Citrus Sinensis ID: 003977

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780--
MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKHTTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
cccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccEEEEEEcccccEEEEEEEcccccccccccccEEEEEccccccccccEEEEEEccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHccccHHHHHHccccEEEccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccEEccccccccccEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHccccccccccccccHHHHHHHHccccccccEEEcccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEEEcccccEEEEEEccccccEEEEccccccccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEc
cccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEcccEEEEEcccHccccccccccccccccccccccccEEcccccccccccEccccEEEEEEEccccEEEEEEEccccccccccccccEEEEEcccccccccEEEEEEcccccccEEEEEEEcccccccccccccccEEEEccHHHHEcccccccccccccccccccEEEEcccccccccccccccccccEEEEEEEEccccccccccccHHccccHHHHHcHHHHHHHccccEEEEccEEEEcccccccccccccccEccccccEcccccEcHHHcccEEcccEEHHHHHHHHHHHHccccEEEEEEcccEcccccccccEEEEEEcccccEEcEccccccEcccccccccEccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHccccccccccHHHHHHHcccHHHcEEEEEcccccccccEccccccccccHHHccccHHHHHHHHcccccHHHHHHHHHcccHHHHHHHcccHHHEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHccccccccccccccccccEEccHcccHHcHHHHHHHHHHHHHHHHcccccccHccccccEEEEccccccccccEEEEEEccccccEEEEEEEcccccEEEEccccccccEEEEEEEcccccccccccccccccccEEEEcccEEEEEEEc
mkafegtmmihqplpalsnstklllfaptfshklcrsfsaaspahemglrlskkassgntprhfnktsssvkhttpsaynqptqervleeesprvsettlplktsqgqafpigvsevenGINFAIFSQHATAVTLCLslpkrekldwqdggmielpldprvnktgdiwhiciedlprsevlygyrvdgprdwhqghrfdssivlidpyaklvegrrHFGDASAKLSKFLGtyefeslpfdwgdnyklpnipekdlVIYEMNVraftgdessgldpeirgSYLGLIQKIPHLLELGINAvellpvfefdemefqrrrnprdhmvntwgystinffspmsryaaggggplkASWEFKEMVKALHGAGIEVILDVVYNhtneaddanpyttsfrgidnkvYYMVDGTGqllnyagcgntlncnhPVVMELILDSLRHWVVEYHVDGFRFDLASVlcrgtdgsplnappLIRAIAKDAILSRCKIiaepwdcrglylvgkfpnwdrwaewNGKYRDDLRkfikgdpgmkGILATRisgssdlyrvnkrkpyhsinfiiahdgftlyDLVSynykhneangeggndgcndnfswncgfegetdDASIKALRSRQMKNFHLALMVsqgtpmmlmgdeyghtrygnnnsyghdtainnfqwgqletkknshYRFFSEVIKFRQsrrvfgredflnindvtwhednwdnydSKFLAFTLHDNNGADIYLAFNahdffvkvslpppppkrqwfrvvdtnlespddivpegaagtgstynlspyssilleak
MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSkkassgntprhfnktsssvkhttpsaynqptqervleeesprvsettlplktsqgqaFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMielpldprvnkTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRaftgdessgldPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQrrrnprdhmvnTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNeaddanpyttsfrgiDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIaepwdcrglylVGKFPNWDRWAEWNGKYRDDLRKfikgdpgmkgilatrisgssdlyRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEangeggndgcNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKfrqsrrvfgredFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLespddivpegaagtgstynlspyssilleak
MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKHTTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHneangeggndgcndnFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
*******************STKLLLFAPTFSHKLCRS***********************************************************************AFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKV**************************************************
******TMMIHQ********************************************************************************************SQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLS*************************************************LKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
****EGTMMIHQPLPALSNSTKLLLFAPTFS***CRS*SAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKHTTPSAYNQPTQE**************LPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHN*************N*SW*CGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKHTTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query782 2.2.26 [Sep-21-2011]
Q9M0S5764 Isoamylase 3, chloroplast yes no 0.974 0.997 0.731 0.0
O04196783 Isoamylase 1, chloroplast no no 0.861 0.860 0.454 1e-167
P0A4Y4721 Glycogen operon protein G yes no 0.791 0.858 0.423 1e-126
P0A4Y5721 Glycogen operon protein G yes no 0.791 0.858 0.423 1e-126
A8GKU9661 Glycogen debranching enzy yes no 0.681 0.806 0.427 1e-106
Q6CZK1658 Glycogen debranching enzy yes no 0.705 0.838 0.409 1e-105
C6DH78658 Glycogen debranching enzy yes no 0.703 0.835 0.403 1e-102
B2VJR7658 Glycogen debranching enzy yes no 0.689 0.819 0.415 1e-101
A4WFL4657 Glycogen debranching enzy yes no 0.763 0.908 0.389 1e-101
A1JSI8662 Glycogen debranching enzy yes no 0.685 0.809 0.4 1e-101
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function desciption
 Score = 1184 bits (3062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/770 (73%), Positives = 643/770 (83%), Gaps = 8/770 (1%)

Query: 14  LPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKH 73
           L + S+S+    F+  FS  L  +FS+ S    MGL+LS++ +         K  S++K 
Sbjct: 2   LTSPSSSSTYDPFSSNFSPSLTNAFSS-SFTIPMGLKLSRRVTRARIFSRKIKDRSTLKV 60

Query: 74  TTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAV 133
           T   A+     ERV+EEE+  ++ET L  K S G+  P+GVS+V+ GINFA+FSQ+AT+V
Sbjct: 61  TCRRAH-----ERVVEEEASTMTETKL-FKVSSGEVSPLGVSQVDKGINFALFSQNATSV 114

Query: 134 TLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWH 193
           TLCLSL +  K D  D GMIEL LDP VNKTGD WHIC+EDLP + VLYGYRVDGP +W 
Sbjct: 115 TLCLSLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQ 174

Query: 194 QGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEK 253
           QGHRFD SI+L+DPYAKLV+G   FGD+S K ++F GTY+FES PFDWGD+YK PNIPEK
Sbjct: 175 QGHRFDRSILLLDPYAKLVKGHSSFGDSSQKFAQFYGTYDFESSPFDWGDDYKFPNIPEK 234

Query: 254 DLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQ 313
           DLVIYEMNVRAFT DESSG+DP I GSYLG I+KIPHL +LGINAVELLPVFEFDE+E Q
Sbjct: 235 DLVIYEMNVRAFTADESSGMDPAIGGSYLGFIEKIPHLQDLGINAVELLPVFEFDELELQ 294

Query: 314 RRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVV 373
           RR NPRDHMVNTWGYST+NFF+PMSRYA+G G P+KAS EFKEMVKALH AGIEVILDVV
Sbjct: 295 RRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVILDVV 354

Query: 374 YNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLR 433
           YNHTNEADD  PYTTSFRGIDNKVYYM+D   QLLN++GCGNTLNCNHPVVMELILDSLR
Sbjct: 355 YNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELILDSLR 414

Query: 434 HWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYL 493
           HWV EYHVDGFRFDLASVLCR TDGSPL+APPLIRAIAKD++LSRCKIIAEPWDC GLYL
Sbjct: 415 HWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYL 474

Query: 494 VGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFI 553
           VGKFPNWDRWAEWNG YRDD+R+FIKGD GMKG  ATR+SGSSDLY+VN+RKPYH +NF+
Sbjct: 475 VGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFV 534

Query: 554 IAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNF 613
           IAHDGFTL DLVSYN+KHNEANGEGGNDGCNDN SWNCGFEGET DA IK+LR+RQMKNF
Sbjct: 535 IAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNF 594

Query: 614 HLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIK 673
           HLALM+SQGTPMMLMGDEYGHTRYGNNNSYGHDT++NNFQW +L+ KK +H+RFFSEVIK
Sbjct: 595 HLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFSEVIK 654

