8899953 477789999999999987443 33344433 4788888899998886654
|
They are found in archaea and some bacteria and have no known function. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00036 Score=79.19 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=103.6
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+++.++.|..... .+.+-.++..+.+ -++++++..++.+. ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~--l~~~vi~~~~~~~~------------------~~~~~p~n~~v~~--- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALAD--LDVRVIVSLGGARD------------------TLVNVPDNVIVAD--- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhc--CCcEEEEecccccc------------------ccccCCCceEEec---
Confidence 345567777776644 3333334444444 35677777765220 1235678888887
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHGKSGFHID--PYKGDQATGI 699 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg~~G~li~--p~d~e~lAe~ 699 (784)
.++..++.. .+|++|+. -|+| ++.||+..|+|+|+-..+ ..++-+++-..|..++ ..+.+.++++
T Consensus 291 -~~p~~~~l~----~ad~vI~h---GG~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~a 361 (406)
T COG1819 291 -YVPQLELLP----RADAVIHH---GGAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAA 361 (406)
T ss_pred -CCCHHHHhh----hcCEEEec---CCcc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHH
Confidence 666666555 69999987 3544 889999999999996444 2455666667888877 5778888888
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|.+ +++|+.+++...+ ..+-..+.-..+..++.++++.+
T Consensus 362 v~~----vL~~~~~~~~~~~-~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 362 VNE----VLADDSYRRAAER-LAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHH----HhcCHHHHHHHHH-HHHHhhhcccHHHHHHHHHHHHh
Confidence 874 5578877665544 34444455666667776666544
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0014 Score=73.30 Aligned_cols=199 Identities=20% Similarity=0.192 Sum_probs=117.4
Q ss_pred CCCceEEEE-cCCChhHHHHHHHHhCCCc--EEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIG-NYSDGNIVASLLAHKLDVT--QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~-~~~~~~lva~llar~~gvp--~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||+++. -+++.|+-.....++.|++ +++.+- + .-+-|+.-. -+..-+.+|.++|.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 569999996 4555587666666777776 654432 1 111232211 11234567999888
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ -|+ .+| -++..|.|. +|.-...+... ..
T Consensus 141 fPFE~~-------~y~-------------~~g-----~~~~~VGHPl~d~~~~~~~~~--------------------~~ 175 (373)
T PF02684_consen 141 FPFEPE-------FYK-------------KHG-----VPVTYVGHPLLDEVKPEPDRA--------------------EA 175 (373)
T ss_pred CcccHH-------HHh-------------ccC-----CCeEEECCcchhhhccCCCHH--------------------HH
Confidence 877765 121 122 245566443 33321111111 11
Q ss_pred hhhhccccCCCCCE-EEEEe-cccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 537 KEHLCVLKDSSKPI-LFTMA-RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 537 ~~~~gll~~~~k~i-Il~vG-RL~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
++++ + ++++++ .+..| |-.+ .+.+..+++++..+.+.+|+.++++...... ..+.+.+.....+
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----------~~~~i~~~~~~~~ 242 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----------HEELIEEILAEYP 242 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----------HHHHHHHHHHhhC
Confidence 1223 3 455664 45556 3333 4556889999999999999999998875421 1122444555555
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..-.+.... ++-+..++. +|+.+..| |.+.+|++.+|+|.|+.
T Consensus 243 ~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 243 PDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVA 285 (373)
T ss_pred CCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEE
Confidence 443444332 356778884 88888776 99999999999999885
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.013 Score=67.65 Aligned_cols=143 Identities=10% Similarity=0.075 Sum_probs=76.1
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
...++++.|.... -..+.+-+.+..+.. .+..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~-~~~~~~~~~~~~l~~--~~~~~lw~~~~~~------------~~~~~~~-----~~~~~v~~---- 329 (459)
T PLN02448 274 GSVLYVSLGSFLS-VSSAQMDEIAAGLRD--SGVRFLWVARGEA------------SRLKEIC-----GDMGLVVP---- 329 (459)
T ss_pred CceEEEeeccccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCch------------hhHhHhc-----cCCEEEec----
Confidence 4467788887643 223333344444433 2457776654321 0111111 24565555
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC-------CCHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHG-KSGFHIDP-------YKGD 694 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg-~~G~li~p-------~d~e 694 (784)
+++..++... . +.++||.- -| -++++||+++|+|+|+-...+ ....+.+. ..|+-+.. -+.+
T Consensus 330 w~pQ~~iL~h-~-~v~~fvtH---gG-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~ 403 (459)
T PLN02448 330 WCDQLKVLCH-S-SVGGFWTH---CG-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGRE 403 (459)
T ss_pred cCCHHHHhcc-C-ccceEEec---Cc-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHH
Confidence 6666666652 1 13346643 23 348999999999999974443 34444442 35666531 2556
Q ss_pred HHHHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDP-GHWDEISQGGLK 723 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp-~~~~~m~~~a~~ 723 (784)
++++++.++ +.++ +..++|.+++.+
T Consensus 404 ~l~~av~~v----l~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 404 EIAELVKRF----MDLESEEGKEMRRRAKE 429 (459)
T ss_pred HHHHHHHHH----hcCCchhHHHHHHHHHH
Confidence 777777644 4554 334445544443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0019 Score=71.22 Aligned_cols=199 Identities=18% Similarity=0.146 Sum_probs=115.3
Q ss_pred CCCceEEEEcCC-ChhHHHHHHHHhCC--CcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIGNYS-DGNIVASLLAHKLD--VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~~~~-~~~lva~llar~~g--vp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||++++-++ +.|+-....-|+.+ +|+|+.+- + |-+-|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 569999997554 44664333444445 77765443 1 222343221 11346789999998
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ +|. ..|+ ..+.|.+ =+|.-.+.+... ..
T Consensus 144 lPFE~~-------------------~y~-k~g~-----~~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPA-------------------FYD-KFGL-----PCTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHH-------------------HHH-hcCC-----CeEEeCChhhhhccccccHH--------------------HH
Confidence 887765 121 1122 2445543 333322333322 23
Q ss_pred hhhhccccCCCC-CEEEEEec-ccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hc
Q 003947 537 KEHLCVLKDSSK-PILFTMAR-LDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TY 612 (784)
Q Consensus 537 ~~~~gll~~~~k-~iIl~vGR-L~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l 612 (784)
++++|+ +.++ .+.+..|. -.. .+....+++++.+++++.|+.++++--.... .+.+..... ..
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-----------~~~~~~~~~~~~ 245 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-----------YRRIIEEALKWE 245 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-----------HHHHHHHHhhcc
Confidence 456776 4444 44566663 222 4667788899999998999999999775521 122222222 22
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.....+... .++-+..++. ||+.+..| |.+.+|+|.+|+|.|++
T Consensus 246 ~~~~~~~~~--------~~~~~~a~~~-aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 246 VAGLSLILI--------DGEKRKAFAA-ADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred ccCceEEec--------CchHHHHHHH-hhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 211222332 2456777774 88877665 99999999999999987
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0012 Score=79.43 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=109.8
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+|+...++++-|+...|.... ++ +.+.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 520 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 596 (797)
T cd04300 520 KTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPG---YYMAKLIIKLINAVA 596 (797)
T ss_pred HHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 3456666889999999999999999988 44 4555555421 23667777765542 445556666666666
Q ss_pred Hh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+. ..+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 63 33455 788886 3334 344555447999999887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 003947 682 --GKSGFHIDPYKGDQAT 697 (784)
Q Consensus 682 --g~~G~li~p~d~e~lA 697 (784)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 789999964 445444
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0015 Score=74.77 Aligned_cols=181 Identities=13% Similarity=0.123 Sum_probs=123.2
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-C
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN-G 616 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~-~ 616 (784)
...|+ +++..++++.++ ..|-...+++.+.++.+.-|+..|++-|+|++ .+....+++++++.|+. +
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~e 489 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSE 489 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChh
Confidence 45787 555555555554 45666666666666666679999999999854 24467789999999985 7
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEEEE
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CNGGPAEIIV-HGKSGFHI 688 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-------~~GG~~EiI~-dg~~G~li 688 (784)
+++|.+ +.++++-.+.+. -+|+++=+--|-| +.|.+||+.||+||++- +.|+ .++. -|..-.+.
T Consensus 490 RL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA 561 (620)
T COG3914 490 RLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVA 561 (620)
T ss_pred heeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhc
Confidence 899998 666777777777 5999987654544 56899999999999863 2222 1222 13333344
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE--KYTWKIYSERLLNLSGV 744 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~--~ytw~~~a~~ll~ly~~ 744 (784)
+ +.++..++-. .+-.|...+++.+..-.+.... -|+.+..++++.++|..
T Consensus 562 ~--s~~dYV~~av----~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 562 D--SRADYVEKAV----AFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred C--CHHHHHHHHH----HhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 3 3444444333 3457887787776665555444 48999999999999864
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.021 Score=67.17 Aligned_cols=197 Identities=16% Similarity=0.127 Sum_probs=109.8
Q ss_pred CCCceEEEE-cCCChhHHHHHHHHhCCC--cEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIG-NYSDGNIVASLLAHKLDV--TQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~-~~~~~~lva~llar~~gv--p~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||++++ -+++.|+-....+|+.|+ |+++.+-- +-.-|+.-. -+..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcch-----------HHHHHHHhhhheec
Confidence 459999996 555558755556677785 87654431 112232211 11234567999898
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ +|+ .+| -++..|.|. +|.-...+..+ +.
T Consensus 369 fPFE~~-------------------~y~-~~g-----v~v~yVGHPL~d~i~~~~~~~--------------------~~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSP-----LRTVYLGHPLVETISSFSPNL--------------------SW 403 (608)
T ss_pred CccCHH-------------------HHH-hcC-----CCeEEECCcHHhhcccCCCHH--------------------HH
Confidence 887765 222 123 345556443 44421112211 22
Q ss_pred hhhhccccCCCCCEE-EEEe-cccC-CCChHHHHHHHH--HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh
Q 003947 537 KEHLCVLKDSSKPIL-FTMA-RLDR-VKNLTGLVEWYG--KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT 611 (784)
Q Consensus 537 ~~~~gll~~~~k~iI-l~vG-RL~~-~Kgi~~LieA~~--~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~ 611 (784)
++++|+ ++++++| +..| |-.+ .+.++.+++++. .+. ++.++++.... . ...+.+.+.++.
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~-~---------~~~~~i~~~~~~ 468 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSAN-P---------KYDHLILEVLQQ 468 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCc-h---------hhHHHHHHHHhh
Confidence 355676 4455554 5666 3333 466788888887 443 35778775332 1 112334444433
Q ss_pred cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 612 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 612 l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.+. -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 469 ~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 469 EGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred cCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 321 1233331 012367777 499999876 99999999999999985
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.01 Score=65.33 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=90.4
Q ss_pred CCcEEEccCcCCcCCh-hHHHHHHHccccEEEeCCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 003947 615 NGQFRWISSQMNRVRN-GELYRYICDTKGAFVQPAL---YEA---FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFH 687 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~-~el~~~la~aadvfV~PS~---~E~---fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~l 687 (784)
.+++..+| +... ..+...+.. .++++.-+. .++ +.+-+.|+|+||.|.+++...+..-.+.+|..-++
T Consensus 236 ~~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv 310 (373)
T COG4641 236 EPNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV 310 (373)
T ss_pred cchhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE
Confidence 34566666 3333 566666664 566555433 222 37789999999999999999999999988876555
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 688 IDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 688 i~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
. .|..++.+++. .++..++.++++++.|.+++...||.+.-+.+++....
T Consensus 311 ~--~d~kdl~~~~~----yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 311 Y--QDSKDLKEKLK----YLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred e--cCHHHHHHHHH----HHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 5 58899999997 56789999999999999999999999988877766654
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0026 Score=76.67 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=112.8
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|..-+++...++++-|+...|.... ++.. +.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 533 ~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIk~I~~va 609 (815)
T PRK14986 533 QQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASA---YYMAKHIIHLINDVA 609 (815)
T ss_pred HHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3447666888999999999999999988 5554 55554421 23678777766552 455666777777777
Q ss_pred H----hcCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 D----TYKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~----~l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+ .-.+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 334455 788886 3344 445555447999999887 89999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHH
Q 003947 682 --GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 682 --g~~G~li~p~d~e~lAe 698 (784)
++|||.|-. +.++.++
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 4555444
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.079 Score=58.90 Aligned_cols=275 Identities=15% Similarity=0.149 Sum_probs=160.8
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|..|.-.. .++++++|...++|++..--++-. .+.+|.. .. .-...-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---E~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---EI-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---HH-------HHHHHHHhhhhhcCChH
Confidence 45999998886544 667788999999998765555421 1111110 00 00112233566667776
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCC-CCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGAD-MTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD-~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
..++ +....|++ ..++.|+.|-+- .-.+. ..+.. .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iDal~~~-----~~~~~-----------~~~~~~~ 196 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVIDALLNT-----RDRVL-----------EDSKILA 196 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHHHHHHH-----Hhhhc-----------cchhhHH
Confidence 6554 22234555 667888887431 10000 00000 0000001
Q ss_pred hhccccCCC-CCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH-HhcCCC
Q 003947 539 HLCVLKDSS-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI-DTYKLN 615 (784)
Q Consensus 539 ~~gll~~~~-k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li-~~l~L~ 615 (784)
.+ +.+++ +.+++++=|-.-. +++..+++++.++.+.++++.++.--... ..+++.. ..++-.
T Consensus 197 ~~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~-------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 197 KG--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR-------------PRVRELVLKRLKNV 261 (383)
T ss_pred hh--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC-------------hhhhHHHHHHhCCC
Confidence 11 11334 4455555565533 99999999999999888777766644331 2233333 455556
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHH
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e 694 (784)
++|..+. ++...+...++.. |-+.+-= .|-..=||-..|+||++-+.+ .-+|.++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-AFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-ceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6798886 7778888888875 5333322 265678999999999997443 456766555 445554 3566
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+.+.+. .++++++..++|+.. ...|.=...++++.++...
T Consensus 330 ~i~~~~~----~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 330 NILDAAT----ELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLN 370 (383)
T ss_pred HHHHHHH----HHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHH
Confidence 6666665 566899988888753 3556666666666666553
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0021 Score=77.20 Aligned_cols=145 Identities=11% Similarity=0.024 Sum_probs=105.3
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 519 ~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 595 (798)
T PRK14985 519 QRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVA 595 (798)
T ss_pred HHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3446656788888999999999999888 5544 44444320 23678887766553 444555566666666
Q ss_pred Hhc----CCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DTY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~l----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 443 3445 788886 3344 344454447999999887 89999999999999999999999999999876
Q ss_pred --CceEEEECC
Q 003947 682 --GKSGFHIDP 690 (784)
Q Consensus 682 --g~~G~li~p 690 (784)
++|||.|-.
T Consensus 671 vG~eN~f~fG~ 681 (798)
T PRK14985 671 VGEENIFIFGH 681 (798)
T ss_pred hCcCcEEEeCC
Confidence 789999954
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0046 Score=73.73 Aligned_cols=143 Identities=16% Similarity=0.141 Sum_probs=111.3
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHH----HHHHhH-ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVE----WYGKNA-KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~Lie----A~~~l~-~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
.|+..+|+...++++-|+..+|.....+. .+..++ +..|.+.+++.|...+ .+...+.-++.+...++..+.
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP---~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP---ADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC---cchHHHHHHHHHHHHHHhhcc
Confidence 34555788999999999999998877664 334444 3346677777776654 355666777888888888877
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIV--HGKSGFHIDP 690 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~--dg~~G~li~p 690 (784)
..+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|..-+-||.-|.++|+|-.|...|+.+ ++.|||.|-.
T Consensus 556 ~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 78899996 3333 445555447999999876 8999999999999999999999999999997 8999999954
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.4 Score=54.95 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=54.8
Q ss_pred HHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003947 606 YGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVH 681 (784)
Q Consensus 606 ~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~d 681 (784)
+++.+.+.-+.+++.+. +..+..++..+++. +|++|-.-+ -..+=|+++|+|+|+-.+ -|+.+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344455443 13345688899995 999885432 156779999999999633 2333333
Q ss_pred CceEEEECC--CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 682 GKSGFHIDP--YKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 682 g~~G~li~p--~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
|...++++. -+.+++.+++. ++++|.+.+++
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~----~~~~~r~~~~~ 398 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVA----DTLGQLPALNA 398 (426)
T ss_pred CCccEEechhhCCHHHHHHHHH----HHHhCHHHHHH
Confidence 333344443 34556666665 45567654443
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.00 E-value=1.1 Score=52.35 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=62.8
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIV-HGKSGFHIDP- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~-dg~~G~li~p- 690 (784)
+++..+ +++..++... .+.++||.- -|+ ++++||+++|+|+|+-... -....+. .-..|.-+..
T Consensus 344 g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~ 413 (477)
T PLN02863 344 GLVIRG----WAPQVAILSH--RAVGAFLTH---CGW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG 413 (477)
T ss_pred CEEecC----CCCHHHHhcC--CCcCeEEec---CCc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC
Confidence 466666 6666555542 125677753 233 4899999999999996333 3344433 3357776632
Q ss_pred ----CCHHHHHHHHHHHHHHhcCCHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003947 691 ----YKGDQATGILVDFFEKCKVDPGHWD---EISQGGLKRIQEKYTWKIYSERLLNLSGVYG 746 (784)
Q Consensus 691 ----~d~e~lAe~I~~~l~~ll~dp~~~~---~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~ 746 (784)
-+.+++++++.+.+. .+++.++ ++++.+++-+.+.=+-.+..+++.+-...+|
T Consensus 414 ~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 414 ADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256777777776542 3444332 2333333333333333444455555444444
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.95 E-value=1.2 Score=51.45 Aligned_cols=156 Identities=8% Similarity=-0.036 Sum_probs=76.8
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+.. -..+.+.+.+..+....-... +++-...+.. +..+ ..-+.+.+.++. .++.+.+
T Consensus 250 ~~sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~pf~-wv~r~~~~~~--~~~~-~lp~~f~~r~~~----~g~~v~~--- 317 (442)
T PLN02208 250 PKSVVFCSLGSQII-LEKDQFQELCLGMELTGLPFL-IAVKPPRGSS--TVQE-GLPEGFEERVKG----RGVVWGG--- 317 (442)
T ss_pred CCcEEEEecccccc-CCHHHHHHHHHHHHhCCCcEE-EEEeCCCccc--chhh-hCCHHHHHHHhc----CCcEeec---
Confidence 34567788888763 244556665555422222343 3333211100 0000 001122222222 2344444
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECCC-----CHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVH-GKSGFHIDPY-----KGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~d-g~~G~li~p~-----d~e~ 695 (784)
++|..++... . +.++||.= -| -++++||+++|+|+|+-.. ......+.+ -..|..++.. +.++
T Consensus 318 -W~PQ~~iL~H-~-~v~~FvtH---cG-~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 318 -WVQQPLILDH-P-SIGCFVNH---CG-PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred -cCCHHHHhcC-C-ccCeEEcc---CC-chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHH
Confidence 5666665542 1 12345532 22 2489999999999999633 333444333 3567777542 5567
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGLKR 724 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~~~ 724 (784)
++++|.++ +.++ +..+++.+++++.
T Consensus 391 l~~ai~~~----m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 391 LSNAIKSV----MDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred HHHHHHHH----hcCCchhHHHHHHHHHHH
Confidence 77777654 4554 3445555555443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0054 Score=61.19 Aligned_cols=108 Identities=22% Similarity=0.342 Sum_probs=61.3
Q ss_pred HHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEe----cCCccc-CCCCCcchhhhccccccccchhhhhHH
Q 003947 373 ATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIA----HALELT-KYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 373 ~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~----H~l~~~-k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
+..+++. +..||||++|..+|.. ..++... ++|++.-+ |.-... .+ +... -.......+...+.+.-+.
T Consensus 57 ~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g~d~~F-Dpe~-p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 57 ARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASGADVGF-DPEF-PPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCCCcCCC-CCCC-CCCHHHHHHHHHHhHHHHH
Confidence 3344443 6689999999988733 3345444 67766322 111100 00 0000 0111222233333345567
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCC
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY 509 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f 509 (784)
++..||..|+.|.-.+. +| |. .+.+|+.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 89999999999977665 11 22 235699999999999764
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=1.3 Score=51.03 Aligned_cols=156 Identities=8% Similarity=0.011 Sum_probs=79.1
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+... .-+.+.|....+......+-.|+. ...... +..+ ..-+.+.+.++.. + ..+.|
T Consensus 251 ~~sVvyvsfGS~~~~-~~~q~~e~a~gL~~s~~~Flwvvr-~~~~~~--~~~~-~lp~~f~~r~~~~---g-~vv~~--- 318 (446)
T PLN00414 251 PGSVVFCAFGTQFFF-EKDQFQEFCLGMELTGLPFLIAVM-PPKGSS--TVQE-ALPEGFEERVKGR---G-IVWEG--- 318 (446)
T ss_pred CCceEEEeecccccC-CHHHHHHHHHHHHHcCCCeEEEEe-cCCCcc--cchh-hCChhHHHHhcCC---C-eEEec---
Confidence 345567788887643 234666655555443333333332 210100 0000 0111233333322 2 33334
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-----CCHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIV-HGKSGFHIDP-----YKGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~-dg~~G~li~p-----~d~e~ 695 (784)
+++..++.+. . +.++||.- -| -++++||+++|+|+|+.... -.+..+. .-..|..+.. -+.++
T Consensus 319 -w~PQ~~vL~h-~-~v~~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 391 (446)
T PLN00414 319 -WVEQPLILSH-P-SVGCFVNH---CG-FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKES 391 (446)
T ss_pred -cCCHHHHhcC-C-ccceEEec---Cc-hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHH
Confidence 5566665542 1 23567753 23 35899999999999997433 3344553 4457777743 35677
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGLKR 724 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~~~ 724 (784)
+++++.+++ .++ +..+++.+++++.
T Consensus 392 i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 392 LRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 777776544 454 4455555555544
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0087 Score=72.07 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=108.9
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHH---HHHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVE---WYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-Lie---A~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+++...++++-|+..+|.... ++. .+.++++.. ....+++.|...+. +...+.-++.+..++
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 593 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPG---YHMAKLIIKLINSVA 593 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCC---cHHHHHHHHHHHHHH
Confidence 3456666888889999999999999888 554 455554421 13577777766542 444555566666666
Q ss_pred Hh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+. ..+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 43 22455 788886 3344 344444447999999887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHHH
Q 003947 682 --GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 682 --g~~G~li~p~d~e~lAe 698 (784)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 789999964 4555443
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.80 E-value=1.5 Score=50.56 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=55.5
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----NGGPAEIIVH-GKSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~----~GG~~EiI~d-g~~G~li~ 689 (784)
.+++...+ +++..++... . +.++||.= -| -++++||+.+|+|+|+.. ....+..+.+ -..|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35666666 6777676653 1 13456642 23 348999999999999863 3334555544 24677765
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 690 PYKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 690 p~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
.-+.+++++++.++ +.|++++++
T Consensus 397 ~~~~~~l~~~v~~~----l~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKV----MEDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHH----hCCHHHHHH
Confidence 55778888888754 467665443
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.73 E-value=1.8 Score=50.44 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=49.6
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cc-cccccCceEEEECC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PA-EIIVHGKSGFHIDP 690 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~-EiI~dg~~G~li~p 690 (784)
+++.+.+ ++|..++... . +.++||.= -|+ ++++||+.+|+|+|+....+ .+ ..++.-..|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555555 6666665531 1 34556642 333 48999999999999974332 33 33444346766641
Q ss_pred -------------CCHHHHHHHHHHHHHHhcCCHHHHH
Q 003947 691 -------------YKGDQATGILVDFFEKCKVDPGHWD 715 (784)
Q Consensus 691 -------------~d~e~lAe~I~~~l~~ll~dp~~~~ 715 (784)
-+.++++++|.+++. .++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~ 446 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRK 446 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHH
Confidence 256677777765441 2555444
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.25 Score=53.60 Aligned_cols=169 Identities=11% Similarity=0.014 Sum_probs=114.6
Q ss_pred CCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.++.+-+|+ =|+..++..+++++.+... .++++++.=+-|. -..++++++.+..+++--.++++.+- +
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 355566665 4677888888888877643 6788887765542 01367788888888887667888886 5
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.++.+|-.++++. +|+.++-- +-+|.|+ +.=.+..|+||+.+ +..-..++.+.|..- +++..+.+ ..+.
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~V-lf~~d~L~---~~~v--- 284 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPV-LFTGDDLD---EDIV--- 284 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeE-EecCCccc---HHHH---
Confidence 8889999999995 99888764 5788885 45579999999998 555566766666443 34433221 1111
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 705 EKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 705 ~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+..++|...-++.+. |+-+.+.+.+.+++..
T Consensus 285 ------~e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 285 ------REAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ------HHHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 0112334455555663 9989999988888764
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.70 E-value=1.8 Score=50.08 Aligned_cols=93 Identities=13% Similarity=0.160 Sum_probs=55.3
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC-
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHG-KSGFHID- 689 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg-~~G~li~- 689 (784)
++....+ +++..++... . +.++||.- -|+ ++++||+++|+|+|+... ...+..+.+. ..|+-++
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 4555555 7777776653 1 24457753 233 489999999999999633 3334444433 4777663
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 690 PYKGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 690 p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.-+.+++++++.++ +.+++ .+++.+++++
T Consensus 394 ~~~~~~v~~av~~l----m~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 394 DLDRGAVERAVKRL----MVEEE-GEEMRKRAIS 422 (451)
T ss_pred cccHHHHHHHHHHH----HcCCc-HHHHHHHHHH
Confidence 23567788777654 45654 3444444443
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.55 E-value=2.3 Score=49.30 Aligned_cols=133 Identities=11% Similarity=0.118 Sum_probs=69.9
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
...+.++.|.+... .-+.+-+++..+... ..+|++ ++.... ..+. +.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~--~~~~------~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEK--AQNV------QVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCcc--ccch------hhHHhhcc----CCCeEEEe---
Confidence 45678888887542 334555555555543 335444 332111 0011 11222211 13333344
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC------CCHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVH-GKSGFHIDP------YKGD 694 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~d-g~~G~li~p------~d~e 694 (784)
+++..++... . +.++||.= -|+ ++++||+++|+|+|+-...+ .+..+.+ -..|..++. -+.+
T Consensus 331 -w~PQ~~iL~h-~-~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 403 (456)
T PLN02210 331 -WSPQEKILSH-M-AISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVE 403 (456)
T ss_pred -cCCHHHHhcC-c-CcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHH
Confidence 6666665542 1 12466653 233 38999999999999964333 3445544 457877742 2567
Q ss_pred HHHHHHHHHH
Q 003947 695 QATGILVDFF 704 (784)
Q Consensus 695 ~lAe~I~~~l 704 (784)
++++++.+++
T Consensus 404 ~l~~av~~~m 413 (456)
T PLN02210 404 EVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHh
Confidence 7777777544
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.081 Score=58.92 Aligned_cols=91 Identities=15% Similarity=0.053 Sum_probs=57.6
Q ss_pred CCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 548 KPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+.+..|.-. -.+.+..+++++.++.+.. ..+++.|.... +.+.+...+. ..+.+++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~~------------~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFKG------------KDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCcH------------HHHHHHHhcC---CCcEEec---
Confidence 34455566432 2366677789998887643 67777765411 2233333322 2344443
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
+.+.+++ ++|+.+..| |.+.+|++.+|+|.|..
T Consensus 228 ------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 ------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred ------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3466777 499888776 98989999999999985
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.28 Score=59.40 Aligned_cols=302 Identities=14% Similarity=0.118 Sum_probs=169.6
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccch
Q 003947 362 WPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQ 440 (784)
Q Consensus 362 ~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~ 440 (784)
|.....+.......+.+.++ .-|+|..|.....++..++... ..+++-+-.|+-. +.+.++ +....
T Consensus 120 w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspf----pssEi~--------r~lp~ 186 (732)
T KOG1050|consen 120 WKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPF----PSSEIY--------RCLPV 186 (732)
T ss_pred HHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCC----ChHHHH--------Hhccc
Confidence 43333344555566666656 7888888887766655555554 3455545666532 212111 11111
Q ss_pred hhhhHHHhcccCEEEecChHhHhhcccc-----ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH
Q 003947 441 FTADLFAMNRTDFIITSTFQEIAGSKDT-----VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE 515 (784)
Q Consensus 441 ~~~e~~a~~~AD~IIt~S~~~~~~~~~~-----vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 515 (784)
...-+..+..+|.|=..+++.+...... .-.+.+ .|...+ ....|. ...+.++|-|+|...|......
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~--v~~rgr---~~~v~~~pigid~~r~v~~~~~ 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAG--VSGRGR---DVSVKALPIGIDVQRFVKLLEL 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcce--EEeccc---eeeeeecccccchHHhhccccc
Confidence 1112234566666655444332210000 000000 000000 001111 2346677888888776543221
Q ss_pred HHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccC----CCeEEEEEeCCCCC
Q 003947 516 KRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGDRRK 591 (784)
Q Consensus 516 ~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~----~~v~LvIVG~g~~~ 591 (784)
..... | ...+.-. ..++.+|+-+-|++..||+..=+.++.++.+.+ +.+.++.+......
T Consensus 260 ~~~~~--~-------------~~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~ 323 (732)
T KOG1050|consen 260 PYVGS--K-------------GMEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT 323 (732)
T ss_pred hhHHH--H-------------HHHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc
Confidence 11000 0 0011111 247788999999999999988888888776554 45677777665442
Q ss_pred CcccH-HHHHHHHHHHHHHHh-cCC--CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC---
Q 003947 592 ESKDL-EEQAEMKKMYGLIDT-YKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG--- 664 (784)
Q Consensus 592 ~s~d~-ee~~~~~~l~~li~~-l~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~G--- 664 (784)
+.++- +..........-+++ .+- ...|+++- ..++..++.++++ .+|++...++-+|..++.+|+.+|.
T Consensus 324 ~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~ 399 (732)
T KOG1050|consen 324 DGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENK 399 (732)
T ss_pred cchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhccc
Confidence 11111 112222222222221 221 12344332 3677889999998 5999999999999999999999985
Q ss_pred -CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 665 -LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 665 -lPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
.+.|.+.+-|..+..+++ ..+++|.|.++++..|..++.
T Consensus 400 ~~~lVlsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 400 KSVLVLSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred CCceEEeeecccccccccc--CEEECCcchHHHHHHHHHHhh
Confidence 778889999998887664 678999999999999987653
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.23 Score=59.52 Aligned_cols=144 Identities=14% Similarity=0.116 Sum_probs=92.1
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGL----VEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID 610 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~ 610 (784)
+.|+.-+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+. |...++.++.+.++++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~---d~~gK~iIk~I~~va~ 511 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG---DYMGKEIIKLINNVAE 511 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT----HHHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHHH
Confidence 3455447788888999999999998883 3555566543 124778888876553 4455556666666554
Q ss_pred h----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003947 611 T----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH- 681 (784)
Q Consensus 611 ~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d- 681 (784)
. ..+.+ +|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 512 ~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 512 VINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 3 33445 789986 3444 455555557999999886 89999999999999999999999999999864
Q ss_pred -CceEEEECC
Q 003947 682 -GKSGFHIDP 690 (784)
Q Consensus 682 -g~~G~li~p 690 (784)
.+++|++-.
T Consensus 587 G~eN~fiFG~ 596 (713)
T PF00343_consen 587 GEENIFIFGL 596 (713)
T ss_dssp -GGGSEEES-
T ss_pred CCCcEEEcCC
Confidence 457888853
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.24 E-value=3.3 Score=47.88 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=55.6
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----NGGPAEIIVHG-KSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~----~GG~~EiI~dg-~~G~li~ 689 (784)
.+++.+.+ +++..++... . +.++||.- -| .++++||+++|+|+|+-. ..-....+.+. ..|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H-~-~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSN-K-AIGCFMTH---CG-WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCC-C-ccceEEec---Cc-cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 6776665552 1 13466643 12 468999999999999963 33344555542 4666654
Q ss_pred CC------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 690 PY------KGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 690 p~------d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.. +.+++++++.+++ .+++ .++|.+++.+
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 21 4677888887544 4543 2445444444
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.12 E-value=4 Score=47.64 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=29.8
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
.+++..+ +++..++.. .. ++||.= -| -++++||+++|+|+|+...
T Consensus 345 ~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 345 KGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred CCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccc
Confidence 4566666 666655554 24 346643 23 3589999999999999744
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.23 Score=52.92 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=78.2
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.+-+++++|.=|+ ||++. +.++.+.+. ++++.||-+... ...+.+.+.+ ...+++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~---------p~l~~l~k~~---~~~~~i~~~~---- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSN---------PTLKNLRKRA---EKYPNINLYI---- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCC---------cchhHHHHHH---hhCCCeeeEe----
Confidence 4457888887665 76543 444445442 367666554222 1123344444 3456777764
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CceEEEECCCCHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP--TFA--TCNGGPAEIIVH----GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP--VIa--T~~GG~~EiI~d----g~~G~li~p~d~e~lAe 698 (784)
..+++.+++.+ +|+.+... |.|+.||...|+| +++ .+.-..+..... ...|++.+ ..+...
T Consensus 217 --~~~dma~LMke-~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHHH
Confidence 34578899986 88887654 9999999999999 333 222222222211 12455532 233333
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGG 721 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a 721 (784)
.+. .+.+|+..+..++..+
T Consensus 286 ~~~----~i~~d~~~rk~l~~~~ 304 (318)
T COG3980 286 EIL----QIQKDYARRKNLSFGS 304 (318)
T ss_pred HHH----HhhhCHHHhhhhhhcc
Confidence 333 4557888777665543
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.41 Score=52.62 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=87.1
Q ss_pred CCCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+++.-+.+|+ -++..+.-.+++++.+.. ..++++++-=+-+. ...++++++.+..+++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 3455555665 567788888888777633 35677766544332 12367788888888876667888775
Q ss_pred CcCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccc-ccccccC
Q 003947 626 NRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGP-AEIIVHG 682 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~dg 682 (784)
+.++.+|-.++++. +|+.++... -.|.| ++.=.+.+|+||+.+...-. .++.+.+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC
Confidence 48889999999996 999999864 78888 45568999999999865555 4444444
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.87 E-value=5.1 Score=46.78 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=56.0
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccC-ceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHG-KSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg-~~G~li~ 689 (784)
.+++...+ +++..++... . +.++||.- -| -++++||+.+|+|+|+...- .....+.+. ..|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45566555 6666666542 2 35667753 23 34899999999999996333 334444443 5677662
Q ss_pred -----C--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 690 -----P--YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 690 -----p--~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
. -+.+++++++.+++ .+++ .++|.++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHHH
Confidence 1 14677777777554 4432 34555555544
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.053 Score=47.71 Aligned_cols=72 Identities=17% Similarity=0.097 Sum_probs=49.1
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t 412 (784)
+.|.+++.+|+..-- +....|.+-....-+...+. +++.||||+|...+ ..-+.+-|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~~--------~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVFY--------NQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhhh--------cCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 347899999986531 23334433333222333333 45899999999876 447888899999999999
Q ss_pred ecCCc
Q 003947 413 AHALE 417 (784)
Q Consensus 413 ~H~l~ 417 (784)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99974
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=95.58 E-value=6.4 Score=45.86 Aligned_cols=107 Identities=15% Similarity=0.080 Sum_probs=60.8
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCC------CHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHGKSGFHIDPY------KGDQA 696 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg~~G~li~p~------d~e~l 696 (784)
+++..++... . +.++||.= -| -++++||+++|+|+|+... ......+.+-..|..++.. +.+++
T Consensus 346 W~PQ~~IL~H-~-~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i 419 (472)
T PLN02670 346 WVPQVKILSH-E-SVGGFLTH---CG-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSV 419 (472)
T ss_pred cCCHHHHhcC-c-ccceeeec---CC-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHH
Confidence 5566565542 1 23346642 22 3589999999999999733 3344455555678877532 46777
Q ss_pred HHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDP---GHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp---~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++.++ +.++ +++++ .++-++.+.+.=+-..+++.+.+....
T Consensus 420 ~~av~~v----m~~~~g~~~r~~-a~~l~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 420 AESVRLA----MVDDAGEEIRDK-AKEMRNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHH----hcCcchHHHHHH-HHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence 7777654 4454 23322 222333344555566666666665543
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.40 E-value=1.6 Score=47.41 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHH
Q 003947 652 AFGLTVVEAMTCGLPTFATCNG---GPAEIIVHGKSGFHIDPYKGDQATGILV 701 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~G---G~~EiI~dg~~G~li~p~d~e~lAe~I~ 701 (784)
+-|.-.-||...|+|.|.+.-| +..+...+ .|.++..+|+.+..+...
T Consensus 259 ~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~~s~~~~~~~~~a~ 309 (346)
T COG1817 259 AGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLYHSTDEIAIVEYAV 309 (346)
T ss_pred CCchHHHHHHHhCCceEEecCCccccccHHHHh--cCceeecCCHHHHHHHHH
Confidence 3466678999999999988644 33444433 588888788876555554
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.35 E-value=1.5 Score=48.23 Aligned_cols=109 Identities=16% Similarity=0.126 Sum_probs=65.0
Q ss_pred CCCCEEEEEecccCCC--ChH---HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE-E
Q 003947 546 SSKPILFTMARLDRVK--NLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF-R 619 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~K--gi~---~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V-~ 619 (784)
+.+.+.+.+|.=.+.- +-+ .+++.+..+.+... ..+.|..+.... + +..+.+.+.. +-.+.+ .