Query: 674 FRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDN-NGADIYLAFNAHDFFVKV 732
           FR S  V   E+FL   ++TWHEDNWDN +SKFLAFTLHD   G DIY+AFNAHD+FVK 
Sbjct: 655 FRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHDGIGGRDIYVAFNAHDYFVKA 714

Query: 733 SLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 782
            +P PPP +QWFRV DTNLESPDD V EG AG   TYN++P+SSILL++K
Sbjct: 715 LIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVAPFSSILLQSK 764
Involved in starch catabolism. ISA3 removes different branches than ISA1-ISA2, namely short chains that prevent amylopectin crystallization. May be the debranching enzyme required to assist beta-amylases for starch degradation in leaves at night.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 6EC: 8
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A8GKU9|GLGX_SERP5 Glycogen debranching enzyme OS=Serratia proteamaculans (strain 568) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q6CZK1|GLGX_ERWCT Glycogen debranching enzyme OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|C6DH78|GLGX_PECCP Glycogen debranching enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B2VJR7|GLGX_ERWT9 Glycogen debranching enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A4WFL4|GLGX_ENT38 Glycogen debranching enzyme OS=Enterobacter sp. (strain 638) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A1JSI8|GLGX_YERE8 Glycogen debranching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query782
302142002775 unnamed protein product [Vitis vinifera] 0.987 0.996 0.780 0.0
359492463784 PREDICTED: isoamylase 3, chloroplastic-l 0.983 0.980 0.779 0.0
255545834783 isoamylase, putative [Ricinus communis] 0.988 0.987 0.754 0.0
356518455772 PREDICTED: isoamylase 3, chloroplastic-l 0.971 0.984 0.769 0.0
356508064783 PREDICTED: isoamylase 3, chloroplastic-l 0.989 0.988 0.758 0.0
139867062783 isoamylase-type starch-debranching enzym 0.988 0.987 0.754 0.0
224063283819 predicted protein [Populus trichocarpa] 0.984 0.940 0.733 0.0
73698629736 isoamylase isoform 3 [Pisum sativum] 0.933 0.991 0.777 0.0
22328517764 isoamylase 3 [Arabidopsis thaliana] gi|2 0.974 0.997 0.731 0.0
27728149766 isoamylase isoform 3 [Solanum tuberosum] 0.938 0.958 0.741 0.0
>gi|302142002|emb|CBI19205.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/776 (78%), Positives = 666/776 (85%), Gaps = 4/776 (0%)

Query: 9   MIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTS 68
           MIH PL   SN+ K  LF+   +     S    S    MGL LSKK S  N  R  +KT 
Sbjct: 1   MIH-PLVGESNA-KFPLFSALSNRDSGASSFGTSRIIGMGLLLSKKVSGSNMKRTVSKTW 58

Query: 69  SSVKHTTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQ 128
             ++  T +AY +  Q+RVLEEE+P+++ET+  LK   GQAFP+GVSEVENGINFAIFSQ
Sbjct: 59  DCLRPRTTNAYGRHAQDRVLEEEAPQIAETSPSLKVLPGQAFPLGVSEVENGINFAIFSQ 118

Query: 129 HATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDG 188
           HATA+ LCL LP+R K D  D  M+EL LD  VN+TGDIWHIC+EDLPRS VLYGY +DG
Sbjct: 119 HATAIVLCLFLPQRGKKDRMDDLMVELTLDADVNRTGDIWHICVEDLPRSNVLYGYCIDG 178

Query: 189 PRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLP 248
           PRDWHQGHRFD+S VLIDPYAKLVEGRR FGDAS K SKFLGTY+F+SLPFDWGDNYK+P
Sbjct: 179 PRDWHQGHRFDNSTVLIDPYAKLVEGRRFFGDASNKWSKFLGTYDFDSLPFDWGDNYKVP 238

Query: 249 NIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFD 308
           +IPEKDLVIYEMNVRAFT D+SSGLDP +RGSYLG+I+KIPHLL+LGINAVELLPVFEFD
Sbjct: 239 SIPEKDLVIYEMNVRAFTADKSSGLDPNVRGSYLGVIEKIPHLLDLGINAVELLPVFEFD 298

Query: 309 EMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEV 368
           E EFQRR NPRDHM+NTWGYSTINFF+PMSRYA+ GGGP+KAS EFKEMVKALHGAGIEV
Sbjct: 299 EFEFQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGPIKASREFKEMVKALHGAGIEV 358

Query: 369 ILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVD--GTGQLLNYAGCGNTLNCNHPVVME 426
           ILDVVYNHTNEADD NPYTTSFRGIDNKVYYMVD    GQLLN++GCGNTLNCNHP+VME
Sbjct: 359 ILDVVYNHTNEADDENPYTTSFRGIDNKVYYMVDLNNEGQLLNFSGCGNTLNCNHPMVME 418

Query: 427 LILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPW 486
           LILDSLRHWV+EYHVDGFRFDLASVLCRGTDGSPLNAPP+IR IAKD ILSRCKIIAEPW
Sbjct: 419 LILDSLRHWVIEYHVDGFRFDLASVLCRGTDGSPLNAPPIIREIAKDDILSRCKIIAEPW 478

Query: 487 DCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKP 546
           DC GLYLVG+FPNWDRWAEWNGKYRDDLR+FIKGDPG KG  ATR++GSSDLY+VNKRKP
Sbjct: 479 DCGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGTKGNFATRVAGSSDLYKVNKRKP 538

Query: 547 YHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALR 606
           YHS+NF+IAHDGFTLYDLVSYN KHN ANGEGG DG NDNFSWNCGFEGET DA IKALR
Sbjct: 539 YHSVNFVIAHDGFTLYDLVSYNSKHNNANGEGGKDGTNDNFSWNCGFEGETADAKIKALR 598

Query: 607 SRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYR 666
           SRQMKNFHLALM SQGTPMMLMGDEYGHTRYGNNNSYGHDTAIN+F WGQL+++K   +R
Sbjct: 599 SRQMKNFHLALMCSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINHFLWGQLDSRKRDRFR 658

Query: 667 FFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAH 726
           FF EVIKFR+   VFGRE+FL   DVTWHEDNWDNY+SKFLAFTLH NNG DIYLAFN H
Sbjct: 659 FFKEVIKFRRMHHVFGRENFLEKKDVTWHEDNWDNYESKFLAFTLHANNGGDIYLAFNTH 718

Query: 727 DFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 782
           DFFVKV++P PP  R+WFRVVDTNLESP D V EG  G GS YN++PYSSILLEAK
Sbjct: 719 DFFVKVAIPSPPANRRWFRVVDTNLESPKDFVSEGVPGIGSAYNVAPYSSILLEAK 774

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359492463|ref|XP_002284042.2| PREDICTED: isoamylase 3, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255545834|ref|XP_002513977.1| isoamylase, putative [Ricinus communis] gi|223547063|gb|EEF48560.1| isoamylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356518455|ref|XP_003527894.1| PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356508064|ref|XP_003522781.1| PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|139867062|dbj|BAF52943.1| isoamylase-type starch-debranching enzyme 3 [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|224063283|ref|XP_002301076.1| predicted protein [Populus trichocarpa] gi|222842802|gb|EEE80349.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|73698629|gb|AAZ81837.1| isoamylase isoform 3 [Pisum sativum] Back     alignment and taxonomy information
>gi|22328517|ref|NP_192641.2| isoamylase 3 [Arabidopsis thaliana] gi|251764781|sp|Q9M0S5.2|ISOA3_ARATH RecName: Full=Isoamylase 3, chloroplastic; Short=AtISA3; Flags: Precursor gi|20259518|gb|AAM13879.1| putative isoamylase [Arabidopsis thaliana] gi|22136708|gb|AAM91673.1| putative isoamylase [Arabidopsis thaliana] gi|110742373|dbj|BAE99109.1| isoamylase-like protein [Arabidopsis thaliana] gi|332657313|gb|AEE82713.1| isoamylase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|27728149|gb|AAN15319.1| isoamylase isoform 3 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query782
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.974 0.997 0.710 2.6e-308
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.452 0.452 0.454 4.4e-154
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.702 0.732 0.400 1.3e-100
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.702 0.732 0.400 1.3e-100
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.662 0.788 0.389 3e-85
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.668 0.797 0.348 3.2e-77
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.668 0.797 0.348 3.2e-77
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.538 0.477 0.355 4.4e-61
TIGR_CMR|BA_2728852 BA_2728 "pullulanase, putative 0.419 0.384 0.282 2.2e-32
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.415 0.455 0.292 7.9e-31
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2958 (1046.3 bits), Expect = 2.6e-308, P = 2.6e-308
 Identities = 547/770 (71%), Positives = 628/770 (81%)

Query:    14 LPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKH 73
             L + S+S+    F+  FS  L  +FS++     MGL+LS++ +         K  S++K 
Sbjct:     2 LTSPSSSSTYDPFSSNFSPSLTNAFSSSFTI-PMGLKLSRRVTRARIFSRKIKDRSTLKV 60

Query:    74 TTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAV 133
             T   A+     ERV+EEE+  ++ET L  K S G+  P+GVS+V+ GINFA+FSQ+AT+V
Sbjct:    61 TCRRAH-----ERVVEEEASTMTETKL-FKVSSGEVSPLGVSQVDKGINFALFSQNATSV 114

Query:   134 TLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWH 193
             TLCLSL +  K D  D GMIEL LDP VNKTGD WHIC+EDLP + VLYGYRVDGP +W 
Sbjct:   115 TLCLSLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQ 174

Query:   194 QGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEK 253
             QGHRFD SI+L+DPYAKLV+G   FGD+S K ++F GTY+FES PFDWGD+YK PNIPEK
Sbjct:   175 QGHRFDRSILLLDPYAKLVKGHSSFGDSSQKFAQFYGTYDFESSPFDWGDDYKFPNIPEK 234

Query:   254 DLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQ 313
             DLVIYEMNVRAFT DESSG+DP I GSYLG I+KIPHL +LGINAVELLPVFEFDE+E Q
Sbjct:   235 DLVIYEMNVRAFTADESSGMDPAIGGSYLGFIEKIPHLQDLGINAVELLPVFEFDELELQ 294

Query:   314 RRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVV 373
             RR NPRDHMVNTWGYST+NFF+PMSRYA+G G P+KAS EFKEMVKALH AGIEVILDVV
Sbjct:   295 RRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVILDVV 354

Query:   374 YNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLR 433
             YNHTNEADD  PYTTSFRGIDNKVYYM+D   QLLN++GCGNTLNCNHPVVMELILDSLR
Sbjct:   355 YNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELILDSLR 414

Query:   434 HWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYL 493
             HWV EYHVDGFRFDLASVLCR TDGSPL+APPLIRAIAKD++LSRCKIIAEPWDC GLYL
Sbjct:   415 HWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYL 474

Query:   494 VGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFI 553
             VGKFPNWDRWAEWNG YRDD+R+FIKGD GMKG  ATR+SGSSDLY+VN+RKPYH +NF+
Sbjct:   475 VGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFV 534

Query:   554 IAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNF 613
             IAHDGFTL DLVSYN+KH                SWNCGFEGET DA IK+LR+RQMKNF
Sbjct:   535 IAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNF 594

Query:   614 HLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIK 673
             HLALM+SQGTPMMLMGDEYGHTRYGNNNSYGHDT++NNFQW +L+ KK +H+RFFSEVIK
Sbjct:   595 HLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFSEVIK 654

Query:   674 FRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDN-NGADIYLAFNAHDFFVKV 732
             FR S  V   E+FL   ++TWHEDNWDN +SKFLAFTLHD   G DIY+AFNAHD+FVK 
Sbjct:   655 FRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHDGIGGRDIYVAFNAHDYFVKA 714

Query:   733 SLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 782
              +P PPP +QWFRV DTNLESPDD V EG AG   TYN++P+SSILL++K
Sbjct:   715 LIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVAPFSSILLQSK 764
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009569 "chloroplast starch grain" evidence=IDA
GO:0005983 "starch catabolic process" evidence=IMP
GO:0019156 "isoamylase activity" evidence=IDA
GO:0000272 "polysaccharide catabolic process" evidence=RCA
GO:0005982 "starch metabolic process" evidence=RCA
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2728 BA_2728 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M0S5ISOA3_ARATH3, ., 2, ., 1, ., 6, 80.73110.97440.9973yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.680.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_II000936
hypothetical protein (819 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)
• •• •• 0.624
estExt_Genewise1_v1.C_LG_IV2986
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)
• •• •• 0.613
estExt_Genewise1_v1.C_LG_IV0101
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (950 aa)
• •• •• 0.548
gw1.X.878.1
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (953 aa)
• •• •• 0.537
gw1.VII.2145.1
disproportionating enzyme (EC-2.4.1.25) (523 aa)
•  •  • 0.502
fgenesh4_pm.C_LG_XIV000240
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)
• •   • 0.416
gw1.V.1420.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)
• •   • 0.403

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query782
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 0.0
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 0.0
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 0.0
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-167
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 1e-142
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 8e-96
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 2e-73
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 8e-64
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 3e-38
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 2e-37
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 3e-36
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 3e-35
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 6e-34
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 1e-28
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 1e-27
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 9e-27
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 6e-26
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 7e-24
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 1e-17
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 8e-17
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 2e-16
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 7e-16
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 1e-15
cd11234101 cd11234, E_set_GDE_N, N-terminal Early set domain 2e-15
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 5e-15
smart00642166 smart00642, Aamy, Alpha-amylase domain 8e-14
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 3e-13
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 5e-13
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 2e-11
TIGR01515618 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha 4e-11
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 7e-11
cd11334447 cd11334, AmyAc_TreS, Alpha amylase catalytic domai 9e-11
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 1e-10
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 2e-10
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 6e-10
PLN02960897 PLN02960, PLN02960, alpha-amylase 6e-10
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 7e-10
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 1e-09
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 3e-09
PRK10785598 PRK10785, PRK10785, maltodextrin glucosidase; Prov 3e-09
cd11332481 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti 3e-08
PRK14706639 PRK14706, PRK14706, glycogen branching enzyme; Pro 6e-08
cd11330472 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d 2e-07
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 2e-07
cd11354357 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt 3e-07
cd11328470 cd11328, AmyAc_maltase, Alpha amylase catalytic do 1e-06
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 2e-06
cd11333428 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca 3e-06
cd0268882 cd02688, E_set, Early set domain associated with t 7e-06
cd11324536 cd11324, AmyAc_Amylosucrase, Alpha amylase catalyt 9e-06
cd11331450 cd11331, AmyAc_OligoGlu_like, Alpha amylase cataly 1e-05
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 1e-05
PRK147051224 PRK14705, PRK14705, glycogen branching enzyme; Pro 2e-05
cd11359456 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic dom 4e-05
cd11340407 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal 7e-05
cd11335538 cd11335, AmyAc_MTase_N, Alpha amylase catalytic do 9e-05
cd11352443 cd11352, AmyAc_5, Alpha amylase catalytic domain f 1e-04
cd11348429 cd11348, AmyAc_2, Alpha amylase catalytic domain f 2e-04
PLN00196428 PLN00196, PLN00196, alpha-amylase; Provisional 8e-04
PRK09441479 PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev 0.001
cd11314302 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase 0.002
cd11319375 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d 0.003
PRK10933551 PRK10933, PRK10933, trehalose-6-phosphate hydrolas 0.003
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 0.004
cd11317329 cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalyt 0.004
cd11329477 cd11329, AmyAc_maltase-like, Alpha amylase catalyt 0.004
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information 
 Score =  730 bits (1886), Expect = 0.0
 Identities = 253/443 (57%), Positives = 299/443 (67%), Gaps = 15/443 (3%)