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp-----~--~~~~~L~~~~---~~~~~~~~ 213 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP-----P--EAEAALRELL---KDNPGVYI 213 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc-----H--HHHHHHHHhh---cCCCceEE
Confidence 4455667788643322 222 56666666665544 788888876431 1 2223333333 234566 5
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
|-+ . +..-+..+++. +|.++++... -.-+-||.++|+||..-...+
T Consensus 214 ~~~--~---~~nPy~~~La~-ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 214 WDG--T---GENPYLGFLAA-ADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ecC--C---CCCcHHHHHHh-CCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 532 2 22336678884 9999988542 224789999999999987766
|
The function of this family is unknown. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.96 E-value=5.1 Score=44.32 Aligned_cols=106 Identities=16% Similarity=0.153 Sum_probs=62.2
Q ss_pred CCCEEEEEecccCCCChHHHHH---HHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 547 SKPILFTMARLDRVKNLTGLVE---WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~Lie---A~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+..+++++|. -.-|-+.+-. |+..+....+ .-++|.|...+. ++.+++ .....-.++|..+-+
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP~--------~~r~~l---~~~A~~~p~i~I~~f 284 (400)
T COG4671 219 GFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMPE--------AQRQKL---LASAPKRPHISIFEF 284 (400)
T ss_pred cceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCCH--------HHHHHH---HHhcccCCCeEEEEh
Confidence 4567788874 3344433333 3333333322 236666766541 233333 333344567877765
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAE 677 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~E 677 (784)
.. ++..+++. |+..|.=+ |+ +|+-|-++.|||-+.-..+.+.|
T Consensus 285 ~~------~~~~ll~g-A~~vVSm~---GY-NTvCeILs~~k~aLivPr~~p~e 327 (400)
T COG4671 285 RN------DFESLLAG-ARLVVSMG---GY-NTVCEILSFGKPALIVPRAAPRE 327 (400)
T ss_pred hh------hHHHHHHh-hheeeecc---cc-hhhhHHHhCCCceEEeccCCCcH
Confidence 44 67888885 88888653 22 58899999999998875555444
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=94.73 E-value=1.5 Score=46.78 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=77.1
Q ss_pred EEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHH----------HHHhcCC--CCcEE
Q 003947 552 FTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYG----------LIDTYKL--NGQFR 619 (784)
Q Consensus 552 l~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~----------li~~l~L--~~~V~ 619 (784)
.|+||....||...+++.-++..+. +...-++-|-... + +-+.-... .+.+..+ .+-+.
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS-----~---A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~ 257 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERS-----P---AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVP 257 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SS-----T---HHHHHHHTT--EEEE-CTGGGG---SSS--EE
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcC-----C---ceeeeecCCcccccCccccccCcccCCCCcce
Confidence 7999999999999999988875543 6777777774321 1 11110000 0111112 12366
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCceE
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCNGGPAE-------IIVHGKSG 685 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMA~Gl-PVIaT~~GG~~E-------iI~dg~~G 685 (784)
.+| +.-++|....++. ....++-+. -+..-.+-+|..|||. ||+-+..|.... ++.+..+.
T Consensus 258 v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~ 332 (355)
T PF11440_consen 258 VYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSA 332 (355)
T ss_dssp EES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-
T ss_pred ecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcce
Confidence 666 5567788888986 544444332 3557788999999997 888887775544 23334467
Q ss_pred EEECCCCHHHHHHHHHHH
Q 003947 686 FHIDPYKGDQATGILVDF 703 (784)
Q Consensus 686 ~li~p~d~e~lAe~I~~~ 703 (784)
+.+|.+|.++..++|.+.
T Consensus 333 I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 333 IYFDENDLESTVEKLIEV 350 (355)
T ss_dssp EEE-TTSHHHHHHHHHHH
T ss_pred eEeccchHHHHHHHHHHH
Confidence 889999999999998743
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=94.65 E-value=12 Score=43.80 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=47.1
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEECC-
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEII-VHGKSGFHIDP- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI-~dg~~G~li~p- 690 (784)
.+.+.+ +++..++...- +.+.||.- -| -++++||+.+|+|+|+.... .....+ +.-..|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~--~vg~FitH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQ--AVGGFLTH---CG-WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCc--ccCeeEec---Cc-hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 356555 66666655521 12345543 22 35899999999999997433 334454 24446777753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003947 691 ---YKGDQATGILVDFF 704 (784)
Q Consensus 691 ---~d~e~lAe~I~~~l 704 (784)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 25677777776544
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.51 Score=52.69 Aligned_cols=133 Identities=11% Similarity=0.139 Sum_probs=65.0
Q ss_pred hhhccccCCCCCEEEEEecccCCCCh------HHHH--HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNL------TGLV--EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi------~~Li--eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
+.+|+ +.++.+|+|+-........ ...+ +.+. ....+++.+++-..- .+....
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp---------------~~~~~~ 244 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHP---------------NMKKKF 244 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTTTEEEEE--SH---------------HHHTT-
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCCCcEEEEEeCc---------------hhhhch
Confidence 44565 6677899999765432222 1222 2222 223467888776532 111111
Q ss_pred Hh-cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc--Cc-------ccccccc
Q 003947 610 DT-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT--CN-------GGPAEII 679 (784)
Q Consensus 610 ~~-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT--~~-------GG~~EiI 679 (784)
.. ....++|.++. +..+++.++.. +|++|. -++-++.|++.+++|||.. +. |...+ .
T Consensus 245 ~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~ 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVS------DNEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-Y 311 (369)
T ss_dssp ---TT-TTTEEE-T------T-S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--T
T ss_pred hhhhccCCcEEECC------CCCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-h
Confidence 11 34457788875 12378899985 999995 3566999999999999964 33 22222 2
Q ss_pred ccCceEEEECCCCHHHHHHHHHHHH
Q 003947 680 VHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 680 ~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.+...|-.+ .+.+++.++|.+++
T Consensus 312 ~~~~pg~~~--~~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIV--YNFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EE--SSHHHHHHHHTTHH
T ss_pred HhhCCCcee--CCHHHHHHHHHhhh
Confidence 223345555 47888888887544
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.18 E-value=13 Score=39.76 Aligned_cols=113 Identities=8% Similarity=0.048 Sum_probs=64.0
Q ss_pred CCCCCEEEEEecccCCCCh--HHHHHHHHHhHcc--CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh-cCCCCcEE
Q 003947 545 DSSKPILFTMARLDRVKNL--TGLVEWYGKNAKL--RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT-YKLNGQFR 619 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi--~~LieA~~~l~~~--~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~-l~L~~~V~ 619 (784)
.+..++-+++|.-.+.-.. +.+.+....+.+. .....+++--+... -+..+.+++. +.-..-+.
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT-----------p~~~~s~l~~~l~s~~~i~ 227 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT-----------PDTVKSILKNNLNSSPGIV 227 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC-----------cHHHHHHHHhccccCceeE
Confidence 4566777888866554433 2222222222211 13466776665433 1344555554 55455678
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP 675 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~ 675 (784)
|-+.-++.. -...+++ +||.++.+...= .-.-||.+.|+||++-.-.+.
T Consensus 228 w~~~d~g~N---PY~~~La-~Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 228 WNNEDTGYN---PYIDMLA-AADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eCCCCCCCC---chHHHHh-hcceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 876433322 2455677 599999886522 235799999999998654433
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=90.88 E-value=20 Score=38.17 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=62.1
Q ss_pred CCCCCEEEEEecccCC-------CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-CCCC
Q 003947 545 DSSKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-KLNG 616 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~-------Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~L~~ 616 (784)
..++++|+++...... .+...+.+.+..+.+..|+++++|-=. |...... + .....+. +. .
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~H-P~~~~~~-------~--~~~~~~~~~~-~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPH-PDERGGN-------K--YSYLEELPNL-P 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEEC-chhhCCC-------C--hhHhhhhhcC-C
Confidence 5678888888877653 244566777777777677888876543 3210000 0 0222222 33 3
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
++.++. +...++.++.. +|.++.-+ +.+-+||+.+|+||++-
T Consensus 183 ~~~~~~------~~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 183 NVVIID------DDVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CeEEEC------CCCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 344442 12356777775 66655433 66899999999999995
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.086 Score=51.90 Aligned_cols=91 Identities=13% Similarity=0.170 Sum_probs=55.3
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG--------PAEIIVHGKSGFH 687 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG--------~~EiI~dg~~G~l 687 (784)
.+|.++++.+ ++..+++. +|++|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6788888544 47788885 99888743 2479999999999998865555 1222223223444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003947 688 IDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGG 721 (784)
Q Consensus 688 i~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a 721 (784)
+... +++.+.++|. .++.++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i~----~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIE----ELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHH----CHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHH----HHHcCcHHHHHHHHHH
Confidence 3322 3456666665 6778888777666554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.93 Score=52.74 Aligned_cols=136 Identities=8% Similarity=0.033 Sum_probs=72.2
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..++++.|.+.. ...+..++++.+.-+..|. ++++.-.+.. .-.+++++....
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~--------------------~~~l~~n~~~~~--- 329 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEP--------------------PENLPKNVLIVK--- 329 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSH--------------------GCHHHTTEEEES---
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccccc--------------------cccccceEEEec---
Confidence 34567888898753 2333333333332222344 6666655521 011235676665
Q ss_pred CcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCCC--HHHHHH
Q 003947 626 NRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHGKSGFHIDPYK--GDQATG 698 (784)
Q Consensus 626 ~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg~~G~li~p~d--~e~lAe 698 (784)
++|..++.. + ..++||.= |=-.++.||+.+|+|+|+-.. ...+..+++-..|..++..+ .+++.+
T Consensus 330 -W~PQ~~lL~---hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 401 (500)
T PF00201_consen 330 -WLPQNDLLA---HPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRA 401 (500)
T ss_dssp -S--HHHHHT---STTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHH
T ss_pred -cccchhhhh---cccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHH
Confidence 777666543 2 23456642 223579999999999999733 33455555555788887554 455666
Q ss_pred HHHHHHHHhcCCHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEIS 718 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~ 718 (784)
+|. ++++|+.+++...
T Consensus 402 ai~----~vl~~~~y~~~a~ 417 (500)
T PF00201_consen 402 AIR----EVLENPSYKENAK 417 (500)
T ss_dssp HHH----HHHHSHHHHHHHH
T ss_pred HHH----HHHhhhHHHHHHH
Confidence 665 5557887665443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=88.60 E-value=3 Score=44.59 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=61.5
Q ss_pred EEEEEecccCCCC--hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 550 ILFTMARLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 550 iIl~vGRL~~~Kg--i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.| .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~----~ 186 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE-----------RELAEEIAAALGGPRVVNLAG----K 186 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh-----------HHHHHHHHHhcCCCccccCcC----C
Confidence 4444544344444 45777777777664 789999987532 222333344433223345566 5
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.+..++..+++. +|++|.+. + | ++-=|.+.|+|+|+-
T Consensus 187 ~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 187 TSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 567899999996 99999873 2 3 344456999999985
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.22 E-value=65 Score=37.42 Aligned_cols=154 Identities=8% Similarity=0.033 Sum_probs=77.1
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+.. -.-+.+-+.+..|......+..|+- .+.... +.. ...-+.+.+.++. .+ +...|
T Consensus 256 ~~sVvyvsfGS~~~-~~~~q~~ela~gL~~s~~pflwv~r-~~~~~~--~~~-~~lp~~f~~r~~g---rG-~v~~~--- 323 (453)
T PLN02764 256 PDSVVFCALGSQVI-LEKDQFQELCLGMELTGSPFLVAVK-PPRGSS--TIQ-EALPEGFEERVKG---RG-VVWGG--- 323 (453)
T ss_pred CCceEEEeeccccc-CCHHHHHHHHHHHHhCCCCeEEEEe-CCCCCc--chh-hhCCcchHhhhcc---CC-cEEeC---
Confidence 44566778887743 2335556655555443334554443 211100 000 0000111111221 12 34444
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC-----CCHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVH-GKSGFHIDP-----YKGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~d-g~~G~li~p-----~d~e~ 695 (784)
++|..++... . +.++||.- -| -++++||+.+|+|+|+-...+ .+..+.+ -..|+.+.+ -+.++
T Consensus 324 -W~PQ~~vL~h-~-~v~~FvtH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~ 396 (453)
T PLN02764 324 -WVQQPLILSH-P-SVGCFVSH---CG-FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKES 396 (453)
T ss_pred -CCCHHHHhcC-c-ccCeEEec---CC-chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHH
Confidence 6666676653 1 24567753 23 358999999999999974433 3445533 346666533 25677
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGL 722 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~ 722 (784)
+++++.+++ .++ +..+++.++++
T Consensus 397 i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 397 LRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHHh----cCCchhHHHHHHHHH
Confidence 777776544 454 33444444443
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=86.93 E-value=5.9 Score=44.00 Aligned_cols=103 Identities=9% Similarity=0.027 Sum_probs=64.1
Q ss_pred CCCEEEEEecccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 547 SKPILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ +|. +...++.+.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e------~e~---~~~~~i~~~~~~~~~~~l~g-- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK------DDL---ACVNEIAQGCQTPPVTALAG-- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh------HHH---HHHHHHHHhcCCCccccccC--
Confidence 455667777655666654 56666666654 3578888876532 111 22233333322223355666
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. ++++|-.- + | ..-=|-|.|+|||+-
T Consensus 250 --~~sL~el~ali~~-a~l~v~nD---S-G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 --KTTFPELGALIDH-AQLFIGVD---S-A-PAHIAAAVNTPLICL 287 (352)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 6778999999996 99999763 2 2 344477899999984
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=86.04 E-value=76 Score=37.05 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=40.5
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEEC------CCCHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEII-VHGKSGFHID------PYKGDQ 695 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI-~dg~~G~li~------p~d~e~ 695 (784)
+++..++... . +.+.||.- -| -++++||+++|+|+|+-..-+ ....+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h-~-~vg~fvtH---~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSH-R-SIGGFLSH---CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhcc-C-ccCeEEec---CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 5555565552 1 23456643 22 348999999999999964322 23333 3334566553 124566
Q ss_pred HHHHHHHHH
Q 003947 696 ATGILVDFF 704 (784)
Q Consensus 696 lAe~I~~~l 704 (784)
+++++.+.+
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 666666444
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=85.68 E-value=8.2 Score=42.36 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=61.2
Q ss_pred CCC-EEEEEec-ccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 547 SKP-ILFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 547 ~k~-iIl~vGR-L~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ . +...++.+..+ ...+...|
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e--------~---~~~~~i~~~~~-~~~~~l~g 238 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD--------H---PAGNEIEALLP-GELRNLAG 238 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh--------H---HHHHHHHHhCC-cccccCCC
Confidence 344 4455554 34566655 67777766654 2478899987632 1 22223332221 12233556
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+-.++..+++. +|++|..- + | .+-=|-|.|+|+|+-
T Consensus 239 ----~~sL~el~ali~~-a~l~I~~D---S-G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 239 ----ETSLDEAVDLIAL-AKAVVTND---S-G-LMHVAAALNRPLVAL 276 (334)
T ss_pred ----CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 6678899999996 99999763 2 2 344577999999983
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=85.39 E-value=8.9 Score=39.93 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=59.2
Q ss_pred CCCCEEEEEecccCCCChHH--HHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 546 SSKPILFTMARLDRVKNLTG--LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~--LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+++.+++..|.-.+.|.... ..+.+..+.+.+ ++++++|+..+ . +.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~--------~-~~~~~~~~~~~~~-~~~~~~~~- 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE--------Q-EKEIADQIAAGLQ-NPVINLAG- 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH--------H-HHHHHHHHHTTHT-TTTEEETT-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH--------H-HHHHHHHHHHhcc-cceEeecC-
Confidence 34556777776667777654 777777776643 78899987721 0 1222223333222 12577887
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. +|++|.+- + -.+-=|.|.|+|+|+=
T Consensus 171 ---~~~l~e~~ali~~-a~~~I~~D---t--g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ---KTSLRELAALISR-ADLVIGND---T--GPMHLAAALGTPTVAL 208 (247)
T ss_dssp ---TS-HHHHHHHHHT-SSEEEEES---S--HHHHHHHHTT--EEEE
T ss_pred ---CCCHHHHHHHHhc-CCEEEecC---C--hHHHHHHHHhCCEEEE
Confidence 6678899999996 99999873 3 2455588999999985
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.27 E-value=56 Score=34.23 Aligned_cols=139 Identities=9% Similarity=-0.065 Sum_probs=74.9
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccE
Q 003947 564 TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 643 (784)
Q Consensus 564 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadv 643 (784)
....+-+..+.+ -.+++.||..... +++.++++ .++|+|.-. ....++ +.+ +++
T Consensus 35 ~VA~RK~~~Ll~--~gA~VtVVap~i~------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~L 88 (223)
T PRK05562 35 KAAFIKGKTFLK--KGCYVYILSKKFS------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHL 88 (223)
T ss_pred HHHHHHHHHHHh--CCCEEEEEcCCCC------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcE
Confidence 333333444444 3577777776543 23333333 456888751 222233 343 555
Q ss_pred EEeCCCCCCCcH-HHHHHHHcCCcEEEcCccccccc-----cccCceEEEE-CCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 644 FVQPALYEAFGL-TVVEAMTCGLPTFATCNGGPAEI-----IVHGKSGFHI-DPYKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 644 fV~PS~~E~fGl-tvlEAMA~GlPVIaT~~GG~~Ei-----I~dg~~G~li-~p~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
++..+.-+...- ..-+|.+.|.+|.+.+.....++ +..|.--+-| ..+....+|..|.+-++.++.+-+.+.+
T Consensus 89 ViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~ 168 (223)
T PRK05562 89 IVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIE 168 (223)
T ss_pred EEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 554444333333 34566788999998766544444 3333222222 2234557888888888877755455556
Q ss_pred HHHHHHHHHHHh
Q 003947 717 ISQGGLKRIQEK 728 (784)
Q Consensus 717 m~~~a~~~v~~~ 728 (784)
.....|+.+.+.
T Consensus 169 ~l~~~R~~vk~~ 180 (223)
T PRK05562 169 YVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHHhh
Confidence 666667776554
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=81.59 E-value=63 Score=34.81 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=50.5
Q ss_pred hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcccc
Q 003947 563 LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKG 642 (784)
Q Consensus 563 i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aad 642 (784)
+..+++++..+.+. .+.+++++..... .| .+..+++.+.+.-...+. . ..+..++..+++. ++
T Consensus 190 ~~~l~~~l~~l~~~-~g~~v~~i~~~~~---~D------~~~~~~l~~~~~~~~~i~--~----~~~~~e~~~~i~~-~~ 252 (298)
T TIGR03609 190 LLRLLRALDRLQRD-TGAFVLFLPFQQP---QD------LPLARALRDQLLGPAEVL--S----PLDPEELLGLFAS-AR 252 (298)
T ss_pred HHHHHHHHHHHHHh-hCCeEEEEeCCcc---hh------HHHHHHHHHhcCCCcEEE--e----cCCHHHHHHHHhh-CC
Confidence 45666777666553 2456656554321 11 122334444433233332 2 4567899999996 88
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
++|-..++ ..+=|+++|+|+++-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88755432 467799999999974
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=81.32 E-value=2.6 Score=37.87 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=57.1
Q ss_pred EEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhH--HHHHHHccccEEEeCCCCCCCcH---H
Q 003947 582 LVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYEAFGL---T 656 (784)
Q Consensus 582 LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fGl---t 656 (784)
++|||+-.+ ....+++.++++|.. +.++|... .....+ +...+.+ +|++|++..+=+... +
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHH
Confidence 678888432 246788889998863 44544222 333334 8888886 899999887555443 3
Q ss_pred HHHHHHcCCcEEEcCcccccccc
Q 003947 657 VVEAMTCGLPTFATCNGGPAEII 679 (784)
Q Consensus 657 vlEAMA~GlPVIaT~~GG~~EiI 679 (784)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 46788899999999877665543
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=81.31 E-value=4.3 Score=40.32 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=44.1
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
...+|+|++.+-.. +-...+.....++|.+..+|.... .||.+...-.++. |.+ ....+.-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~--~~~-----~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQ--YGM-----NNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCcccccc--HHH-----HHHHHHHhceeeeecch
Confidence 44689999865432 212222223456999999998643 3444432222221 211 12235567999999997
Q ss_pred HhHhhcccc
Q 003947 460 QEIAGSKDT 468 (784)
Q Consensus 460 ~~~~~~~~~ 468 (784)
.-.+..-+.
T Consensus 129 ~nr~sFL~~ 137 (168)
T PF12038_consen 129 FNRDSFLDG 137 (168)
T ss_pred hhHHHHHHH
Confidence 655533333
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth [] | Back alignment and domain information |
|---|
Probab=80.66 E-value=23 Score=38.05 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
+.++.++.=.+.|+++.+++++++.+. .+++-..|.|.. .. =....+.+..|++ ++++++..
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~---------~h-l~~~~l~~~~G~~--~~~Vpy~G--- 140 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS---------DH-LAAALLAKAAGIK--FTHVPYDG--- 140 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH---------HH-HHHHHHHHHHT-----EEEE-SS---
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch---------HH-HHHHHHHHHhCCc--eEEEEeCC---
Confidence 566777776789999999999876533 344444443321 11 1234456677764 45555322
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC--cEEEc---Cccc-----------cccccccCceEEEECCCC
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL--PTFAT---CNGG-----------PAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl--PVIaT---~~GG-----------~~EiI~dg~~G~li~p~d 692 (784)
..+.+..++....|+.+.. .-......-.|. |+.++ +... ..++....-.|++.+++-
T Consensus 141 ~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~gt 214 (274)
T PF03401_consen 141 GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKGT 214 (274)
T ss_dssp HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETTS
T ss_pred ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCCC
Confidence 2456677777777776653 123344444443 22221 1111 223333345689999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+++..+++.+.+++..+||+..+.+.+.+.
T Consensus 215 p~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 215 PDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp -HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 999999999999999999998777666554
|
Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=80.57 E-value=18 Score=42.79 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=122.7
Q ss_pred hhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-
Q 003947 537 KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN- 615 (784)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~- 615 (784)
|..+|+ +.+..++...-.| .|=-...++.+.++.+.-|+..|++.---.- -...++..+++.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc----------chHHHHHHHHHhCCCc
Confidence 345676 5555555544444 3444567777777777678888877653211 115678889999985
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEECC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII-----VHGKSGFHIDP 690 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI-----~dg~~G~li~p 690 (784)
++|.|... ...+|=.+-.. -+||++-+...-|. .|-.|.+.+|+|+|.-...-.+.-| ..-..|-+|.
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia- 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA- 888 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-
Confidence 68888863 33344444444 37888877766653 3567889999999975332222211 1111333443
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHh
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQ--EKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKN 760 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~--~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~ 760 (784)
.+-++..+.-. .|..|.+..+++...-+..-. --|+-..++..++++|.. -|+..-+.+..+.+
T Consensus 889 k~~eEY~~iaV----~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~~p~h~ 954 (966)
T KOG4626|consen 889 KNREEYVQIAV----RLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGEVPDHR 954 (966)
T ss_pred hhHHHHHHHHH----HhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCCCCchH
Confidence 35555555443 456888888887766554332 238899999999999976 78876665555544
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=80.47 E-value=32 Score=39.87 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=51.2
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEEC
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVH-GKSGFHID 689 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~d-g~~G~li~ 689 (784)
++...+ +++..++.. ..++ ||.= -| -++++||+++|+|+|+. +.......+.+ -..|..++
T Consensus 335 g~~v~~----W~PQ~~iL~----H~~v~~FvTH---~G-~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 402 (451)
T PLN03004 335 GMVVKS----WAPQVPVLN----HKAVGGFVTH---CG-WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN 402 (451)
T ss_pred cEEEEe----eCCHHHHhC----CCccceEecc---Cc-chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec
Confidence 455555 556656554 3555 5532 22 35899999999999996 34444555543 35787775
Q ss_pred CC-----CHHHHHHHHHHHHHHhcCCHHHHH
Q 003947 690 PY-----KGDQATGILVDFFEKCKVDPGHWD 715 (784)
Q Consensus 690 p~-----d~e~lAe~I~~~l~~ll~dp~~~~ 715 (784)
.. +.+++++++.++ +.++.+++
T Consensus 403 ~~~~~~~~~e~l~~av~~v----m~~~~~r~ 429 (451)
T PLN03004 403 ESETGFVSSTEVEKRVQEI----IGECPVRE 429 (451)
T ss_pred CCcCCccCHHHHHHHHHHH----hcCHHHHH
Confidence 32 567777777654 45665443
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=80.21 E-value=73 Score=37.15 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=43.4
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccc-ccccCceEEEECC---------CC
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAE-IIVHGKSGFHIDP---------YK 692 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~E-iI~dg~~G~li~p---------~d 692 (784)
+++..++...= +.++||.= -|++ +++||+++|+|+|+-...+ ... +++.-..|+.++. -+
T Consensus 347 w~PQ~~iL~h~--~vg~fvtH---~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~ 420 (475)
T PLN02167 347 WAPQVEILAHK--AIGGFVSH---CGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVK 420 (475)
T ss_pred cCCHHHHhcCc--ccCeEEee---CCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCccc
Confidence 66666655421 24567753 3433 8999999999999963332 232 2334446776642 25
Q ss_pred HHHHHHHHHHHH
Q 003947 693 GDQATGILVDFF 704 (784)
Q Consensus 693 ~e~lAe~I~~~l 704 (784)
.+++++++.+++
T Consensus 421 ~~~l~~av~~~m 432 (475)
T PLN02167 421 ADEIAGAVRSLM 432 (475)
T ss_pred HHHHHHHHHHHh
Confidence 667777776544
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=80.05 E-value=15 Score=40.47 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=61.8
Q ss_pred CCEEEEEecccCCCCh--HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 548 KPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi--~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+++..|.-.+.|.. +...+.+..+.+ .+..++++|+..+ +|. +...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~------~e~---~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK------DEL---AMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH------HHH---HHHHHHHhhCCCCcccccCC---
Confidence 3455666654455554 455566666544 3578899986421 111 12223333333222344666
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. ++++|-.- + -.+-=|-|.|+|+|+=
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~D---S--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGVD---S--VPMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C--HHHHHHHHcCCCEEEE
Confidence 6778999999996 99999763 2 2445588999999984
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 784 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 7e-34 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 2e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 2e-05 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-04 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 1e-04 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 6e-04 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 784 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 0.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-162 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 1e-46 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 4e-28 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 3e-26 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 2e-25 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 3e-22 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 3e-18 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 2e-17 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 6e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 3e-13 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 9e-08 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 7e-07 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 7e-05 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 2e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 4e-04 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 941 bits (2433), Expect = 0.0
Identities = 598/796 (75%), Positives = 673/796 (84%), Gaps = 13/796 (1%)
Query: 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDA--ESNGAAIAD-----VL 49
++ ETL L LLS +E G GI ++ QI++ +A E + +L
Sbjct: 14 QRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLL 73
Query: 50 NATQEAAVSSPWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGN 109
+TQEA V PWVALA+R PGVW Y+RVN+ + VEE+ +++L FKEE+VDG NGN
Sbjct: 74 KSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGV-KNGN 132
Query: 110 FAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHMGK 168
F E+DFEPF A +P PTL IG+G++FLNRH+SAKLF+DKES+ LL+FLR+HSH GK
Sbjct: 133 FTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGK 192
Query: 169 NMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228
N+ML+EKIQ+L TLQ +LR AE+YL+ L +T Y EFE KF+EIGLERGWGDNAE VL M
Sbjct: 193 NLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDM 252
Query: 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQV 288
I+LLLDLL+AP+ TLETFLG++P VFNVVI +PHGYFAQDNVLGYPDTGGQVVYILDQV
Sbjct: 253 IRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQV 312
Query: 289 RALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTE 348
RALE EML RIKQQGL+I PRILI+TRLLPDAVGTTCG+R+E+VY ++Y DILRVPFRTE
Sbjct: 313 RALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTE 372
Query: 349 EGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408
+GIVRKWISRFEVWPYLET+TED A E+ +EL KPDLIIGNYSDGN+VASLLAHKL VT
Sbjct: 373 KGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT 432
Query: 409 QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468
QCTIAHALE TKYPDSDI WKKLDDKYHFSCQFTAD+FAMN TDFIITSTFQEIAGSK+T
Sbjct: 433 QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKET 492
Query: 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528
VGQYESHTAF+LPGLYRVV+GID FDPKFNIVSPGADM+IYFPY EEKRRL FHSEIEE
Sbjct: 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE 552
Query: 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD 588
LLYS VENKEHLCVLKD KPILFTMARLDRVKNL+GLVEWYGKN +LREL NLVVVGGD
Sbjct: 553 LLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGD 612
Query: 589 RRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648
RRKESKD EE+AEMKKMY LI+ YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPA
Sbjct: 613 RRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPA 672
Query: 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708
LYEAFGLTVVEAMTCGLPTFATC GGPAEIIVHGKSGFHIDPY GDQA L DFF KCK
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732
Query: 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYS 768
DP HWDEIS+GGL+RI+EKYTW+IYS+RLL L+GVYGFWKH+S LD E RYLEMFY+
Sbjct: 733 EDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYA 792
Query: 769 LMYRKQVQTVPLAVDE 784
L YR Q VPLA D+
Sbjct: 793 LKYRPLAQAVPLAQDD 808
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-162
Identities = 132/504 (26%), Positives = 216/504 (42%), Gaps = 59/504 (11%)
Query: 248 LGKIPRVFNVVIFTPHGYFAQDNVLG--YPDTGGQVVYILDQVRALENEMLLRIKQQGLD 305
+ ++ R+ +V P G F + +PD GGQ+VY+ + AL + G+
Sbjct: 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALA--------EMGVQ 52
Query: 306 ITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYL 365
+ IITR + D ++ T I+R+PF ++ ++ + E+WPYL
Sbjct: 53 VD----IITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYL 103
Query: 366 ETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSD 425
+ + +E P ++ +Y DG + LL + + H+L K +
Sbjct: 104 HEYVNKII-NFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 426 I---NWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPG 482
+ N+K++D+++ F + A+ M+ D II ST QE G QY
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG------QYS-------HD 209
Query: 483 LYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCV 542
LYR ++ D KF+++ PG + ++ +K + K +E L S
Sbjct: 210 LYRGAVNVED-DDKFSVIPPGVNTRVFDGEYGDKIKAK-ITKYLERDLGSE--------- 258
Query: 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDL-----E 597
P + +RLD+ KN GLVE Y +N +L++ NLV+ +D E
Sbjct: 259 --RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316
Query: 598 EQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 657
E+ + K+ LID G+ + Y Y+ F + YE FGL
Sbjct: 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELA-GCYAYLASKGSVFALTSFYEPFGLAP 375
Query: 658 VEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEI 717
VEAM GLP T NGGPAEI+ GK G +DP + L+ FE W
Sbjct: 376 VEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE----SEETWSAY 431
Query: 718 SQGGLKRIQEKYTWKIYSERLLNL 741
+ G +R++E+YTW+ + L +
Sbjct: 432 QEKGKQRVEERYTWQETARGYLEV 455
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 1e-46
Identities = 83/470 (17%), Positives = 152/470 (32%), Gaps = 84/470 (17%)
Query: 272 LGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEK 331
G D+GG VYIL L +QG+++ I TR A + G+ V
Sbjct: 36 PGTGDSGGMNVYILSTATEL--------AKQGIEVD----IYTR----ATRPSQGEIVRV 79
Query: 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNY 391
++ + EG+ S+ E+ L FT + + + DLI +Y
Sbjct: 80 AENL---RVINIAAGPYEGL-----SKEELPTQLAAFTGGML-SFTRREKVTYDLIHSHY 130
Query: 392 SDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRT 451
V LL + AH L K ++ D + + ++
Sbjct: 131 WLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-----YRDDSDTPESEARRICEQQLVDNA 185
Query: 452 DFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFP 511
D + +T +E+ D + Y DA + ++VSPGAD+ +Y P
Sbjct: 186 DVLAVNTQEEMQ---DLMHHY------------------DADPDRISVVSPGADVELYSP 224
Query: 512 YMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571
+ ++ L + ++ + RL K L++
Sbjct: 225 GNDRATE----------------RSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNG 631
NL V+ + + + + + R++ +
Sbjct: 267 ALFDRDPDRNLRVIICGGPSGPNATPDTYR-----HMAEELGVEKRIRFLDPRPPSELV- 320
Query: 632 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPY 691
+YR D P+ E+FGL +EA G P A GG + G++G +D
Sbjct: 321 AVYR-AAD---IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDG- 375
Query: 692 KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
D D + + ++ ++W + +L +L
Sbjct: 376 -HSPHA--WADALATLLDDDETRIRMGEDAVEHA-RTFSWAATAAQLSSL 421
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-28
Identities = 80/474 (16%), Positives = 158/474 (33%), Gaps = 121/474 (25%)
Query: 274 YPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333
YP GG V + + L ++G +I IT LP + + +Y
Sbjct: 23 YPSVGGSGVVGTELGKQL--------AERGHEIH----FITSGLPFRLN----KVYPNIY 66
Query: 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSD 393
V S F+ PY +A E+ Q D++ +Y+
Sbjct: 67 ------FHEVTVNQ--------YSVFQYPPYDLALASKMA-EVAQRE--NLDILHVHYAI 109
Query: 394 GNIVASLLAHKLDVTQCTI---AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNR 450
+ + + LA ++ + I H ++T + L++ F +
Sbjct: 110 PHAICAYLAKQMIGERIKIVTTLHGTDITVLG----SDPSLNNLIRFGI---------EQ 156
Query: 451 TDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF 510
+D + V L + + + V D +YF
Sbjct: 157 SDVVTA------------VSHS----------LINETHELVKPNKDIQTVYNFIDERVYF 194
Query: 511 PYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWY 570
+ + ++ SE S+ IL ++ +VK + +V+ +
Sbjct: 195 KRDMTQLKKEYGISE---------------------SEKILIHISNFRKVKRVQDVVQAF 233
Query: 571 GKNAKLRELVN--LVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627
AK+ V+ L++VG G + + + + + ++ Q N
Sbjct: 234 ---AKIVTEVDAKLLLVGDGPEFCT---ILQLVK---------NLHIEDRVLFLGKQDNV 278
Query: 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFH 687
EL + D + + E+FGL ++EAM CG+P T GG E+I HG +G+
Sbjct: 279 A---ELLA-MSD---LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYL 331
Query: 688 IDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
+ GD + D + D + + + + E++ + + +
Sbjct: 332 CEV--GDTTG--VADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETI 381
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
D KPI+ ++R D K + ++E Y K + V L++VG D E +K
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMA---HDDPEGWIYFEK 284
Query: 605 -MYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC 663
+ + + Y + I V R D +Q ++ E FGLTV EAM
Sbjct: 285 TLRKIGEDYDVKVLTNLIGVHAREVN--AFQR-ASD---VILQMSIREGFGLTVTEAMWK 338
Query: 664 GLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723
G P GG IV G++GF + V+ P E+ +
Sbjct: 339 GKPVIGRAVGGIKFQIVDGETGFLVRDANE------AVEVVLYLLKHPEVSKEMGAKAKE 392
Query: 724 RIQEKYTWKIYSERLLNL 741
R+++ + + ER L++
Sbjct: 393 RVRKNFIITKHMERYLDI 410
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-25
Identities = 67/473 (14%), Positives = 122/473 (25%), Gaps = 120/473 (25%)
Query: 274 YPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITR----LLPDAVGTTCGQRV 329
Y GG + + +G + + T+ P A
Sbjct: 10 YFPFGGLQRDFMRIASTV--------AARGHHVR----VYTQSWEGDCPKAF-------- 49
Query: 330 EKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIG 389
++++VP + + V + + D ++G
Sbjct: 50 ---------ELIQVPVK-----------SHTNHGRNAEYYAWVQNHLKEH---PADRVVG 86
Query: 390 NYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN 449
+ A A + K +L +Y F F
Sbjct: 87 FNKMPGLDVYFAADVCY------AEKVAQEKGF-----LYRLTSRYRHYAAFERATFEQG 135
Query: 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY 509
++ ++ T ++IA + + +F I+ PG
Sbjct: 136 KSTKLMMLTDKQIA---------DFQKHYQTE------------PERFQILPPGIYPDRK 174
Query: 510 FPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE- 568
+ R + + +L + K + +E
Sbjct: 175 YSEQIPNSR-----EIYRQKNGIK------------EQQNLLLQVGSDFGRKGVDRSIEA 217
Query: 569 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628
LR L VVG D+ ++ E AE + + S + N V
Sbjct: 218 LASLPESLRHNTLLFVVGQDKPRK---FEALAE---------KLGVRSNVHFFSGR-NDV 264
Query: 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688
EL D + PA EA G+ ++EA+T GLP T G A I G I
Sbjct: 265 S--ELMA-AAD---LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI 318
Query: 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
Q L + K ++ + E+ ++
Sbjct: 319 -AEPFSQEQ--LNEVLRKALTQSPLRMAWAENARHYA-DTQDLYSLPEKAADI 367
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 99.1 bits (246), Expect = 3e-22
Identities = 47/380 (12%), Positives = 103/380 (27%), Gaps = 35/380 (9%)
Query: 388 IGNYSDGNIVASLLAHKLDVTQCTIA-----HALELTKYPDSDINWKKLDDKYHFSCQFT 442
G + ++ +V I + ++ + ++ F
Sbjct: 16 YGRVM--RAIVPRISKAHEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGL 73
Query: 443 ADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVS- 501
++ +++ D ++ + G+ SH LY + + + + I S
Sbjct: 74 SEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTK--IVLYVDLVSKNIRENLWWIFSH 131
Query: 502 PGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH------LCVLKDSSKPILFTMA 555
P + + ++ V+ K + + + + + M
Sbjct: 132 PKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMN 191
Query: 556 RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQA-EMKKMYGLIDTYKL 614
R K L V + + + + DL A G+ + +
Sbjct: 192 RNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTH 251
Query: 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG 674
+ + + R +Y CD V + E FGL E G P + GG
Sbjct: 252 LNKIMINRTVLTDERVDMMYN-ACD---VIVNCSSGEGFGLCSAEGAVLGKPLIISAVGG 307
Query: 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHW-------------DEISQGG 721
+ G + I P + +D E +
Sbjct: 308 ADD-YFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRV 366
Query: 722 LKRIQEKYTWKIYSERLLNL 741
++ K TW S +++
Sbjct: 367 QDFVKTKPTWDDISSDIIDF 386
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 3e-18
Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMY 606
++ R+ K + +E + KL++ L +VG + ++ +
Sbjct: 23 GDFWLSVNRIYPEKRIELQLEVF---KKLQD-EKLYIVGWFSKGDHAERYARKIMKI--- 75
Query: 607 GLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 666
+++ S +LY C + A E FGLT +EAM G P
Sbjct: 76 -------APDNVKFLGSVSEEELI-DLYS-RCK---GLLCTAKDEDFGLTPIEAMASGKP 123
Query: 667 TFATCNGGPAEIIVHGKSGFHIDP 690
A GG E +++ K+G+ ++
Sbjct: 124 VIAVNEGGFKETVINEKTGYLVNA 147
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-17
Identities = 69/461 (14%), Positives = 137/461 (29%), Gaps = 117/461 (25%)
Query: 308 PRILIITRLLPDAVG-----------TTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWI 356
+ L++T P +G T + + V+ + + + +
Sbjct: 5 RKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIV-VFASTQNAEEAHAYDKTLDYE---V 60
Query: 357 SRFEVWPYLETF-TEDVATEIIQELQCKPDLI-IGNYSDGNIVASLLAHKLDVTQCTIAH 414
R+ L T T EII+E + D + G + ++A H
Sbjct: 61 IRWPRSVMLPTPTTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTH 118
Query: 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYES 474
E+ + D + + QY
Sbjct: 119 GHEVGWSMLPGSRQ--------------SLRKIGTEVDVLTY------------ISQYT- 151
Query: 475 HTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534
R P F + G D+ + P E + + ++L ++
Sbjct: 152 ---------LRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS-----ATRKKLGFTD- 196
Query: 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE-WYGKNAKLREL---VNLVVVG-GDR 589
+ P++ +RL K L++ ++ L++VG G
Sbjct: 197 ------------TTPVIACNSRLVPRKGQDSLIKAM----PQVIAARPDAQLLIVGSGRY 240
Query: 590 RKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQP 647
L A ++ +++ R+ ++ + D F P