Query: 239 FDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQ--KIPHLLELGI 296
           FDW      P IP +D VIYEM+VR FT      +  E+RG+Y GL +  KIP+L ELG+
Sbjct: 1   FDWEG-DARPRIPWEDTVIYEMHVRGFTKLHP-DVPEELRGTYAGLAEPAKIPYLKELGV 58

Query: 297 NAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKE 356
            AVELLPV  FD+ E    R     + N WGY+T+NFF+P  RYA+    P     EFK 
Sbjct: 59  TAVELLPVHAFDDEEHLVER----GLTNYWGYNTLNFFAPDPRYASDDA-PGGPVDEFKA 113

Query: 357 MVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQ-LLNYAGCGN 415
           MVKALH AGIEVILDVVYNHT E  +  P T SFRG+DN  YY +D  G   LNY GCGN
Sbjct: 114 MVKALHKAGIEVILDVVYNHTAEGGELGP-TLSFRGLDNASYYRLDPDGPYYLNYTGCGN 172

Query: 416 TLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAI 475
           TLN NHPVV+ LILDSLR+WV E HVDGFRFDLASVL R  DG P   PPL+ AIA+D +
Sbjct: 173 TLNTNHPVVLRLILDSLRYWVTEMHVDGFRFDLASVLGRDPDGFPDPNPPLLEAIAQDPV 232

Query: 476 LSRCKIIAEPWDCRGL-YLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISG 534
           LS  K+IAEPWD  G  Y VG FP    WAEWN +YRDD+R+F +GD G+ G  ATR++G
Sbjct: 233 LSGVKLIAEPWDIGGGGYQVGNFPPG--WAEWNDRYRDDVRRFWRGDGGLVGDFATRLAG 290

Query: 535 SSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFE 594
           SSDL+  + R P  S+NFI AHDGFTL DLVSYN KHNEANGE   DG NDN SWNCG E
Sbjct: 291 SSDLFGHDGRSPSASVNFITAHDGFTLADLVSYNEKHNEANGENNRDGHNDNLSWNCGVE 350

Query: 595 GETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQW 654
           G TDD  I ALR RQM+N    L++SQGTPM+L GDE+G T+ GNNN+Y  D  I+   W
Sbjct: 351 GPTDDPEILALRRRQMRNLLATLLLSQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWLDW 410

Query: 655 GQLETKKNSHYRFFSEVIKFRQS 677
             LE   +  +RF   +I  R++
Sbjct: 411 DLLE-ADSDLFRFVRRLIALRKA 432

Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 433
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199893 cd11234, E_set_GDE_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|236759 PRK10785, PRK10785, maltodextrin glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins Back     alignment and domain information
>gnl|CDD|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins Back     alignment and domain information
>gnl|CDD|199878 cd02688, E_set, Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus Back     alignment and domain information
>gnl|CDD|200463 cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase Back     alignment and domain information
>gnl|CDD|200470 cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200494 cd11359, AmyAc_SLC3A1, Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins Back     alignment and domain information
>gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200474 cd11335, AmyAc_MTase_N, Alpha amylase catalytic domain found in maltosyltransferase Back     alignment and domain information
>gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|165762 PLN00196, PLN00196, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200456 cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200468 cd11329, AmyAc_maltase-like, Alpha amylase catalytic domain family found in maltase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 782
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
PLN02960897 alpha-amylase 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN02361401 alpha-amylase 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
PLN02784894 alpha-amylase 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 100.0
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.95
smart00642166 Aamy Alpha-amylase domain. 99.89
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.85
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.84
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.75
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.72
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.65
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.59
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.54
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.47
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.38
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.28
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.24
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 99.0
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.83
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.83
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.62
PRK05402726 glycogen branching enzyme; Provisional 98.57
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.55
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.52
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 98.36
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.23
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.22
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 97.98
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.83
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 97.61
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 97.59
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 97.52
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.48
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 97.29
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 97.11
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 96.91
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 96.89
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 96.8
cd06600317 GH31_MGAM-like This family includes the following 96.76
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 96.76
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 96.67
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 96.66
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 96.51
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 96.47
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 96.45
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 96.26
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 96.23
PRK14508497 4-alpha-glucanotransferase; Provisional 96.17
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.17
PLN02635538 disproportionating enzyme 96.12
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 96.05
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 95.57
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 95.51
smart0063281 Aamy_C Aamy_C domain. 95.46
PRK10658665 putative alpha-glucosidase; Provisional 95.2
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 94.86
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 94.79
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 94.74
PRK10426635 alpha-glucosidase; Provisional 94.71
PLN02950 909 4-alpha-glucanotransferase 94.36
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 94.18
TIGR00217513 malQ 4-alpha-glucanotransferase. This enzyme is kn 93.75
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 93.16
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 92.97
cd06595292 GH31_xylosidase_XylS-like This family represents a 92.88
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 92.31
PF02446496 Glyco_hydro_77: 4-alpha-glucanotransferase; InterP 92.12
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 91.87
PF05913357 DUF871: Bacterial protein of unknown function (DUF 91.74
PLN03244872 alpha-amylase; Provisional 90.88
PF14488166 DUF4434: Domain of unknown function (DUF4434) 90.76
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 89.83
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 89.56
COG1640520 MalQ 4-alpha-glucanotransferase [Carbohydrate tran 89.39
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 89.33
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 89.13
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 88.71
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 88.66
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 87.98
COG3589360 Uncharacterized conserved protein [Function unknow 87.82
KOG1065805 consensus Maltase glucoamylase and related hydrola 87.68
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 87.51
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 87.46
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 87.21
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 87.14
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 87.13
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 86.44
PF00728351 Glyco_hydro_20: Glycosyl hydrolase family 20, cata 86.01
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 85.67
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 85.5
PRK12568730 glycogen branching enzyme; Provisional 84.16
cd06570311 GH20_chitobiase-like_1 A functionally uncharacteri 82.29
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=1.3e-111  Score=986.90  Aligned_cols=644  Identities=46%  Similarity=0.797  Sum_probs=533.6

Q ss_pred             CCCCCCCccEEeCCcEEEEEEcCCCCeEEEEEEeCCCccccCCCCCceeeeCCCCCCCCCCEEEEEEeCCCCCCceEEEE
Q 003977          106 QGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYR  185 (782)
Q Consensus       106 ~~~~~~lGa~~~~~g~~F~vwaP~a~~v~L~l~~~~~~~~~~~~~~~~~~~l~~~~~~~G~vW~~~v~~~~~~g~~Y~y~  185 (782)
                      +|.+.||||++.++||+|+||||+|++|+|++|...      ...+..+++|..   ++|+||+++|+++ .+|++|+|+
T Consensus         1 ~g~~~~LGa~~~~~g~~F~vwap~A~~V~L~l~~~~------~~~~~~~~~m~~---~~~gvW~~~v~~~-~~g~~Y~yr   70 (688)
T TIGR02100         1 PGMPFPLGATWDGQGVNFALFSANAEKVELCLFDAQ------GEKEEARLPLPE---RTDDIWHGYLPGA-QPGQLYGYR   70 (688)
T ss_pred             CCCCcCCCeEEeCCcEEEEEECCCCCEEEEEEEcCC------CCceeeEEeccc---CCCCEEEEEECCC-CCCCEEEEE
Confidence            478899999999999999999999999999999642      122344678853   4566999999985 489999999


Q ss_pred             EecCCCCCCCccccCceeeeCccccccccccccCccc-----------------cccccccccccCCCCCCCCCCCCCCC
Q 003977          186 VDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDAS-----------------AKLSKFLGTYEFESLPFDWGDNYKLP  248 (782)
Q Consensus       186 i~~~~~~~~~~~~~~~~~~~DPyA~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~w~~~~~~p  248 (782)
                      |+++..+..|.+|++..+++||||+++.+...++...                 ........++..+ .+|+|+++..+|
T Consensus        71 v~g~~~~~~g~~f~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d-~~~~w~~~~~~p  149 (688)
T TIGR02100        71 VHGPYDPENGHRFNPNKLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVD-PDFDWGGDEQRP  149 (688)
T ss_pred             EeeeeCCCCCcccCcCceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeC-CCCCCCCcccCC
Confidence            9987666678899998999999999998664321100                 0000001111222 358998764556


Q ss_pred             CCCCCCeEEEEEecccccCCCCCCCCCCCCCCHHHHHhh--chHHHHcCCcEEEECCccccchhhhhhcCCCCCCCCCcC
Q 003977          249 NIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTW  326 (782)
Q Consensus       249 ~~~~~~~vIYei~v~~Ft~~~~~g~~~~~~G~~~gl~~~--LdyLk~LGvt~I~L~Pi~e~~~~~~~~~~~~~~~~~~~w  326 (782)
                      ..+|+++|||||||++|+..+ ++++...+|||+||+++  |||||+||||+||||||+++.+......    ....++|
T Consensus       150 ~~~~~d~iIYE~hvr~Ft~~~-~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~----~~~~~yw  224 (688)
T TIGR02100       150 RTPWEDTIIYEAHVKGFTQLH-PDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLLE----KGLRNYW  224 (688)
T ss_pred             CCCccccEEEEEEhHHhcCCC-CCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCccccccc----cCCCCcc
Confidence            678999999999999999763 44556678999999996  9999999999999999999843221110    1124679


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEeeecccccCCCCCCCccccccCCCCCcceeeCCC--
Q 003977          327 GYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGT--  404 (782)
Q Consensus       327 GY~~~dy~a~d~~yGt~~~~p~~~~~elk~LV~~~H~~Gi~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~yy~~d~~--  404 (782)
                      ||+|.|||+|+++||+.+     +++|||+||++||++||+||||||||||+..+...+.. .+++.++..||+.++.  
T Consensus       225 GYd~~~y~a~d~~y~~~g-----~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~-~~~~~d~~~yy~~~~~~~  298 (688)
T TIGR02100       225 GYNTLGFFAPEPRYLASG-----QVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTL-SFRGIDNASYYRLQPDDK  298 (688)
T ss_pred             CcCcccccccChhhcCCC-----CHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcc-cccCCCCCcceEecCCCC
Confidence            999999999999998741     36999999999999999999999999999754444432 5777788888887654  


Q ss_pred             CCccCcCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEccccccccCCCCCCCCChHHHHHHHhccccCCceEEec
Q 003977          405 GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAE  484 (782)
Q Consensus       405 g~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~g~~~~~~~~l~~i~~~~~~~~~~ligE  484 (782)
                      +.+.++++|+++||+++|+||++|+++++||+++|||||||||+|..|.++.++.. ...+++++|..++++|+++||||
T Consensus       299 ~~~~~~~g~gn~ln~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~~~-~~~~~~~~i~~d~~~~~~~ligE  377 (688)
T TIGR02100       299 RYYINDTGTGNTLNLSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYGFD-MLSGFFTAIRQDPVLAQVKLIAE  377 (688)
T ss_pred             ceecCCCCccccccCCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCCCc-ccHHHHHHHHhCcccCCeEEEEe
Confidence            77889999999999999999999999999999999999999999999987644322 24678999998888999999999


Q ss_pred             ccCCC-CccccCCCCCcccchhhchhHHHHHHHHHhCCCCchhhHHHHhhcCccccccCCCCCcceEEEeeccCCCCchh
Q 003977          485 PWDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYD  563 (782)
Q Consensus       485 ~w~~~-~~~~~g~~~~~~~~~~~n~~f~~~i~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~p~~~vnfi~~HD~~tl~d  563 (782)
                      +|+.+ +.++.+.|+.  .|++||+.||+.|++|++|+.+....|+.++.++.++|....+.|.++||||+|||++||+|
T Consensus       378 ~W~~~~~~~~~~~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~iNyv~~HD~~tl~D  455 (688)
T TIGR02100       378 PWDIGPGGYQVGNFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPWASINFVTAHDGFTLRD  455 (688)
T ss_pred             eecCCCCcccccCCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcCEEEEEEeCCCCchHHH
Confidence            99987 5677777763  57999999999999999999999999999999999888766678899999999999999999


Q ss_pred             hhhhccccccccCCCCCCCCCCCCCcCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeeeEeccccccCccCCCCCCC
Q 003977          564 LVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSY  643 (782)
Q Consensus       564 ~~~~~~~~~~~~g~~~~~g~~~n~sw~~g~~g~~~~~~~~~~~~~~~r~a~~~ll~~pGiP~iy~GdE~g~~~~g~~n~y  643 (782)
                      +++++.|||++||+.++||.++|+|||||+||++.++.+...|.+++|++++++||+|||||||||||+|+++.|++|+|
T Consensus       456 ~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~~GdE~g~t~~G~~n~y  535 (688)
T TIGR02100       456 LVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLLAGDEFGRTQQGNNNAY  535 (688)
T ss_pred             HHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceeeecHhhccCCCCCCCCc
Confidence            99999999999999999999999999999999999988888899999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCccccccchHHHHHHHHHHHHhcCCCCCCCCcccc-------Ccceeec--------cccCCCCCcEEE
Q 003977          644 GHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNI-------NDVTWHE--------DNWDNYDSKFLA  708 (782)
Q Consensus       644 ~~~~~~~~~~W~~~~~~~~~l~~~~~~Li~lRk~~paL~~g~~~~~-------~~~~~~~--------~~~~~~~~~vla  708 (782)
                      |+++.+++|+|+..+. ..++++|+|+||+|||+||+|+.+++...       .+++|..        ++|.....++|+
T Consensus       536 ~~~~~~~~~dW~~~~~-~~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~~~~~~~w~~~~~~~l~  614 (688)
T TIGR02100       536 CQDNEIGWVDWSLDEG-DDELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGEPMTEEDWENPETRLLC  614 (688)
T ss_pred             cCCCcccccCcccccc-cHHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCCcCChhhcCCCCCCEEE
Confidence            9999999999997554 45899999999999999999999987643       4688953        457555579999


Q ss_pred             EEEEcCC-------CCeEEEEEeCCCCcEEEEcCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCceEEEcCcEEEEEEe
Q 003977          709 FTLHDNN-------GADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEA  781 (782)
Q Consensus       709 f~R~~~~-------~~~~lVv~N~~~~~~~~~Lp~~~~~~~w~~l~~t~~~~~~~~~~~~~~~~~~~i~l~p~s~~vl~~  781 (782)
                      |.+....       .+.++|++|++.+++++.||...  ..|.+++||+......+.    ...+..+.|+|+|++||.+
T Consensus       615 ~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~--~~w~~~~dt~~~~~~~~~----~~~~~~~~v~~~s~~vl~~  688 (688)
T TIGR02100       615 MVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGG--GRWELVLDTADEEAPGIH----LDAGQEAELPARSVLLLRR  688 (688)
T ss_pred             EEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCC--CcEEEEecCCCCCCcccc----ccCCCEEEEcCCEEEEEeC
Confidence            9997532       14799999999999999999742  689999999754433221    1235679999999999974