Sbjct: 241 EST---LRRLAT-----------DVSQNVKFLG----RLEYQDMINTLAAAD---IFAMP 279
Query: 648 AL-------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGIL 700
A E G+ +EA CG+P A +GG E + +G ++ D L
Sbjct: 280 ARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEG--SDVDK--L 334
Query: 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
+ + DP + G ++ +++W+I ERL N+
Sbjct: 335 SELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNI 375
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 6e-15
Identities = 27/190 (14%), Positives = 61/190 (32%), Gaps = 37/190 (19%)
Query: 549 PILFTMARLDRVKNLTGLVEWYGKNAKLREL--VNLVVVG-GDRRKESKDLEEQAEMKKM 605
+ + R KN + L++ A + + L++ G G K+ ++ A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAV---ALSKYKQDIVLLLKGKGPDEKK---IKLLAQ---- 52
Query: 606 YGLIDTYKLNGQFRWISSQMNRVRNGELYRYI--CDTKGAFVQPALYEAFGLTVVEAMTC 663
+ +F +++S EL + C +V A E+ + +EA++
Sbjct: 53 -----KLGVKAEFGFVNSN-------ELLEILKTCT---LYVHAANVESEAIACLEAISV 97
Query: 664 GLPT-FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722
G+ A + +P + L + + + +
Sbjct: 98 GIVPVIANSPLSATRQFALDE-RSLFEP--NNAKD--LSAKIDWWLENKLERERMQNEYA 152
Query: 723 KRIQEKYTWK 732
K YT +
Sbjct: 153 KSALN-YTLE 161
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 76.0 bits (186), Expect = 3e-14
Identities = 86/653 (13%), Positives = 186/653 (28%), Gaps = 182/653 (27%)
Query: 3 QQFIETLSKSLTLLSSIERLGCGIYKRQQ---ILSLVDAESNGAAIADVLNATQEAAVSS 59
F + + ++ + I +++ I+ DA S + L + QE V
Sbjct: 23 SVFEDAFVDNFDC-KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 60 PWVALALRTSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPF 119
+V LR + + + + ++ Y E D R N N F
Sbjct: 82 -FVEEVLRINYK-FLMSPIKTEQRQPSMMTR-MY----IEQRD-RLYNDNQVFAKYNVS- 132
Query: 120 RALPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRVHSHM---GKNMMLNEKI 176
R P+ L L + + + + + + GK + +
Sbjct: 133 RLQPYLKLRQ---------------ALLELRPA-----KNVLIDG-VLGSGKTWVALDVC 171
Query: 177 QDLGTLQSSLRMAEK--YLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLD 234
+M K +L++ ++ E VL M+Q LL
Sbjct: 172 LSYKVQC---KMDFKIFWLNL---------------------KNCNSPETVLEMLQKLLY 207
Query: 235 LLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENE 294
+ P ++ I + + Y + + +L V+ N
Sbjct: 208 QID-PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP---YENC----LLVLLNVQ---NA 256
Query: 295 MLLRIKQQGLDITPRILIITR--LLPDAVGTTCGQRVE------------------KVYG 334
+++ +IL+ TR + D + + K
Sbjct: 257 KAWN----AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 335 TKYSDILRVPFRTEEGI----------VRKWISRFEVWPYLETFTEDVATEIIQE-LQC- 382
+ D+ P +R ++ ++ W ++ D T II+ L
Sbjct: 313 CRPQDL---PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC---DKLTTIIESSLNVL 366
Query: 383 KPDLIIGNY-------SDGNI-------------------------VASLLAHKLDVTQC 410
+P + +I SL+ + +
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 411 TIAHAL--ELTKYPDSDINW-KKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKD 467
+I ++ EL +++ + + D Y+ F +D D + I
Sbjct: 427 SI-PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF---YSHIGHHLK 482
Query: 468 TVGQYESHTAFSLPGLY--------RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEK--- 516
+ E T F ++ ++ + A++ +I++ + Y PY+ +
Sbjct: 483 NIEHPERMTLF--RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540
Query: 517 -----RRLKHFHSEIEELLYSPVENKEHLCV----LKDSSKPILFTMAR-LDR 559
+ F +IEE L ++ + L + I + + R
Sbjct: 541 YERLVNAILDFLPKIEENLI----CSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 8e-09
Identities = 84/595 (14%), Positives = 177/595 (29%), Gaps = 181/595 (30%)
Query: 244 LETFLGKIPRVFNV--VIFTPHGYFAQ---DNVLGYPDTGGQVVYILDQVRALENEMLLR 298
L F F+ V P ++ D+++ D + + + + + EM+ +
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 299 IKQQGLD-----ITPRILIITRLLPDAVGTTCGQRVEKVYG-----TKYSDILRVPFRTE 348
++ L + I R P + ++ +++Y KY+ V R +
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYN----VS-RLQ 135
Query: 349 EGI-VRKWISRFEVWPYL----------ETFTEDVATEIIQELQCKPD-----LIIGNY- 391
+ +R+ + + DV ++QCK D L + N
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS--YKVQCKMDFKIFWLNLKNCN 193
Query: 392 SDGNIVASL--LAHKLDVTQCTIAHALELTKYPDSDINWKK---------------LDDK 434
S ++ L L +++D + + K I + L +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 435 YHFSCQFTADLFAMN-RTDFIITSTFQEIAGSKDTV-GQYESHTAFSLPGLYRVVNGIDA 492
+ + F ++ + ++T+ F+++ D + +H + +
Sbjct: 254 QNAK---AWNAFNLSCKI--LLTTRFKQVT---DFLSAATTTH--------ISLDHHSMT 297
Query: 493 FDPKFNIVSPGADMTIYFPYMEEKRRL--KHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550
P +E + L K+ ++L P E VL + P
Sbjct: 298 LTP------------------DEVKSLLLKYLDCRPQDL---PRE------VLTTN--PR 328
Query: 551 LFTM-ARLDRVKNLTGLVEW-YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGL 608
++ A R T W K+ +L ++ + S ++ E AE +KM+
Sbjct: 329 RLSIIAESIRDGLAT----WDNWKHVNCDKLTTII-------ESSLNVLEPAEYRKMF-- 375
Query: 609 IDTYKLNGQFR---WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 665
+L F I + + L D + V + L
Sbjct: 376 ---DRL-SVFPPSAHIPTIL-------LSLIWFDVIK-------------SDVMVVVNKL 411
Query: 666 PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPG-HWDEISQGGLKR 724
++ P E I ++ K + + H +
Sbjct: 412 HKYSLVEKQPKE----STISIP----------SIYLELKVKLENEYALH---------RS 448
Query: 725 IQEKY----TWKIYSERLLNLSGVYGFWK---HLSKLDCREKNRYLEMFYSLMYR 772
I + Y T+ L Y + HL ++ E+ M + L +R
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQ-YFYSHIGHHLKNIEHPERMTLFRMVF-LDFR 501
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 62/431 (14%), Positives = 128/431 (29%), Gaps = 129/431 (29%)
Query: 423 DSDINWKKLDDKY-----HFSCQFTADLFAMNRTDF---IITST-FQEIAGSKDTVGQYE 473
D + + +Y F F + + D I++ I SKD V
Sbjct: 8 DFETG--EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG-- 63
Query: 474 SHTAFSL------PGLYRVVNGIDAFDPKFNIVSPGADMT-----IYFPYMEEKRRL--- 519
+ F + + V + + KF ++SP + Y+E++ RL
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 520 -----KHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMA------------RLDRVK- 561
K+ S ++ L + ++ L L+ + ++ + +V+
Sbjct: 123 NQVFAKYNVSRLQPYL----KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178
Query: 562 NLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621
+ + W +NL + LE ++K+ Y+++ +
Sbjct: 179 KMDFKIFW----------LNL----KNCNSPETVLEM---LQKLL-----YQIDPNWTSR 216
Query: 622 SSQMNRVR------NGELYRYICDTKGAF-------VQ-PALYEAFGL---TVVEAMTCG 664
S + ++ EL R + VQ + AF L ++
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF---------EKCKVDPGHWD 715
+ F + + H D+ +L+ + E +P
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTNPRR-- 329
Query: 716 EISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLM----Y 771
+S TW WKH ++C + +E +++ Y
Sbjct: 330 -LSIIAESIRDGLATWD--------------NWKH---VNCDKLTTIIESSLNVLEPAEY 371
Query: 772 RKQVQTVPLAV 782
RK L+V
Sbjct: 372 RKMFDR--LSV 380
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 3e-13
Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 46/205 (22%)
Query: 549 PILFTMARLDR-VKNLTGLVE-WYGKNAKLREL---VNLVVVG-GDRRKESKDLEEQAEM 602
+ + R D K + L+ KL V +++VG GD + L EQA
Sbjct: 209 RTVLFLGRYDEPRKGMAVLLAAL----PKLVARFPDVEILIVGRGDEDE----LREQAG- 259
Query: 603 KKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTVVEAM 661
L G R++ Q++ R D + P L E+FG+ +VEAM
Sbjct: 260 ----------DLAGHLRFLG-QVDDATKASAMR-SAD---VYCAPHLGGESFGIVLVEAM 304
Query: 662 TCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD-----QATGILVDFFEKCKVDPGHWDE 716
G A+ ++ G +G + D A +++ D
Sbjct: 305 AAGTAVVASDLDAFRRVLADGDAGRLVPV--DDADGMAAALIGILE-------DDQLRAG 355
Query: 717 ISQGGLKRIQEKYTWKIYSERLLNL 741
+R+ +Y W + S +++ +
Sbjct: 356 YVARASERV-HRYDWSVVSAQIMRV 379
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 9e-08
Identities = 18/240 (7%), Positives = 61/240 (25%), Gaps = 34/240 (14%)
Query: 502 PGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE--HLCVLKDSSKPILFTMARLDR 559
G + ++ + ++ ++ +E + P N + K + I+ R
Sbjct: 193 RGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKEKIILVYGRPSV 252
Query: 560 VKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615
+N L+ + + + ++ VG + + G +
Sbjct: 253 KRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIALGKGIHLNS---LGKLTLEDYA 309
Query: 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP 675
+L + + + +E GL
Sbjct: 310 ----------------DLLK-RSS---IGISLMISPHPSYPPLEMAHFGLRVITN-KYEN 348
Query: 676 AEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735
++ + ++ + + + + + + D + + + +S
Sbjct: 349 KDLSNWHSNIVSLEQLNPEN----IAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFS 404
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 7e-07
Identities = 28/202 (13%), Positives = 44/202 (21%), Gaps = 34/202 (16%)
Query: 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 604
+ + L M R+ K LV+ G E +E
Sbjct: 159 VAKEDFLLFMGRVSPHKGALEAAA-----FAHACGRRLVLAGPAWEPEY--FDEITRR-- 209
Query: 605 MYGLIDTYKLNGQFRWI----SSQMNRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVE 659
I + + + + E V E
Sbjct: 210 ---------YGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSE 260
Query: 660 AMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQ 719
A G P T NG AEI+ T D + DE+ +
Sbjct: 261 AAVSGTPVVGTGNGCLAEIVPSV-------GEVVGYGTDFAPDEARRTLAGLPASDEVRR 313
Query: 720 GGLKRIQEKYTWKIYSERLLNL 741
+ +ER +
Sbjct: 314 ----AAVRLWGHVTIAERYVEQ 331
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 7e-05
Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 9/136 (6%)
Query: 558 DRVKNLTGLVEWYGKNAKLRELV--NLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615
D+V ++ +L +V N+V D L + +++ D K+
Sbjct: 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLI-----LNKIRQVQLFNSPSDRVKMI 495
Query: 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP 675
++++ N + + ++ V P+ YE +G T E G+P+ T G
Sbjct: 496 FHPEFLNAN-NPILGLDYDEFVRGCHL-GVFPSYYEPWGYTPAECTVMGVPSITTNVSGF 553
Query: 676 AEIIVHGKSGFHIDPY 691
+ Y
Sbjct: 554 GSYMEDLIETNQAKDY 569
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 2e-04
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 14/44 (31%)
Query: 515 EKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLD 558
EK+ LK + ++ LY+ DS+ P L A ++
Sbjct: 18 EKQALKKLQASLK--LYAD-----------DSA-PALAIKATME 47
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 40.7 bits (94), Expect = 4e-04
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 8/30 (26%)
Query: 174 EKIQDLGTLQSSLRMAEKYLSMLAPDTSYA 203
EK Q L LQ+SL++ A D++ A
Sbjct: 18 EK-QALKKLQASLKL-------YADDSAPA 39
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 784 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.93 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.89 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.88 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.82 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.81 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.78 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.77 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.74 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.73 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.72 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.71 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.69 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.69 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.64 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.6 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.48 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.46 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.44 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.43 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.43 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.4 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.39 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.31 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.27 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.26 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.24 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.94 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.9 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.82 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.78 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.68 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 97.52 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.45 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.15 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 94.29 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 91.45 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 88.02 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 83.13 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 80.75 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-176 Score=1576.98 Aligned_cols=783 Identities=77% Similarity=1.251 Sum_probs=744.8
Q ss_pred ChhhHHHHHHHH----HHHHHHHHhcCCCccchhhHHHHHHhc-cC------CCcHHHHHhhcceeeecCCcEEEEEecC
Q 003947 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDAE-SN------GAAIADVLNATQEAAVSSPWVALALRTS 69 (784)
Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (784)
|+|+|+++|++| ++||++|+++||++|++|||+++|+++ +. +|+||++|++||||||.|||||||||||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 93 (816)
T 3s28_A 14 QRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPR 93 (816)
T ss_dssp -------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTTSCGGGCCCSTHHHHHHTEEEEEECSSEEEEEEEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhhhcccccCcHHHHHHhhhheeecCCeEEEEEcCC
Confidence 689999999999 999999999999999999999999999 32 8999999999999999999999999999
Q ss_pred CceEEEEEEeeCcceeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcccC
Q 003947 70 PGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFN 148 (784)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (784)
||+|||||||++||+||+|||+|||+|||+|||++ ++++++||+||+|||+ ||+|++|+||||||+|||||||||||+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (816)
T 3s28_A 94 PGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGV-KNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFH 172 (816)
T ss_dssp TTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSS-CCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHHHHHHHTTT
T ss_pred CcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCC-CCCCCceEEeccccccCCCCCCCcccccCcHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999 8999999999999999 999999999999999999999999999
Q ss_pred CccchHHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHHHH
Q 003947 149 DKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGM 228 (784)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 228 (784)
|++++++||+||+.|+|+|++|||||||+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (816)
T 3s28_A 173 DKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDM 252 (816)
T ss_dssp CHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCSBHHHHHHH
T ss_pred ChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCccc
Q 003947 229 IQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITP 308 (784)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~ 308 (784)
|++|+++|++|||++||+|++|+||+|||+|||+||+|+|.+++|+||||||++||+|||||||++|+++|+++||+|+|
T Consensus 253 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~ 332 (816)
T 3s28_A 253 IRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKP 332 (816)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEE
Q 003947 309 RILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLII 388 (784)
Q Consensus 309 ~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh 388 (784)
+|+|+|+.+++..|+.|.++.+.+.+++|++|+|+|+++.+|++++|++++.+|+|+..|...+...+.....++|||||
T Consensus 333 ~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIH 412 (816)
T 3s28_A 333 RILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLII 412 (816)
T ss_dssp EEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEE
T ss_pred eeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 99999999999999999999999999999999999999988889999999999999999998888888877677999999
Q ss_pred EcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccc
Q 003947 389 GNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468 (784)
Q Consensus 389 ~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (784)
+|++.+++++.++++.+|+|+|+|+|++...++..++..|..+...|++++++.+|+.+++.||.|||+|+++++.+.+.
T Consensus 413 sH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~ 492 (816)
T 3s28_A 413 GNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKET 492 (816)
T ss_dssp EEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSS
T ss_pred eCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999888888888898889999999999999999999999999999999999999
Q ss_pred ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCC
Q 003947 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSK 548 (784)
Q Consensus 469 vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k 548 (784)
+++|.++.+|++|++|++++|++++++|+.|||||+|.+.|.|......++...++.++..++++.+.++.+|++.++++
T Consensus 493 ~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~ 572 (816)
T 3s28_A 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK 572 (816)
T ss_dssp CCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS
T ss_pred HHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC
Confidence 99999999999999999999999999999999999999999998877777888889999999999999999999888899
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
++|+++||+++.||++.+++|++++.+.+++++|+|+|+|++..+.+.++.++.+.++++++++++.++|+|+|++++.+
T Consensus 573 ~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v 652 (816)
T 3s28_A 573 PILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRV 652 (816)
T ss_dssp CEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHH
T ss_pred eEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccC
Confidence 99999999999999999999999998877899999999998656678888889999999999999999999999888888
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhc
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll 708 (784)
+.+++++++++++|+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|+|++++|++|.+++++++
T Consensus 653 ~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 653 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 88999999997689999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhccccccccCcccCC
Q 003947 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784 (784)
Q Consensus 709 ~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 784 (784)
.||+.+++|+++|++++.++|||+.++++++++|+.||||+++++++|++++||+||||+|+|||||++||+++||
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~wk~vs~~~r~~~~ryle~~~~l~~~~~~~~~~~~~~~ 808 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHTHHHHHHHSCCCCC-
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhHhhhcchhhhHHHHHHHHHHHHHhhhhHHhcCCCccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=423.28 Aligned_cols=434 Identities=27% Similarity=0.453 Sum_probs=314.5
Q ss_pred CCcceEEEEEccCccccccC--ccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcc
Q 003947 251 IPRVFNVVIFTPHGYFAQDN--VLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQR 328 (784)
Q Consensus 251 ~p~~mkI~ivs~h~~~~~~~--~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~ 328 (784)
+.+.|||++++++++|.+.. +.+.|..||.+.++. +|++.|+++||+|+ |+|..........+...
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~ 71 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGE 71 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCS
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhh
Confidence 34568999999998865322 245678899999999 56666799999999 88865332110112222
Q ss_pred eeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCc
Q 003947 329 VEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408 (784)
Q Consensus 329 ~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp 408 (784)
.+......+++++++|..... +..+..+|.++..+...+.+.+.+. ..+|||||+|++..++++.++++..++|
T Consensus 72 ~~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 72 IDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp EEECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred HHhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCc
Confidence 333322357999999875432 1233456666665555555544432 3589999999877777888888889999
Q ss_pred EEEEecCCcccCCC---CCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccccee
Q 003947 409 QCTIAHALELTKYP---DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYR 485 (784)
Q Consensus 409 ~V~t~H~l~~~k~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~ 485 (784)
+|.+.|+....... ........+...+++......++..++.||.||++|...++...+..
T Consensus 146 ~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~---------------- 209 (499)
T 2r60_A 146 FTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHD---------------- 209 (499)
T ss_dssp EEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSG----------------
T ss_pred EEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhh----------------
Confidence 99999997432110 00000011111222222333466789999999999988776322210
Q ss_pred eecC-C-CC-CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhc-----cccCCCCCEEEEEecc
Q 003947 486 VVNG-I-DA-FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC-----VLKDSSKPILFTMARL 557 (784)
Q Consensus 486 ~~~g-i-~~-f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g-----ll~~~~k~iIl~vGRL 557 (784)
..| + +. ...++.|||||+|.+.|.+......+ ...++++| + ++++++|+++||+
T Consensus 210 -~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~---------------~~~r~~~~~~~~~~--~~~~~~i~~vGrl 271 (499)
T 2r60_A 210 -LYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIK---------------AKITKYLERDLGSE--RMELPAIIASSRL 271 (499)
T ss_dssp -GGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHH---------------HHHHHHHHHHSCGG--GTTSCEEEECSCC
T ss_pred -cccccccccCCCCeEEECCCcChhhcCccchhhhH---------------HHHHHHhccccccc--CCCCcEEEEeecC
Confidence 012 2 00 15689999999999988876432111 01234455 4 5678899999999
Q ss_pred cCCCChHHHHHHHHHhHccCCC-eEEEEEeCCCCC----CcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhH
Q 003947 558 DRVKNLTGLVEWYGKNAKLREL-VNLVVVGGDRRK----ESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE 632 (784)
Q Consensus 558 ~~~Kgi~~LieA~~~l~~~~~~-v~LvIVG~g~~~----~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~e 632 (784)
.+.||++.+++|+.++.+..++ +.|+|+|+++.. ...+.++.++.+.++++++++++.++|.|+| .++.++
T Consensus 272 ~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~ 347 (499)
T 2r60_A 272 DQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQE 347 (499)
T ss_dssp CGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHH
T ss_pred ccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHHH
Confidence 9999999999999998765444 589999983220 0001234445678999999999999999999 777889
Q ss_pred HHHHHHccc----cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhc
Q 003947 633 LYRYICDTK----GAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708 (784)
Q Consensus 633 l~~~la~aa----dvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll 708 (784)
+..+|+. + |++|+||.+|+||++++||||||+|||+|+.||..|++.++.+|++++|+|+++++++|.+ ++
T Consensus 348 ~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~----ll 422 (499)
T 2r60_A 348 LAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLK----AF 422 (499)
T ss_dssp HHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHH----HH
T ss_pred HHHHHHh-cCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHH----HH
Confidence 9999995 9 9999999999999999999999999999999999999999999999999999999999974 45
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 709 VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 709 ~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
+|++.+++|+++|++++.++|||+.++++++++|+..
T Consensus 423 ~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 423 ESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7999999999999999988899999999999999853
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=393.20 Aligned_cols=401 Identities=14% Similarity=0.152 Sum_probs=297.5
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC------cC-
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT------CG- 326 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~------~~- 326 (784)
.|||++++++.++ +..||.+.++. +|++.|+++||+|+ |+|...+...... ++
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 4899999988763 36799999999 56666799999999 9997654432110 00
Q ss_pred -cceee-ecCcCCeEEEEccCCCCcccccccccccCChh-hHH-------HHHHHHHHHHHHHc--CCCceEEEEcCCCh
Q 003947 327 -QRVEK-VYGTKYSDILRVPFRTEEGIVRKWISRFEVWP-YLE-------TFTEDVATEIIQEL--QCKPDLIIGNYSDG 394 (784)
Q Consensus 327 -~~~e~-v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~-yl~-------~f~~~~~~~i~~~~--~~~pDIIh~~~~~~ 394 (784)
..... .....|++++++|. .. ..+..++. +.. .|...+.+.+...+ ..+|||||+|++..
T Consensus 62 ~~~~~~~~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~ 133 (439)
T 3fro_A 62 EVQVKVSYEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 133 (439)
T ss_dssp EEEEEEEEEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG
T ss_pred ccceeeeeccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh
Confidence 00000 01235788888876 21 12233333 222 23333333333331 56999999999888
Q ss_pred hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccc
Q 003947 395 NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYES 474 (784)
Q Consensus 395 ~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~ 474 (784)
++++.++++..++|+|++.|+.....++........+.. .........++..++.||.|+++|....+. ..+.|
T Consensus 134 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~~~~-- 207 (439)
T 3fro_A 134 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID---EWGFF-- 207 (439)
T ss_dssp HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH---THHHH--
T ss_pred hhhHHHHhhccCCCEEEEecccccccCchHHhCcccccc-ccccceeeHhhhhhhhccEEEecCHHHHHH---Hhhhh--
Confidence 888888989999999999999864332111000001100 001112234667899999999999887662 11100
Q ss_pred ccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCc----HHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCE
Q 003947 475 HTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYM----EEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550 (784)
Q Consensus 475 ~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~----~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~i 550 (784)
++. ..++.+||||+|.+.|.|.. ....+ ...++++|+ +++ ++
T Consensus 208 --------------~~~--~~~i~vi~ngvd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~-~~ 253 (439)
T 3fro_A 208 --------------RNF--EGKITYVFNGIDCSFWNESYLTGSRDERK---------------KSLLSKFGM--DEG-VT 253 (439)
T ss_dssp --------------GGG--TTSEEECCCCCCTTTSCGGGSCSCHHHHH---------------HHHHHHHTC--CSC-EE
T ss_pred --------------hhc--CCceeecCCCCCchhcCcccccchhhhhH---------------HHHHHHcCC--CCC-cE
Confidence 122 77999999999999998762 11111 134456776 455 99
Q ss_pred EEEEeccc-CCCChHHHHHHHHHhHccC--CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 551 LFTMARLD-RVKNLTGLVEWYGKNAKLR--ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 551 Il~vGRL~-~~Kgi~~LieA~~~l~~~~--~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
|+++||+. +.||++.+++|++++.+.. ++++|+|+|+|+. .+.+.+++++++++ +.+.|.| .
T Consensus 254 i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~---------~~~~~l~~~~~~~~--~~~~~~g----~ 318 (439)
T 3fro_A 254 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---------ELEGWARSLEEKHG--NVKVITE----M 318 (439)
T ss_dssp EEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH---------HHHHHHHHHHHHCT--TEEEECS----C
T ss_pred EEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh---------hHHHHHHHHHhhcC--CEEEEcC----C
Confidence 99999999 9999999999999998866 8999999999853 34477888899988 7788888 7
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKC 707 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~l 707 (784)
++.+++..+++. +|++|+||.+|+||++++||||||+|||+|+.||..|++.++ +|++++|+|+++++++|.+++
T Consensus 319 ~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll--- 393 (439)
T 3fro_A 319 LSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL--- 393 (439)
T ss_dssp CCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH---
Confidence 788999999995 999999999999999999999999999999999999999888 999999999999999998654
Q ss_pred cC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 708 KV-DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 708 l~-dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+ ||+.+++|++++++++ ++|||+.++++++++|+.
T Consensus 394 -~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 394 -ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp -HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHT
T ss_pred -hcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHH
Confidence 5 8999999999999999 889999999999999975
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=395.40 Aligned_cols=404 Identities=20% Similarity=0.277 Sum_probs=294.9
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
.+|||++++.+++|. ..+|.+..||.+.++. +|++.|+++||+|+ |+|....... ......
T Consensus 19 ~mmkIl~i~~~~~p~--~~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPL--QQPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTT--CC-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeecccc--ccCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 358999999887743 2345557899999999 56666799999999 8886532110 111111
Q ss_pred cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEE
Q 003947 333 YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI 412 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t 412 (784)
.++++++++|.....+ .++..++.++..|...+.+...+. ..+|||||+|++..++++.++++..++|+|.+
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 2468899888654322 222344555555555544442322 22499999998777777888888889999999
Q ss_pred ecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 413 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
.|+......... .... ..........++..++.+|.||++|....+...+. .|++
T Consensus 152 ~h~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~g~~- 206 (438)
T 3c48_A 152 AHTLAAVKNSYR----DDSD-TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH-------------------YDAD- 206 (438)
T ss_dssp CSSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHH-------------------HCCC-
T ss_pred ecCCcccccccc----cccC-CcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHH-------------------hCCC-
Confidence 999753221100 0000 00001112245667899999999998877632221 2333
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
..++.+||||+|.+.|.+...... ...++.+|+ ++++++|+++||+.+.||++.+++|+..
T Consensus 207 -~~k~~vi~ngvd~~~~~~~~~~~~----------------~~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 207 -PDRISVVSPGADVELYSPGNDRAT----------------ERSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp -GGGEEECCCCCCTTTSCCC----C----------------HHHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred -hhheEEecCCccccccCCcccchh----------------hhhHHhcCC--CCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 668999999999998877543210 012345666 5678899999999999999999999999
Q ss_pred hHccCC--CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 573 NAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 573 l~~~~~--~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
+.+..| +++|+|+|+.... . .+.+.++++++++++.++|.|+| .++.+++..+++. +|++|+||.+
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~----g---~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~ 335 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGP----N---ATPDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVAVPSFN 335 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC-------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEEECCSC
T ss_pred HHhhCCCcceEEEEEeCCCCC----C---cHHHHHHHHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEEECccc
Confidence 988766 8999999982110 0 22467888999999999999999 6778899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.+ |+
T Consensus 336 e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~-~s 410 (438)
T 3c48_A 336 ESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHART-FS 410 (438)
T ss_dssp CSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH-HH
T ss_pred cCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHh-CC
Confidence 999999999999999999999999999999999999999999999999998554 6999999999999999977 99
Q ss_pred HHHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSGV 744 (784)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (784)
|+.++++++++|+.
T Consensus 411 ~~~~~~~~~~~~~~ 424 (438)
T 3c48_A 411 WAATAAQLSSLYND 424 (438)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999975
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=398.36 Aligned_cols=329 Identities=16% Similarity=0.190 Sum_probs=236.9
Q ss_pred CCceEEEEcCCChhHHHHHHHHhC-------CCcEEEEecCCcccCC-CCCc-----chh---hh--cc---ccccccch
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKL-------DVTQCTIAHALELTKY-PDSD-----INW---KK--LD---DKYHFSCQ 440 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~-------gvp~V~t~H~l~~~k~-~~s~-----~~~---~~--~~---~~y~~~~~ 440 (784)
..+||+|+|+|.+++++.+++... ++|+|+|+|++..... +... ..+ .. +. ....+...
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 457899999999988888877553 6899999999754321 0000 000 00 00 00011112
Q ss_pred hhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhh
Q 003947 441 FTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLK 520 (784)
Q Consensus 441 ~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~ 520 (784)
....+.++..||.|+|+|+..++.+....+.- ..+. .... ..++.+|+||||.+.|.|.++......
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g-----~~l~------~~~~--~~~i~~I~NGiD~~~~~p~~d~~~~~~ 298 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIARG-----CELD------NIMR--LTGITGIVNGMDVSEWDPSKDKYITAK 298 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCCCC-----SSSC------CCSC--CCSCEECCCCCCTTTSCTTTCSSSSCC
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcccccc-----cccc------cccc--cCCeEEEECCcchhhcCCCCccccccc
Confidence 33456788999999999998876443321100 0000 0111 568999999999999998643211000
Q ss_pred cc-hhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHH
Q 003947 521 HF-HSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQ 599 (784)
Q Consensus 521 ~~-~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~ 599 (784)
.. ...++....++...++.+|+..+++.|+|+++||+.+.||++.|++|+.++.+ .+.+|+|+|.|..
T Consensus 299 ~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~--------- 367 (536)
T 3vue_A 299 YDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK--------- 367 (536)
T ss_dssp CCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH---------
T ss_pred cchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEEeccCc---------
Confidence 00 00011112233455677888778899999999999999999999999999976 4689999998854
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003947 600 AEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII 679 (784)
Q Consensus 600 ~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI 679 (784)
.....++.....+ .+++.+.+ ..+.+++..+++. +|+||+||.+|+||++++|||+||+|||+|+.||++|+|
T Consensus 368 ~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V 440 (536)
T 3vue_A 368 KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTV 440 (536)
T ss_dssp HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHC
T ss_pred hHHHHHHHHHhhc--CCceEEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchhee
Confidence 2233445555544 46899998 6677888888885 999999999999999999999999999999999999999
Q ss_pred ccCceEE----------EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003947 680 VHGKSGF----------HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYG 746 (784)
Q Consensus 680 ~dg~~G~----------li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~ 746 (784)
.||++|+ +++|.|+++++++|.+++ .+.+++. |++|+++|. .++|||++.|++|+++|+..+
T Consensus 441 ~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral-~~~~~~~-~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 441 IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI-KVVGTPA-YEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH-HHTTSHH-HHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred eCCCCccccccCCCceeEECCCCHHHHHHHHHHHH-HhcCcHH-HHHHHHHHH---HhcCCHHHHHHHHHHHHHHhh
Confidence 9999999 677889999999999887 4556664 778887774 468999999999999998764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=362.98 Aligned_cols=368 Identities=18% Similarity=0.272 Sum_probs=280.1
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
++|||++++++.. |..||.+.++. .|++.| +||+|+ |+|...+.. .....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~-------~~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAE-------EAHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHH-------HHHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCcc-------chhhh
Confidence 4589999997755 45799999999 555566 699999 888653221 00112
Q ss_pred cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCc-EEE
Q 003947 333 YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT-QCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp-~V~ 411 (784)
....++.++++|..... +.. .+...+.+.+.+ .+||+||+|...+......++++.++| +|.
T Consensus 53 ~~~~~~~~~~~~~~~~~-------------~~~-~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVML-------------PTP-TTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSCC-------------SCH-HHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEccccccc-------------cch-hhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 23346888888864321 111 122233333333 389999999877654445557778887 888
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+... .|.. ... .....+..++.+|.|+++|....+...+. .+.
T Consensus 116 ~~h~~~~--------~~~~-~~~-----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~- 161 (394)
T 3okp_A 116 STHGHEV--------GWSM-LPG-----SRQSLRKIGTEVDVLTYISQYTLRRFKSA-------------------FGS- 161 (394)
T ss_dssp ECCSTHH--------HHTT-SHH-----HHHHHHHHHHHCSEEEESCHHHHHHHHHH-------------------HCS-
T ss_pred Eeccchh--------hhhh-cch-----hhHHHHHHHHhCCEEEEcCHHHHHHHHHh-------------------cCC-
Confidence 9997532 1110 000 11123456889999999998877632221 111
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+++||+.+.||++.+++|+.
T Consensus 162 --~~~~~vi~ngv~~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 162 --HPTFEHLPSGVDVKRFTPATPEDK----------------SATRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp --SSEEEECCCCBCTTTSCCCCHHHH----------------HHHHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred --CCCeEEecCCcCHHHcCCCCchhh----------------HHHHHhcCC--CcCceEEEEEeccccccCHHHHHHHHH
Confidence 569999999999999988433321 123455676 667799999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC-
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY- 650 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~- 650 (784)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+++. +|++|+||..
T Consensus 222 ~l~~~~~~~~l~i~G~g~~-----------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~ 283 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY-----------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPARTR 283 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT-----------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCCB
T ss_pred HHHhhCCCeEEEEEcCchH-----------HHHHHHHH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCccc
Confidence 9988889999999999864 24555665 56778999999 7778999999995 9999999999
Q ss_pred ------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 651 ------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 651 ------E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+ +++|++.+++|+++++++
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~----l~~~~~~~~~~~~~~~~~ 358 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIE----LLDDPIRRAAMGAAGRAH 358 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHH----HHTCHHHHHHHHHHHHHH
T ss_pred cccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999999999974 457999999999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHH
Q 003947 725 IQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 725 v~~~ytw~~~a~~ll~ly~~ 744 (784)
+.++|||+.++++++++|+.
T Consensus 359 ~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 359 VEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHHHTBHHHHHHHHHHHHHS
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 98999999999999999875
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=373.99 Aligned_cols=426 Identities=15% Similarity=0.146 Sum_probs=280.8
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC----------
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT---------- 324 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~---------- 324 (784)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999776531 24699999999 56666799999999 8886532110000
Q ss_pred -cCcceeee-cCcCCeEEEEccCCC---Ccc-ccc-----ccccccCChhhHHHHHHHHHHHHHHHcC--CCceEEEEcC
Q 003947 325 -CGQRVEKV-YGTKYSDILRVPFRT---EEG-IVR-----KWISRFEVWPYLETFTEDVATEIIQELQ--CKPDLIIGNY 391 (784)
Q Consensus 325 -~~~~~e~v-~~~~~v~IlrvP~~~---~~~-~~~-----~~isr~~l~~yl~~f~~~~~~~i~~~~~--~~pDIIh~~~ 391 (784)
.+...+.. ...+++.+++++... ..+ ... .|.. .+..+..+...+. .+.+.+. .+|||||+|.
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~Divh~~~ 137 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTD---NVLRFALLGWVGA-EMASGLDPFWRPDVVHAHD 137 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCTT---HHHHHHHHHHHHH-HHTTTSSTTCCCSEEEEET
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCCc---hHHHHHHHHHHHH-HHHHHhccCCCCCEEEeec
Confidence 00000000 012468888876321 000 000 0000 0001111222222 2222222 6899999999
Q ss_pred CChhHHHHHHH-HhCCCcEEEEecCCcccCC-CCCcchhhhcccc------ccccchhhhhHHHhcccCEEEecChHhHh
Q 003947 392 SDGNIVASLLA-HKLDVTQCTIAHALELTKY-PDSDINWKKLDDK------YHFSCQFTADLFAMNRTDFIITSTFQEIA 463 (784)
Q Consensus 392 ~~~~lva~lla-r~~gvp~V~t~H~l~~~k~-~~s~~~~~~~~~~------y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (784)
+.+++++.+++ +..++|+|+|.|+...... .........+... ..+......++..++.||.||++|+..++
T Consensus 138 ~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 217 (485)
T 2qzs_A 138 WHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAR 217 (485)
T ss_dssp GGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHH
T ss_pred cchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHH
Confidence 77777777777 6789999999999743211 0000000000000 00111123456778999999999988776
Q ss_pred hccccccccccccccccccceeeecCCCC------CC--CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 464 GSKDTVGQYESHTAFSLPGLYRVVNGIDA------FD--PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 464 ~~~~~vgqYe~~~~f~~p~l~~~~~gi~~------f~--~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
.+.+. ..|++. .. .++.+||||+|.+.|.|.........-....+....-....
T Consensus 218 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 218 EITEP------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp HTTSH------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred HHhcc------------------ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 33221 001110 02 68999999999998877532100000000000000000123
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
.++++|+..++++++|+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+. .+.+.+++++++++
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---------~~~~~l~~~~~~~~-- 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP---------VLQEGFLAAAAEYP-- 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH---------HHHHHHHHHHHHST--
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch---------HHHHHHHHHHHhCC--
Confidence 4456777333378999999999999999999999999976 4899999999852 24567788888876
Q ss_pred CcEE-EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceE
Q 003947 616 GQFR-WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG---------KSG 685 (784)
Q Consensus 616 ~~V~-flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg---------~~G 685 (784)
++|. |.| . +.+++..+|+. +|++|+||.+|+||++++||||||+|||+|+.||+.|++.++ .+|
T Consensus 347 ~~v~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G 420 (485)
T 2qzs_A 347 GQVGVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG 420 (485)
T ss_dssp TTEEEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCB
T ss_pred CcEEEeCC----C-CHHHHHHHHHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccce
Confidence 6886 787 3 45677899995 999999999999999999999999999999999999999998 899
Q ss_pred EEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 686 FHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 686 ~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++++|++++|++|.+++ .+..|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 421 ~l~~~~d~~~la~~i~~ll-~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 421 FVFEDSNAWSLLRAIRRAF-VLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp EEECSSSHHHHHHHHHHHH-HHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 9999999999999998654 233799999999999974 799999999999999975
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=371.31 Aligned_cols=432 Identities=14% Similarity=0.173 Sum_probs=280.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCC--C--------
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGT--T-------- 324 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~--~-------- 324 (784)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+..... .