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PLN02950 4-alpha-glucanotransferase Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>TIGR00217 malQ 4-alpha-glucanotransferase Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>COG3589 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query782
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 1e-121
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 4e-90
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 3e-74
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 6e-41
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 9e-33
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 3e-30
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 4e-30
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 5e-30
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 2e-26
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 8e-19
2fhb_A1083 Crystal Structure Analysis Of Klebsiella Pneumoniae 8e-15
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-14
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-14
2fh6_A920 Crystal Structure Analysis Of Klebsiella Pneumoniae 1e-14
2fgz_A926 Crystal Structure Analysis Of Apo Pullulanase From 1e-14
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 1e-14
2fh8_A922 Crystal Structure Analysis Of Klebsiella Pneumoniae 1e-14
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 3e-14
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 6e-14
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 6e-14
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 2e-13
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 4e-13
3k1d_A722 Crystal Structure Of Glycogen Branching Enzyme Syno 6e-09
1lwh_A441 Crystal Structure Of T. Maritima 4-Alpha-Glucanotra 7e-09
1wza_A488 Crystal Structure Of Alpha-Amylase From H.Orenii Le 1e-08
1ea9_C583 Cyclomaltodextrinase Length = 583 5e-08
2z1k_A475 Crystal Structure Of Ttha1563 From Thermus Thermoph 2e-07
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-07
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-07
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 3e-07
1gvi_A588 Thermus Maltogenic Amylase In Complex With Beta-Cd 3e-07
1j0j_A588 Crystal Structure Of Neopullulanase E357q Complex W 2e-06
1j0h_A588 Crystal Structure Of Bacillus Stearothermophilus Ne 2e-06
1uok_A558 Crystal Structure Of B. Cereus Oligo-1,6-Glucosidas 3e-06
1jf5_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 6e-06
2ze0_A555 Alpha-glucosidase Gsj Length = 555 8e-06
1wzm_A585 Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (t 1e-05
1g1y_A585 Crystal Structure Of Alpha-Amylase Ii (Tvaii) From 1e-05
1wzl_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 1e-05
1bvz_A585 Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vul 1e-05
1m53_A570 Crystal Structure Of Isomaltulose Synthase (Pali) F 1e-05
1wzk_A585 Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T 1e-05
1jf6_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 1e-05
2wc7_A488 Crystal Structure Of Nostoc Punctiforme Debranching 1e-05
4aef_A645 The Crystal Structure Of Thermostable Amylase From 3e-05
1vfm_A585 Crystal Structure Of Thermoactinomyces Vulgaris R-4 4e-05
1jl8_A585 Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoact 4e-05
4gi6_A557 Crystal Structure Of The Mutb F164l Mutant In Compl 2e-04
1m7x_A617 The X-Ray Crystallographic Structure Of Branching E 2e-04
2pwe_A556 Crystal Structure Of The Mutb E254q Mutant In Compl 2e-04
2pwg_A556 Crystal Structure Of The Trehalulose Synthase Mutb 2e-04
1zja_A557 Crystal Structure Of The Trehalulose Synthase Mutb 2e-04
4h2c_A557 Trehalulose Synthase Mutb R284c Mutant Length = 557 2e-04
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 2e-04
4gkl_A422 Crystal Structure Of A Noncanonic Maltogenic Alpha- 2e-04
4gin_A584 Crystal Structure Of The Mutb R284c Mutant From Cry 3e-04
1g5a_A628 Amylosucrase From Neisseria Polysaccharea Length = 3e-04
4fls_A628 Crystal Structure Of Amylosucrase Inactive Double M 4e-04
4flo_A628 Crystal Structure Of Amylosucrase Double Mutant A28 4e-04
4flq_A628 Crystal Structure Of Amylosucrase Double Mutant A28 4e-04
4flr_A628 Crystal Structure Of Amylosucrase Double Mutant A28 4e-04
3ueq_A632 Crystal Structure Of Amylosucrase From Neisseria Po 4e-04
1jgi_A628 Crystal Structure Of The Active Site Mutant Glu328g 6e-04
1jda_A429 Maltotetraose-Forming Exo-Amylase Length = 429 6e-04
1mvy_A628 Amylosucrase Mutant E328q Co-Crystallized With Malt 6e-04
3gbd_A558 Crystal Structure Of The Isomaltulose Synthase Smua 7e-04
2amg_A418 Structure Of Hydrolase (Glycosidase) Length = 418 7e-04
1qi5_A429 Mutant (D294n) Maltotetraose-Forming Exo-Amylase In 8e-04
1gcy_A527 High Resolution Crystal Structure Of Maltotetraose- 8e-04
1qi4_A429 Mutant (e219g) Maltotetraose-forming Exo-amylase In 8e-04
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 283/708 (39%), Positives = 395/708 (55%), Gaps = 76/708 (10%)
Query: 107 GQAFPIGVSEVEN--GINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKT 164
           G  +P+G + +E+  G+NF++FS++A  V L L     +K   +   +IE+      NKT
Sbjct: 15  GDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKE---IIEVK-----NKT 66
Query: 165 GDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGR--------- 215
           GDIWH+ +  L R   LY YRV GP     G RF+ + VLIDPYAK + G          
Sbjct: 67  GDIWHVFVPGL-RPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFG 125
Query: 216 RHFGDASAKLS---KFLGTYEFESLP----FDWGDN--YKLPNIPEKDLVIYEMNVRAFT 266
              GD +  L+   +  G Y  +S+     F+W D    K   +P KD VIYE++V+ FT
Sbjct: 126 YKIGDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGKKVPLKDTVIYEVHVKGFT 185
Query: 267 GDESSGLDPEIRGSYLGLI--QKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVN 324
                 L   IRG+Y GL   Q I +L +LGI  VEL+PVF F +  F   +     + N
Sbjct: 186 KLRLD-LPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKG----LTN 240
Query: 325 TWGYSTINFFSPMSRYAAGG--GGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADD 382
            WGY  INFFSP  RY++ G  GG + +   FK+MV  LH AGIEVI+DVVYNHT E + 
Sbjct: 241 YWGYDPINFFSPECRYSSTGCLGGQVLS---FKKMVNELHNAGIEVIIDVVYNHTAEGNH 297
Query: 383 ANPYTTSFRGIDNKVYYMV--DGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYH 440
             P T SFRGIDN  YYM+  D     L++ G GNTLN +HP V++++LDSLR+WV E H
Sbjct: 298 LGP-TLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMH 356
Query: 441 VDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC-RGLYLVGKFPN 499
           VDGFRFDLA+ L R      +     I A+ +D ILS+ K+IAEPWD  +G Y VG FP 
Sbjct: 357 VDGFRFDLAAALARELYSVNMLNTFFI-ALQQDPILSQVKLIAEPWDVGQGGYQVGNFPY 415
Query: 500 WDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGF 559
             +WAEWNGKYRD +R+F +G+      +A R+ GS D+Y  N + P+ SIN++ +HDGF
Sbjct: 416 --QWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGF 473
Query: 560 TLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMV 619
           TL DLVSYN KH               +SWNCG EG T+D ++   R +Q +NF + L+V
Sbjct: 474 TLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLV 533
Query: 620 SQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRR 679
           SQGTPM+L GDE   T+ GNNN++  D  I  F W  L+ +K+    F  ++I+F ++  
Sbjct: 534 SQGTPMILGGDELSRTQRGNNNAFCQDNEITWFDW-NLDERKSKFLEFVKKMIQFYRAHP 592
Query: 680 VFGREDFLN--------INDVTWH--------EDNWDNYDSKFLAFTLHDN--NGADIYL 721
            F RE +          + DVT++        E  W +  ++ + F L  +  +  ++Y 
Sbjct: 593 AFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSS-PTQLVIFVLEGSVMDEINMYG 651
Query: 722 AFNAHDFFVKVSLPPPP------PKRQWFRVVDTNLES--PDDIVPEG 761
              A D F+ +    P       PK +W  V+ + L    P++ + EG
Sbjct: 652 ERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKPEERIIEG 699
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae Pullulanase Complexed With Maltose Length = 1083 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|3K1D|A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H37rv Length = 722 Back     alignment and structure
>pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 Back     alignment and structure
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|2Z1K|A Chain A, Crystal Structure Of Ttha1563 From Thermus Thermophilus Hb8 Length = 475 Back     alignment and structure
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 Back     alignment and structure
>pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With Maltotetraose Length = 588 Back     alignment and structure
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 Back     alignment and structure
>pdb|1UOK|A Chain A, Crystal Structure Of B. Cereus Oligo-1,6-Glucosidase Length = 558 Back     alignment and structure
>pdb|1JF5|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2 Mutant F286a Length = 585 Back     alignment and structure
>pdb|2ZE0|A Chain A, Alpha-glucosidase Gsj Length = 555 Back     alignment and structure
>pdb|1WZM|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (tva Ii) Mutatnt R469k Length = 585 Back     alignment and structure
>pdb|1G1Y|A Chain A, Crystal Structure Of Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R-47 And Beta-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|1WZL|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt R469l Length = 585 Back     alignment and structure
>pdb|1BVZ|A Chain A, Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R- 47 Length = 585 Back     alignment and structure
>pdb|1M53|A Chain A, Crystal Structure Of Isomaltulose Synthase (Pali) From Klebsiella Sp. Lx3 Length = 570 Back     alignment and structure
>pdb|1WZK|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt D465n Length = 585 Back     alignment and structure
>pdb|1JF6|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase Mutant F286y Length = 585 Back     alignment and structure
>pdb|2WC7|A Chain A, Crystal Structure Of Nostoc Punctiforme Debranching Enzyme( Npde)(Acarbose Soaked) Length = 488 Back     alignment and structure
>pdb|4AEF|A Chain A, The Crystal Structure Of Thermostable Amylase From The Pyrococcus Length = 645 Back     alignment and structure
>pdb|1VFM|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2ALPHA-Cyclodextrin Complex Length = 585 Back     alignment and structure
>pdb|1JL8|A Chain A, Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoactinomyces Vulgaris R-47 With Beta-Cyclodextrin Based On A Co- Crystallization With Methyl Beta-Cyclodextrin Length = 585 Back     alignment and structure
>pdb|4GI6|A Chain A, Crystal Structure Of The Mutb F164l Mutant In Complex With Glucose Length = 557 Back     alignment and structure
>pdb|1M7X|A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme Length = 617 Back     alignment and structure
>pdb|2PWE|A Chain A, Crystal Structure Of The Mutb E254q Mutant In Complex With The Substrate Sucrose Length = 556 Back     alignment and structure
>pdb|2PWG|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 Complexed To The Inhibitor Castanospermine Length = 556 Back     alignment and structure
>pdb|1ZJA|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45 (Triclinic Form) Length = 557 Back     alignment and structure
>pdb|4H2C|A Chain A, Trehalulose Synthase Mutb R284c Mutant Length = 557 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 Back     alignment and structure
>pdb|4GIN|A Chain A, Crystal Structure Of The Mutb R284c Mutant From Crystals Soaked With The Inhibitor Deoxynojirimycin Length = 584 Back     alignment and structure
>pdb|1G5A|A Chain A, Amylosucrase From Neisseria Polysaccharea Length = 628 Back     alignment and structure
>pdb|4FLS|A Chain A, Crystal Structure Of Amylosucrase Inactive Double Mutant F290k-E328q From Neisseria Polysaccharea In Complex With Sucrose Length = 628 Back     alignment and structure
>pdb|4FLO|A Chain A, Crystal Structure Of Amylosucrase Double Mutant A289p-F290c From Neisseria Polysaccharea Length = 628 Back     alignment and structure
>pdb|4FLQ|A Chain A, Crystal Structure Of Amylosucrase Double Mutant A289p-F290i From Neisseria Polysaccharea Length = 628 Back     alignment and structure
>pdb|4FLR|A Chain A, Crystal Structure Of Amylosucrase Double Mutant A289p-F290l From Neisseria Polysaccharea Length = 628 Back     alignment and structure
>pdb|3UEQ|A Chain A, Crystal Structure Of Amylosucrase From Neisseria Polysaccharea In Complex With Turanose Length = 632 Back     alignment and structure
>pdb|1JGI|A Chain A, Crystal Structure Of The Active Site Mutant Glu328gln Of Amylosucrase From Neisseria Polysaccharea In Complex With The Natural Substrate Sucrose Length = 628 Back     alignment and structure
>pdb|1JDA|A Chain A, Maltotetraose-Forming Exo-Amylase Length = 429 Back     alignment and structure
>pdb|1MVY|A Chain A, Amylosucrase Mutant E328q Co-Crystallized With Maltoheptaose. Length = 628 Back     alignment and structure
>pdb|3GBD|A Chain A, Crystal Structure Of The Isomaltulose Synthase Smua From Protaminobacter Rubrum Length = 558 Back     alignment and structure
>pdb|2AMG|A Chain A, Structure Of Hydrolase (Glycosidase) Length = 418 Back     alignment and structure
>pdb|1QI5|A Chain A, Mutant (D294n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 Back     alignment and structure
>pdb|1GCY|A Chain A, High Resolution Crystal Structure Of Maltotetraose-Forming Exo-Amylase Length = 527 Back     alignment and structure
>pdb|1QI4|A Chain A, Mutant (e219g) Maltotetraose-forming Exo-amylase In Complex With Maltotetraose Length = 429 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query782
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 0.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 0.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 0.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 0.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 0.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 0.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 0.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 0.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 0.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-169
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 3e-36
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 5e-33
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 3e-31
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 2e-22
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 4e-22
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 5e-22
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-21
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 3e-21
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 4e-21
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 7e-21
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 3e-20
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 4e-20
3aml_A755 OS06G0726400 protein; starch-branching, transferas 9e-20
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 2e-18
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 4e-17
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 8e-17
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 3e-16
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 3e-16
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 4e-16
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 5e-16
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 1e-15
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 1e-15
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 7e-15
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 4e-14
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 6e-14
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 6e-14
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 9e-14
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 3e-13
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 4e-13
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 6e-13
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 8e-13
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 2e-12
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 2e-12
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 3e-12
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 5e-12
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 7e-04
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 2e-11
3k8k_A 669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 7e-11
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 7e-11
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 2e-10
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 2e-10
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 8e-10
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 6e-09
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 4e-07
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 8e-07
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 2e-06
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 2e-05
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 2e-05
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 4e-05
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 5e-05
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 5e-05
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 9e-05
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
 Score =  885 bits (2288), Expect = 0.0
 Identities = 237/702 (33%), Positives = 331/702 (47%), Gaps = 72/702 (10%)