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAAVTDPVKCFEFT 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHHCCSCEEEEEES
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccccccccceeEEEE
Confidence 7999999877631 24699999999 66666799999999 888653211000 0
Q ss_pred --cCcceeee-cCcCCeEEEEccCCCC---c-ccccccccccCChh---hHHHHHHHHHHHHHHHc--CCCceEEEEcCC
Q 003947 325 --CGQRVEKV-YGTKYSDILRVPFRTE---E-GIVRKWISRFEVWP---YLETFTEDVATEIIQEL--QCKPDLIIGNYS 392 (784)
Q Consensus 325 --~~~~~e~v-~~~~~v~IlrvP~~~~---~-~~~~~~isr~~l~~---yl~~f~~~~~~~i~~~~--~~~pDIIh~~~~ 392 (784)
.+...... ....++++++++.... . ++... ........ .+..|...+. .+.+.+ ..+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~DiIh~~~~ 139 (485)
T 1rzu_A 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLG-QTGKDYPDNWKRFAALSLAAA-RIGAGVLPGWRPDMVHAHDW 139 (485)
T ss_dssp CSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBC-TTSSBCTTHHHHHHHHHHHHH-HHHTTCSSSCCCSEEEEEHH
T ss_pred EecCCeEEEEEEEecCceEEEEeChHHhCCCccccCC-cccccccchHHHHHHHHHHHH-HHHHHhccCCCCCEEEeccc
Confidence 00000000 0124688888764210 0 00000 00000000 1111222222 333322 568999999987
Q ss_pred ChhHHHHHHHHh--CCCcEEEEecCCcccCC-CCCcc-----hhhhcc-ccccccchhhhhHHHhcccCEEEecChHhHh
Q 003947 393 DGNIVASLLAHK--LDVTQCTIAHALELTKY-PDSDI-----NWKKLD-DKYHFSCQFTADLFAMNRTDFIITSTFQEIA 463 (784)
Q Consensus 393 ~~~lva~llar~--~gvp~V~t~H~l~~~k~-~~s~~-----~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (784)
.+++++.++++. .++|+|++.|+...... ..... .+..+. ....+......++..++.||.||++|+..++
T Consensus 140 ~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 219 (485)
T 1rzu_A 140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAE 219 (485)
T ss_dssp HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHH
T ss_pred chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHH
Confidence 666677777765 89999999999753211 00000 000000 0000111113456778999999999998776
Q ss_pred hccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccc
Q 003947 464 GSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVL 543 (784)
Q Consensus 464 ~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll 543 (784)
.+.+.. |. +.++.+ +.....++.+||||+|.+.|.|..............++...-+....++++|+
T Consensus 220 ~~~~~~--~g----~~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 286 (485)
T 1rzu_A 220 EILTAE--FG----MGLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI- 286 (485)
T ss_dssp HTTSHH--HH----TTCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC-
T ss_pred HHhccc--cC----cchHHH------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCC-
Confidence 332210 00 000000 00125689999999999988875421000000000000000001133456776
Q ss_pred cCCC-CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE-Ec
Q 003947 544 KDSS-KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR-WI 621 (784)
Q Consensus 544 ~~~~-k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~-fl 621 (784)
+++ +++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++ ++|. |.
T Consensus 287 -~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---------~~~~~l~~~~~~~~--~~v~~~~ 352 (485)
T 1rzu_A 287 -DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV---------ALEGALLAAASRHH--GRVGVAI 352 (485)
T ss_dssp -CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH---------HHHHHHHHHHHHTT--TTEEEEE
T ss_pred -CCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch---------HHHHHHHHHHHhCC--CcEEEec
Confidence 333 6799999999999999999999999976 4899999999852 23467788888875 6887 78
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG---------KSGFHIDPYK 692 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg---------~~G~li~p~d 692 (784)
| . +.+++..+++. +|++|+||.+|+||++++||||||+|||+|+.||+.|++.++ .+|++++++|
T Consensus 353 g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d 426 (485)
T 1rzu_A 353 G----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT 426 (485)
T ss_dssp S----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS
T ss_pred C----C-CHHHHHHHHhc-CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCC
Confidence 7 3 45677899995 999999999999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++++|.+++ .+.+|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 427 ~~~la~~i~~ll-~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 427 LDGLKQAIRRTV-RYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHHHH-HHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 999999998654 233799999999999974 789999999999999974
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=355.67 Aligned_cols=358 Identities=18% Similarity=0.258 Sum_probs=262.5
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccc
Q 003947 275 PDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRK 354 (784)
Q Consensus 275 p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~ 354 (784)
|..||.+.++. +|++.|+++||+|+ |+|...+... . ...+++.+..++......
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~--------~--~~~~~i~~~~~~~~~~~~---- 77 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRL--------N--KVYPNIYFHEVTVNQYSV---- 77 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCcc--------c--ccCCceEEEecccccccc----
Confidence 55799999999 56666799999999 8886532110 0 112356666555432110
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChh-HHHHHHHHhC--CCcEEEEecCCcccCCCCCcchhhhc
Q 003947 355 WISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGN-IVASLLAHKL--DVTQCTIAHALELTKYPDSDINWKKL 431 (784)
Q Consensus 355 ~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~-lva~llar~~--gvp~V~t~H~l~~~k~~~s~~~~~~~ 431 (784)
+....+...+...+.+.+.+ .+||+||+|+..+. +.+.++++.. ++|+|.+.|+........
T Consensus 78 ----~~~~~~~~~~~~~l~~~l~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 78 ----FQYPPYDLALASKMAEVAQR---ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHH---HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ----cccccccHHHHHHHHHHHHH---cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 11111222233334444443 38999999987654 3444444444 599999999853211100
Q ss_pred cccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCC
Q 003947 432 DDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFP 511 (784)
Q Consensus 432 ~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p 511 (784)
...+ ...++..++.+|.||++|+...+...+. .+. ..++.+||||+|.+.|.+
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~---~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETHEL-------------------VKP---NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHHHH-------------------TCC---SSCEEECCCCCCTTTCCC
T ss_pred CHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHHh-------------------hCC---cccEEEecCCccHHhcCC
Confidence 0001 1124457889999999998877632221 111 468999999999998877
Q ss_pred CcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCC
Q 003947 512 YMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK 591 (784)
Q Consensus 512 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~ 591 (784)
..... .++.+|+ ++++++|+++||+.+.||++.+++|+..+.+. ++++|+|+|+|+.
T Consensus 196 ~~~~~-------------------~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQ-------------------LKKEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHH-------------------HHHHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred cchHH-------------------HHHHcCC--CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-
Confidence 53322 1234555 46788999999999999999999999999875 5799999998854
Q ss_pred CcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 003947 592 ESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 671 (784)
Q Consensus 592 ~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~ 671 (784)
.+.++++++++++.++|.|+|. .+++..+++. +|++|+||..|+||++++|||+||+|||+|+
T Consensus 253 ----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~~ 315 (394)
T 2jjm_A 253 ----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGTR 315 (394)
T ss_dssp ----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEEC
T ss_pred ----------HHHHHHHHHHcCCCCeEEEeCc------hhhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEec
Confidence 3668889999999999999994 2468888885 9999999999999999999999999999999
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 672 NGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 672 ~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.++++++++|+.
T Consensus 316 ~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 316 VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998554 699999999999999999999999999999999975
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=358.84 Aligned_cols=367 Identities=15% Similarity=0.212 Sum_probs=262.6
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++++.. | .||.+.++. +|++.|+++||+|+ |+|...+.. .
T Consensus 1 MkIl~i~~~~~---------~-~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~-------------~ 45 (374)
T 2iw1_A 1 MIVAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGD-------------C 45 (374)
T ss_dssp -CEEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSC-------------C
T ss_pred CeEEEEEeecC---------C-CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCC-------------C
Confidence 79999987654 2 499999999 56666799999999 888652211 0
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEec
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H 414 (784)
.+++++.++|...... ......+...+.+.+. ..+||+||+|...+++.+..+++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLK---EHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHH---HSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHh---ccCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1367888888653211 0111222233333333 3489999998865432221112222222222223
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhc--ccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN--RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~--~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
+... .....+.+.. ..++..+. .+|.|+++|+...+...+ ..|++
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~-------------------~~~~~- 158 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQK-------------------HYQTE- 158 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHH-------------------HHCCC-
T ss_pred cchh-----------hhcHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHHHHHH-------------------HhCCC-
Confidence 2110 0111111111 12333343 799999999887763221 12333
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
..++.+||||+|.+.|.|......+ ...++++|+ ++++++|+++||+.+.||++.+++|+..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -hhheEEecCCcCHHhcCcccchhHH---------------HHHHHHhCC--CCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 5689999999999888764321110 123355676 5678899999999999999999999999
Q ss_pred hHcc-CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCC
Q 003947 573 NAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 651 (784)
Q Consensus 573 l~~~-~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 651 (784)
+.+. .++++|+|+|+|+. +.++++++++++.++|.|+|. .+++..+++. +|++|+||.+|
T Consensus 221 l~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~e 281 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQE 281 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSCC
T ss_pred hHhccCCceEEEEEcCCCH------------HHHHHHHHHcCCCCcEEECCC------cccHHHHHHh-cCEEEeccccC
Confidence 8765 57899999999854 457788899999999999994 2468889995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 652 AFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHID-PYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~-p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
+||++++|||+||+|||+|+.||..|++.++.+|++++ |+|+++++++|.+++ +|++.+++|++++++++ ++|+
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~ 356 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQD 356 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHSC
T ss_pred CcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHH-HHhh
Confidence 99999999999999999999999999999999999998 899999999998554 69999999999999998 5789
Q ss_pred HHHHHHHHHHHHHHh
Q 003947 731 WKIYSERLLNLSGVY 745 (784)
Q Consensus 731 w~~~a~~ll~ly~~~ 745 (784)
|...++++.++++.+
T Consensus 357 ~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 357 LYSLPEKAADIITGG 371 (374)
T ss_dssp CSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988743
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=354.52 Aligned_cols=363 Identities=13% Similarity=0.168 Sum_probs=264.3
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceee
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEK 331 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~ 331 (784)
.++|||++++++.. +..||.+.++. .+++.|+++||+|+ +++........ .....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~----~~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKL----PDYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCC----CTTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccC----Ccccc
Confidence 45699999996443 34589999999 56666799999999 88876433210 01111
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEE
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCT 411 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~ 411 (784)
.. + +++++|..... .+... ...+...+.+.+.+. +||+||+|.......+.++++..++|+|.
T Consensus 73 ~~---~-~~~~~~~~~~~-------~~~~~---~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGSV-------ARLRF---GPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC-------------------C---CHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCCc-------ccccc---cHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 34445532210 01111 011222333333333 89999999887755577778888999999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+..... ..+.. .++ . .+ ..++.+|.+|++|....+...+ +++
T Consensus 136 ~~h~~~~~~-----~~~~~---~~~----~-~~-~~~~~~d~ii~~s~~~~~~~~~---------------------~~~ 180 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSV---FQG----I-LR-PYHEKIIGRIAVSDLARRWQME---------------------ALG 180 (406)
T ss_dssp EECCCCCSH-----HHHHH---HHS----T-TH-HHHTTCSEEEESSHHHHHHHHH---------------------HHS
T ss_pred EEcCcchhh-----hhHHH---HHH----H-HH-HHHhhCCEEEECCHHHHHHHHH---------------------hcC
Confidence 999853211 01111 111 1 11 4688999999999887663221 112
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc-cCCCChHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL-DRVKNLTGLVEWY 570 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL-~~~Kgi~~LieA~ 570 (784)
..++ +||||+|.+.|.+.... .++ ++++++|+++||+ .+.||++.+++++
T Consensus 181 --~~~~-vi~~~v~~~~~~~~~~~------------------------~~~--~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 181 --SDAV-EIPNGVDVASFADAPLL------------------------DGY--PREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp --SCEE-ECCCCBCHHHHHTCCCC------------------------TTC--SCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred --CCcE-EecCCCChhhcCCCchh------------------------hhc--cCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 4578 99999998766543210 111 2356899999999 9999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-
Q 003947 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL- 649 (784)
Q Consensus 571 ~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~- 649 (784)
.++.+..++++|+|+|+++ . +.++++++++ .++|.|+| .++..++..+++. +|++|+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~~-----------~-~~l~~~~~~~--~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~ 292 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRGD-----------E-DELREQAGDL--AGHLRFLG----QVDDATKASAMRS-ADVYCAPHLG 292 (406)
T ss_dssp HHHHTTSTTCEEEEESCSC-----------H-HHHHHHTGGG--GGGEEECC----SCCHHHHHHHHHH-SSEEEECCCS
T ss_pred HHHHHHCCCeEEEEEcCCc-----------H-HHHHHHHHhc--cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCCC
Confidence 9998888899999999984 1 5567777776 68999999 7778899999995 999999996
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003947 650 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKY 729 (784)
Q Consensus 650 ~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~y 729 (784)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+|++++++++. +|
T Consensus 293 ~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL----EDDQLRAGYVARASERVH-RY 367 (406)
T ss_dssp CCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHGG-GG
T ss_pred CCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH-hC
Confidence 9999999999999999999999999999999999999999999999999998554 699999999999999997 99
Q ss_pred CHHHHHHHHHHHHHH
Q 003947 730 TWKIYSERLLNLSGV 744 (784)
Q Consensus 730 tw~~~a~~ll~ly~~ 744 (784)
+|+.++++++++|+.
T Consensus 368 s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 368 DWSVVSAQIMRVYET 382 (406)
T ss_dssp BHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999985
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=349.37 Aligned_cols=287 Identities=20% Similarity=0.235 Sum_probs=222.4
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
.+|||||+|.+.+...+.++++ ++|+|.+.|+..... ....| ++ .+ ..+..+|.+|+++...
T Consensus 125 ~~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~---~~~~~-------~~-----~~-~~~~~~~~~i~~~s~~ 186 (416)
T 2x6q_A 125 SSFDYVLVHDPQPAALIEFYEK--KSPWLWRCHIDLSSP---NREFW-------EF-----LR-RFVEKYDRYIFHLPEY 186 (416)
T ss_dssp GGSSEEEEESSTTGGGGGGSCC--CSCEEEECCSCCSSC---CHHHH-------HH-----HH-HHHTTSSEEEESSGGG
T ss_pred cCCCEEEEeccchhhHHHHHHh--cCCEEEEEccccCCc---cHHHH-------HH-----HH-HHHHhCCEEEEechHH
Confidence 4899999998876544443332 389999999854211 00011 11 11 2356777776444322
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCc--HHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYM--EEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~--~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
.. + +++ ..++.+||||+|...|.+.. .... ...+++
T Consensus 187 ~~---~---------------------~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~----------------~~~r~~ 224 (416)
T 2x6q_A 187 VQ---P---------------------ELD--RNKAVIMPPSIDPLSEKNVELKQTEI----------------LRILER 224 (416)
T ss_dssp SC---T---------------------TSC--TTTEEECCCCBCTTSTTTSCCCHHHH----------------HHHHHH
T ss_pred HH---h---------------------hCC--ccceEEeCCCCChhhhcccccChhhH----------------HHHHHH
Confidence 11 0 122 46899999999987775421 1111 122355
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
+|+ ++++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|+|+.. +. ...+.++++++++++.++|.
T Consensus 225 ~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~---~~---~~~~~l~~~~~~~~~~~~V~ 296 (416)
T 2x6q_A 225 FDV--DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHD---DP---EGWIYFEKTLRKIGEDYDVK 296 (416)
T ss_dssp TTC--CTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTT---CH---HHHHHHHHHHHHHTTCTTEE
T ss_pred hCC--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCccc---ch---hHHHHHHHHHHHhCCCCcEE
Confidence 676 66789999999999999999999999999888899999999999641 11 23456778889999999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
|+|+.+ .++.+++..+++. +|++|+||..|+||++++||||||+|||+|+.||..|++.++.+|++++ |+++++++
T Consensus 297 ~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~ 372 (416)
T 2x6q_A 297 VLTNLI-GVHAREVNAFQRA-SDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEV 372 (416)
T ss_dssp EEEGGG-TCCHHHHHHHHHH-CSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHH
T ss_pred EecccC-CCCHHHHHHHHHh-CCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHH
Confidence 999554 3457799999995 9999999999999999999999999999999999999999999999997 99999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.+++ +||+.+++|+++|++++.++|||+.++++++++|+.
T Consensus 373 i~~ll----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 373 VLYLL----KHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHHHH----HCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred HHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 98554 699999999999999998899999999999999874
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=339.88 Aligned_cols=359 Identities=13% Similarity=0.108 Sum_probs=261.1
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|.... |......
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~---g~~~~~~------ 48 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAF---GRSVHAN------ 48 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCC---SCCSCSS------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCC---Ccccccc------
Confidence 8999999764 34599999999 666667999 9999 8875432 1100000
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCc----EE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT----QC 410 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp----~V 410 (784)
.......... .. .+.+.. .+.+ ..+.+.+... +||+||+|++ ....+..+++..++| .+
T Consensus 49 ---~~~~~~~~~~---~~-~~~~~~-~~~~-----~~l~~~l~~~---~~Div~~~~~-~~~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 49 ---IEEFDAQTAE---HV-RGLNEQ-GFYY-----SGLSEFIDVH---KPDIVMIYND-PIVIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp ---SEEEEHHHHH---HH-TTCCST-TCCH-----HHHHHHHHHH---CCSEEEEEEC-HHHHHHHHHHGGGCCSCCEEE
T ss_pred ---cccCCccccc---cc-cccccc-cchH-----HHHHHHHHhc---CCCEEEEcch-HHHHHHHHHHhccCCCCCcee
Confidence 1110100000 00 011100 0111 1123333333 8999999954 445566666666655 34
Q ss_pred EEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccC--EEEecChHhHhhccccccccccccccccccceeeec
Q 003947 411 TIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTD--FIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVN 488 (784)
Q Consensus 411 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD--~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~ 488 (784)
...|...... ... .+..++.+| .||++|....+...+ .
T Consensus 112 ~~~~~~~~~~--------~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~--------------------~ 151 (413)
T 3oy2_A 112 LYVDLVSKNI--------REN------------LWWIFSHPKVVGVMAMSKCWISDICN--------------------Y 151 (413)
T ss_dssp EEECCCSBSC--------CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH--------------------T
T ss_pred eeccccchhh--------HHH------------HHHHHhccCCceEEEcCHHHHHHHHH--------------------c
Confidence 4444332110 000 123578888 999999887763222 1
Q ss_pred CCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHH
Q 003947 489 GIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE 568 (784)
Q Consensus 489 gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~Lie 568 (784)
|+ +.++.+||||+|.+.|.. . ++.+++....++++|+++||+.+.||++.+++
T Consensus 152 ~~---~~~~~vi~ngvd~~~~~~---~---------------------~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~ 204 (413)
T 3oy2_A 152 GC---KVPINIVSHFVDTKTIYD---A---------------------RKLVGLSEYNDDVLFLNMNRNTARKRLDIYVL 204 (413)
T ss_dssp TC---CSCEEECCCCCCCCCCTT---H---------------------HHHTTCGGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred CC---CCceEEeCCCCCHHHHHH---H---------------------HHhcCCCcccCceEEEEcCCCchhcCcHHHHH
Confidence 22 568999999999987711 1 12345522237899999999999999999999
Q ss_pred HHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc-------EEEccCcCCcCChhHHHHHHHccc
Q 003947 569 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ-------FRWISSQMNRVRNGELYRYICDTK 641 (784)
Q Consensus 569 A~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~-------V~flG~~~~~v~~~el~~~la~aa 641 (784)
|+.++.+..++++|+|+|+|+..... ...+.++++++++++.++ |.+.| .++.+++..+|+. +
T Consensus 205 a~~~l~~~~~~~~l~ivG~g~~~~~~-----~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~-a 274 (413)
T 3oy2_A 205 AAARFISKYPDAKVRFLCNSHHESKF-----DLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDMMYNA-C 274 (413)
T ss_dssp HHHHHHHHCTTCCEEEEEECCTTCSC-----CHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-C
T ss_pred HHHHHHHhCCCcEEEEEeCCcccchh-----hHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHHHHHh-C
Confidence 99999888899999999999752111 123667888999999987 78888 7888999999995 9
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCce---------------EE--EECCCCHHHHHHHHHHHH
Q 003947 642 GAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKS---------------GF--HIDPYKGDQATGILVDFF 704 (784)
Q Consensus 642 dvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~---------------G~--li~p~d~e~lAe~I~~~l 704 (784)
|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+ |+ +++++|+++++++| +++
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~ 353 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF 353 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred CEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh
Confidence 9999999999999999999999999999999999999999887 99 99999999999999 765
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 705 EKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 705 ~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+||+.+++|++++++++.++|||+.++++++++|+.
T Consensus 354 ----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 354 ----KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp ----TSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 699999999999999998999999999999999985
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=325.69 Aligned_cols=311 Identities=14% Similarity=0.068 Sum_probs=240.7
Q ss_pred ceEEEEEccC--------ccccccCccCCC-CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC
Q 003947 254 VFNVVIFTPH--------GYFAQDNVLGYP-DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT 324 (784)
Q Consensus 254 ~mkI~ivs~h--------~~~~~~~~lg~p-~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~ 324 (784)
+|||++++++ .+|. .| ..||.+.++. +|++.|+++||+|+ ++|...+...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~------~p~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~--- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISV------PPQGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG--- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCS------SCSSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC---
T ss_pred ccEEEEEeccccccCccccccc------CcccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC---
Confidence 3899999987 2211 12 3599999999 55666789999999 8886532210
Q ss_pred cCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh
Q 003947 325 CGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK 404 (784)
Q Consensus 325 ~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~ 404 (784)
.+++.+++.+ .+. .+.+.+. ..+||+||+|.+.....+ ++.
T Consensus 62 ----------~~~~~~~~~~----------------~~~-------~l~~~l~---~~~~Dvi~~~~~~~~~~~---~~~ 102 (342)
T 2iuy_A 62 ----------RPGLTVVPAG----------------EPE-------EIERWLR---TADVDVVHDHSGGVIGPA---GLP 102 (342)
T ss_dssp ----------STTEEECSCC----------------SHH-------HHHHHHH---HCCCSEEEECSSSSSCST---TCC
T ss_pred ----------CCcceeccCC----------------cHH-------HHHHHHH---hcCCCEEEECCchhhHHH---Hhh
Confidence 1233332211 010 2222333 238999999987764332 567
Q ss_pred CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccce
Q 003947 405 LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLY 484 (784)
Q Consensus 405 ~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~ 484 (784)
.++| |.+.|+..... ..+|.||++|+..++...
T Consensus 103 ~~~p-v~~~h~~~~~~----------------------------~~~d~ii~~S~~~~~~~~------------------ 135 (342)
T 2iuy_A 103 PGTA-FISSHHFTTRP----------------------------VNPVGCTYSSRAQRAHCG------------------ 135 (342)
T ss_dssp TTCE-EEEEECSSSBC----------------------------SCCTTEEESCHHHHHHTT------------------
T ss_pred cCCC-EEEecCCCCCc----------------------------ccceEEEEcCHHHHHHHh------------------
Confidence 8999 99999864311 018999999988776211
Q ss_pred eeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChH
Q 003947 485 RVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLT 564 (784)
Q Consensus 485 ~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~ 564 (784)
. ..++.+||||+|.+.|.+... . .+++++|+++||+.+.||++
T Consensus 136 ------~--~~~~~vi~ngvd~~~~~~~~~--------------------------~---~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 ------G--GDDAPVIPIPVDPARYRSAAD--------------------------Q---VAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp ------C--CTTSCBCCCCBCGGGSCCSTT--------------------------C---CCCCSCEEEESCCCGGGTHH
T ss_pred ------c--CCceEEEcCCCChhhcCcccc--------------------------c---CCCCCEEEEEeccccccCHH
Confidence 1 457889999999988766431 0 23567899999999999999
Q ss_pred HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEE
Q 003947 565 GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 644 (784)
Q Consensus 565 ~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvf 644 (784)
.+++|++++ +++|+|+|+|+. .+.+++++++++ ++|+|+| .++..++..+++. +|++
T Consensus 179 ~li~a~~~~-----~~~l~i~G~g~~-----------~~~l~~~~~~~~--~~v~~~g----~~~~~~l~~~~~~-adv~ 235 (342)
T 2iuy_A 179 EAAAFAHAC-----GRRLVLAGPAWE-----------PEYFDEITRRYG--STVEPIG----EVGGERRLDLLAS-AHAV 235 (342)
T ss_dssp HHHHHHHHH-----TCCEEEESCCCC-----------HHHHHHHHHHHT--TTEEECC----CCCHHHHHHHHHH-CSEE
T ss_pred HHHHHHHhc-----CcEEEEEeCccc-----------HHHHHHHHHHhC--CCEEEec----cCCHHHHHHHHHh-CCEE
Confidence 999999986 689999999864 245666777777 7999999 7778899999995 9999
Q ss_pred EeCCC----------CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 003947 645 VQPAL----------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH--GKSGFHIDPYKGDQATGILVDFFEKCKVDPG 712 (784)
Q Consensus 645 V~PS~----------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d--g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~ 712 (784)
|+||. .|+||++++|||+||+|||+|+.||..|++.+ +.+|+++++ |+++++++|.+ +++
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~----l~~--- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAG----LPA--- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHT----SCC---
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHH----HHH---
Confidence 99999 89999999999999999999999999999999 999999999 99999999974 444
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 713 HWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 713 ~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++++++.++|||+.++++++++|+.
T Consensus 308 -----~~~~~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 308 -----SDEVRRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp -----HHHHHHHHHHHHBHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 678899999999999999999999975
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=314.07 Aligned_cols=346 Identities=10% Similarity=0.028 Sum_probs=225.8
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceee
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEK 331 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~ 331 (784)
+..|||++++++..++ ...||.. .+. +|+++|+++||+|+ |+|+.... . ......
T Consensus 44 ~~~mrI~~v~~~~~p~-------~~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~-~----~~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQE-------HMFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATP-N----PKDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGG-------GCSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCC-C----HHHHGG
T ss_pred CCCceEEEEeCCCCcc-------ccccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCC-C----hHHHHh
Confidence 3469999999888743 1347764 466 67777899999999 99976321 0 000000
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHH-------h
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH-------K 404 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar-------~ 404 (784)
+ .+.... |+.....+.. .+..+... ..... ...+||+||++++.++..+..+.+ .
T Consensus 99 ~---~~~~~~--~~~~~~~~~~------~i~~~~~~-----~~~~~--~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 F---KSFKYV--MPEEDKDFAL------QIVPFNDR-----YNRTI--PVAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp G---TTSEEC--CTTCCCCCSE------EEEECSCC-----TTCCE--EECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred h---hcccee--eccCCccccc------eeeecccc-----ccccc--cCCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 1 111111 1111100000 00000000 00000 023699999998766555544421 1
Q ss_pred CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccC--EEEecChHhHhhcccccccccccccccccc
Q 003947 405 LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTD--FIITSTFQEIAGSKDTVGQYESHTAFSLPG 482 (784)
Q Consensus 405 ~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD--~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~ 482 (784)
.+.+.+..+|+.++..+.... . .......+..++ .+|++|...++.+.+
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------~------~~~~~~~~~~~~~~~vi~~S~~~~~~l~~--------------- 211 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------Q------YVLAESTYKYRGPQIAVFNSELLKQYFNN--------------- 211 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------H------HHHHHHTTSCCSCEEEEEESHHHHHHHHH---------------
T ss_pred ccCcEEEEEeechhhcCccCh--------H------HHHHHHHhccCCceEEEEcCHHHHHHHHH---------------
Confidence 256778888886542211110 0 011223455555 588899887763221
Q ss_pred ceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc-cCCC
Q 003947 483 LYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL-DRVK 561 (784)
Q Consensus 483 l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL-~~~K 561 (784)
.|++ .+++.++|||+|.+.|.+.. .+ .++++.|+++||+ .+.|
T Consensus 212 -----~g~~--~~~~~~i~~g~d~~~~~~~~--------------------------~~---~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 212 -----KGYN--FTDEYFFQPKINTTLKNYIN--------------------------DK---RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp -----HTCC--CSEEEEECCCCCHHHHTTTT--------------------------SC---CCCCSEEEEEECTTCGGG
T ss_pred -----cCCC--CCceEEeCCCcCchhhcccc--------------------------cc---cCCCCEEEEEecCchhcc
Confidence 1333 35789999999976554310 01 2456788899997 6889
Q ss_pred ChHHHHHHHHHhHccCCC---eEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHH
Q 003947 562 NLTGLVEWYGKNAKLREL---VNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYIC 638 (784)
Q Consensus 562 gi~~LieA~~~l~~~~~~---v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la 638 (784)
|++.+++|++.+.+..|+ ++|+++|+++.. .++++.++|+|+| .++.+++.++|+
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~------------------~~l~~~~~v~f~G----~~~~~~l~~~~~ 313 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD------------------IALGKGIHLNSLG----KLTLEDYADLLK 313 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC------------------EEEETTEEEEEEE----SCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh------------------hhcCCcCcEEEcC----CCCHHHHHHHHH
Confidence 999999999999877675 899999998651 3467778999999 677899999999
Q ss_pred ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 003947 639 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEIS 718 (784)
Q Consensus 639 ~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~ 718 (784)
. +|+||+||.+|+||++++||||||+|||++ .||..|++.+|.+|++++|.|++++|++|.+++ +||+.+++
T Consensus 314 ~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~-- 385 (413)
T 2x0d_A 314 R-SSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELC----MSFNNRDV-- 385 (413)
T ss_dssp H-CCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHH----HHTC------
T ss_pred h-CCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHH----cCHHHHHH--
Confidence 5 999999999999999999999999999995 467789999999999999999999999998554 57877776
Q ss_pred HHHHHHHHHhCCHHHHHHH
Q 003947 719 QGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 719 ~~a~~~v~~~ytw~~~a~~ 737 (784)
++++++ ++|||+..+++
T Consensus 386 -~~~~~~-~~~~W~~~~~~ 402 (413)
T 2x0d_A 386 -DKKESS-NMMFYINEFNE 402 (413)
T ss_dssp ----CCB-SCGGGCCCC--
T ss_pred -hHHHHH-HhCCHHHHHHH
Confidence 566665 68999999877
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-31 Score=285.74 Aligned_cols=337 Identities=11% Similarity=0.027 Sum_probs=237.2
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~ 333 (784)
.|||++++ . .+||.+..+. .|+++|+++||+|+ ++|...+. .. ...
T Consensus 6 ~mkIl~~~-~------------~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~--------~~-~~~ 51 (364)
T 1f0k_A 6 GKRLMVMA-G------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRM--------EA-DLV 51 (364)
T ss_dssp -CEEEEEC-C------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTST--------HH-HHG
T ss_pred CcEEEEEe-C------------CCccchhHHH--------HHHHHHHHcCCEEE----EEecCCcc--------hh-hhc
Confidence 48999997 1 2378887777 56667799999999 88865211 00 011
Q ss_pred CcCCeEEEEccCCCCcc--cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEE
Q 003947 334 GTKYSDILRVPFRTEEG--IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCT 411 (784)
Q Consensus 334 ~~~~v~IlrvP~~~~~~--~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~ 411 (784)
...++.+.+++.....+ .... + ...+..+ .....+.+.+.+ .+||+||++....++.+.++++..++|+|.
T Consensus 52 ~~~g~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~ 124 (364)
T 1f0k_A 52 PKHGIEIDFIRISGLRGKGIKAL-I--AAPLRIF-NAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVL 124 (364)
T ss_dssp GGGTCEEEECCCCCCTTCCHHHH-H--TCHHHHH-HHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEE
T ss_pred cccCCceEEecCCccCcCccHHH-H--HHHHHHH-HHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEE
Confidence 11357777776542111 0000 0 0011111 112223333333 389999999877667777888889999999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.... + ..+...+.+|.+++++...
T Consensus 125 ~~~~~~~~--------~--------------~~~~~~~~~d~v~~~~~~~------------------------------ 152 (364)
T 1f0k_A 125 HEQNGIAG--------L--------------TNKWLAKIATKVMQAFPGA------------------------------ 152 (364)
T ss_dssp EECSSSCC--------H--------------HHHHHTTTCSEEEESSTTS------------------------------
T ss_pred EecCCCCc--------H--------------HHHHHHHhCCEEEecChhh------------------------------
Confidence 99874210 0 1224567899999877321
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCC-EEEEEecccCCCChHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKP-ILFTMARLDRVKNLTGLVEWY 570 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~-iIl~vGRL~~~Kgi~~LieA~ 570 (784)
++ ++.+|+||+|.+.|.+.... +.+++ +++++ ++++.|++.+.||.+.+++|+
T Consensus 153 -~~-~~~~i~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~il~~~g~~~~~k~~~~li~a~ 206 (364)
T 1f0k_A 153 -FP-NAEVVGNPVRTDVLALPLPQ----------------------QRLAG--REGPVRVLVVGGSQGARILNQTMPQVA 206 (364)
T ss_dssp -SS-SCEECCCCCCHHHHTSCCHH----------------------HHHTT--CCSSEEEEEECTTTCCHHHHHHHHHHH
T ss_pred -cC-CceEeCCccchhhcccchhh----------------------hhccc--CCCCcEEEEEcCchHhHHHHHHHHHHH
Confidence 12 57799999998766543211 22343 34555 455667999999999999999
Q ss_pred HHhHccCCCeE-EEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 571 GKNAKLRELVN-LVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 571 ~~l~~~~~~v~-LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
.++.+ +++ ++++|+++. +.+.++++++++. +|+|+|++ +++..+++. +|++|+||.
T Consensus 207 ~~l~~---~~~~l~i~G~~~~------------~~l~~~~~~~~~~-~v~~~g~~------~~~~~~~~~-ad~~v~~sg 263 (364)
T 1f0k_A 207 AKLGD---SVTIWHQSGKGSQ------------QSVEQAYAEAGQP-QHKVTEFI------DDMAAAYAW-ADVVVCRSG 263 (364)
T ss_dssp HHHGG---GEEEEEECCTTCH------------HHHHHHHHHTTCT-TSEEESCC------SCHHHHHHH-CSEEEECCC
T ss_pred HHhcC---CcEEEEEcCCchH------------HHHHHHHhhcCCC-ceEEecch------hhHHHHHHh-CCEEEECCc
Confidence 99865 678 566777731 4567778888874 79999954 368888885 999999983
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccc--------cccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 003947 650 YEAFGLTVVEAMTCGLPTFATCNGGPA--------EIIVHGKSGFHIDPYK--GDQATGILVDFFEKCKVDPGHWDEISQ 719 (784)
Q Consensus 650 ~E~fGltvlEAMA~GlPVIaT~~GG~~--------EiI~dg~~G~li~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~ 719 (784)
|++++|||+||+|||+|+.||.. +++.+| .|++++++| +++++++|. ++ ||+.+++|++
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~----~l--~~~~~~~~~~ 332 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLA----GW--SRETLLTMAE 332 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHH----TC--CHHHHHHHHH
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHH----hc--CHHHHHHHHH
Confidence 99999999999999999999864 466666 599999988 999999996 45 9999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 720 GGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 720 ~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++.+ +.|+|+.++++++++|+.
T Consensus 333 ~~~~~~-~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 333 RARAAS-IPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHTC-CTTHHHHHHHHHHHHHTT
T ss_pred HHHHhh-ccCHHHHHHHHHHHHHHH
Confidence 999987 699999999999999874
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=297.67 Aligned_cols=335 Identities=14% Similarity=0.147 Sum_probs=224.9
Q ss_pred CCceEEEEcCCChhHHHHHHHH-hCCCcEEEEecCCcccCC----CCCcchhh--hcc-----ccccccchhhhhHHHhc
Q 003947 382 CKPDLIIGNYSDGNIVASLLAH-KLDVTQCTIAHALELTKY----PDSDINWK--KLD-----DKYHFSCQFTADLFAMN 449 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar-~~gvp~V~t~H~l~~~k~----~~s~~~~~--~~~-----~~y~~~~~~~~e~~a~~ 449 (784)
.+|||+|+|+|..++.+.++++ ..++|.|+|+|++....+ ...+.++. .+. ....+......|+.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 6799999999999888888875 458999999999853222 11111211 000 00112223456778899
Q ss_pred ccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHh
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 529 (784)
.||.|+|+|+..+..++... +. .+.. +||||+|.+.|.|..........-..++.+.
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll-------------------~r---~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~ 316 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLL-------------------KR---KPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDF 316 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHT-------------------SS---CCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHHh-------------------cC---CCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHH
Confidence 99999999998887544321 11 2232 3999999999999632211111111122221
Q ss_pred hcCchhhhhhhccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhHcc-------CCCeEEEEEeCCCCCCc--------
Q 003947 530 LYSPVENKEHLCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNAKL-------RELVNLVVVGGDRRKES-------- 593 (784)
Q Consensus 530 l~~~~~~~~~~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~-------~~~v~LvIVG~g~~~~s-------- 593 (784)
+.+ .....+++ .++++++|+.+||++ +.||++.+++|+.++... ..-+.|+|+.++.....
T Consensus 317 l~~--~~~~~l~l-~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~ 393 (725)
T 3nb0_A 317 VRG--HFHGCFDF-DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQA 393 (725)
T ss_dssp HHH--HTTTCCCS-CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHH
T ss_pred HHh--hcccCCCC-CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchh
Confidence 100 00011233 124567778899999 789999999999988642 23478888887744210
Q ss_pred -------------------------------------ccHHHHH---------------------------------HHH
Q 003947 594 -------------------------------------KDLEEQA---------------------------------EMK 603 (784)
Q Consensus 594 -------------------------------------~d~ee~~---------------------------------~~~ 603 (784)
.|.++.- .-+
T Consensus 394 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D 473 (725)
T 3nb0_A 394 EVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDAND 473 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCcc
Confidence 0111100 112
Q ss_pred HHHHHHHhcCCCCc------EEEcc-CcCC--cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 604 KMYGLIDTYKLNGQ------FRWIS-SQMN--RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 604 ~l~~li~~l~L~~~------V~flG-~~~~--~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
.+...++++++.++ |.|++ +.++ .+-..++..+++. +|+||+||++|+||++++||||||+|||+|+.||
T Consensus 474 ~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~-advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 474 LILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRG-CHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHH-CSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhh-ceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 23344566777665 67765 2211 1112257888885 9999999999999999999999999999999999
Q ss_pred cccccccC-------ceEEEE---CCCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 675 PAEIIVHG-------KSGFHI---DPYKGDQATGILVDFFEKCK-VDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 675 ~~EiI~dg-------~~G~li---~p~d~e~lAe~I~~~l~~ll-~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+.|+|.++ .+|+++ ++.|+++++++|.+++..+. .++..+.+|+++|++.+ ++|+|+.++++|+++|+
T Consensus 553 ~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye 631 (725)
T 3nb0_A 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKARQ 631 (725)
T ss_dssp HHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHH
T ss_pred hhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Confidence 99999876 369988 35688888888888876655 47888999999998776 79999999999999998
Q ss_pred H
Q 003947 744 V 744 (784)
Q Consensus 744 ~ 744 (784)
.