Query: 103 KTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVN 162
           + + G+  P+G      G+NF +FS HA  V LC+           +G      L     
Sbjct: 3   QLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDA--------NGQEHRYDLP---G 51

Query: 163 KTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDAS 222
            +GDIWH  + D     + YGYRV GP    +GHRF+ + +LIDP A+ ++G        
Sbjct: 52  HSGDIWHGYLPDAR-PGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLL 110

Query: 223 AKLSKFLGTYEFESLP-----------FDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESS 271
              +        ++             +DW D+   P  P    +IYE +V+  T     
Sbjct: 111 H--AGHNEPDYRDNAAIAPKCVVVVDHYDWEDD-APPRTPWGSTIIYEAHVKGLT-YLHP 166

Query: 272 GLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYS 329
            +  EIRG+Y  L     I +L +LGI A+ELLPV +F      +R      + N WGY+
Sbjct: 167 EIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRM----GLSNYWGYN 222

Query: 330 TINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTS 389
            +  F+    YA      L    EF++ +KALH AGIEVILD+V NH+ E D   P   S
Sbjct: 223 PVAMFALHPAYACSPETALD---EFRDAIKALHKAGIEVILDIVLNHSAELDLDGP-LFS 278

Query: 390 FRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLA 449
            RGIDN+ YY +   G   N+ GCGNTLN +HP V++     LR+WV   HVDGFRFDLA
Sbjct: 279 LRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLA 338

Query: 450 SVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC-RGLYLVGKFPNWDRWAEWNG 508
           +V+ R  +       PL  AI    +LS+ K+IAEPWD   G Y VG FP    +AEWN 
Sbjct: 339 AVMGRTPEFRQD--APLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFP--PLFAEWND 394