T Consensus 632 ~ 632 (725)
T 3nb0_A 632 L 632 (725)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=298.33 Aligned_cols=245 Identities=13% Similarity=0.068 Sum_probs=182.9
Q ss_pred CceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhH
Q 003947 383 KPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEI 462 (784)
Q Consensus 383 ~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 462 (784)
+|||||.+....... ..+++..++|++.+.|+..... ... .... ....++..++.||.||++|+..+
T Consensus 124 ~~DvIh~~~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~---------~~~-~~~~--~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVAF-IELAKRVNPAAKLVYRASDGLS---------TIN-VASY--IEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGGG-HHHHHHHCTTSEEEEEESSCHH---------HHT-CCHH--HHHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHHH-HHHHHHhCCCEEEEEeccchhh---------ccc-ccHH--HHHHHHHHHHhCCEEEEcCHHHH
Confidence 699999443322221 2456678999999999743200 000 0001 11235567899999999998766
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhcc
Q 003947 463 AGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCV 542 (784)
Q Consensus 463 ~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gl 542 (784)
+...+ .. ++.+||||+|.+.|.+....
T Consensus 191 ~~~~~-------------------------~~-~i~vipngvd~~~f~~~~~~--------------------------- 217 (406)
T 2hy7_A 191 AEVVS-------------------------RD-NVFHVGHGVDHNLDQLGDPS--------------------------- 217 (406)
T ss_dssp GGCSC-------------------------ST-TEEECCCCBCTTHHHHHCSC---------------------------
T ss_pred HHHHh-------------------------cC-CEEEEcCCcChHhcCccccc---------------------------
Confidence 52110 02 89999999998766432100
Q ss_pred ccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 543 l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
..+++++|+|+||+.+.||+ +..+.+..++++|+|+|+|+ ++++++.++|+|+|
T Consensus 218 -~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~-------------------~~~~~l~~~V~f~G 271 (406)
T 2hy7_A 218 -PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM-------------------GRHPGYGDNVIVYG 271 (406)
T ss_dssp -SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS-------------------CCCTTCCTTEEEEC
T ss_pred -ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch-------------------HHhcCCCCCEEEcC
Confidence 02234889999999999998 33344456899999999883 45678889999999
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHH-------HcCCcEEEcCccccccccccCceEEE-ECCCCHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM-------TCGLPTFATCNGGPAEIIVHGKSGFH-IDPYKGD 694 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM-------A~GlPVIaT~~GG~~EiI~dg~~G~l-i~p~d~e 694 (784)
.++.+++..+++. +|++|+||..|+||++++||| |||+|||+|+. +.++.+|++ ++|+|++
T Consensus 272 ----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~ 340 (406)
T 2hy7_A 272 ----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNAD 340 (406)
T ss_dssp ----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHH
T ss_pred ----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHH
Confidence 7778999999995 999999999999999999999 99999999987 677889999 9999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--HHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL--SGV 744 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l--y~~ 744 (784)
++|++|.+++ +|++ + .+.++|||+.++++++++ |..
T Consensus 341 ~la~ai~~ll----~~~~---------~-~~~~~~sw~~~a~~~~~~~~y~~ 378 (406)
T 2hy7_A 341 SVIAAITQAL----EAPR---------V-RYRQCLNWSDTTDRVLDPRAYPE 378 (406)
T ss_dssp HHHHHHHHHH----HCCC---------C-CCSCCCBHHHHHHHHHCGGGSGG
T ss_pred HHHHHHHHHH----hCcc---------h-hhhhcCCHHHHHHHHHHhhcccc
Confidence 9999998655 4655 1 234789999999999998 664
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=282.45 Aligned_cols=173 Identities=9% Similarity=0.059 Sum_probs=153.2
Q ss_pred hhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEe-CCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 537 KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG-~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
++.+|+ ++ .++++++||+.+ ||++.+++++.++.+..|+++|+|+| +|+ ..+.+++.++++|+.
T Consensus 368 r~~~~~--~~-~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~-----------~~~~l~~~~~~~~l~ 432 (568)
T 2vsy_A 368 RTQCGL--PE-QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE-----------ADARLRAFAHAQGVD 432 (568)
T ss_dssp TGGGTC--CT-TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT-----------HHHHHHHHHHHTTCC
T ss_pred ccccCC--CC-CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH-----------HHHHHHHHHHHcCCC
Confidence 455776 33 445669999999 99999999999998888999999999 663 246788899999998
Q ss_pred -CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE-------cCcc-------ccccccc
Q 003947 616 -GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA-------TCNG-------GPAEIIV 680 (784)
Q Consensus 616 -~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIa-------T~~G-------G~~EiI~ 680 (784)
++|+|+| .++.+++..+++. +|+||+||.+ +||++++|||+||+|||+ |+.| |+.|+|.
T Consensus 433 ~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~ 506 (568)
T 2vsy_A 433 AQRLVFMP----KLPHPQYLARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV 506 (568)
T ss_dssp GGGEEEEC----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC
T ss_pred hhHEEeeC----CCCHHHHHHHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc
Confidence 9999999 6777899999995 9999999999 999999999999999999 9999 9999985
Q ss_pred cCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHH
Q 003947 681 HGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRI--QEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 681 dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v--~~~ytw~~~a~~ll~ly~~ 744 (784)
+ |+++++++|.++ ++||+.+++|++++++++ .+.|||+.++++++++|+.
T Consensus 507 ~----------~~~~la~~i~~l----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 507 A----------DDAAFVAKAVAL----ASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp S----------SHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred C----------CHHHHHHHHHHH----hcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 5 889999999754 469999999999999998 6889999999999999974
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=277.24 Aligned_cols=316 Identities=13% Similarity=0.037 Sum_probs=211.8
Q ss_pred CCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+|+||+|++...+++..+++.. ++|++++.|...+ .+.. +..+ .....-...+..+|.+...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp----~~~~-~~~l-------p~~~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFP----TPEI-FNAL-------PTYDTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCC----CHHH-HTTS-------TTHHHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCC----CHHH-HhhC-------ccHHHHHHhhhccCeEEEECHH
Confidence 367999999987767777766654 7999999998532 1111 1110 0000112235567887777654
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
............-.... ...+. ....| . ..++.+||||||.+.|.+...... .. . ....++++
T Consensus 190 ~~~~f~~~~~~~l~~~~-~~~~~-~~~~g-~--~~~v~vip~GID~~~f~~~~~~~~-~~---~--------~~~lr~~~ 252 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRVTT-RSAKS-HTAWG-K--AFRTEVYPIGIEPKEIAKQAAGPL-PP---K--------LAQLKAEL 252 (482)
T ss_dssp HHHHHHHHHHHHSCEEE-ETTTE-EEETT-E--EEEEEECCCCCCHHHHHHHHHSCC-CH---H--------HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCcc-ccCCe-EEECC-e--EEEEEEEeccCCHHHHHHHhcCcc-hH---H--------HHHHHHHh
Confidence 43321111000000000 00010 11112 1 357899999999987754211000 00 0 00122333
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC---
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK--- 613 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~--- 613 (784)
+ ++++|+++||+++.||++.+++|++++.+.+| ++.|++||+.... ...+..+..+.+.+++.+++
T Consensus 253 ~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~--~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 253 K-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG--DVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp T-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST--TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc--chHHHHHHHHHHHHHHHHHhhhc
Confidence 3 57899999999999999999999999877665 4789999974321 11233334455666665543
Q ss_pred -CC--CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCccccccccccCceE
Q 003947 614 -LN--GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCNGGPAEIIVHGKSG 685 (784)
Q Consensus 614 -L~--~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-----PVIaT~~GG~~EiI~dg~~G 685 (784)
.. ..|++++ +.++.+++..+|+. +|+||+||..||||++++||||||+ |+|+|+.+|..+.+. +|
T Consensus 326 g~~~~~~v~~~~---g~v~~~el~~ly~~-ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g 398 (482)
T 1uqt_A 326 GQLGWTPLYYLN---QHFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SA 398 (482)
T ss_dssp CBTTBCSEEEEC---SCCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TS
T ss_pred ccCCCceEEEeC---CCCCHHHHHHHHHH-ccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---Ce
Confidence 22 2367543 27788999999995 9999999999999999999999997 999999888888882 79
Q ss_pred EEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 686 FHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 686 ~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++|.|++++|++|.+++ ..+++.++++++++++++ ++|||+.+++++++.|+.
T Consensus 399 ~lv~p~d~~~lA~ai~~lL---~~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 399 LIVNPYDRDEVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQ 453 (482)
T ss_dssp EEECTTCHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHh
Confidence 9999999999999998654 236788999999999998 669999999999999875
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=271.32 Aligned_cols=275 Identities=13% Similarity=0.102 Sum_probs=196.8
Q ss_pred CceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 383 KPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 383 ~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
+||+||+|... .++.+.++++..++|++.+.|+... + . .+..+ . .........+.+|.++++|+..
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~---~-~~~~~------~-~~~~~~~~~~~~d~ii~~s~~~ 161 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--W---D-KYSPY------P-EEMNRQLTGVMADLHFSPTAKS 161 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--S---C-TTSST------T-HHHHHHHHHHHCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--c---c-ccCCC------h-hHhhhhHHhhhhheeeCCCHHH
Confidence 89999998753 4566677888899999987776521 0 0 01000 0 0011222344599999999887
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.+... ..|++ ..++.+|+|| +|...+.+..... .+.++.+
T Consensus 162 ~~~~~--------------------~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~-----------------~~~~~~~ 202 (375)
T 3beo_A 162 ATNLQ--------------------KENKD--ESRIFITGNTAIDALKTTVKETYS-----------------HPVLEKL 202 (375)
T ss_dssp HHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHCCSSCC-----------------CHHHHTT
T ss_pred HHHHH--------------------HcCCC--cccEEEECChhHhhhhhhhhhhhh-----------------HHHHHhc
Confidence 65211 12443 5689999999 7865543321000 0011111
Q ss_pred ccccCCCCCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 541 CVLKDSSKPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
++++.+++++||+.+. ||++.+++|+.++.+..+++++++ |+++. . ...+.+++++ +..++|.
T Consensus 203 ----~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~-----~---~~~~~~~~~~---~~~~~v~ 266 (375)
T 3beo_A 203 ----GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN-----P---VVRETANDIL---GDYGRIH 266 (375)
T ss_dssp ----TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC-----H---HHHHHHHHHH---TTCTTEE
T ss_pred ----cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC-----H---HHHHHHHHHh---hccCCEE
Confidence 2344577899999876 999999999999987778899654 65543 1 1122223322 3346899
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGPAEIIVHGKSGFHIDPYKGDQATG 698 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~~EiI~dg~~G~li~p~d~e~lAe 698 (784)
|+| .++..++..+++. +|++|+|| |.+++|||+||+|||+|+ .||..|++.+| +|+++++ |++++++
T Consensus 267 ~~g----~~~~~~~~~~~~~-ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~ 334 (375)
T 3beo_A 267 LIE----PLDVIDFHNVAAR-SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFS 334 (375)
T ss_dssp EEC----CCCHHHHHHHHHT-CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHH
T ss_pred EeC----CCCHHHHHHHHHh-CcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHH
Confidence 998 5666799999995 99999998 778999999999999996 59999999988 9999987 9999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
+|.++ ++||+.+++|+++++++. +.|+|+.+++.+.+++
T Consensus 335 ~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 335 LADEL----LSDKEAHDKMSKASNPYG-DGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHH----HHCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHT
T ss_pred HHHHH----HhChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHh
Confidence 99854 469999999999998876 7899999999998875
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=268.02 Aligned_cols=285 Identities=12% Similarity=0.077 Sum_probs=200.1
Q ss_pred CceEEEEcCC-ChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 383 KPDLIIGNYS-DGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 383 ~pDIIh~~~~-~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
+||+||+|.. ..++.+.++++..++|++.+.|++.... .|..+. .........+.+|.++++|+..
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~~-------~~~~~~~~~~~~d~ii~~s~~~ 152 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPWP-------EEANRTLTGHLAMYHFSPTETS 152 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSSTT-------HHHHHHHHHTTCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCCc-------hHhhHHHHHhhccEEEcCcHHH
Confidence 8999999976 4466667788889999999988763211 010000 0011112345699999999877
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCC-CCCCCCCCcHHH-HhhhcchhhhHHhhcCchhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGA-DMTIYFPYMEEK-RRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~-~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
.+... ..|++ ..++.+++||+ |...+.+..... ... ..+.++.
T Consensus 153 ~~~l~--------------------~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~~~-------------~~~~~~~ 197 (384)
T 1vgv_A 153 RQNLL--------------------RENVA--DSRIFITGNTVIDALLWVRDQVMSSDKL-------------RSELAAN 197 (384)
T ss_dssp HHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHHHHTTTCHHH-------------HHHHHTT
T ss_pred HHHHH--------------------HcCCC--hhhEEEeCChHHHHHHhhhhccccchhh-------------hHHHHHh
Confidence 65211 12443 56899999995 432111100000 000 0012234
Q ss_pred hc-cccCCC-CCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 540 LC-VLKDSS-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 540 ~g-ll~~~~-k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
+| + +++ +.+++++||+.+. ||++.+++|+.++.+..++++|+++++.. . ...+.+++++. ..+
T Consensus 198 ~~~~--~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~---~~~~~l~~~~~---~~~ 263 (384)
T 1vgv_A 198 YPFI--DPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN------P---NVREPVNRILG---HVK 263 (384)
T ss_dssp CTTC--CTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC------H---HHHHHHHHHHT---TCT
T ss_pred cccc--CCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC------H---HHHHHHHHHhh---cCC
Confidence 45 4 233 3578899999876 99999999999998877899999864421 0 12233444432 246
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHGKSGFHIDPYKGDQ 695 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg~~G~li~p~d~e~ 695 (784)
+|+|+| .++.+++..+|+. +|++|.|| |.+++|||+||+|||+|+. ||..|++.+| +|+++++ |+++
T Consensus 264 ~v~~~g----~~~~~~~~~~~~~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~ 331 (384)
T 1vgv_A 264 NVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQR 331 (384)
T ss_dssp TEEEEC----CCCHHHHHHHHHH-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHH
T ss_pred CEEEeC----CCCHHHHHHHHHh-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHH
Confidence 899988 5556799999995 99999999 4458999999999999986 9999999888 9999988 9999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003947 696 ATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYG 746 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~ 746 (784)
++++|.++ ++||+.+++|+++++++. +.|+|+.+++.++++|...|
T Consensus 332 la~~i~~l----l~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 332 IVEEVTRL----LKDENEYQAMSRAHNPYG-DGQACSRILEALKNNRISLG 377 (384)
T ss_dssp HHHHHHHH----HHCHHHHHHHHSSCCTTC-CSCHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHH----HhChHHHhhhhhccCCCc-CCCHHHHHHHHHHHHHHhhc
Confidence 99999854 469999999999998876 78999999999999876544
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-27 Score=233.86 Aligned_cols=190 Identities=14% Similarity=0.197 Sum_probs=160.1
Q ss_pred ecCCCCCCCCC--CCcH--HHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhH
Q 003947 500 VSPGADMTIYF--PYME--EKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNA 574 (784)
Q Consensus 500 IpnGvD~~~f~--p~~~--~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~ 574 (784)
||||+|.+.|. |... .+.+ ...++++|+ +++++|+++||+. +.||++.+++++..+.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~---------------~~~r~~~~~---~~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERK---------------KSLLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHH---------------HHHHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCccChhhccccccccchhhHH---------------HHHHHHcCC---CCCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 79999999998 7642 0000 122355675 3556999999999 9999999999999997
Q ss_pred --ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE-ccCcCCcCChhHHHHHHHccccEEEeCCCCC
Q 003947 575 --KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW-ISSQMNRVRNGELYRYICDTKGAFVQPALYE 651 (784)
Q Consensus 575 --~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~~~v~~~el~~~la~aadvfV~PS~~E 651 (784)
+..++++|+|+|+++. +..+.+++++++++ +|+| +| .++.+++..+++. +|++|+||..|
T Consensus 64 ~~~~~~~~~l~i~G~~~~---------~~~~~l~~~~~~~~---~v~~~~g----~~~~~~~~~~~~~-ad~~l~ps~~e 126 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDP---------ELEGWARSLEEKHG---NVKVITE----MLSREFVRELYGS-VDFVIIPSYFE 126 (200)
T ss_dssp TSGGGGGEEEEEECCBCH---------HHHHHHHHHHHHCT---TEEEECS----CCCHHHHHHHHTT-CSEEEECCSCC
T ss_pred hhccCCCeEEEEECCCCh---------HHHHHHHHHHHhcC---CEEEEec----cCCHHHHHHHHHH-CCEEEECCCCC
Confidence 6678999999999852 23467788888887 8999 99 7778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCC
Q 003947 652 AFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKV-DPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~-dp~~~~~m~~~a~~~v~~~yt 730 (784)
+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.++ ++ |++.+++|++++++++.+ ||
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKA----LELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred CccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999999999999999999999 99999999999999999999854 46 999999999999999977 86
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.7e-25 Score=250.05 Aligned_cols=327 Identities=13% Similarity=0.047 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHcC-CCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccch--hh
Q 003947 367 TFTEDVATEIIQELQ-CKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQ--FT 442 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~-~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~--~~ 442 (784)
......+..+....+ ..-|+|..|+....+++..+.++ .+.++.+-.|..+ +.+.+ ++.+.. ..
T Consensus 132 ~vN~~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPf----Ps~e~--------f~~Lp~~~r~ 199 (496)
T 3t5t_A 132 RFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPW----PSADY--------WRILPKEIRT 199 (496)
T ss_dssp HHHHHHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCC----CCHHH--------HTTSCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCC----CCHHH--------HhhCcHhHHH
Confidence 344445555555443 35789999999987777777654 5688999999753 22221 111111 11
Q ss_pred hhHHHhcccCEEEecChHhHhhccccccccc-cccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhc
Q 003947 443 ADLFAMNRTDFIITSTFQEIAGSKDTVGQYE-SHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKH 521 (784)
Q Consensus 443 ~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe-~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~ 521 (784)
.-+..|..||.|.+.|+..+....+.....- ....-...+ .....|. ..++.++|+|||.+.|.+..... +
T Consensus 200 ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~-~v~~~gr---~v~v~viP~GID~~~f~~~~~~~-~--- 271 (496)
T 3t5t_A 200 GILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAM-TVEWRGH---RTRLRTMPLGYSPLTLDGRNPQL-P--- 271 (496)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTT-EEEETTE---EEEEEECCCCBCGGGC----CCC-C---
T ss_pred HHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCC-eEEECCE---EEEEEEeccEeCHHHhchhhHHH-H---
Confidence 1234788999999999877653222111000 000000000 0011111 23788999999999997753200 0
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC---eEEEEEeCCCCCCcccHHH
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL---VNLVVVGGDRRKESKDLEE 598 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~---v~LvIVG~g~~~~s~d~ee 598 (784)
...++++| ++++|+++||+++.||++.+++|+ ++.+.+|+ +.|++||.... +...++
T Consensus 272 ------------~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr--~~~~~y 331 (496)
T 3t5t_A 272 ------------EGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR--LYVPAN 331 (496)
T ss_dssp ------------TTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC--TTSHHH
T ss_pred ------------HHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC--CCchHH
Confidence 12223333 578999999999999999999999 88776665 67888885432 112344
Q ss_pred HHHHHHHHHHHHhcCCC---CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC---CcEEEcCc
Q 003947 599 QAEMKKMYGLIDTYKLN---GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG---LPTFATCN 672 (784)
Q Consensus 599 ~~~~~~l~~li~~l~L~---~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~G---lPVIaT~~ 672 (784)
.+..+++.+++.+.+.. ..|+|+| .++.+++..+|+. ||+||+||..||||++++|||||| .|+|+|..
T Consensus 332 ~~l~~~l~~lv~~in~~~g~~~V~f~g----~v~~~el~aly~~-ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~ 406 (496)
T 3t5t_A 332 ADYVHRVETAVAEANAELGSDTVRIDN----DNDVNHTIACFRR-ADLLIFNSTVDGQNLSTFEAPLVNERDADVILSET 406 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEE----CCCHHHHHHHHHH-CSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETT
T ss_pred HHHHHHHHHHHHHhccccCCcCEEEeC----CCCHHHHHHHHHh-ccEEEECcccccCChhHHHHHHhCCCCCCEEEeCC
Confidence 44556666666655321 1699998 6788999999994 999999999999999999999997 89999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 673 GGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 673 GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+|..+.+ +.+|++++|.|++++|++|.++++ .+++.++++.++.++++ .++|+...++.+++-...
T Consensus 407 aGa~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 407 CGAAEVL--GEYCRSVNPFDLVEQAEAISAALA---AGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp BTTHHHH--GGGSEEECTTBHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHHHH
T ss_pred CCCHHHh--CCCEEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHhh
Confidence 9999888 347999999999999999997653 57788999999999998 889999999999877653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=216.54 Aligned_cols=163 Identities=15% Similarity=0.176 Sum_probs=139.9
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+++|+++||+.+.||++.+++|+.++++ .++++|+|+|+|+. .+.++++++++++ +|.| | .
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~--~v~~-g----~ 62 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQDIVLLLKGKGPD-----------EKKIKLLAQKLGV--KAEF-G----F 62 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT-GGGEEEEEECCSTT-----------HHHHHHHHHHHTC--EEEC-C----C
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc-CCCeEEEEEeCCcc-----------HHHHHHHHHHcCC--eEEE-e----e
Confidence 5789999999999999999999999853 48999999999864 3667888888887 8898 9 6
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-cEEE-cCccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFA-TCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-PVIa-T~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
++.+++..+++. +|++|+||.+|+||++++|||+||+ |||+ ++.||..+++.++.+ +++++|+++++++|.+++
T Consensus 63 ~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~- 138 (166)
T 3qhp_A 63 VNSNELLEILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL- 138 (166)
T ss_dssp CCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH-
Confidence 778999999995 9999999999999999999999998 9999 578899999988755 788999999999998554
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003947 706 KCKVDPGHWDEISQGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 706 ~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ 737 (784)
+|++.+++|++++++++ ++|||+.++++
T Consensus 139 ---~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 139 ---ENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp ---HCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred ---hCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 69999999999999998 99999998864
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-24 Score=232.31 Aligned_cols=270 Identities=11% Similarity=0.037 Sum_probs=181.2
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|.... ++.+.++++..++|++++.|+... +. .+..+ . .........+.+|.++++|+
T Consensus 89 ~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--~~----~~~~~------~-~~~~~~~~~~~~~~~~~~s~ 155 (376)
T 1v4v_A 89 EMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--GN----LKEPF------P-EEANRRLTDVLTDLDFAPTP 155 (376)
T ss_dssp HTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--SC----TTSST------T-HHHHHHHHHHHCSEEEESSH
T ss_pred HcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc--cc----ccCCC------c-hHHHHHHHHHHhceeeCCCH
Confidence 34899999987644 455677888899998754443311 00 00000 0 00112334567999999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCC-CCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGA-DMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
...+... ..|++ ..|+.+++|++ |...+.+ .+ . ..++
T Consensus 156 ~~~~~l~--------------------~~g~~--~~ki~vi~n~~~d~~~~~~-----~~-~--------------~~~~ 193 (376)
T 1v4v_A 156 LAKANLL--------------------KEGKR--EEGILVTGQTGVDAVLLAA-----KL-G--------------RLPE 193 (376)
T ss_dssp HHHHHHH--------------------TTTCC--GGGEEECCCHHHHHHHHHH-----HH-C--------------CCCT
T ss_pred HHHHHHH--------------------HcCCC--cceEEEECCchHHHHhhhh-----hh-h--------------HHHH
Confidence 7665211 12444 56899999964 4211100 00 0 0111
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEE-eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIV-G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
.+ ++++++++++||+...||++.+++|+.++.+..++++++++ |+++ ...+.+++++. ..++
T Consensus 194 ~~----~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~----------~~~~~l~~~~~---~~~~ 256 (376)
T 1v4v_A 194 GL----PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAVFPVLK---GVRN 256 (376)
T ss_dssp TC----CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHHHHHHT---TCTT
T ss_pred hc----CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH----------HHHHHHHHHhc---cCCC
Confidence 11 23445678899998888999999999999877788999887 5441 12344444443 2468
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQA 696 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~l 696 (784)
|+|+| .+...++..+|+. +|++|.|| + |+ ++|||+||+|||++ +.||..+++.+| +|++++ .|++++
T Consensus 257 v~~~g----~~g~~~~~~~~~~-ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~l 324 (376)
T 1v4v_A 257 FVLLD----PLEYGSMAALMRA-SLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGV 324 (376)
T ss_dssp EEEEC----CCCHHHHHHHHHT-EEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHH
T ss_pred EEEEC----CCCHHHHHHHHHh-CcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHH
Confidence 99997 4555688999995 99999998 3 44 88999999999997 678999988766 899986 499999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++|.+ +++||+.+++|++++ +.|.|...++++.+++.
T Consensus 325 a~~i~~----ll~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~ 362 (376)
T 1v4v_A 325 YRVVKG----LLENPEELSRMRKAK-----NPYGDGKAGLMVARGVA 362 (376)
T ss_dssp HHHHHH----HHTCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHH
T ss_pred HHHHHH----HHhChHhhhhhcccC-----CCCCCChHHHHHHHHHH
Confidence 999974 557999999998643 45666666666666554
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-23 Score=203.40 Aligned_cols=151 Identities=19% Similarity=0.237 Sum_probs=132.2
Q ss_pred CCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH--hcCCCCcEEEcc
Q 003947 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID--TYKLNGQFRWIS 622 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~--~l~L~~~V~flG 622 (784)
+.++++|+|+||+.+.||++.+++++.++ ++++|+|+|+++.. +.++++++ ++++.++|+|+|
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~-----------~~l~~~~~~~~~~l~~~v~~~g 84 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKG-----------DHAERYARKIMKIAPDNVKFLG 84 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTT-----------STHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccH-----------HHHHHHHHhhhcccCCcEEEeC
Confidence 56789999999999999999999999987 57999999998652 34667777 778899999999
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
.++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ +.|+++++++|.+
T Consensus 85 ----~~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~ 158 (177)
T 2f9f_A 85 ----SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMKK 158 (177)
T ss_dssp ----SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHHH
Confidence 7778899999995 999999999999999999999999999999999999999999999999 9999999999985
Q ss_pred HHHHhcCCHHH-HHHHHHH
Q 003947 703 FFEKCKVDPGH-WDEISQG 720 (784)
Q Consensus 703 ~l~~ll~dp~~-~~~m~~~ 720 (784)
++ +|++. +++++++
T Consensus 159 l~----~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 159 VS----KNPDKFKKDCFRR 173 (177)
T ss_dssp HH----HCTTTTHHHHHHH
T ss_pred HH----hCHHHHHHHHHHH
Confidence 54 57764 4444433
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=225.22 Aligned_cols=206 Identities=10% Similarity=0.048 Sum_probs=157.5
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhh
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSE 525 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~ 525 (784)
..++.+|.|++.|+..++...+ .|+ + ++.+++||. |.+.... +
T Consensus 149 ~~~~~~d~ii~~S~~~~~~l~~--------------------~g~---~-ki~vi~n~~----f~~~~~~--~------- 191 (374)
T 2xci_A 149 ILSKKFDLIIMRTQEDVEKFKT--------------------FGA---K-RVFSCGNLK----FICQKGK--G------- 191 (374)
T ss_dssp HHHTTCSEEEESCHHHHHHHHT--------------------TTC---C-SEEECCCGG----GCCCCCS--C-------
T ss_pred HHHHhCCEEEECCHHHHHHHHH--------------------cCC---C-eEEEcCCCc----cCCCcCh--h-------
Confidence 4678999999999887763221 233 3 899999973 2221100 0
Q ss_pred hHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHH
Q 003947 526 IEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKM 605 (784)
Q Consensus 526 ~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l 605 (784)
+ .-.++++++.|+ ..||++.+++|++++.+..|+++|+|+|+|+. ..+++
T Consensus 192 ------------~------~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~----------~~~~l 241 (374)
T 2xci_A 192 ------------I------KLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE----------NAKIF 241 (374)
T ss_dssp ------------C------CCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG----------GHHHH
T ss_pred ------------h------hhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH----------HHHHH
Confidence 0 012267776665 46899999999999988889999999998853 12457
Q ss_pred HHHHHhcCCC--------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEc-Ccccc
Q 003947 606 YGLIDTYKLN--------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFAT-CNGGP 675 (784)
Q Consensus 606 ~~li~~l~L~--------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT-~~GG~ 675 (784)
+++++++++. ++|.+.|.+ +++..+|+. +|++++||. .|++|++++||||||+|||++ +.+|+
T Consensus 242 ~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~~-aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~ 314 (374)
T 2xci_A 242 EKKARDFGFKTSFFENLEGDVILVDRF------GILKELYPV-GKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKV 314 (374)
T ss_dssp HHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGGG-EEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTS
T ss_pred HHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHHh-CCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccCh
Confidence 7888888886 568887732 478899995 999888765 577899999999999999985 78999
Q ss_pred ccccccC-ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 676 AEIIVHG-KSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 676 ~EiI~dg-~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
.|++.+. .+|++++++|+++++++|.+++ +| +.+++|+++|++++++++.
T Consensus 315 ~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 315 NDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp HHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHhccc
Confidence 9988763 5788888999999999998554 58 8899999999999977554
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-19 Score=195.02 Aligned_cols=162 Identities=13% Similarity=0.064 Sum_probs=125.5
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+++.++++.|++. .|+.+.+.+++..+.+. ++++++++++... . +.+ -++.++|++.|
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~----~------~~l------~~~~~~v~~~~--- 298 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLD----V------SGL------GEVPANVRLES--- 298 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCC----C------TTC------CCCCTTEEEES---
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCC----h------hhh------ccCCCcEEEeC---
Confidence 3455678889986 78888888888887663 5677777765430 0 001 03568999999
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHGKSGFHIDPY--KGDQATGI 699 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg~~G~li~p~--d~e~lAe~ 699 (784)
+++ +..+++ .+|++|.++ .+.+++|||+||+|+|++..+ +..+.+.++..|++++++ |+++++++
T Consensus 299 -~~~---~~~~l~-~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~a 369 (412)
T 3otg_A 299 -WVP---QAALLP-HVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGA 369 (412)
T ss_dssp -CCC---HHHHGG-GCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHH
T ss_pred -CCC---HHHHHh-cCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHH
Confidence 443 566777 499999875 248999999999999996554 477888888899999987 89999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|.++ ++||+.+++|++.+++.. +.++|+.+++.+++++.
T Consensus 370 i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 370 AKRL----LAEESYRAGARAVAAEIA-AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHH----HHCHHHHHHHHHHHHHHH-HSCCHHHHHTTHHHHHC
T ss_pred HHHH----HhCHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHhc
Confidence 9754 579999999999998876 78899999999999875
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=196.09 Aligned_cols=247 Identities=12% Similarity=0.076 Sum_probs=173.6
Q ss_pred CCCceEEEEcCCCh---hHHHHHHHH--hCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEE
Q 003947 381 QCKPDLIIGNYSDG---NIVASLLAH--KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFII 455 (784)
Q Consensus 381 ~~~pDIIh~~~~~~---~lva~llar--~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 455 (784)
-.++|+|+.+++.. .+.+.++.+ +.++|+|+.+|++++..+. ...+ .. ..|+..+++||.||
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~---------~~~~--~~--~~E~~~y~~aD~Ii 138 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS---------GNFY--LM--DRTIAYYNKADVVV 138 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG---------GGGG--GH--HHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc---------cchh--hH--HHHHHHHHHCCEEE
Confidence 45899999988764 233445554 3489999999999764321 0111 11 25788999999999
Q ss_pred ecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 456 TSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 456 t~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
+.|+...+.+. ..|++ ..++.++++. |... +..
T Consensus 139 ~~S~~~~~~l~--------------------~~G~~--~~ki~~~~~~-~~~~--~~~---------------------- 171 (339)
T 3rhz_A 139 APSQKMIDKLR--------------------DFGMN--VSKTVVQGMW-DHPT--QAP---------------------- 171 (339)
T ss_dssp ESCHHHHHHHH--------------------HTTCC--CSEEEECCSC-CCCC--CCC----------------------
T ss_pred ECCHHHHHHHH--------------------HcCCC--cCceeecCCC-CccC--ccc----------------------
Confidence 99998876322 23443 4566444432 2110 100
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
.. .+.++++|+|+|++++...+. +..++++|+|+|+|+.. .+.
T Consensus 172 ----~~--~~~~~~~i~yaG~l~k~~~L~----------~l~~~~~f~ivG~G~~~---------------------~l~ 214 (339)
T 3rhz_A 172 ----MF--PAGLKREIHFPGNPERFSFVK----------EWKYDIPLKVYTWQNVE---------------------LPQ 214 (339)
T ss_dssp ----CC--CCEEEEEEEECSCTTTCGGGG----------GCCCSSCEEEEESCCCC---------------------CCT
T ss_pred ----cc--ccCCCcEEEEeCCcchhhHHH----------hCCCCCeEEEEeCCccc---------------------CcC
Confidence 00 023568899999999633322 22478999999999751 244
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li 688 (784)
+|.|+| +++.+++..+++. +|+.+++.. ...+|.+++||||||+|||+++.|+..++|.++.+|+.+
T Consensus 215 -nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~ 288 (339)
T 3rhz_A 215 -NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV 288 (339)
T ss_dssp -TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE
T ss_pred -CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe
Confidence 899999 7889999999975 666666511 135699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
+ +.++++++|.. + +++.+++|+++|++.. ++++|..++++.+
T Consensus 289 ~--~~~e~~~~i~~----l--~~~~~~~m~~na~~~a-~~~~~~~f~k~~l 330 (339)
T 3rhz_A 289 K--DVEEAIMKVKN----V--NEDEYIELVKNVRSFN-PILRKGFFTRRLL 330 (339)
T ss_dssp S--SHHHHHHHHHH----C--CHHHHHHHHHHHHHHT-HHHHTTHHHHHHH
T ss_pred C--CHHHHHHHHHH----h--CHHHHHHHHHHHHHHH-HHhhccHHHHHHH
Confidence 6 57888888863 2 5778999999999876 5666666665554
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=183.86 Aligned_cols=345 Identities=13% Similarity=0.031 Sum_probs=202.1
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
|..||+|.+ ..|||-..-.+ .++++|+++||+|. .+|... | .+.+ .
T Consensus 1 M~~~i~i~~-------------GGTgGHi~pal--------ala~~L~~~g~~V~----~vg~~~----g----~e~~-~ 46 (365)
T 3s2u_A 1 MKGNVLIMA-------------GGTGGHVFPAL--------ACAREFQARGYAVH----WLGTPR----G----IEND-L 46 (365)
T ss_dssp --CEEEEEC-------------CSSHHHHHHHH--------HHHHHHHHTTCEEE----EEECSS----S----THHH-H
T ss_pred CCCcEEEEc-------------CCCHHHHHHHH--------HHHHHHHhCCCEEE----EEECCc----h----Hhhc-h
Confidence 566888763 13678554444 67788899999998 777431 1 0000 1
Q ss_pred cCcCCeEEEEccCCCCcc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEE
Q 003947 333 YGTKYSDILRVPFRTEEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~ 411 (784)
....|+.+..+|..+..+ ...+++ ...+..+..+ ..+.+.+.+ .+||+|++.....+..+.++++.+++|++.
T Consensus 47 v~~~g~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~~---~~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 47 VPKAGLPLHLIQVSGLRGKGLKSLV--KAPLELLKSL-FQALRVIRQ---LRPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp TGGGTCCEEECC----------------CHHHHHHHH-HHHHHHHHH---HCCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred hhhcCCcEEEEECCCcCCCCHHHHH--HHHHHHHHHH-HHHHHHHHh---cCCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 111245555665433221 000000 0112222211 122333333 389999998888888888899999999884
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
.-.+.. + . ...++..+.|+.|.+..+....
T Consensus 121 he~n~~----~--G----------------~~nr~l~~~a~~v~~~~~~~~~---------------------------- 150 (365)
T 3s2u_A 121 HEQNAV----A--G----------------TANRSLAPIARRVCEAFPDTFP---------------------------- 150 (365)
T ss_dssp EECSSS----C--C----------------HHHHHHGGGCSEEEESSTTSSC----------------------------
T ss_pred Eecchh----h--h----------------hHHHhhccccceeeeccccccc----------------------------
Confidence 322211 0 0 0122345678887665532100
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCE-EEEEecccCCCChHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI-LFTMARLDRVKNLTGLVEWY 570 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~i-Il~vGRL~~~Kgi~~LieA~ 570 (784)
...|..++.|.+..+.+.+.. ...++ +++++. +++.|+++..+..+.+.+++
T Consensus 151 -~~~k~~~~g~pvr~~~~~~~~------------------------~~~~~--~~~~~~ilv~gGs~g~~~~~~~~~~al 203 (365)
T 3s2u_A 151 -ASDKRLTTGNPVRGELFLDAH------------------------ARAPL--TGRRVNLLVLGGSLGAEPLNKLLPEAL 203 (365)
T ss_dssp -C---CEECCCCCCGGGCCCTT------------------------SSCCC--TTSCCEEEECCTTTTCSHHHHHHHHHH
T ss_pred -CcCcEEEECCCCchhhccchh------------------------hhccc--CCCCcEEEEECCcCCccccchhhHHHH
Confidence 144677788887766543321 11222 344555 45557888877778888998
Q ss_pred HHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 571 ~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
..+... .++.+++++|..+ .+.+.+..++.+. ++++.|+.+ ++..+|+. +|++|.-+
T Consensus 204 ~~l~~~-~~~~vi~~~G~~~-----------~~~~~~~~~~~~~--~~~v~~f~~------dm~~~l~~-aDlvI~ra-- 260 (365)
T 3s2u_A 204 AQVPLE-IRPAIRHQAGRQH-----------AEITAERYRTVAV--EADVAPFIS------DMAAAYAW-ADLVICRA-- 260 (365)
T ss_dssp HTSCTT-TCCEEEEECCTTT-----------HHHHHHHHHHTTC--CCEEESCCS------CHHHHHHH-CSEEEECC--
T ss_pred Hhcccc-cceEEEEecCccc-----------cccccceeccccc--ccccccchh------hhhhhhcc-ceEEEecC--
Confidence 887543 3455554444322 2334444555554 567778544 57788885 99999754
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGP--------AEIIVHGKSGFHIDPY--KGDQATGILVDFFEKCKVDPGHWDEISQG 720 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~--------~EiI~dg~~G~li~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~ 720 (784)
-++|+.|+|++|+|+|....++. ++.+.+...|.+++.. +++.++++|.+ +++||+.+++|+++
T Consensus 261 --G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~----ll~d~~~~~~m~~~ 334 (365)
T 3s2u_A 261 --GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSE----VLMHPETLRSMADQ 334 (365)
T ss_dssp --CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHH----HHHCTHHHHHHHHH
T ss_pred --CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHH----HHCCHHHHHHHHHH
Confidence 37899999999999998766543 2345555589988765 47888888875 45799999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 721 GLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 721 a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++.. .....+.+++.++++.+-
T Consensus 335 a~~~~-~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 335 ARSLA-KPEATRTVVDACLEVARG 357 (365)
T ss_dssp HHHTC-CTTHHHHHHHHHHHHC--
T ss_pred HHhcC-CccHHHHHHHHHHHHHcc
Confidence 98875 556677888888877553
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.8e-17 Score=179.61 Aligned_cols=162 Identities=12% Similarity=0.018 Sum_probs=117.5
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEE-EEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNL-VVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~L-vIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+++++++++|++. .++.+.+.+++..+.+. +++++ +++|.+... +.+ + .+.++|.++|
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~~-----------~~l----~--~~~~~v~~~~-- 289 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVTP-----------AEL----G--ELPDNVEVHD-- 289 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---CG-----------GGG----C--SCCTTEEEES--
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCCh-----------HHh----c--cCCCCeEEEe--
Confidence 3456788999998 56666665555555443 46787 467776431 111 1 2467899999
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGDQATG 698 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e~lAe 698 (784)
+++.. .+++ .+|++|..+- +++++|||++|+|+|++..++ ..+.+.+...|+.++++ |++++++
T Consensus 290 --~~~~~---~~l~-~ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ 359 (430)
T 2iyf_A 290 --WVPQL---AILR-QADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRE 359 (430)
T ss_dssp --SCCHH---HHHT-TCSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHH
T ss_pred --cCCHH---HHhh-ccCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHH
Confidence 44443 5667 5999998752 379999999999999997765 46667777789999877 7899999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|.++ ++|++.++++++.+++.. +.++++.+++.++++++
T Consensus 360 ~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 360 TALAL----VDDPEVARRLRRIQAEMA-QEGGTRRAADLIEAELP 399 (430)
T ss_dssp HHHHH----HHCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHTTSC
T ss_pred HHHHH----HcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHhh
Confidence 99754 469999999999988876 66899999999988765
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=186.05 Aligned_cols=277 Identities=14% Similarity=0.105 Sum_probs=176.6
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||++.... .+.+.++++..++|++...+++.. + +.+ ..+... ......-+.+|.+++.|+.
T Consensus 110 ~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~rs--~---~~~-~~~~~~-------~~r~~~~~~a~~~~~~se~ 176 (396)
T 3dzc_A 110 EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRT--G---NIY-SPWPEE-------GNRKLTAALTQYHFAPTDT 176 (396)
T ss_dssp HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCC--S---CTT-SSTTHH-------HHHHHHHHTCSEEEESSHH
T ss_pred cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc--c---ccc-cCCcHH-------HHHHHHHHhcCEEECCCHH
Confidence 3899999987665 466678899999997654433311 1 000 000000 0111234678999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHH-HhhhcchhhhHHhhcCchhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEK-RRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~-~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
..+.. ...|++ +.++.+++|. +|...+.+..... ..+ ..+.++
T Consensus 177 ~~~~l--------------------~~~G~~--~~ki~vvGn~~~d~~~~~~~~~~~~~~~-------------~~~~r~ 221 (396)
T 3dzc_A 177 SRANL--------------------LQENYN--AENIFVTGNTVIDALLAVREKIHTDMDL-------------QATLES 221 (396)
T ss_dssp HHHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHHHHHHHCHHH-------------HHHHHH
T ss_pred HHHHH--------------------HHcCCC--cCcEEEECCcHHHHHHHhhhhcccchhh-------------HHHHHH
Confidence 66521 123554 6789999884 4432211110000 000 012345
Q ss_pred hhccccCCCCCE-EEEEeccc-CCCChHHHHHHHHHhHccCCCeEEEEE-eCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 539 HLCVLKDSSKPI-LFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 539 ~~gll~~~~k~i-Il~vGRL~-~~Kgi~~LieA~~~l~~~~~~v~LvIV-G~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
++|++ ++++++ +++.+|.. ..|+++.+++|+.++.+.+|++++++. |.++ ...+.++++ ++..
T Consensus 222 ~lg~l-~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~----------~~~~~l~~~---~~~~ 287 (396)
T 3dzc_A 222 QFPML-DASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNP----------NVREPVNKL---LKGV 287 (396)
T ss_dssp TCTTC-CTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHHHHHH---TTTC
T ss_pred HhCcc-CCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCCh----------HHHHHHHHH---HcCC
Confidence 56622 344455 44555654 347899999999999887889999986 4331 112222222 3455
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHH
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
++|.+++ .+...++..+|+. +|++|.+| | |++ +|||+||+|+|++ +.++..|++++| +++++++ |++
T Consensus 288 ~~v~~~~----~lg~~~~~~l~~~-ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~~ 355 (396)
T 3dzc_A 288 SNIVLIE----PQQYLPFVYLMDR-AHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-NQQ 355 (396)
T ss_dssp TTEEEEC----CCCHHHHHHHHHH-CSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-CHH
T ss_pred CCEEEeC----CCCHHHHHHHHHh-cCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-CHH
Confidence 7899987 5666788888985 99999998 3 444 8999999999999 888888999888 5777764 899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
++++++.+ +++||+.+++|++++. .|.....++++.++
T Consensus 356 ~l~~ai~~----ll~d~~~~~~m~~~~~-----~~~~~~aa~ri~~~ 393 (396)
T 3dzc_A 356 QICDALSL----LLTDPQAYQAMSQAHN-----PYGDGKACQRIADI 393 (396)
T ss_dssp HHHHHHHH----HHHCHHHHHHHHTSCC-----TTCCSCHHHHHHHH
T ss_pred HHHHHHHH----HHcCHHHHHHHhhccC-----CCcCChHHHHHHHH
Confidence 99999874 4579999999987653 35555555555544
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=183.43 Aligned_cols=162 Identities=13% Similarity=0.007 Sum_probs=123.0
Q ss_pred CCCEEEEEecccCCCCh-HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNL-TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi-~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
.+.+++++|++...|+. ..+++++.+. +..|+++++++|++... +.+ -++.++|++.|
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~-----------~~l------~~~~~~v~~~~--- 276 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR-----------ALL------TDLPDNARIAE--- 276 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-----------GGC------TTCCTTEEECC---
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch-----------hhc------ccCCCCEEEec---
Confidence 44567778998775555 7777777666 66678999999987430 111 13568899999
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC----CCHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVHGKSGFHIDP----YKGDQAT 697 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~dg~~G~li~p----~d~e~lA 697 (784)
+++..++. + ++|++|.. +-+.+++|||++|+|+|+. +..+..+.+.+...|..+++ .|+++++
T Consensus 277 -~~~~~~ll---~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~ 347 (391)
T 3tsa_A 277 -SVPLNLFL---R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFT 347 (391)
T ss_dssp -SCCGGGTG---G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHH
T ss_pred -cCCHHHHH---h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHH
Confidence 45555554 4 69999975 4457999999999999994 55567778888889999998 6888888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++. ++++||+.+++|++.+++.. +..+|+..++.++++..
T Consensus 348 ~ai~----~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 348 DSIA----TVLGDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHH----HHHTCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHH----HHHcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 8887 45689999999998887775 88999999998887643
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=185.18 Aligned_cols=156 Identities=11% Similarity=-0.005 Sum_probs=104.3
Q ss_pred CCCCEEEEEecccCCC----------ChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 546 SSKPILFTMARLDRVK----------NLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~K----------gi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
+.+++++++|++...| .+..+++++.++ ++++++++++.+ .+.+. .+.
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~-----------~~~l~------~~~ 283 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL-----------AQTLQ------PLP 283 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC-------------------------CC
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc-----------hhhhc------cCC
Confidence 3456788899997555 345555554432 588999888743 11111 356
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECCC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCNGGPAEIIVHGKSGFHIDPY 691 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIa----T~~GG~~EiI~dg~~G~li~p~ 691 (784)
++|++.| +++ +..+++ .+|++|.. +-+.+++|||+||+|+|+ ++..+..+.+.+...|+++++.
T Consensus 284 ~~v~~~~----~~~---~~~ll~-~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~ 351 (398)
T 4fzr_A 284 EGVLAAG----QFP---LSAIMP-ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWE 351 (398)
T ss_dssp TTEEEES----CCC---HHHHGG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC--
T ss_pred CcEEEeC----cCC---HHHHHh-hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcc
Confidence 8999999 454 345555 59999964 446899999999999999 4555778888888899999877
Q ss_pred --CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 692 --KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 692 --d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
|+++++++|.+ +++||+.+++|++.+++.. +..+|+.+++.+++
T Consensus 352 ~~~~~~l~~ai~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 352 QAGVESVLAACAR----IRDDSSYVGNARRLAAEMA-TLPTPADIVRLIEQ 397 (398)
T ss_dssp -----CHHHHHHH----HHHCTHHHHHHHHHHHHHT-TSCCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc
Confidence 67788888874 4579999999999888876 78999999887653
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.3e-17 Score=180.42 Aligned_cols=274 Identities=14% Similarity=0.085 Sum_probs=175.1
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||++.... .+.+.+++++.++|++....++.. + +.++ .+... ......-+.+|.+++.|+.
T Consensus 113 ~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglrs--~---~~~~-~~p~~-------~~r~~~~~~a~~~~~~se~ 179 (403)
T 3ot5_A 113 ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRT--W---NKYS-PFPEE-------MNRQLTGVMADIHFSPTKQ 179 (403)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC--S---CTTS-STTHH-------HHHHHHHHHCSEEEESSHH
T ss_pred cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc--c---cccc-CCcHH-------HHHHHHHHhcCEEECCCHH
Confidence 3999999987654 556678889999997644333211 0 0000 00000 0111233458999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+.. ...|++ +.++.+++| ++|...+.+.... ..+.++.
T Consensus 180 ~~~~l--------------------~~~Gi~--~~~i~vvGn~~~D~~~~~~~~~~-----------------~~~~~~~ 220 (403)
T 3ot5_A 180 AKENL--------------------LAEGKD--PATIFVTGNTAIDALKTTVQKDY-----------------HHPILEN 220 (403)
T ss_dssp HHHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHSCTTC-----------------CCHHHHS
T ss_pred HHHHH--------------------HHcCCC--cccEEEeCCchHHHHHhhhhhhc-----------------chHHHHh
Confidence 66521 123554 678999987 4554322221100 0011111
Q ss_pred hccccCCCCCEEEEEecccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 540 LCVLKDSSKPILFTMARLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
+ ++++.++++.||... .|++..+++|+.++.+.+++++++++++..+ ...+.+++. ++..++|
T Consensus 221 l----~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~---------~~~~~l~~~---~~~~~~v 284 (403)
T 3ot5_A 221 L----GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP---------AVREKAMAI---LGGHERI 284 (403)
T ss_dssp C----TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH---------HHHHHHHHH---HTTCTTE
T ss_pred c----cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH---------HHHHHHHHH---hCCCCCE
Confidence 1 223345666777643 4789999999999988788999998853211 111222222 3445789
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
.++| .+...++..+++. +|++|.+| |...+|||+||+|+|++ +.|+..|.++.| +|+++++ |+++++
T Consensus 285 ~l~~----~l~~~~~~~l~~~-ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~ 352 (403)
T 3ot5_A 285 HLIE----PLDAIDFHNFLRK-SYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLI 352 (403)
T ss_dssp EEEC----CCCHHHHHHHHHH-EEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHH
T ss_pred EEeC----CCCHHHHHHHHHh-cCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHH
Confidence 9998 6666789999995 99999887 44448999999999999 788888988777 8999876 899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
+++.+ +++|++.+++|++++..+. ...+++++++.+.+
T Consensus 353 ~ai~~----ll~~~~~~~~m~~~~~~~g-~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 353 KEALD----LLDNKESHDKMAQAANPYG-DGFAANRILAAIKS 390 (403)
T ss_dssp HHHHH----HHHCHHHHHHHHHSCCTTC-CSCHHHHHHHHHHH
T ss_pred HHHHH----HHcCHHHHHHHHhhcCccc-CCcHHHHHHHHHHH
Confidence 99975 4579999999987654432 34445555554444
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.3e-16 Score=172.55 Aligned_cols=157 Identities=14% Similarity=0.075 Sum_probs=117.0
Q ss_pred CCCCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.+++++++|++... ++...+.+++..+.+. +++++++|++.+. +.+ -++.++|++.|
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~-----------~~l------~~~~~~v~~~~-- 289 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDI-----------SPL------GTLPRNVRAVG-- 289 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCC-----------GGG------CSCCTTEEEES--
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcCh-----------hhh------ccCCCcEEEEc--
Confidence 345678889999654 4666666666666553 6899999988541 011 13578999999
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCccccc--cccccCceEEEECCC--CHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCNGGPA--EIIVHGKSGFHIDPY--KGDQA 696 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIa----T~~GG~~--EiI~dg~~G~li~p~--d~e~l 696 (784)
+++.. .+++ .+|++|.. +-+.+++|||++|+|+|+ .+.++.. +.+++...|+.+++. +.+.+
T Consensus 290 --~~~~~---~ll~-~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l 359 (398)
T 3oti_A 290 --WTPLH---TLLR-TCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLL 359 (398)
T ss_dssp --SCCHH---HHHT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHH
T ss_pred --cCCHH---HHHh-hCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHH
Confidence 44444 4555 59999975 445799999999999999 5667788 899888899999876 45555
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
+ ++++||+++++|++.+.+.. +..+|+.+++.++++.
T Consensus 360 ~--------~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 360 R--------RLIGDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp H--------HHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred H--------HHHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 4 23469999999998888765 8899999999998875
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-15 Score=164.40 Aligned_cols=161 Identities=11% Similarity=0.048 Sum_probs=113.4
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.+.++++.|+....++ +.+.+++..+.+. + +++++ +|++.+. +.+ + .+.++|++.|
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~g~~~~~-----------~~~----~--~~~~~v~~~~-- 287 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFADT-P-WHVVMAIGGFLDP-----------AVL----G--PLPPNVEAHQ-- 287 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHTTS-S-CEEEEECCTTSCG-----------GGG----C--SCCTTEEEES--
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHhcC-C-cEEEEEeCCcCCh-----------hhh----C--CCCCcEEEec--
Confidence 34567788999876552 3344444444332 2 66666 4544320 011 1 2567899998
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----CccccccccccCceEEEECCC--CHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----CNGGPAEIIVHGKSGFHIDPY--KGDQAT 697 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-----~~GG~~EiI~dg~~G~li~p~--d~e~lA 697 (784)
+++.. .+++ .+|++|..+- ..|++|||++|+|+|+. +..+..+.+.+...|..++++ ++++++
T Consensus 288 --~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~ 357 (402)
T 3ia7_A 288 --WIPFH---SVLA-HARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIR 357 (402)
T ss_dssp --CCCHH---HHHT-TEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHH
T ss_pred --CCCHH---HHHh-hCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHH
Confidence 44443 6666 4999998752 37899999999999954 445677788888899999876 788888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++.+ +++||+.++++++.+.+.. +..+++..++.++++++
T Consensus 358 ~~~~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 358 EAVER----LAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHH----HHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHH----HHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHh
Confidence 88874 4579999999988887765 77899999999988764
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-14 Score=156.81 Aligned_cols=161 Identities=11% Similarity=-0.023 Sum_probs=111.8
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEE-eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIV-G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.+.++++.|++...++ ..+..++..+.+. + ++++++ |.+.+. +.+ -.+.++|++.|
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~-~-~~~v~~~g~~~~~-----------~~l------~~~~~~v~~~~-- 303 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDGQ-P-WHVVMTLGGQVDP-----------AAL------GDLPPNVEAHR-- 303 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHHTTS-S-CEEEEECTTTSCG-----------GGG------CCCCTTEEEES--
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHHhcC-C-cEEEEEeCCCCCh-----------HHh------cCCCCcEEEEe--
Confidence 34566778898865432 3333333334332 3 777774 444320 011 13567899998
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECCC--CHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVHGKSGFHIDPY--KGDQATG 698 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~dg~~G~li~p~--d~e~lAe 698 (784)
+++.. .+++ .+|++|..+- ..|++|||++|+|+|+. +.....+.+.+...|..++++ +++++++
T Consensus 304 --~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~ 373 (415)
T 3rsc_A 304 --WVPHV---KVLE-QATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLA 373 (415)
T ss_dssp --CCCHH---HHHH-HEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHH
T ss_pred --cCCHH---HHHh-hCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHH
Confidence 44444 5566 4999998752 36899999999999994 445567777777789999876 7888888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|. ++++||+.++++++.+.+.. +...++..++.+++++.
T Consensus 374 ~i~----~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 374 AVG----AVAADPALLARVEAMRGHVR-RAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHH----HHHTCHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHH----HHHcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 887 55689999999988777765 77899999998888764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.6e-14 Score=155.95 Aligned_cols=156 Identities=15% Similarity=0.070 Sum_probs=112.2
Q ss_pred CCCEEEEEecccCC-------CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 547 SKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 547 ~k~iIl~vGRL~~~-------Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
...++++.|++... +.+..+++++.++ ++++++++++.+ .+.+. . ++++|.
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~-----------~~~l~----~--~~~~v~ 267 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTV-----------AEALR----A--EVPQAR 267 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHH-----------HHHHH----H--HCTTSE
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCC-----------HHhhC----C--CCCceE
Confidence 34578899999875 5667777776543 578888776411 12222 1 356889
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KG 693 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~ 693 (784)
+ | +++..+ +++ ++|+||..+ -+.+++|||++|+|+|++..++ ..+.+.+...|+.+++. +.
T Consensus 268 ~-~----~~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~ 334 (384)
T 2p6p_A 268 V-G----WTPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDST 334 (384)
T ss_dssp E-E----CCCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCH
T ss_pred E-c----CCCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCH
Confidence 9 9 555444 455 599999873 3569999999999999997654 66767777789999875 68
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
++++++|.++ +.||++++++++.+.+.. ..-.-+..++.+.++.
T Consensus 335 ~~l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 335 EAIADSCQEL----QAKDTYARRAQDLSREIS-GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHH----HHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 8888888754 469999999988877665 5557777777776654
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.7e-13 Score=149.81 Aligned_cols=157 Identities=14% Similarity=0.052 Sum_probs=114.5
Q ss_pred CCEEEEEecccCC-----CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 548 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 548 k~iIl~vGRL~~~-----Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
..++++.|++... |.+..++++++.+ ++++++++++... +.+ + +++++|++.|
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-----------~~l----~--~~~~~v~~~~ 325 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQL-----------EGV----A--NIPDNVRTVG 325 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTT-----------SSC----S--SCCSSEEECC
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcch-----------hhh----c--cCCCCEEEec
Confidence 4578889998753 8888888888653 5788888776431 001 1 3567899998
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGDQA 696 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e~l 696 (784)
+++..++ +. ++|++|.. +-+.|+.|||++|+|+|+...++ .++.+.+...|+.+++. +++++
T Consensus 326 ----~~~~~~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l 393 (441)
T 2yjn_A 326 ----FVPMHAL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQL 393 (441)
T ss_dssp ----SCCHHHH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHH
T ss_pred ----CCCHHHH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHH
Confidence 5555444 45 59999985 33579999999999999997743 56667777789999876 78888
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++|.++ ++|+++++++++.+.+.. +...++.+++.+++++.
T Consensus 394 ~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 394 RESVKRV----LDDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHH----HHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHH----hcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 8888754 469999999988887765 78899999999888754
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=152.02 Aligned_cols=272 Identities=11% Similarity=0.038 Sum_probs=166.8
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
.+||+|+++.......+.++|++.++|++..-.++.. .+..+. +. ......-..+|.+++.|+..
T Consensus 93 ~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglrs-----~~~~~p--ee--------~nR~~~~~~a~~~~~~te~~ 157 (385)
T 4hwg_A 93 EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRC-----FDQRVP--EE--------INRKIIDHISDVNITLTEHA 157 (385)
T ss_dssp HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCCC-----SCTTST--HH--------HHHHHHHHHCSEEEESSHHH
T ss_pred cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCcc-----ccccCc--HH--------HHHHHHHhhhceeecCCHHH
Confidence 3899999987654333377888999997644433311 000000 00 01112335689999999876
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.+.. ...|++ +.++.++.|. +|...+.. ... +..+.++++
T Consensus 158 ~~~l--------------------~~~G~~--~~~I~vtGnp~~D~~~~~~--~~~---------------~~~~~~~~l 198 (385)
T 4hwg_A 158 RRYL--------------------IAEGLP--AELTFKSGSHMPEVLDRFM--PKI---------------LKSDILDKL 198 (385)
T ss_dssp HHHH--------------------HHTTCC--GGGEEECCCSHHHHHHHHH--HHH---------------HHCCHHHHT
T ss_pred HHHH--------------------HHcCCC--cCcEEEECCchHHHHHHhh--hhc---------------chhHHHHHc
Confidence 6521 123554 6789999873 34211100 000 012345667
Q ss_pred ccccCCCCCEEEEEeccc---CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-C-C-
Q 003947 541 CVLKDSSKPILFTMARLD---RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-K-L- 614 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~---~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~-L- 614 (784)
|+ ++++.++++.+|.. ..|++..+++|+.++.+.. ++.+++..+. .+.+.++++ + +
T Consensus 199 gl--~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p---------------~~~~~l~~~~~~~~ 260 (385)
T 4hwg_A 199 SL--TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHP---------------RTKKRLEDLEGFKE 260 (385)
T ss_dssp TC--CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECH---------------HHHHHHHTSGGGGG
T ss_pred CC--CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECCh---------------HHHHHHHHHHHHhc
Confidence 76 44445566666643 4478999999999987644 6777775531 134445554 3 2
Q ss_pred -CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCC
Q 003947 615 -NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 615 -~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d 692 (784)
.++|.+++ .+...++..+++. +|+++.+| |....||+++|+|+|+.+.. +..|.+..| ++.++++ |
T Consensus 261 ~~~~v~l~~----~lg~~~~~~l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d 328 (385)
T 4hwg_A 261 LGDKIRFLP----AFSFTDYVKLQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K 328 (385)
T ss_dssp TGGGEEECC----CCCHHHHHHHHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S
T ss_pred CCCCEEEEc----CCCHHHHHHHHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C
Confidence 46899987 5666788888885 99999877 55679999999999998554 357777777 6777754 8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
.+++++++. .+++|+..+++|++++..++-...+-+++++.+.+.
T Consensus 329 ~~~i~~ai~----~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 329 AERVLQAVK----TITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSY 373 (385)
T ss_dssp HHHHHHHHH----HHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHhChHHHHHhhccCCCCCCCChHHHHHHHHHHHH
Confidence 999998887 455788777666654443201233444445444443
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.7e-13 Score=158.45 Aligned_cols=332 Identities=12% Similarity=0.019 Sum_probs=206.2
Q ss_pred CceEEEEcCCChhHHHH-HHHHh--------------CCCcEEEEecCCcccCC---CCCc--------------chhhh
Q 003947 383 KPDLIIGNYSDGNIVAS-LLAHK--------------LDVTQCTIAHALELTKY---PDSD--------------INWKK 430 (784)
Q Consensus 383 ~pDIIh~~~~~~~lva~-llar~--------------~gvp~V~t~H~l~~~k~---~~s~--------------~~~~~ 430 (784)
+||+||+|.++++++.. ++... .+.++++|.|++.+.-. +..- +.+.-
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999877555 33221 24578999999865331 1000 00000
Q ss_pred cc-------------c-cccccchhhhhHHHhcccCEEEecChHhHhhcccc-ccccccccccccccceeeecCCCCCCC
Q 003947 431 LD-------------D-KYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT-VGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 431 ~~-------------~-~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~-vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
+. . ....-.++..-..++..|+.|.+||+.-.+.++.. .+ ++++ ..+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~-----------~~~~------~~p~ 431 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA-----------DWYA------LWPE 431 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH-----------HHHH------HCGG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh-----------hHHH------cCcc
Confidence 00 0 00000122223467899999999998777655532 11 1111 2367
Q ss_pred ceEEecCCCCCCCC----CCCcHHH--Hhhh------------cchh---------hh-HHhhcCchh----hhhhhccc
Q 003947 496 KFNIVSPGADMTIY----FPYMEEK--RRLK------------HFHS---------EI-EELLYSPVE----NKEHLCVL 543 (784)
Q Consensus 496 k~~VIpnGvD~~~f----~p~~~~~--~rl~------------~~~~---------~~-~~~l~~~~~----~~~~~gll 543 (784)
|++-|.||||...| .|..+.- ..+. ++.+ ++ +...-++.. .+++.|+.
T Consensus 432 kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~ 511 (796)
T 2c4m_A 432 KFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIE 511 (796)
T ss_dssp GEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred ccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 89999999999998 3432111 0000 0000 00 111122333 35677887
Q ss_pred cCCCCCEEEEEecccCCCChHH-HHHHHHHhHc--cC-----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH----h
Q 003947 544 KDSSKPILFTMARLDRVKNLTG-LVEWYGKNAK--LR-----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID----T 611 (784)
Q Consensus 544 ~~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~--~~-----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~----~ 611 (784)
.+++.+.++++.|+...|+.+. ++..+.++.+ .. ..+.+++.|.+.+. +...+..++.+..+++ .
T Consensus 512 vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~---y~~aK~iIk~i~~va~~in~d 588 (796)
T 2c4m_A 512 IDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPG---YVRAKAIIKLINSIADLVNND 588 (796)
T ss_dssp CCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTT---CHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHh---HHHHHHHHHHHHHHHHHhccc
Confidence 7889999999999999999999 7888777653 22 35899999988653 3344445555555555 2
Q ss_pred cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceE
Q 003947 612 YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH--GKSG 685 (784)
Q Consensus 612 l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d--g~~G 685 (784)
...++ +|.|+. ..+. .+.+.+..++|++.+||. +|++|+.-+=||..|.++|+|-.|...|+.++ ..||
T Consensus 589 p~~~~~lKVvFl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 663 (796)
T 2c4m_A 589 PEVSPLLKVVFVE----NYNV-SPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENA 663 (796)
T ss_dssp TTTTTTEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcE
Confidence 34567 788885 3333 555555557999999999 99999999999999999999999999888765 4699
Q ss_pred EEECC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 686 FHIDP--YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 686 ~li~p--~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
|+|.. .++.++-.. .+..+....+| .++++-+++.. ..|+|..- +.+..+|...
T Consensus 664 F~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~-~~y~~Ly~~L 719 (796)
T 2c4m_A 664 YIFGARVEELPALRES-YKPYELYETVP-GLKRALDALDN---GTLNDNNS-GLFYDLKHSL 719 (796)
T ss_dssp EEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTTS---SSSCCTTC-CHHHHHHHHH
T ss_pred EEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHHc---CCCCCCCH-HHHHHHHHHH
Confidence 99976 566655443 22222223445 34444333332 45777654 4555565543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.9e-12 Score=139.56 Aligned_cols=156 Identities=13% Similarity=0.039 Sum_probs=108.6
Q ss_pred CCCCEEEEEeccc-CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
..++++++.|++. ..+.+..+++++.++ +++++++++.... +..+..++|++.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~------------------~~~~~~~~v~~~~-- 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGL------------------GRIDEGDDCLVVG-- 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTC------------------CCSSCCTTEEEES--
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccc------------------ccccCCCCEEEec--
Confidence 4567888999998 666677777777664 4677777665331 1124468899998
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEECCC--CHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEIIVHGKSGFHIDPY--KGDQATG 698 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI~dg~~G~li~p~--d~e~lAe 698 (784)
+++..++. . .+|++|..+- ..|+.|||++|+|+|+...++- .+.+++...|..+++. +.+++++
T Consensus 275 --~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 344 (404)
T 3h4t_A 275 --EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSA 344 (404)
T ss_dssp --SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred --CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHH
Confidence 56555544 4 5999998641 2689999999999999865543 3445555688888754 6788888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|. ++++ |++++++.+.+.+.. . -.++..++.++++++
T Consensus 345 ai~----~ll~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 345 ALA----TALT-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHH----HHTS-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHHH
T ss_pred HHH----HHhC-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHh
Confidence 886 5567 888888777665543 3 567777777777654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.43 E-value=5e-11 Score=132.89 Aligned_cols=161 Identities=16% Similarity=0.083 Sum_probs=108.6
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.+.++++.|++. .+....+.+++..+.+ .++++++ +|.+.+. +.+ + .++++|++.|
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~-----------~~~----~--~~~~~v~~~~-- 311 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDP-----------ADL----G--EVPPNVEVHQ-- 311 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCG-----------GGG----C--SCCTTEEEES--
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCCh-----------HHh----c--cCCCCeEEec--
Confidence 3456778889987 3444444455555544 4567754 5655320 111 1 2567899998
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGDQATG 698 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e~lAe 698 (784)
+++.. .+++ .+|++|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+++. +.+++++
T Consensus 312 --~~~~~---~~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~ 381 (424)
T 2iya_A 312 --WVPQL---DILT-KASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLRE 381 (424)
T ss_dssp --SCCHH---HHHT-TCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHH
T ss_pred --CCCHH---HHHh-hCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHH
Confidence 45443 4666 499999753 2479999999999999986643 34556666789998765 7888888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|.+ +++|++.++++++.+.+.. +....+..++.++++.+
T Consensus 382 ~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 382 AVLA----VASDPGVAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHH----HHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHH----HHcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 8875 4469998888877766643 55677777777777654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-11 Score=145.43 Aligned_cols=230 Identities=13% Similarity=0.066 Sum_probs=157.9
Q ss_pred hHHHhcccCEEEecChHhHhhcccc-ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCC----CCCcHHHH-
Q 003947 444 DLFAMNRTDFIITSTFQEIAGSKDT-VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY----FPYMEEKR- 517 (784)
Q Consensus 444 e~~a~~~AD~IIt~S~~~~~~~~~~-vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f----~p~~~~~~- 517 (784)
-..++..|+.|.+||+.-.+.++.. ++. ++. ..+.|++-|.||||...| .|..+..-
T Consensus 431 a~lai~~S~~VNgVS~lH~e~ik~~~f~~-----------~~~------~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~ 493 (824)
T 2gj4_A 431 AHLCIAGSHAVNGVARIHSEILKKTIFKD-----------FYE------LEPHKFQNKTNGITPRRWLVLCNPGLAEIIA 493 (824)
T ss_dssp HHHHHHTCSCEEESSHHHHHHHHHTTTHH-----------HHH------HCGGGEEECCCCBCTCCCCCCTCHHHHHHHH
T ss_pred HHHHHHhcCceeeEcHHHHHHHhhHHhHH-----------HHH------cChhhcccccCCcChhhhcccCCHhHHHHHH
Confidence 3468999999999998877655432 221 121 126799999999999998 45322110
Q ss_pred -h-----------hhc---ch--hhh-----HHhhcCchh----hhhhhccccCCCCCEEEEEecccCCCChHHH-HHHH
Q 003947 518 -R-----------LKH---FH--SEI-----EELLYSPVE----NKEHLCVLKDSSKPILFTMARLDRVKNLTGL-VEWY 570 (784)
Q Consensus 518 -r-----------l~~---~~--~~~-----~~~l~~~~~----~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~L-ieA~ 570 (784)
. +.+ +. ..+ +...-++.. ..++.|+..+++.+.++++.|+...|+.+.+ +..+
T Consensus 494 ~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i 573 (824)
T 2gj4_A 494 ERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVI 573 (824)
T ss_dssp HHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHH
T ss_pred HhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHH
Confidence 1 000 00 111 111122222 4556788778899999999999999999997 7777
Q ss_pred HHhHc--cCC-----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC----CCC--cEEEccCcCCcCChhHHHHHH
Q 003947 571 GKNAK--LRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK----LNG--QFRWISSQMNRVRNGELYRYI 637 (784)
Q Consensus 571 ~~l~~--~~~-----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~----L~~--~V~flG~~~~~v~~~el~~~l 637 (784)
.++.+ ..| .+.+++.|.+.+. +...+..++.+..+++.++ +.+ +|.|+. ..+. .+.+.+
T Consensus 574 ~~~~~i~~~~~~~~~p~q~If~GKA~P~---y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~----nYdv-slA~~I 645 (824)
T 2gj4_A 574 TLYNRIKKEPNKFVVPRTVMIGGKAAPG---YHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NYRV-SLAEKV 645 (824)
T ss_dssp HHHHHHHHCTTSCCCCEEEEEECCCCTT---CHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TCCH-HHHHHH
T ss_pred HHHHHHHhCCCCCCCCEEEEEEEeCCHh---HHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC----CCCH-HHHHHH
Confidence 66631 122 5789999988653 4445556666777776553 456 788885 3333 555555
Q ss_pred HccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHH
Q 003947 638 CDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIV--HGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 638 a~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~--dg~~G~li~p~d~e~lAe~I 700 (784)
..++|++.+||. +|++|+.-+=||..|.++|+|-.|...|+.+ ...|||+|... ++++ ..+
T Consensus 646 ~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 646 IPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp GGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred hhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 557999999999 9999999999999999999999888888865 45689999875 6666 444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.2e-12 Score=150.51 Aligned_cols=333 Identities=13% Similarity=0.029 Sum_probs=209.9
Q ss_pred CceEEEEcCCChhHHHH-HHHHh--------------CCCcEEEEecCCcccC---CCCCcc------hhh---hccc--
Q 003947 383 KPDLIIGNYSDGNIVAS-LLAHK--------------LDVTQCTIAHALELTK---YPDSDI------NWK---KLDD-- 433 (784)
Q Consensus 383 ~pDIIh~~~~~~~lva~-llar~--------------~gvp~V~t~H~l~~~k---~~~s~~------~~~---~~~~-- 433 (784)
+||+||+|.++++++.. ++... .+.++++|.|++.+.- |+..-+ ... .+..
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999877555 33221 3678999999986533 110000 000 0000
Q ss_pred -------------cc-c----ccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 434 -------------KY-H----FSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 434 -------------~y-~----~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
.+ + .-.++..-..++..|+.|.+||+.-.+.++...- ++++ ..++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f----------~~~~------~~~p~ 442 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLF----------PEYH------QLWPN 442 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTS----------HHHH------HHCGG
T ss_pred HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHh----------hHHH------HhCcc
Confidence 00 0 0001222346789999999999877765543210 0111 12367
Q ss_pred ceEEecCCCCCCCC----CCCcHHH--Hh-----------hhcchh---------hh-HHhhcCchh----hhhhhcccc
Q 003947 496 KFNIVSPGADMTIY----FPYMEEK--RR-----------LKHFHS---------EI-EELLYSPVE----NKEHLCVLK 544 (784)
Q Consensus 496 k~~VIpnGvD~~~f----~p~~~~~--~r-----------l~~~~~---------~~-~~~l~~~~~----~~~~~gll~ 544 (784)
|++-|.||||...| .|..+.- .. +.++.+ ++ +...-++.. .+++.|+..
T Consensus 443 k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 522 (796)
T 1l5w_A 443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522 (796)
T ss_dssp GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 89999999998887 3432111 00 001000 00 111122223 356678877
Q ss_pred CCCCCEEEEEecccCCCChHH-HHHHHHHhHcc--C-----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH----hc
Q 003947 545 DSSKPILFTMARLDRVKNLTG-LVEWYGKNAKL--R-----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID----TY 612 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~~--~-----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~----~l 612 (784)
+++.+.++++.|+...|+.+. ++..+.++.+. . ..+.+++.|.+.+. +...+..++.+..+++ ..
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~---y~~aK~iIk~i~~va~~in~Dp 599 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVADVINNDP 599 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT---CHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChh---HHHHHHHHHHHHHHHHHhcccc
Confidence 889999999999999999999 78877766431 2 35899999988653 3334445555555555 23
Q ss_pred CCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceEE
Q 003947 613 KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH--GKSGF 686 (784)
Q Consensus 613 ~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d--g~~G~ 686 (784)
..++ +|.|+. ..+. .+.+.+..++|++.+||. +|++|+.-+=||..|.++|+|-.|...|+.++ ..|||
T Consensus 600 ~~~~~lKVvfl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF 674 (796)
T 1l5w_A 600 LVGDKLKVVFLP----DYCV-SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIF 674 (796)
T ss_dssp TTGGGEEEEECS----SCCH-HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred ccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEE
Confidence 4567 788885 3333 555555557999999999 99999999999999999999999999888765 46999
Q ss_pred EECCCCHHHHHHH---HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 687 HIDPYKGDQATGI---LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 687 li~p~d~e~lAe~---I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
+|.. +++++.+. ..+..+....+| .++++-+++.. ..|+|..- +.+..+|...
T Consensus 675 ~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~-~~y~~Ly~~L 730 (796)
T 1l5w_A 675 IFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES---GKYSDGDK-HAFDQMLHSI 730 (796)
T ss_dssp ECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH---TTTTTTCT-TTTHHHHHHT
T ss_pred EecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc---CCCCCCcH-HHHHHHHHHH
Confidence 9976 77776532 111222223466 35555555543 57999774 6788888764
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-11 Score=133.16 Aligned_cols=154 Identities=12% Similarity=0.016 Sum_probs=104.3
Q ss_pred CCCEEEEEecc-cCCCChHHHHHHHHHhHccCCCeEEEEE-eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 547 SKPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL-~~~Kgi~~LieA~~~l~~~~~~v~LvIV-G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+..++++.|++ ...+..+.++++++++. .+++++ |.+... ...++++|++.|
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~~-------------------~~~~~~~v~~~~-- 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADLV-------------------LPDDGADCFAIG-- 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTCC-------------------CSSCGGGEEECS--
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCccc-------------------ccCCCCCEEEeC--
Confidence 45788899999 57788888888887652 456555 544220 013457899998
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGDQATG 698 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e~lAe 698 (784)
+++..++ ++ ++|+||..+ | ..+++|||++|+|+|+....+ ..+.+++...|..+++. +.+++++
T Consensus 292 --~~~~~~~---l~-~~d~~v~~~---G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~ 361 (415)
T 1iir_A 292 --EVNHQVL---FG-RVAAVIHHG---G-AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (415)
T ss_dssp --SCCHHHH---GG-GSSEEEECC---C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred --cCChHHH---Hh-hCCEEEeCC---C-hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHH
Confidence 6666555 45 699999863 2 369999999999999986654 45666666789998764 6778888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
+|. ++ .|++.++++++.+.+.. ..-..+.+++.++++.
T Consensus 362 ~i~----~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 362 ALA----TA-LTPETHARATAVAGTIR-TDGAAVAARLLLDAVS 399 (415)
T ss_dssp HHH----HH-TSHHHHHHHHHHHHHSC-SCHHHHHHHHHHHHHH
T ss_pred HHH----HH-cCHHHHHHHHHHHHHHh-hcChHHHHHHHHHHHH
Confidence 775 66 78988887766655432 3344555555555543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=139.85 Aligned_cols=187 Identities=9% Similarity=-0.031 Sum_probs=128.5
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEE--EEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLV--VVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~Lv--IVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
+|++.+++.+++++.+++ .|..+.+++++.++.+..|+..++ ++|.+.. .+ +.+.+.+.+.|+.++
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g------~~----~~~~~~~~~~GI~~R 500 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG------IT----HPYVERFIKSYLGDS 500 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG------GG----HHHHHHHHHHHHGGG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch------hh----HHHHHHHHHcCCCcc
Confidence 455222335667777764 799999999999998888887765 3564321 01 122233456678789
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccc------cCceEEEECCC
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIV------HGKSGFHIDPY 691 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~------dg~~G~li~p~ 691 (784)
+.|+| +++..+..+.++. +|+++-|+.+.+ |+|.+|||+||+|||+...+++..-+. -|..+++|. .
T Consensus 501 v~F~g----~~p~~e~la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-~ 573 (631)
T 3q3e_A 501 ATAHP----HSPYHQYLRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-N 573 (631)
T ss_dssp EEEEC----CCCHHHHHHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-S
T ss_pred EEEcC----CCCHHHHHHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-C
Confidence 99999 7778888888885 999999998766 999999999999999966555544432 244443232 3
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-Hhhhhh
Q 003947 692 KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG-VYGFWK 749 (784)
Q Consensus 692 d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~-~~~~~~ 749 (784)
|.++.+++.. ++.+|++.+++++++.+++.....-|+..++++.++|+ .+.-|.
T Consensus 574 d~eeYv~~Av----~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~ 628 (631)
T 3q3e_A 574 TVDEYVERAV----RLAENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFL 628 (631)
T ss_dssp SHHHHHHHHH----HHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH----HHhCCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHH
Confidence 6788887776 55689999999999999886553222244555555554 234454
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-10 Score=128.75 Aligned_cols=152 Identities=12% Similarity=-0.007 Sum_probs=101.0
Q ss_pred CCCEEEEEeccc---CCCChHHHHHHHHHhHccCCCeEEEEE-eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 547 SKPILFTMARLD---RVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 547 ~k~iIl~vGRL~---~~Kgi~~LieA~~~l~~~~~~v~LvIV-G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
++.++++.|++. ..+.+..++++++.+ +++++++ |.+... ...+++++.+.+
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~-------------------~~~~~~~v~~~~ 292 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV-------------------LPDDRDDCFAID 292 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC-------------------CSCCCTTEEEES
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc-------------------ccCCCCCEEEec
Confidence 456788899985 456677777777664 3566665 544210 023567899998
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECC--CCHHHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDP--YKGDQA 696 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p--~d~e~l 696 (784)
+++..++ +. ++|++|.-+ -..|+.|||++|+|+|+....+ ..+.+++...|..++. .+.+++
T Consensus 293 ----~~~~~~l---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l 360 (416)
T 1rrv_A 293 ----EVNFQAL---FR-RVAAVIHHG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESL 360 (416)
T ss_dssp ----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHH
T ss_pred ----cCChHHH---hc-cCCEEEecC----ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHH
Confidence 6665554 45 699999842 2469999999999999975543 4555666668998875 367777
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL-LNL 741 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l-l~l 741 (784)
+++|. ++ .|+++++++++.+.+.. ..-.+ ..++.+ +.+
T Consensus 361 ~~~i~----~l-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~e~~ 399 (416)
T 1rrv_A 361 SAALT----TV-LAPETRARAEAVAGMVL-TDGAA-AAADLVLAAV 399 (416)
T ss_dssp HHHHH----HH-TSHHHHHHHHHHTTTCC-CCHHH-HHHHHHHHHH
T ss_pred HHHHH----Hh-hCHHHHHHHHHHHHHHh-hcCcH-HHHHHHHHHH
Confidence 77775 67 79988888776554433 22333 445544 444
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=4.8e-11 Score=131.26 Aligned_cols=158 Identities=16% Similarity=0.163 Sum_probs=102.2
Q ss_pred CCCCEEEEEecccCCCC-hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 546 SSKPILFTMARLDRVKN-LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kg-i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+..+++++.|++...++ ...+.+++..+.+ .+..+++++++.+. .....+++++.+.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~-----------------~~~~~~~~~v~~~~-- 294 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDL-----------------ALLGELPANVRVVE-- 294 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCC-----------------CCCCCCCTTEEEEC--
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCccc-----------------cccccCCCCEEEEe--
Confidence 34456778888876543 4455555555554 35666766655431 01124678899988
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCCCHHHHHHHH
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
+++..++ ++ .+|+||.- +-..++.|||++|+|+|+....+ ..+.+++...|..+++.+ ..+++|
T Consensus 295 --~~p~~~l---L~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~--~~~~al 362 (400)
T 4amg_A 295 --WIPLGAL---LE-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGS--LGAEQC 362 (400)
T ss_dssp --CCCHHHH---HT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTT--CSHHHH
T ss_pred --ecCHHHH---hh-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCC--chHHHH
Confidence 6666554 45 58999864 34568999999999999965443 455566656788887544 456777
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 701 ~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
.+ +++||+++++..+-+.+ +...-+....++.++++
T Consensus 363 ~~----lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 363 RR----LLDDAGLREAALRVRQE-MSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HH----HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHH
T ss_pred HH----HHcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHh
Confidence 64 45799988776654444 44556888888888776
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.1e-09 Score=104.45 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=97.3
Q ss_pred CCCEEEEEeccc---CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 547 SKPILFTMARLD---RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 547 ~k~iIl~vGRL~---~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
.+.++++.|++. +.|++..+++++.++ +.++++++++... -.+.++|++.|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~--------------------~~~~~~v~~~~- 74 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP--------------------DTLGLNTRLYK- 74 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC--------------------TTCCTTEEEES-
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc--------------------ccCCCcEEEec-
Confidence 456788999986 567777777777543 3688888876431 03467899998
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHGKSGFHIDPY--KGDQAT 697 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg~~G~li~p~--d~e~lA 697 (784)
+++..++..+ + ++|++|.. +-+.|++|||++|+|+|+.... +..+.+.+...|+.+++. +.++++
T Consensus 75 ---~~~~~~~l~~-~-~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~ 145 (170)
T 2o6l_A 75 ---WIPQNDLLGH-P-KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLL 145 (170)
T ss_dssp ---SCCHHHHHTS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHH
T ss_pred ---CCCHHHHhcC-C-CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHH
Confidence 5666565533 5 59999985 3468999999999999999764 346677777899999877 788899
Q ss_pred HHHHHHHHHhcCCHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEIS 718 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~ 718 (784)
++|.++ +.|++.++++.
T Consensus 146 ~~i~~l----l~~~~~~~~a~ 162 (170)
T 2o6l_A 146 NALKRV----INDPSYKENVM 162 (170)
T ss_dssp HHHHHH----HHCHHHHHHHH
T ss_pred HHHHHH----HcCHHHHHHHH
Confidence 988754 46887555443
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=9.6e-05 Score=88.31 Aligned_cols=183 Identities=12% Similarity=0.028 Sum_probs=133.5
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
.|..+|+ +.+.+++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.+++.|+.
T Consensus 513 ~R~~~gL--p~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~----------~~~~l~~~~~~~gi~ 578 (723)
T 4gyw_A 513 TRSQYGL--PEDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEPNIQQYAQNMGLP 578 (723)
T ss_dssp EGGGGTC--CTTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGG----------GHHHHHHHHHHTTCC
T ss_pred chhhcCC--CCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH----------HHHHHHHHHHhcCCC
Confidence 4566787 5666666666555 4666788888888888889999999886532 124577788888885
Q ss_pred -CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----cc-CceEEEE
Q 003947 616 -GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII-----VH-GKSGFHI 688 (784)
Q Consensus 616 -~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI-----~d-g~~G~li 688 (784)
++|.|.+ +.+..+-...+.. +|+++=|--|-| |.|..||+.||+|||+-....+..-+ .. |-.-++.
T Consensus 579 ~~r~~f~~----~~~~~~~l~~~~~-~Di~LDt~p~~g-~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 579 QNRIIFSP----VAPKEEHVRRGQL-ADVCLDTPLCNG-HTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp GGGEEEEE----CCCHHHHHHHGGG-CSEEECCSSSCC-SHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC
T ss_pred cCeEEECC----CCCHHHHHHHhCC-CeEEeCCCCcCC-HHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc
Confidence 7899998 6677888887885 999998876655 88999999999999975322222111 10 1112222
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE--KYTWKIYSERLLNLSGV 744 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~--~ytw~~~a~~ll~ly~~ 744 (784)
.|.++..+... ++.+|++.+.++.++-++.... -|+-+.+++.+++.|+.
T Consensus 653 --~~~~~Y~~~a~----~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 653 --KNRQEYEDIAV----KLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp --SSHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH
Confidence 46677666655 4557999999999988888755 48999999999999985
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.0034 Score=71.12 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=83.8
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
...++++.|.+.. .....+.+++..+.+ .+.+++++-+.......+ . ...+.+. +.. .+++...+
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~l~~~~~~~~~~~~-~--~l~~~~~---~~~--~~~~~v~~---- 359 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLAN--CKKSFLWIIRPDLVIGGS-V--IFSSEFT---NEI--ADRGLIAS---- 359 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHH--TTCEEEEECCGGGSTTTG-G--GSCHHHH---HHH--TTTEEEES----
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHh--cCCcEEEEEcCCcccccc-c--cCcHhHH---Hhc--CCCEEEEe----
Confidence 3456677787653 344445555555544 246766664432100000 0 0001111 111 46788887
Q ss_pred cCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEECC-CCHHHHHHH
Q 003947 627 RVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIV-HGKSGFHIDP-YKGDQATGI 699 (784)
Q Consensus 627 ~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~-dg~~G~li~p-~d~e~lAe~ 699 (784)
+++..+ +++. ++++||.= +=..+++||+++|+|+|+-...+ .+..+. +-..|..++. -+.++++++
T Consensus 360 ~~pq~~---~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~ 432 (482)
T 2pq6_A 360 WCPQDK---VLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKL 432 (482)
T ss_dssp CCCHHH---HHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHH
T ss_pred ecCHHH---HhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHH
Confidence 565544 5542 24457753 22468999999999999975543 234343 4457888762 266777777
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRI 725 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v 725 (784)
|. +++.|++ .++|.+++++..
T Consensus 433 i~----~ll~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 433 IN----EVIAGDK-GKKMKQKAMELK 453 (482)
T ss_dssp HH----HHHTSHH-HHHHHHHHHHHH
T ss_pred HH----HHHcCCc-HHHHHHHHHHHH
Confidence 76 4557886 356666665543
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.009 Score=67.73 Aligned_cols=70 Identities=9% Similarity=0.138 Sum_probs=44.9
Q ss_pred cCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEECCC-----CHH
Q 003947 627 RVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEII-VHGKSGFHIDPY-----KGD 694 (784)
Q Consensus 627 ~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI-~dg~~G~li~p~-----d~e 694 (784)
+++.. .+++ .++ +||.= -| -.+++||+++|+|+|+-...+ .+..+ +.-..|..++.. +.+
T Consensus 346 w~Pq~---~vL~-h~~v~~fvtH---gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~ 417 (480)
T 2vch_A 346 WAPQA---QVLA-HPSTGGFLTH---CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 417 (480)
T ss_dssp CCCHH---HHHH-STTEEEEEEC---CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred ccCHH---HHhC-CCCcCeEEec---cc-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence 44444 4554 366 56643 22 358999999999999975433 34443 455678877653 577
Q ss_pred HHHHHHHHHH
Q 003947 695 QATGILVDFF 704 (784)
Q Consensus 695 ~lAe~I~~~l 704 (784)
+++++|.+++
T Consensus 418 ~l~~av~~vl 427 (480)
T 2vch_A 418 EVARVVKGLM 427 (480)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888887544
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.003 Score=71.15 Aligned_cols=148 Identities=10% Similarity=0.054 Sum_probs=83.6
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+...++++.|.+... ..+.+.+++..+.+. +++++++-+.... ..-++ .+. ++ ..+++...+
T Consensus 270 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~-~~l~~------~~~---~~--~~~~~~v~~--- 331 (456)
T 2c1x_A 270 PTSVVYISFGTVTTP-PPAEVVALSEALEAS--RVPFIWSLRDKAR-VHLPE------GFL---EK--TRGYGMVVP--- 331 (456)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHH--TCCEEEECCGGGG-GGSCT------THH---HH--HTTTEEEES---
T ss_pred CcceEEEecCccccC-CHHHHHHHHHHHHhc--CCeEEEEECCcch-hhCCH------HHH---hh--cCCceEEec---
Confidence 344567778887643 334555555444432 3455554433110 00000 011 11 135777777
Q ss_pred CcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECCC--CHHHHH
Q 003947 626 NRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHG-KSGFHIDPY--KGDQAT 697 (784)
Q Consensus 626 ~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg-~~G~li~p~--d~e~lA 697 (784)
+++.. .+++. ++|+||.= +=.++++||+++|+|+|+-...+ .+..+.+. ..|..++.. +.++++
T Consensus 332 -w~pq~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~ 403 (456)
T 2c1x_A 332 -WAPQA---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLM 403 (456)
T ss_dssp -CCCHH---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHH
T ss_pred -CCCHH---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHH
Confidence 55553 45553 36788863 22468999999999999975432 34455555 678887643 567788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
++|.++ +.|++ .++|.+++++.
T Consensus 404 ~~i~~l----l~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 404 SCFDQI----LSQEK-GKKLRENLRAL 425 (456)
T ss_dssp HHHHHH----HHSHH-HHHHHHHHHHH
T ss_pred HHHHHH----HCCCc-HHHHHHHHHHH
Confidence 887654 46775 45666666554
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.007 Score=68.27 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=74.7
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
...++++.|.+...-+.+.+.+++..+.+. +.+++++-+.... ..++ .+.+.... .+++...+
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~--~l~~------~~~~~~~~---~~~~~v~~---- 338 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKK--VFPE------GFLEWMEL---EGKGMICG---- 338 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGG--GSCT------THHHHHHH---HCSEEEES----
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcc--cCCh------hHHHhhcc---CCCEEEEc----
Confidence 445667788876323434455555545442 4566666543200 0001 11111100 24677776
Q ss_pred cCChhHHHHHHH-ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccc-cccCceEEEE-C---CC----C
Q 003947 627 RVRNGELYRYIC-DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEI-IVHGKSGFHI-D---PY----K 692 (784)
Q Consensus 627 ~v~~~el~~~la-~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~Ei-I~dg~~G~li-~---p~----d 692 (784)
+++..+ +++ .++|+||.=. =.++++||+++|+|+|+-...+ .+.. ++.-..|..+ + .. +
T Consensus 339 w~pq~~---vL~h~~~~~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~ 411 (463)
T 2acv_A 339 WAPQVE---VLAHKAIGGFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVA 411 (463)
T ss_dssp SCCHHH---HHHSTTEEEEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCC
T ss_pred cCCHHH---HhCCCccCeEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCcccc
Confidence 555544 454 2477888642 2468999999999999975433 2444 4555688888 2 22 6
Q ss_pred HHHHHHHHHHHH
Q 003947 693 GDQATGILVDFF 704 (784)
Q Consensus 693 ~e~lAe~I~~~l 704 (784)
.++++++|.+++
T Consensus 412 ~~~l~~ai~~ll 423 (463)
T 2acv_A 412 AEEIEKGLKDLM 423 (463)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 778888886443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0071 Score=68.20 Aligned_cols=145 Identities=11% Similarity=0.052 Sum_probs=82.2
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHH-HHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKM-YGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l-~~li~~l~L~~~V~flG~~~ 625 (784)
...++++.|.+... ..+.+.+.+..+.+. +.+++++-+... .+.+ ....++ ..+++...+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~-----------~~~lp~~~~~~--~~~~~~vv~--- 333 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP-----------KEKLPKGFLER--TKTKGKIVA--- 333 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH-----------HHHSCTTHHHH--TTTTEEEES---
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc-----------hhcCCHhHHhh--cCCceEEEe---
Confidence 34456777887643 344555555555442 355665544321 0000 011111 246788877
Q ss_pred CcCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC--CCHHHH
Q 003947 626 NRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHG-KSGFHIDP--YKGDQA 696 (784)
Q Consensus 626 ~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg-~~G~li~p--~d~e~l 696 (784)
+++..++. + .++ +||.=. | -.+++||+++|+|+|+-...+ .+..+.+. ..|..++. -+.+++
T Consensus 334 -w~Pq~~vL---~-h~~v~~fvtH~---G-~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l 404 (454)
T 3hbf_A 334 -WAPQVEIL---K-HSSVGVFLTHS---G-WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESI 404 (454)
T ss_dssp -SCCHHHHH---H-STTEEEEEECC---C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHH
T ss_pred -eCCHHHHH---h-hcCcCeEEecC---C-cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHH
Confidence 66665444 4 466 666532 2 358999999999999975433 34445553 68888864 357778
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
+++|.++ +.+++ .++|++++++.
T Consensus 405 ~~av~~l----l~~~~-~~~~r~~a~~l 427 (454)
T 3hbf_A 405 KKALELT----MSSEK-GGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHH----HSSHH-HHHHHHHHHHH
T ss_pred HHHHHHH----HCCCh-HHHHHHHHHHH
Confidence 8888754 46652 34555555543
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.015 Score=61.30 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=60.6
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+.+++++|.-+...-...+++++. +. .. -.+|.|.+.. ..+++++..++. ++++..++..
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~---~~-~~-i~vv~G~~~~----------~~~~l~~~~~~~---~~v~v~~~~~-- 217 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELP---KT-KI-ISIATSSSNP----------NLKKLQKFAKLH---NNIRLFIDHE-- 217 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSC---TT-SC-EEEEECTTCT----------THHHHHHHHHTC---SSEEEEESCS--
T ss_pred CeEEEEECCCchhhHHHHHHHHhh---cC-CC-EEEEECCCch----------HHHHHHHHHhhC---CCEEEEeCHH--
Confidence 356678888775443334444443 22 22 3455666633 134455555432 4799988544
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 671 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~ 671 (784)
++..+|+. +|++|.+. |.|+.|++++|+|.|.-.
T Consensus 218 ----~m~~~m~~-aDlvI~~g-----G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 218 ----NIAKLMNE-SNKLIISA-----SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp ----CHHHHHHT-EEEEEEES-----SHHHHHHHHTTCCEEEEC
T ss_pred ----HHHHHHHH-CCEEEECC-----cHHHHHHHHcCCCEEEEe
Confidence 58888885 99999852 689999999999999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.13 Score=54.91 Aligned_cols=100 Identities=15% Similarity=0.061 Sum_probs=65.4
Q ss_pred CCEEEEEec-ccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC--C-CCcEEEc
Q 003947 548 KPILFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK--L-NGQFRWI 621 (784)
Q Consensus 548 k~iIl~vGR-L~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~--L-~~~V~fl 621 (784)
+.+++..|. ..+.|... .+.+++..+.+. +++++++|+..+ . +...++.+..+ . ...+.+.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e--------~---~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD--------H---EAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG--------H---HHHHHHHTTSCHHHHTTEEECT
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhh--------H---HHHHHHHHhhhhccccceEecc
Confidence 345666776 55667765 888888888764 689999876522 1 22223333222 0 1234566
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
| ..+..++..+++. +|++|... .|..-+ |.|+|+|+|+-
T Consensus 248 g----~~sl~e~~ali~~-a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 248 G----ETQLDQAVILIAA-CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp T----TSCHHHHHHHHHT-SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred C----cCCHHHHHHHHHh-CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 6 6678899999996 99999874 244434 99999999984
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=91.45 E-value=0.69 Score=49.79 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=67.2
Q ss_pred CCCCCE-EEEEecccCCCCh--HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEc
Q 003947 545 DSSKPI-LFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621 (784)
Q Consensus 545 ~~~k~i-Il~vGRL~~~Kgi--~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~fl 621 (784)
++++++ ++..|.=.+.|.. +.+.+.+..+.+. +.+++++|+..+ .+..+++.+..+ ...+.+.
T Consensus 182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e-----------~~~~~~i~~~~~-~~~~~l~ 247 (349)
T 3tov_A 182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMD-----------LEMVQPVVEQME-TKPIVAT 247 (349)
T ss_dssp CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTT-----------HHHHHHHHHTCS-SCCEECT
T ss_pred CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcch-----------HHHHHHHHHhcc-cccEEee
Confidence 334454 4556654455655 4777887777664 578888876532 122334444444 2346666
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
| ..+..++..+++. +|++|.. + .|..-+ |.|+|+|+|+-
T Consensus 248 g----~~sl~e~~ali~~-a~~~i~~---D-sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 248 G----KFQLGPLAAAMNR-CNLLITN---D-SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp T----CCCHHHHHHHHHT-CSEEEEE---S-SHHHHH-HHTTTCCEEEE
T ss_pred C----CCCHHHHHHHHHh-CCEEEEC---C-CCHHHH-HHhcCCCEEEE
Confidence 6 6778899999996 9999987 2 255555 99999999995
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=88.02 E-value=1.6 Score=45.88 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=63.6
Q ss_pred CCEEEEEecccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 548 KPILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+++..|.=.+.|... .+.+.+..+.+ .+++++++++++ +| .+...++.+.. +++.+.|
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~--~~~~vvl~~g~~-------~e---~~~~~~i~~~~---~~~~l~g--- 240 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLAD--SGIRIKLPWGAP-------HE---EERAKRLAEGF---AYVEVLP--- 240 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTT--TCCEEEECCSSH-------HH---HHHHHHHHTTC---TTEEECC---
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHH--CCCcEEEecCCH-------HH---HHHHHHHHhhC---CcccccC---
Confidence 34556666545556655 77777777755 368888875442 12 22233333332 2466777
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. +|++|..- .|..=+ |.|+|+|+|+-
T Consensus 241 -~~sl~el~ali~~-a~l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 241 -KMSLEGVARVLAG-AKFVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp -CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred -CCCHHHHHHHHHh-CCEEEecC----CcHHHH-HHHcCCCEEEE
Confidence 6778999999996 99999872 255555 77799999984
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=83.13 E-value=3.6 Score=48.73 Aligned_cols=134 Identities=10% Similarity=0.026 Sum_probs=73.0
Q ss_pred hhhhccccCCCCCEEEEEecccCCC----C-----hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHH
Q 003947 537 KEHLCVLKDSSKPILFTMARLDRVK----N-----LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYG 607 (784)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~K----g-----i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~ 607 (784)
++.+|+ ++++++|+|+-...... | +..-++.+.+. ..+++.+++-..- .+..
T Consensus 529 ~~~~~~--~~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~--l~~~~~li~r~Hp---------------~~~~ 589 (729)
T 3l7i_A 529 RTHLNL--PSDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKE--LGDDYVILLRMHY---------------LISN 589 (729)
T ss_dssp HHHTTC--CSSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHH--HTTTEEEEECCCH---------------HHHT
T ss_pred HHHhCC--CCCCeEEEEeeeeeCCccccccccccchhhHHHHHHHH--cCCCeEEEEecCc---------------chhc
Confidence 355676 67899999998765431 1 11112333222 1246776664321 0111
Q ss_pred HHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc---------cccccc
Q 003947 608 LIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN---------GGPAEI 678 (784)
Q Consensus 608 li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~---------GG~~Ei 678 (784)
.....+..+.+.-.. +..++..++. .+|++|. -++-++.|++..++|||.... .|.---
T Consensus 590 ~~~~~~~~~~~~~~~------~~~di~~ll~-~aD~lIT-----DySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d 657 (729)
T 3l7i_A 590 ALDLSGYENFAIDVS------NYNDVSELFL-ISDCLIT-----DYSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN 657 (729)
T ss_dssp TCCCTTCTTTEEECT------TCSCHHHHHH-TCSEEEE-----SSCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC
T ss_pred cccccccCCcEEeCC------CCcCHHHHHH-HhCEEEe-----echHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC
Confidence 111112345555443 1236777777 4999995 356699999999999998622 111111
Q ss_pred cccCceEEEECCCCHHHHHHHHHHH
Q 003947 679 IVHGKSGFHIDPYKGDQATGILVDF 703 (784)
Q Consensus 679 I~dg~~G~li~p~d~e~lAe~I~~~ 703 (784)
..+...|-++ .+.+++.++|.+.
T Consensus 658 ~~~~~pg~~~--~~~~eL~~~i~~~ 680 (729)
T 3l7i_A 658 YMEDLPGPIY--TEPYGLAKELKNL 680 (729)
T ss_dssp TTSSSSSCEE--SSHHHHHHHHTTH
T ss_pred hhHhCCCCeE--CCHHHHHHHHhhh
Confidence 1112234444 4778888888643
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=80.75 E-value=2.5 Score=42.72 Aligned_cols=63 Identities=11% Similarity=0.011 Sum_probs=40.8
Q ss_pred HHHHHHH-ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCCCHHHHHHHHHH
Q 003947 632 ELYRYIC-DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP--------AEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 632 el~~~la-~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~--------~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
++..+|+ . +|++|.=+ =..|+.|++++|+|.|.-..... ++.+.+...++.++ ++.++++|.+
T Consensus 124 ~m~~~l~~~-AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~---~~~L~~~i~~ 195 (224)
T 2jzc_A 124 KMQSIIRDY-SDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCA---PTETGLIAGL 195 (224)
T ss_dssp SHHHHHHHH-CSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEEC---SCTTTHHHHH
T ss_pred hHHHHHHhc-CCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcC---HHHHHHHHHH
Confidence 5778888 7 99999743 35699999999999999754321 22333323456664 3455555553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 784 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 4e-15 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-11 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-11 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 9e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 76.2 bits (186), Expect = 4e-15
Identities = 50/373 (13%), Positives = 109/373 (29%), Gaps = 45/373 (12%)
Query: 383 KPDLIIGNYSDGNIVASLL--AHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQ 440
+PD++ + + + A ++ H + ++I K + F +
Sbjct: 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME 189
Query: 441 FTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIV 500
D + A + TV + + + I + + +
Sbjct: 190 GI-----EYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGI 244
Query: 501 SPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRV 560
G D ++ P + + + ++ + EH + D P+ ++RL
Sbjct: 245 VNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR-IDDDGSPLFCVISRLTWQ 303
Query: 561 KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620
K + + E + + LVV+G L A +
Sbjct: 304 KGIDLMAEAVDEI--VSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHL 361
Query: 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIV 680
+ + + A + P+ +E GLT + A+ G GG A+ ++
Sbjct: 362 MQAGCD----------------AIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVI 405
Query: 681 HGKSGFHIDPYKGDQATGILVDFFE------------KCKVDPGHWDEISQGGLKRIQEK 728
ATG+ + DP W ++ + G+K
Sbjct: 406 DANHAALAS----KAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKS---D 458
Query: 729 YTWKIYSERLLNL 741
+W+ + L
Sbjct: 459 VSWEKSAGLYAAL 471
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 64.9 bits (157), Expect = 2e-11
Identities = 30/229 (13%), Positives = 63/229 (27%), Gaps = 18/229 (7%)
Query: 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE----WYGKNAKLR 577
EI + P+ K + + +F++ RLD K L K +
Sbjct: 228 EPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHH 287
Query: 578 ELVNLVVVGGDRRKESKD-LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRY 636
+ + R + + + + +++ G I+ + + L +
Sbjct: 288 GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKI 347
Query: 637 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF-----ATCNGGPAEIIVHGKSGFHIDPY 691
+ + L + L E + P + G A + S ++PY
Sbjct: 348 FRYS-DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---TSALIVNPY 403
Query: 692 KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740
D+ L L I K + E ++
Sbjct: 404 DRDEVAAALDRALTM---SLAERISRHAEMLDVI-VKNDINHWQECFIS 448
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 63.3 bits (152), Expect = 5e-11
Identities = 59/473 (12%), Positives = 134/473 (28%), Gaps = 71/473 (15%)
Query: 277 TGGQVVYILDQVRALENEMLLRIKQQGLD---ITPRILI-----ITRLLPDAVGTTCGQR 328
GG + AL G + TP I ++
Sbjct: 15 VGGLAEALTAISEAL--------ASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVS 66
Query: 329 VEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLII 388
E+ + I +E+ W + + ++++E + PD++
Sbjct: 67 YEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVH 125
Query: 389 GNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAM 448
+ +L+ + H L +K P + L + + +
Sbjct: 126 FHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP-DIDPEHTGG 184
Query: 449 NRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTI 508
D + T + + +E V NGID + +
Sbjct: 185 YIADIVTTVSRGYLIDEWGFFRNFEGKI-------TYVFNGIDCSFW---------NESY 228
Query: 509 YFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVE 568
+E+++ ++E +F K + L++
Sbjct: 229 LTGSRDERKKSLLSKFGMDE------------------GVTFMFIGRFDRGQKGVDVLLK 270
Query: 569 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628
+ +E + + + + ++ +K + +
Sbjct: 271 AIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKH--------------GNVKVITEM 316
Query: 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688
+ E R + + + P+ +E FGL +EAM G A+ GG +II ++G +
Sbjct: 317 LSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILV 375
Query: 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741
+ ++ E + + KR ++W+ +ER +
Sbjct: 376 KAGDPGELANAILKALEL---SRSDLSKFRENCKKRA-MSFSWEKSAERYVKA 424
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 46.4 bits (108), Expect = 9e-06
Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 4/140 (2%)
Query: 602 MKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM 661
++ + + S ++ + + PA EA G+ ++EA+
Sbjct: 231 FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAI 290
Query: 662 TCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGG 721
T GLP T G A I G I + L + K ++
Sbjct: 291 TAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQ---LNEVLRKALTQSPLRMAWAENA 347
Query: 722 LKRIQEKYTWKIYSERLLNL 741
+ E+ ++
Sbjct: 348 RHYA-DTQDLYSLPEKAADI 366
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 784 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.2 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.14 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.04 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.9 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.57 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.46 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.1 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.05 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.86 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.52 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.52 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.28 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.05 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 96.92 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 87.08 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 81.39 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.2e-41 Score=385.05 Aligned_cols=436 Identities=14% Similarity=0.172 Sum_probs=271.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCC-C----------
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVG-T---------- 323 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g-~---------- 323 (784)
|||++||...+|- -.+||+..++. .|+++|+++||+|+ |+|+.++.... .
T Consensus 1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~~~~~~~~~~~~ 61 (477)
T d1rzua_ 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAAVTDPVKCFEFT 61 (477)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHHCCSCEEEEEES
T ss_pred CEEEEEEEeeecc-------cccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcchhhhcccceEEEEEe
Confidence 8999999876631 14799887777 45667799999999 99865431100 0
Q ss_pred -CcCcceeeec-CcCCeEEEEcc--C--CCCcc-cccccc-cccCChhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCh
Q 003947 324 -TCGQRVEKVY-GTKYSDILRVP--F--RTEEG-IVRKWI-SRFEVWPYLETFTEDVATEIIQEL-QCKPDLIIGNYSDG 394 (784)
Q Consensus 324 -~~~~~~e~v~-~~~~v~IlrvP--~--~~~~~-~~~~~i-sr~~l~~yl~~f~~~~~~~i~~~~-~~~pDIIh~~~~~~ 394 (784)
..+...+... ..+++.++.+. . ....+ +...+. .....+.....|...+.+.+.... ..+|||||+|++.+
T Consensus 62 ~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~ 141 (477)
T d1rzua_ 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA 141 (477)
T ss_dssp CSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH
T ss_pred ccCCceEEEEEEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhH
Confidence 0000000000 01123222221 0 00011 111100 001111112233333333322222 45899999999877
Q ss_pred hHHHHHH--HHhCCCcEEEEecCCcccCCCCCcchhhhccc-------cccccchhhhhHHHhcccCEEEecChHhHhhc
Q 003947 395 NIVASLL--AHKLDVTQCTIAHALELTKYPDSDINWKKLDD-------KYHFSCQFTADLFAMNRTDFIITSTFQEIAGS 465 (784)
Q Consensus 395 ~lva~ll--ar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~-------~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~ 465 (784)
++.+..+ ++..++|+|.|.|++................. ...+......++..+..+|.++++|...++..
T Consensus 142 ~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~ 221 (477)
T d1rzua_ 142 AMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEI 221 (477)
T ss_dssp TTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHH
Confidence 6555544 35567999999998754321111110000000 00111111234557888999999998766532
Q ss_pred cccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccC
Q 003947 466 KDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKD 545 (784)
Q Consensus 466 ~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~ 545 (784)
... +.. +....+ ... ...++.+|+||+|.+.|.|.....-..............+..+.+...++ .+
T Consensus 222 ~~~---~~~---~~~~~~----~~~--~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 288 (477)
T d1rzua_ 222 LTA---EFG---MGLEGV----IGS--RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI-DD 288 (477)
T ss_dssp TSH---HHH---TTCHHH----HHT--TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC-CC
T ss_pred HHH---hcC---cchhhh----hhh--ccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccc-cc
Confidence 211 000 000000 001 14589999999999999875332100000000000000111223344554 35
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+++++|+++||+.+.||++.|++|+.++.+. +++++++|.|+. ....++.++... +.++|.+.|
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~---------~~~~~~~~~~~~--~~~~v~~~~--- 352 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV---------ALEGALLAAASR--HHGRVGVAI--- 352 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH---------HHHHHHHHHHHH--TTTTEEEEE---
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCc---------hHHHHHHHHHhh--cCCeEEEEc---
Confidence 6789999999999999999999999998763 789999999854 222334444444 458899998
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc---------eEEEECCCCHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGK---------SGFHIDPYKGDQA 696 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~---------~G~li~p~d~e~l 696 (784)
..+.+++..+++. +|+||+||.+|+||++++||||||+|||+|+.||++|+|.|+. +|++++|.|++++
T Consensus 353 -~~~~~~~~~~~~~-aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~l 430 (477)
T d1rzua_ 353 -GYNEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGL 430 (477)
T ss_dssp -SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHH
T ss_pred -ccChhHHHHHHHh-CccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHH
Confidence 5556677777884 9999999999999999999999999999999999999998875 8999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|++|.+++ .+.+||+.|++|+++|. .++|||+.++++++++|+.
T Consensus 431 a~ai~~~l-~~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 431 KQAIRRTV-RYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHHHHH-HHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hhhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHH
Confidence 99999877 45679999999999885 3689999999999999975
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.1e-40 Score=368.20 Aligned_cols=410 Identities=14% Similarity=0.136 Sum_probs=275.2
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc------Ccc
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC------GQR 328 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~------~~~ 328 (784)
|||+++|..++|. .+||+..|+. .|+++|+++||+|+ |+|+.++....... ...
T Consensus 1 MkIl~~~~~~pP~--------~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~~~~~~~~~ 60 (437)
T d2bisa1 1 MKVLLLGFEFLPV--------KVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGEE 60 (437)
T ss_dssp CEEEEECSCCTTC--------CSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEEEEECSSSE
T ss_pred CEEEEECCccCCc--------ccCCHHHHHH--------HHHHHHHHcCCEEE----EEecCCCccchhhccceeecccc
Confidence 8999999876621 2799999998 56667799999999 99976543221000 000
Q ss_pred ---eeeecCcCCeEEEEccCCCCc--c-cccccccccCChhhHHHHHHHHHHHHHHHc--CCCceEEEEcCCChhHHHHH
Q 003947 329 ---VEKVYGTKYSDILRVPFRTEE--G-IVRKWISRFEVWPYLETFTEDVATEIIQEL--QCKPDLIIGNYSDGNIVASL 400 (784)
Q Consensus 329 ---~e~v~~~~~v~IlrvP~~~~~--~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~--~~~pDIIh~~~~~~~lva~l 400 (784)
........++++.+++..... . +...| ...+.....|.......+.... ...|||||+|++..++++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~ 137 (437)
T d2bisa1 61 VQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGAL 137 (437)
T ss_dssp EEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHH
T ss_pred cceeeeeeccCCeEEEecCccccccccccccch---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhh
Confidence 001112234555554422110 0 00000 0011111222222222222221 45799999999988999999
Q ss_pred HHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccc
Q 003947 401 LAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSL 480 (784)
Q Consensus 401 lar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~ 480 (784)
+++..++|+|+++|+.....++......... ...........+......+|.+++++.......... |
T Consensus 138 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~---~-------- 205 (437)
T d2bisa1 138 IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGL-SELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGF---F-------- 205 (437)
T ss_dssp HHHHHCCCEEEEESSCCCCCEEHHHHHHTTC-GGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHH---H--------
T ss_pred hhccccCceeEEEeeccccccchhhhhhccc-hhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhh---h--------
Confidence 9999999999999997654322111111111 111112223345667888999999998766421111 1
Q ss_pred ccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccC-
Q 003947 481 PGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDR- 559 (784)
Q Consensus 481 p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~- 559 (784)
..+..|+.+||||+|.+.|.|......+.. .....++++|. .++++|+++||+..
T Consensus 206 ----------~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~i~~~G~~~~~ 261 (437)
T d2bisa1 206 ----------RNFEGKITYVFNGIDCSFWNESYLTGSRDE-----------RKKSLLSKFGM---DEGVTFMFIGRFDRG 261 (437)
T ss_dssp ----------GGGTTTEEECCCCCCTTTSCGGGCCSCHHH-----------HHHHHHHHTTC---CSCEEEEEESCBCSS
T ss_pred ----------ccccCceEEEecccccccccccccchhhHH-----------HHHhhhhhhhc---cCCceEEEeeccccc
Confidence 112679999999999998876421100000 00112334554 56789999999975
Q ss_pred CCChHHHHHHHHHhHcc--CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHH
Q 003947 560 VKNLTGLVEWYGKNAKL--RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYI 637 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~--~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~l 637 (784)
.||++.+++|+..+... .++++|+++|.+++ .....+..+.+. ..+.+.+.| .++.+++..++
T Consensus 262 ~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~---------~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 326 (437)
T d2bisa1 262 QKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---------ELEGWARSLEEK--HGNVKVITE----MLSREFVRELY 326 (437)
T ss_dssp SSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH---------HHHHHHHHHHHT--CTTEEEECS----CCCHHHHHHHH
T ss_pred chhHHHHHhhhcccccccccccceeeeeccccc---------ccccchhhhccc--cccceeccc----cCcHHHHHHHH
Confidence 79999999999987543 47899999998854 111222333332 345566666 67788899999
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Q 003947 638 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEI 717 (784)
Q Consensus 638 a~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m 717 (784)
+. +|++++||..|+||++++|||+||+|||+|+.||..|+++++ +|++++++|++++|++|.+++ ..|++.+++|
T Consensus 327 ~~-adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~~-~G~~~~~~d~~~la~~i~~ll---~~~~~~~~~~ 401 (437)
T d2bisa1 327 GS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL---ELSRSDLSKF 401 (437)
T ss_dssp TT-CSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCTT-TCEEECTTCHHHHHHHHHHHH---TTTTSCTHHH
T ss_pred hh-hccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEECC-cEEEECCCCHHHHHHHHHHHH---hCCHHHHHHH
Confidence 85 999999999999999999999999999999999999998764 899999999999999998554 2578899999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 718 SQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 718 ~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++++.+ ++|||++++++++++|+.
T Consensus 402 ~~~~~~~~-~~~s~~~~a~~~~~iY~~ 427 (437)
T d2bisa1 402 RENCKKRA-MSFSWEKSAERYVKAYTG 427 (437)
T ss_dssp HHHHHHHH-HHSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 99999998 679999999999999974
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.1e-38 Score=338.92 Aligned_cols=364 Identities=15% Similarity=0.215 Sum_probs=248.8
Q ss_pred EEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcC
Q 003947 257 VVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTK 336 (784)
Q Consensus 257 I~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~ 336 (784)
|+++..+++ | .||.++++. +|+++|+++||+|+ |+|+..... ..+
T Consensus 2 i~f~~~~y~---------p-~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-------------~~~ 46 (370)
T d2iw1a1 2 VAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGD-------------CPK 46 (370)
T ss_dssp EEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSC-------------CCT
T ss_pred EEEEecCCC---------C-CCCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCC-------------CCC
Confidence 788877776 2 399999999 66667799999999 998652211 113
Q ss_pred CeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 337 YSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 337 ~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
++.++++|...... ......|...+...+. ...+|+||.+...+++. . ...+..
T Consensus 47 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~---~~~~d~v~~~~~~~~~~-----------~-~~~~~~ 100 (370)
T d2iw1a1 47 AFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLK---EHPADRVVGFNKMPGLD-----------V-YFAADV 100 (370)
T ss_dssp TCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHH---HSCCSEEEESSCCTTCS-----------E-EECCSC
T ss_pred ceEEEEcCcccccc-----------chhhHHHHHHHHHHHH---hcccceeeecccCchHH-----------H-HHHhhc
Confidence 56777877643211 1111233333333333 34899999877654221 0 011110
Q ss_pred cccCCC--CCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 417 ELTKYP--DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 417 ~~~k~~--~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
...... ... ........++....+.........++.+++.+...++...+ ..+++ .
T Consensus 101 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~--~ 158 (370)
T d2iw1a1 101 CYAEKVAQEKG-FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQK-------------------HYQTE--P 158 (370)
T ss_dssp CHHHHHHHHCC-HHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHH-------------------HHCCC--G
T ss_pred ccceeeeeecC-ccccccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHH-------------------hcCCC--c
Confidence 000000 000 00011111111122212223345678888888776652211 12333 6
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.++|||+|.+.+.+......+ ...++.+|+ ++++++++++||+.+.||++.+++|++++.
T Consensus 159 ~~i~vi~~gv~~~~~~~~~~~~~~---------------~~~r~~~~~--~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~ 221 (370)
T d2iw1a1 159 ERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALASLP 221 (370)
T ss_dssp GGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHTSC
T ss_pred ceEEEEEeecccccccccCchhhh---------------hhhhhccCC--CccceEEEEEeccccccchhhhcccccccc
Confidence 689999999998876543211110 122345666 678899999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+..++..++++|++... +.+++++++++..++++|+|.+. ++..+++. +|++|+||..|+||
T Consensus 222 ~~~~~~~~~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-adv~v~ps~~E~~~ 283 (370)
T d2iw1a1 222 ESLRHNTLLFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSGRN------DVSELMAA-ADLLLHPAYQEAAG 283 (370)
T ss_dssp HHHHHTEEEEEESSSCC-----------HHHHHHHHHHTCGGGEEEESCCS------CHHHHHHH-CSEEEECCSCCSSC
T ss_pred cccccceeeeccccccc-----------ccccccccccccccccccccccc------cccccccc-cccccccccccccc
Confidence 77777788888876542 45678899999999999999433 57888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEE-CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI-DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li-~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
++++|||+||+|||+|+.||.+|++.++.+|+++ +|+|+++++++|.++ ++||+.+++|+++|++++ +.|+|..
T Consensus 284 ~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~l----l~d~~~~~~~~~~ar~~~-~~~~~~~ 358 (370)
T d2iw1a1 284 IVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKA----LTQSPLRMAWAENARHYA-DTQDLYS 358 (370)
T ss_dssp HHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHH----HHCHHHHHHHHHHHHHHH-HHSCCSC
T ss_pred ceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHHH-HHhChhH
Confidence 9999999999999999999999999999999765 789999999999854 479999999999999998 5676666
Q ss_pred HHHHHHHHHH
Q 003947 734 YSERLLNLSG 743 (784)
Q Consensus 734 ~a~~ll~ly~ 743 (784)
+.+++.++|.
T Consensus 359 ~~~~~~~ii~ 368 (370)
T d2iw1a1 359 LPEKAADIIT 368 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6677666654
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=6.6e-24 Score=238.53 Aligned_cols=328 Identities=12% Similarity=0.030 Sum_probs=221.6
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
.+.......+... -..-|+|+.|.+...+++..+.++ .+.+++++.|..++. ++.. +.......-+
T Consensus 107 ~vN~~fA~~l~~~-~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~----~~~f--------r~lp~~~~il 173 (456)
T d1uqta_ 107 RVNALLADKLLPL-LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT----PEIF--------NALPTYDTLL 173 (456)
T ss_dssp HHHHHHHHHHGGG-CCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCC----HHHH--------TTSTTHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCC----hHHh--------ccCcchHHHH
Confidence 3334444454443 234599999998886666666554 468889999975432 1111 1111111223
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhh
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSE 525 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~ 525 (784)
..+..+|.|...+...+....+.......... ...+ .....|- ..++.++|+|+|.+.|.+....... ..
T Consensus 174 ~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~-~~~~-~i~~~gr---~v~v~~~p~GID~~~~~~~~~~~~~-----~~ 243 (456)
T d1uqta_ 174 EQLCDYDLLGFQTENDRLAFLDCLSNLTRVTT-RSAK-SHTAWGK---AFRTEVYPIGIEPKEIAKQAAGPLP-----PK 243 (456)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHSCEEE-ETTT-EEEETTE---EEEEEECCCCCCHHHHHHHHHSCCC-----HH
T ss_pred HHhhccccccccCHHHHHHHHHHHHHHhCccc-ccCC-eEEecCc---eeeeeeecCcccchhhhhhcccHHH-----HH
Confidence 46788999999987765433222111100000 0000 0111111 2378899999998876432110000 00
Q ss_pred hHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHHHHHH
Q 003947 526 IEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAE 601 (784)
Q Consensus 526 ~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~ee~~~ 601 (784)
+ ++.... ..++++|+++||+++.||++.+++|+.++.+.+| .+.|+.+|.+.. +...++.+.
T Consensus 244 ~----------~~l~~~--~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~--~~~~~~~~~ 309 (456)
T d1uqta_ 244 L----------AQLKAE--LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR--GDVQAYQDI 309 (456)
T ss_dssp H----------HHHHHH--TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS--TTSHHHHHH
T ss_pred H----------HHHHHh--cCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcc--cchHHHHHH
Confidence 0 000111 3578999999999999999999999999876655 467888887654 223344444
Q ss_pred HHHHHHHHHh-------cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc-----EEE
Q 003947 602 MKKMYGLIDT-------YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-----TFA 669 (784)
Q Consensus 602 ~~~l~~li~~-------l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP-----VIa 669 (784)
..++.+++.+ .+..+.+.+.+ .++..++..+++. +|++++||..||||++++||||||+| +|+
T Consensus 310 ~~ev~~lv~~in~~~~~~~~~~~v~~~~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIl 384 (456)
T d1uqta_ 310 RHQLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVL 384 (456)
T ss_dssp HHHHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEE
T ss_pred HHHHHHHHHHHHhhhccCCCCceeeccC----CcCHHHHhHHHhh-hceeecCCccCCCCcHHHHHHHhCCCCCCCcEEE
Confidence 4444444433 45677788887 7888999999995 99999999999999999999999999 899
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 670 TCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 670 T~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|+.+|+++.+.+ |++++|.|++++|++|.+++ ..+++.++++.+++++++ .+||+...++.+++-++
T Consensus 385 S~~~G~~~~l~~---g~lVnP~d~~~~A~ai~~aL---~~~~~er~~~~~~~~~~v-~~~~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 385 SQFAGAANELTS---ALIVNPYDRDEVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLK 451 (456)
T ss_dssp ETTBGGGGTCTT---SEEECTTCHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHH
T ss_pred eCCCCCHHHhCC---eEEECcCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH
Confidence 999999999954 79999999999999998654 357889999999999999 67999999998877654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=2.3e-24 Score=214.30 Aligned_cols=170 Identities=15% Similarity=0.202 Sum_probs=139.8
Q ss_pred hhhhccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhHc--cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 537 KEHLCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNAK--LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~--~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
++++|+ +++++|+|+||++ ++||++.+++|++.+.+ ..++++|+|+|.|.+ + .......+.+.+
T Consensus 24 ~~~~~l---~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~------~---~~~~~~~~~~~~- 90 (196)
T d2bfwa1 24 LSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP------E---LEGWARSLEEKH- 90 (196)
T ss_dssp HHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH------H---HHHHHHHHHHHC-
T ss_pred HHHhCC---CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeeccc------c---hhhhhhhhhhcc-
Confidence 456776 5788899999997 58999999999999854 357899999998743 1 112233333333
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG 693 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~ 693 (784)
...+.+.| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.+ .+|++++|+|+
T Consensus 91 -~~~~~~~~----~~~~~~l~~~~~~-~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~ 163 (196)
T d2bfwa1 91 -GNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDP 163 (196)
T ss_dssp -TTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCH
T ss_pred -ceeEEeee----ccccccchhcccc-ccccccccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCCH
Confidence 34556666 6778899999995 99999999999999999999999999999999999999866 58999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
++++++|.+++. .+++.+++|+++|++++ .+||
T Consensus 164 ~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a-~~fs 196 (196)
T d2bfwa1 164 GELANAILKALE---LSRSDLSKFRENCKKRA-MSFS 196 (196)
T ss_dssp HHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HhCC
Confidence 999999986553 58999999999999998 5575
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=2e-21 Score=188.02 Aligned_cols=151 Identities=20% Similarity=0.301 Sum_probs=122.8
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
..++|+||+.+.||++.+++|++++ ++.+++|+|.+.+. ...+.+.+.+.+.. .++|+|+| .+
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~--------~~~~~~~~~~~~~~-~~~v~~~g----~~ 75 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKG--------DHAERYARKIMKIA-PDNVKFLG----SV 75 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTT--------STHHHHHHHHHHHS-CTTEEEEE----SC
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccc--------cchhhhhhhhcccc-cCcEEEee----cc
Confidence 5578999999999999999999887 45799999987652 11233444444443 46899999 77
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhc
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCK 708 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll 708 (784)
+.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++
T Consensus 76 ~~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~---- 149 (166)
T d2f9fa1 76 SEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS---- 149 (166)
T ss_dssp CHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH----
T ss_pred ccccccccccc-ccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH----
Confidence 78999999995 99999999999999999999999999999999999999999999998875 8999999998665
Q ss_pred CCHHHHHHHHHHHHHHH
Q 003947 709 VDPGHWDEISQGGLKRI 725 (784)
Q Consensus 709 ~dp~~~~~m~~~a~~~v 725 (784)
+|++. +++++++++
T Consensus 150 ~~~~~---~~~~~~~~a 163 (166)
T d2f9fa1 150 KNPDK---FKKDCFRRA 163 (166)
T ss_dssp HCTTT---THHHHHHHH
T ss_pred hCHHH---HHHHHHHHH
Confidence 46542 334444444
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.20 E-value=2.7e-10 Score=120.89 Aligned_cols=79 Identities=18% Similarity=0.090 Sum_probs=59.3
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCce
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG--------PAEIIVHGKS 684 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG--------~~EiI~dg~~ 684 (784)
...++|.+.| +++..++ ++ .+|+||..+- ..|+.|||++|+|+|+....+ .++.+.+...
T Consensus 267 ~~~~~v~i~~----~~p~~~l---l~-~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~ 334 (391)
T d1pn3a_ 267 DDGADCFVVG----EVNLQEL---FG-RVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGV 334 (391)
T ss_dssp SCCTTCCEES----SCCHHHH---HT-TSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTS
T ss_pred cCCCCEEEec----ccCHHHH---Hh-hccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCC
Confidence 3467899998 6665555 44 5899998742 468999999999999976554 2556666668
Q ss_pred EEEECCCC--HHHHHHHHHHH
Q 003947 685 GFHIDPYK--GDQATGILVDF 703 (784)
Q Consensus 685 G~li~p~d--~e~lAe~I~~~ 703 (784)
|..++..+ +++++++|.++
T Consensus 335 g~~l~~~~~~~~~l~~~i~~~ 355 (391)
T d1pn3a_ 335 GVAVDGPVPTIDSLSAALDTA 355 (391)
T ss_dssp EEEECCSSCCHHHHHHHHHHH
T ss_pred EEEcCcCCCCHHHHHHHHHHH
Confidence 99998765 78899999744
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=3.1e-09 Score=111.24 Aligned_cols=111 Identities=12% Similarity=-0.010 Sum_probs=75.7
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---c----cccccccCceEEE
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG---G----PAEIIVHGKSGFH 687 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G---G----~~EiI~dg~~G~l 687 (784)
..++...++.. ++..+++. +|++|.-+ =+.|+.||++||+|+|+.... | .++.+++-..|+.
T Consensus 230 ~~~~~v~~f~~------~~~~lm~~-adl~It~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~ 298 (351)
T d1f0ka_ 230 QPQHKVTEFID------DMAAAYAW-ADVVVCRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKI 298 (351)
T ss_dssp CTTSEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEE
T ss_pred cccceeeeehh------hHHHHHHh-Cchhhccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEE
Confidence 45566666433 46777885 99999753 137899999999999986432 1 1445555568888
Q ss_pred ECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 688 IDPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 688 i~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
++..+ .+.+.++|. .+ +++.+.+|++++++.. ..-.++.+++.++++.+
T Consensus 299 ~~~~~~~~e~l~~~l~----~l--~~~~~~~~~~~~~~~~-~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 299 IEQPQLSVDAVANTLA----GW--SRETLLTMAERARAAS-IPDATERVANEVSRVAR 349 (351)
T ss_dssp CCGGGCCHHHHHHHHH----TC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHT
T ss_pred echhhCCHHHHHHHHH----hh--CHHHHHHHHHHHHccC-CccHHHHHHHHHHHHHh
Confidence 86443 445555543 33 7788889999888653 44568888888888754
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.04 E-value=1.5e-09 Score=115.30 Aligned_cols=110 Identities=13% Similarity=0.002 Sum_probs=73.4
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEE
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHI 688 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li 688 (784)
.+.++|++.+ +++..++. . .+|+||. .+-..++.||+++|+|+|+....+ ..+.+++...|..+
T Consensus 283 ~~~~~v~~~~----~~p~~~ll---~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l 350 (401)
T d1rrva_ 283 DDRDDCFAID----EVNFQALF---R-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (401)
T ss_dssp CCCTTEEEES----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCcHHHh---h-hccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc
Confidence 4578999998 66665554 4 4899996 466789999999999999986665 45566666689999
Q ss_pred CCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 689 DPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 689 ~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
+..+ ++.++++|.+ ++ +|+.+++..+ ..+++ ..=.....++.+++.
T Consensus 351 ~~~~~~~~~L~~ai~~----vl-~~~~r~~a~~-~~~~~-~~~g~~~aa~~ie~~ 398 (401)
T d1rrva_ 351 DGPTPTFESLSAALTT----VL-APETRARAEA-VAGMV-LTDGAAAAADLVLAA 398 (401)
T ss_dssp SSSCCCHHHHHHHHHH----HT-SHHHHHHHHH-HTTTC-CCCHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHH----Hh-CHHHHHHHHH-HHHHH-hhcCHHHHHHHHHHH
Confidence 8764 7888888874 44 5665544322 11222 112345555555544
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.90 E-value=4.3e-08 Score=103.28 Aligned_cols=79 Identities=16% Similarity=0.015 Sum_probs=59.3
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEE
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHI 688 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li 688 (784)
...++|++.+ +++..++ +. .+|+||. .+-..++.||+++|+|+|+....+ .++.+++...|..+
T Consensus 282 ~~~~nv~~~~----~~p~~~~---l~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l 349 (401)
T d1iira_ 282 DDGADCFAIG----EVNHQVL---FG-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH 349 (401)
T ss_dssp SCGGGEEECS----SCCHHHH---GG-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCHHHH---Hh-hcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc
Confidence 3567899998 6665554 44 4899995 577889999999999999965444 45556665689998
Q ss_pred CCC--CHHHHHHHHHHH
Q 003947 689 DPY--KGDQATGILVDF 703 (784)
Q Consensus 689 ~p~--d~e~lAe~I~~~ 703 (784)
+.. ++++++++|.++
T Consensus 350 ~~~~~~~~~l~~ai~~~ 366 (401)
T d1iira_ 350 DGPIPTFDSLSAALATA 366 (401)
T ss_dssp SSSSCCHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHH
Confidence 776 588888888743
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.57 E-value=8e-07 Score=102.81 Aligned_cols=144 Identities=12% Similarity=0.008 Sum_probs=107.0
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHHHHH----HHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVE----WYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~Lie----A~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|..-+++...++++-|+..+|..+.++. .+..++.. ...+.+++.|...+. |...++.++.+.+++
T Consensus 516 ~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~---d~~gK~iIk~I~~va 592 (796)
T d1l5wa_ 516 VRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVA 592 (796)
T ss_dssp HHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT---CHHHHHHHHHHHHHH
T ss_pred HhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCc---hHHHHHHHHHHHHHH
Confidence 3445555789999999999999999888543 33344332 124788888877653 555666666666666
Q ss_pred HhcC----C--CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DTYK----L--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~l~----L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+..+ + ..+|.|+. ..+. .+.+.+-.++||-.+.+. .|+.|.+-+=||.-|.+.++|-.|...|+.++
T Consensus 593 ~~in~dp~~~~~~kVVFle----nYdv-~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~ 667 (796)
T d1l5wa_ 593 DVINNDPLVGDKLKVVFLP----DYCV-SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK 667 (796)
T ss_dssp HHHHTCTTTGGGEEEEECS----SCCH-HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHhcCChhhccceeEEEeC----CCch-HHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHh
Confidence 5332 2 23789986 3333 566666667999999887 89999999999999999999999999998875
Q ss_pred --CceEEEEC
Q 003947 682 --GKSGFHID 689 (784)
Q Consensus 682 --g~~G~li~ 689 (784)
++|||.|-
T Consensus 668 vg~eN~f~fG 677 (796)
T d1l5wa_ 668 VGEENIFIFG 677 (796)
T ss_dssp HCGGGSEECS
T ss_pred cCccceEEec
Confidence 78999994
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.46 E-value=2.8e-06 Score=98.30 Aligned_cols=144 Identities=15% Similarity=0.081 Sum_probs=107.6
Q ss_pred hhccccCCCCCEEEEEecccCCCChHH----HHHHHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTG----LVEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID 610 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~----LieA~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~ 610 (784)
+.|+.-+++...++++-|+..+|.... ++..+.++++. ...+.+++.|...+ .|...++.++.+.++++
T Consensus 541 ~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP---~d~~gK~iIk~I~~va~ 617 (824)
T d2gj4a1 541 EYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAP---GYHMAKMIIKLITAIGD 617 (824)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCT---TCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCC---ccHHHHHHHHHHHHHHH
Confidence 445555889999999999999999988 33445555542 12478888887665 35556666777776666
Q ss_pred hcCCC------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003947 611 TYKLN------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH- 681 (784)
Q Consensus 611 ~l~L~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d- 681 (784)
-.+.. .+|.|+. ..+. .+.+.+-.++|+..+.|. .|+.|..-+=||.-|.++++|-.|...|+.++
T Consensus 618 ~in~dp~~~~~lkVvFle----nY~v-~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~v 692 (824)
T d2gj4a1 618 VVNHDPVVGDRLRVIFLE----NYRV-SLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEA 692 (824)
T ss_dssp HHTTCTTTGGGEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHH
T ss_pred HHhcChhhccceeEEEcC----CCch-HHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhc
Confidence 43332 2688986 3344 455666557999999887 89999999999999999999999999998875
Q ss_pred -CceEEEECC
Q 003947 682 -GKSGFHIDP 690 (784)
Q Consensus 682 -g~~G~li~p 690 (784)
++|||.|-.
T Consensus 693 g~~N~~~fG~ 702 (824)
T d2gj4a1 693 GEENFFIFGM 702 (824)
T ss_dssp CGGGSEECSC
T ss_pred CcccEEEeCC
Confidence 789999853
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.10 E-value=0.00026 Score=75.22 Aligned_cols=252 Identities=12% Similarity=0.033 Sum_probs=154.8
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|..+.-.. .+.++++|...++|+++ +|+-..+. ++.-...+...+ ...-+-||.-+|+|+
T Consensus 86 ~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg----~~~~~~~de~~R--------~~iskls~~hf~~t~ 152 (373)
T d1v4va_ 86 EMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSG----NLKEPFPEEANR--------RLTDVLTDLDFAPTP 152 (373)
T ss_dssp HTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCS----CTTSSTTHHHHH--------HHHHHHCSEEEESSH
T ss_pred hcCcccccccccCccchhHHHHHHHhhhhhee-eccccccc----ccccCcchhhhh--------hhhccccceeeecch
Confidence 35899999876544 66778888999999765 34321110 110001112121 123446899999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
...+.+.. .|.+ +.++.++.+ ++|. -..... + ...
T Consensus 153 ~~~~~L~~--------------------~Ge~--~~~I~~vG~p~~D~---------i~~~~~--------~-----~~~ 188 (373)
T d1v4va_ 153 LAKANLLK--------------------EGKR--EEGILVTGQTGVDA---------VLLAAK--------L-----GRL 188 (373)
T ss_dssp HHHHHHHT--------------------TTCC--GGGEEECCCHHHHH---------HHHHHH--------H-----CCC
T ss_pred hhhhhhhh--------------------hccc--ccceeecccchhhH---------HHhhhh--------h-----ccc
Confidence 77663222 2443 557777654 2221 110000 0 000
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.... ..++++++++-|-...++...+.+++..+.+...++.+++...... .....+. +......++
T Consensus 189 ~~~~--~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~---------~~~~~~~---~~~~~~~n~ 254 (373)
T d1v4va_ 189 PEGL--PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP---------VVREAVF---PVLKGVRNF 254 (373)
T ss_dssp CTTC--CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH---------HHHHHHH---HHHTTCTTE
T ss_pred cccc--ccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc---------cchhhhh---hhhcccccc
Confidence 1111 3456677888887777788888888888888777888877654321 1111222 233445689
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
.++. .++..+...++.. +++++--| |-.+.||.++|+|+|.- +.|.-.+-++.|.+ .++ +.|.+++.
T Consensus 255 ~~~~----~l~~~~~l~ll~~-s~~vignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv-~~d~~~I~ 322 (373)
T d1v4va_ 255 VLLD----PLEYGSMAALMRA-SLLLVTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLA-GTDPEGVY 322 (373)
T ss_dssp EEEC----CCCHHHHHHHHHT-EEEEEESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EEC-CSCHHHHH
T ss_pred eeec----cchHHHHHHHhhh-ceeEeccc-----chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEc-CCCHHHHH
Confidence 9987 7888899999985 76666544 67788999999999987 55666776666644 444 45888887
Q ss_pred HHHHHHHHHhcCCHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQ 719 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~ 719 (784)
.++. +++.++..+.++..
T Consensus 323 ~~i~----~~l~~~~~~~~~~~ 340 (373)
T d1v4va_ 323 RVVK----GLLENPEELSRMRK 340 (373)
T ss_dssp HHHH----HHHTCHHHHHHHHH
T ss_pred HHHH----HHHcCHHHHhhccc
Confidence 7776 45578887776643
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.05 E-value=0.00011 Score=78.01 Aligned_cols=87 Identities=16% Similarity=0.005 Sum_probs=54.1
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEII-VHGKSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI-~dg~~G~li~ 689 (784)
.+++.... +.+..++. ... .+++||.= |=..++.||+.+|+|+|+.... ..+.-+ +....|+.++
T Consensus 329 ~~n~~v~~----~~pq~~~l-~~p-~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~ 398 (461)
T d2acva1 329 EGKGMICG----WAPQVEVL-AHK-AIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 398 (461)
T ss_dssp HCSEEEES----SCCHHHHH-HST-TEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCCeEEEe----cCCHHHHH-hcc-cCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEee
Confidence 35565554 34444433 223 47889874 3345899999999999997433 344443 5556788876
Q ss_pred CC--------CHHHHHHHHHHHHHHhcC-CHHHHH
Q 003947 690 PY--------KGDQATGILVDFFEKCKV-DPGHWD 715 (784)
Q Consensus 690 p~--------d~e~lAe~I~~~l~~ll~-dp~~~~ 715 (784)
.. +.++++++|.+ +++ |+.+++
T Consensus 399 ~~~~~~~~~~t~~~l~~a~~~----vl~~d~~~r~ 429 (461)
T d2acva1 399 VDYRKGSDVVAAEEIEKGLKD----LMDKDSIVHK 429 (461)
T ss_dssp SSCCTTCCCCCHHHHHHHHHH----HTCTTCTHHH
T ss_pred ccccccCCccCHHHHHHHHHH----HhhCCHHHHH
Confidence 43 46778888774 454 454544
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.86 E-value=0.00034 Score=74.37 Aligned_cols=86 Identities=14% Similarity=0.046 Sum_probs=57.1
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIV-HGKSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~-dg~~G~li~ 689 (784)
.+++.... +++..++.. .. .+++||.- |=..++.||+.+|+|+|+....+ .+.-++ ....|..++
T Consensus 318 ~~nv~~~~----~~pq~~lL~-hp-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 318 RGYGMVVP----WAPQAEVLA-HE-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred cccccccc----cCChHhhhc-cC-ceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 45777776 555555442 12 46788864 33458999999999999985544 334454 446899887
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHH
Q 003947 690 PY--KGDQATGILVDFFEKCKVDPGHW 714 (784)
Q Consensus 690 p~--d~e~lAe~I~~~l~~ll~dp~~~ 714 (784)
.. +.+++.++|.+ +++|+.++
T Consensus 388 ~~~~t~~~l~~ai~~----vL~d~~y~ 410 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQ----ILSQEKGK 410 (450)
T ss_dssp GGSCCHHHHHHHHHH----HHHSHHHH
T ss_pred CCCcCHHHHHHHHHH----HhcCcHHH
Confidence 65 56777777764 55688653
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.52 E-value=0.0042 Score=65.64 Aligned_cols=252 Identities=12% Similarity=0.047 Sum_probs=134.2
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+|..+.-.. .+.++.+|..+++|+++ +|+-+.+. +..+...+...|. ..-.-||..+|+|+.
T Consensus 87 ~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~----~~~~~~~de~~R~--------~iskls~~hf~~t~~ 153 (377)
T d1o6ca_ 87 IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTG----NKYSPFPEELNRQ--------MTGAIADLHFAPTGQ 153 (377)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCS----CTTTTTTHHHHHH--------HHHHHCSEEEESSHH
T ss_pred cccceeEeeecccccchhhhhhhhccceEEE-Eecccccc----cccccCchhhhcc--------ccccceeEEeecchh
Confidence 3899999876554 67888999999999754 44432221 1111112222221 234568999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+.+.. -|.+ +.++.++.+- +|. -..... .......
T Consensus 154 ~~~~L~~--------------------~G~~--~~~I~~vG~~~~D~---------i~~~~~-----------~~~~~~~ 191 (377)
T d1o6ca_ 154 AKDNLLK--------------------ENKK--ADSIFVTGNTAIDA---------LNTTVR-----------DGYSHPV 191 (377)
T ss_dssp HHHHHHH--------------------TTCC--GGGEEECCCHHHHH---------HHHHCC-----------SSCCCST
T ss_pred hhhhhhh--------------------hccc--cceEeeccchhHHH---------HHHHHH-----------HHHhhhh
Confidence 7653222 2444 5677777652 321 110000 0000011
Q ss_pred hccccCCCCCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 540 LCVLKDSSKPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
+..+ ..++.++++.-|.... +.....+..+..+.....+..+++.....+ .......+.+...++|
T Consensus 192 ~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~~~~~~ni 258 (377)
T d1o6ca_ 192 LDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNP------------VVREAAHKHFGDSDRV 258 (377)
T ss_dssp TTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----C------------HHHHHHHHC--CCSSE
T ss_pred hhhc-cCCceEEEEeccccccccchHHHHHHHHhhccccccccccccccccc------------ccchhhhhccccccce
Confidence 1111 2344556666665433 333444455544444456666665543322 1112222334556789
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
.++. .++..+...++.. +++++-=| |-.+.||-..|+|+|.-.. +.-.+-+..|.+ +++++ |.+++.
T Consensus 259 ~~~~----~l~~~~fl~llk~-s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-ilv~~-~~~~I~ 326 (377)
T d1o6ca_ 259 HLIE----PLEVIDFHNFAAK-SHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KLAGT-DEENIY 326 (377)
T ss_dssp EECC----CCCHHHHHHHHHH-CSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTSS-EEECS-CHHHHH
T ss_pred Eecc----ccchHHHHHHHhh-hheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhcCee-EECCC-CHHHHH
Confidence 9997 7888999999996 77777433 4468899999999998643 335566656644 55665 777777
Q ss_pred HHHHHHHHHhcCCHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEI 717 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m 717 (784)
+++. +++.++..++.+
T Consensus 327 ~~i~----~~l~~~~~~~~~ 342 (377)
T d1o6ca_ 327 QLAK----QLLTDPDEYKKM 342 (377)
T ss_dssp HHHH----HHHHCHHHHHHH
T ss_pred HHHH----HHHhChHHHhhh
Confidence 7775 445687766654
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.52 E-value=0.0036 Score=66.03 Aligned_cols=94 Identities=13% Similarity=0.123 Sum_probs=61.9
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEII-VHGKSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI-~dg~~G~li~ 689 (784)
.+||.... +++..++.. .. .+++||.= |=..++.||+.+|+|+|+.... ....-+ +....|..++
T Consensus 345 ~~Nv~~~~----~~Pq~~lL~-hp-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIAS----WCPQDKVLN-HP-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred cCceEEee----eCCHHHHhc-CC-cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 56888876 666666541 02 36788864 3345899999999999997443 344444 4436899888
Q ss_pred CC-CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 690 PY-KGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 690 p~-d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.+ +.++++++|.+ ++.||.. +++.++|.+
T Consensus 415 ~~~t~~~l~~ai~~----vl~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 415 TNVKREELAKLINE----VIAGDKG-KKMKQKAME 444 (473)
T ss_dssp SSCCHHHHHHHHHH----HHTSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHH----HHcCChH-HHHHHHHHH
Confidence 54 57788888874 5578863 345555544
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.28 E-value=0.019 Score=60.28 Aligned_cols=85 Identities=9% Similarity=0.079 Sum_probs=56.2
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEE
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEII-VHGKSGFHI 688 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI-~dg~~G~li 688 (784)
..++|...+ ++|..++... . .+++||.= -| ..++.||+.+|+|+|+...-+ .+..+ +.-..|..+
T Consensus 332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVtH---GG-~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l 401 (471)
T d2vcha1 332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLTH---CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 401 (471)
T ss_dssp TTTEEEEES----CCCHHHHHHS-T-TEEEEEEC---CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred cCCCeeecc----cCCHHHHhcC-c-cCCEEEec---CC-ccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEE
Confidence 357898887 7777776541 1 36788863 23 458999999999999974432 34444 333467766
Q ss_pred CCC-----CHHHHHHHHHHHHHHhcCCHH
Q 003947 689 DPY-----KGDQATGILVDFFEKCKVDPG 712 (784)
Q Consensus 689 ~p~-----d~e~lAe~I~~~l~~ll~dp~ 712 (784)
... +.++++++|.++ ++|++
T Consensus 402 ~~~~~~~~t~~~l~~ai~~v----l~~~~ 426 (471)
T d2vcha1 402 RAGDDGLVRREEVARVVKGL----MEGEE 426 (471)
T ss_dssp CCCTTSCCCHHHHHHHHHHH----HTSTH
T ss_pred ecCCCCcCCHHHHHHHHHHH----hCCcH
Confidence 543 567788888754 46764
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.014 Score=61.45 Aligned_cols=259 Identities=11% Similarity=0.060 Sum_probs=141.6
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+|..+.-.. .+.++.+|..+++|+++ +|+-+.+ .+..+...+...|. ..-.-||.-+|+++.
T Consensus 85 ~kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s----~~~~~~~pde~~R~--------~iskls~~hf~~~~~ 151 (376)
T d1f6da_ 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRT----GDLYSPWPEEANRT--------LTGHLAMYHFSPTET 151 (376)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCC----SCTTSSTTHHHHHH--------HHHHTCSEEEESSHH
T ss_pred ccCcceeeeccccchhhHHHHHHhhCceEEE-Eeccccc----ccccccCchhhhhh--------hhccceeEEEeccHH
Confidence 3899998876444 77888889999999754 4543221 11111122232221 234568888899987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+.+.+ -|.+ +.++.++.+ ++|.-.. ...+.... .. +..... ..
T Consensus 152 ~~~~L~~--------------------~G~~--~~~I~~vG~~~~D~l~~-----~~~~~~~~-~~-----~~~~~~-~~ 197 (376)
T d1f6da_ 152 SRQNLLR--------------------ENVA--DSRIFITGNTVIDALLW-----VRDQVMSS-DK-----LRSELA-AN 197 (376)
T ss_dssp HHHHHHH--------------------TTCC--GGGEEECCCHHHHHHHH-----HHHHTTTC-HH-----HHHHHH-TT
T ss_pred HHhHHHh--------------------cCCC--ccccceecCchHHHHHH-----HHhhhhcc-ch-----hhhhhh-cc
Confidence 7653222 2444 667777754 3332000 00000000 00 000000 01
Q ss_pred hccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 540 LCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.+.....++.++++.=|.. ..+++..++.++..+.+...++.+++-..... ...... .+......++
T Consensus 198 ~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~---------~~~~~~---~~~~~~~~ni 265 (376)
T d1f6da_ 198 YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP---------NVREPV---NRILGHVKNV 265 (376)
T ss_dssp CTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH---------HHHHHH---HHHHTTCTTE
T ss_pred ccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccch---------hhhhhH---hhhhcccccc
Confidence 1111122334455444443 34556777788877777667777776653311 111111 2223445689
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
.++. .+...+...++.. +++++-=| |-.+.||-..|+|+|.-.. ..-++-+..| +-.++++ |.+++.
T Consensus 266 ~~~~----~l~~~~fl~ll~~-a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~~~I~ 333 (376)
T d1f6da_ 266 ILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIV 333 (376)
T ss_dssp EEEC----CCCHHHHHHHHHH-CSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SHHHHH
T ss_pred eeec----cccHHHHHHHHhh-ceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-CHHHHH
Confidence 9987 6778888888885 77777544 5567899999999997532 2234555444 5566654 788888
Q ss_pred HHHHHHHHHhcCCHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWD 715 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~ 715 (784)
+++.+.+ .++..+.
T Consensus 334 ~ai~~~l----~~~~~~~ 347 (376)
T d1f6da_ 334 EEVTRLL----KDENEYQ 347 (376)
T ss_dssp HHHHHHH----HCHHHHH
T ss_pred HHHHHHH----hChHhhh
Confidence 8886444 5665443
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=87.08 E-value=0.62 Score=46.59 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=63.5
Q ss_pred CCCCCEEE-EEe-cccCCCC--hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC---CCCc
Q 003947 545 DSSKPILF-TMA-RLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK---LNGQ 617 (784)
Q Consensus 545 ~~~k~iIl-~vG-RL~~~Kg--i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~---L~~~ 617 (784)
..+++.|+ ..| +-.+.|. .+..++...++.+. +..++++|+..+ . +....+.+... ...-
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e--------~---~~~~~~~~~~~~~~~~~~ 243 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD--------H---EAGNEILAALNTEQQAWC 243 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG--------H---HHHHHHHTTSCHHHHTTE
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccch--------H---HHHHHHHHhhhccccccc
Confidence 34555544 443 3334455 34577777777663 567888886532 1 11222222221 1233
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
+.+.| ..+-.++..++.. +|++|.+. +-.+--|.++|+|+|+=
T Consensus 244 ~~l~g----~~sl~el~~li~~-a~l~I~~D-----tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 244 RNLAG----ETQLDQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EECTT----TSCHHHHHHHHHT-SSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred ccccC----CccHHHHHHHHhc-ceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence 44555 6678899999996 99999874 34668899999999984
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=81.39 E-value=2.6 Score=40.06 Aligned_cols=40 Identities=38% Similarity=0.653 Sum_probs=25.5
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecC
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
||||++|++|.- ..++| .||. | ..++++|++|. ++++|..
T Consensus 1 m~~VLvi~aHPD---De~lg---~GGt--------------i-ak~~~~G~~V~--vv~~T~G 40 (227)
T d1uana_ 1 MLDLLVVAPHPD---DGELG---CGGT--------------L-ARAKAEGLSTG--ILDLTRG 40 (227)
T ss_dssp CEEEEEEESSTT---HHHHH---HHHH--------------H-HHHHHTTCCEE--EEEEECC
T ss_pred CceEEEEEeCCC---hHHHH---HHHH--------------H-HHHHHcCCeEE--EEEEeCC
Confidence 589999999963 22333 3442 1 23578999998 4555543
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