Query: 509 KYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYN 568
            +RD  R+F        G  A R + SSD+++ N R P  +IN + AHDGFTL D V +N
Sbjct: 395 HFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFN 454

Query: 569 YKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLM 628
           +KHNEANGE   DG N+N+S N G EG      +   R   +      L++SQGTPM+L 
Sbjct: 455 HKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLA 514

Query: 629 GDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFL- 687
           GDE+GH+++GNNN+Y  D  +    W Q  +       F + +I  R+         +  
Sbjct: 515 GDEHGHSQHGNNNAYCQDNQLTWLDWSQASS---GLTAFTAALIHLRKRIPALVENRWWE 571

Query: 688 -NINDVTW--------HEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPP 738
               +V W          D W N   K L   L D       +A NA     ++ LP   
Sbjct: 572 EGDGNVRWLNRYAQPLSTDEWQN-GPKQLQILLSD----RFLIAINATLEVTEIVLPAGE 626

Query: 739 PKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLE 780
               W  +             E      + +    +   + +
Sbjct: 627 ----WHAIPPFA--------GEDNPVITAVWQGPAHGLCVFQ 656
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Length = 720 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Length = 543 Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Length = 558 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Length = 589 Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Length = 557 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Length = 555 Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Length = 570 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query782
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 100.0
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.97
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.88
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.84
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.82
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.82
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.75
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.28
1z0n_A96 5'-AMP-activated protein kinase, beta-1 subunit; b 98.27
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 98.14
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 98.02
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.76
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 97.4
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 97.32
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 96.58
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 96.55
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 96.45
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 96.3
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 96.12
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 95.96
1x1n_A524 4-alpha-glucanotransferase; disproportionating enz 95.85
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 95.37
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 95.04
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 95.01
1esw_A500 Amylomaltase; (beta,alpha)8-barrel, glucanotransfe 94.89
1tz7_A505 4-alpha-glucanotransferase; (beta, alpha)8- barrel 94.69
2qlv_B252 Protein SIP2, protein SPM2; heterotrimer, ATP-bind 94.27
1x7f_A385 Outer surface protein; structural genomics, unknow 93.29
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 92.9
2p0o_A372 Hypothetical protein DUF871; structural genomics, 92.78
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 92.7
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 92.54
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 92.06
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 91.58
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 91.52
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 90.53
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 89.77
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 89.64
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 88.83
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 88.76
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 88.57
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 87.79
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 87.44
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 87.09
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 86.95
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 86.72
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 86.25
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 86.06
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 85.37
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 85.2
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 85.11
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 84.72
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 84.69
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 84.66
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 83.96
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 83.9
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 83.81
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 83.53
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 83.47
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 83.28
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 82.75
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 82.46
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 82.1
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 81.28
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 80.93
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 80.88
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 80.62
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 80.57
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 80.54
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 80.09
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 80.03
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
Probab=100.00  E-value=6.6e-101  Score=914.11  Aligned_cols=652  Identities=41%  Similarity=0.704  Sum_probs=525.7

Q ss_pred             cccCCCCCCCCccEE--eCCcEEEEEEcCCCCeEEEEEEeCCCccccCCCCCceeeeCCCCCCCCCCEEEEEEeCCCCCC
Q 003977          102 LKTSQGQAFPIGVSE--VENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSE  179 (782)
Q Consensus       102 ~~~~~~~~~~lGa~~--~~~g~~F~vwaP~a~~v~L~l~~~~~~~~~~~~~~~~~~~l~~~~~~~G~vW~~~v~~~~~~g  179 (782)
                      ..+.+|.+.||||++  .++||+|+||||+|++|+|++|... +   + .....+++|.+   .++++|+++||++. .|
T Consensus        10 ~~~~~g~~~~lGa~~~~~~~g~~F~vwap~A~~V~l~lf~~~-~---~-~~~~~~~~m~~---~~~gvw~~~v~~~~-~g   80 (718)
T 2vr5_A           10 RPLRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLT-N---Q-KYPKEIIEVKN---KTGDIWHVFVPGLR-PG   80 (718)
T ss_dssp             SCCBCCCSCSSEEEEEGGGTEEEEEEECSSCSEEEEEECCSS-C---C-SSCSEEEEECE---ESSSEEEEEEETCC-TT
T ss_pred             ccccCCCCCCCcceEeeCCCeEEEEEECCCCCEEEEEEEcCC-C---C-CCcceEEeCcc---CCCCEEEEEeCCCC-CC
Confidence            456789999999999  7889999999999999999996431 0   0 12345788853   34459999999964 79


Q ss_pred             ceEEEEEecCCCCCCCccccCceeeeCccccccccccccCcc---------c--------cccccccccccCCCCCCCCC
Q 003977          180 VLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDA---------S--------AKLSKFLGTYEFESLPFDWG  242 (782)
Q Consensus       180 ~~Y~y~i~~~~~~~~~~~~~~~~~~~DPyA~~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~~w~  242 (782)
                      ++|+|+|+++..+..|++|++..+++||||+++.+...|...         .        ........+...+ ..|+|+
T Consensus        81 ~~Y~y~v~g~~~p~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d-~~~~W~  159 (718)
T 2vr5_A           81 QLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVIN-PYFEWD  159 (718)
T ss_dssp             CEEEEEEECCEETTTTEECCTTSCBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCC-CCCCCT
T ss_pred             CEEEEEEeeecCcccCcccCCCceEcCcCccccccCccccccccccccCCcccccccccccccccccceEEec-CCcCCC
Confidence            999999998655667889988889999999999865433210         0        0000000111222 259998


Q ss_pred             CCC--CCCCCCCCCeEEEEEecccccCCCCCCCCCCCCCCHHHHHhh--chHHHHcCCcEEEECCccccchhhhhhcCCC
Q 003977          243 DNY--KLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEFDEMEFQRRRNP  318 (782)
Q Consensus       243 ~~~--~~p~~~~~~~vIYei~v~~Ft~~~~~g~~~~~~G~~~gl~~~--LdyLk~LGvt~I~L~Pi~e~~~~~~~~~~~~  318 (782)
                      ++.  .+|..+|+++|||||||++|+.++.+ .+...+|||+||+++  |||||+||||+||||||+++.........+ 
T Consensus       160 ~~~~~~~~~~~~~~~vIYeihv~~f~~~~~~-~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g-  237 (718)
T 2vr5_A          160 DEDFIKGKKVPLKDTVIYEVHVKGFTKLRLD-LPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKG-  237 (718)
T ss_dssp             TGGGGSSSCCCTTSCCEEEECTTTTTTTCTT-SCTTSTTSHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTT-
T ss_pred             ccccccCCCCChhHCEEEEEEcchhhcCCCC-CCcccCcCHHHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccC-
Confidence            751  34567899999999999999985432 234567999999999  999999999999999999985433221111 


Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEeeecccccCCCCCCCccccccCCCCCcc
Q 003977          319 RDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVY  398 (782)
Q Consensus       319 ~~~~~~~wGY~~~dy~a~d~~yGt~~~~p~~~~~elk~LV~~~H~~Gi~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~y  398 (782)
                         ..++|||++.|||+|+++|||.+ .+..+++|||+||++||++||+||||+|+||++.++...+.. .+++.+++.|
T Consensus       238 ---~~~~wGY~~~~y~~~~~~yGt~~-~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~-~~~~~~~~~y  312 (718)
T 2vr5_A          238 ---LTNYWGYDPINFFSPECRYSSTG-CLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTL-SFRGIDNTAY  312 (718)
T ss_dssp             ---CCCSSCCCBSCSSSBCGGGCSSC-TTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCS-SHHHHHSTTT
T ss_pred             ---CcCccCcCcccCcccChhhcCCC-CCCchHHHHHHHHHHHHHCCCEEEEEeccCcccCccccCccc-cccCCCCCcc
Confidence               14689999999999999999975 345678999999999999999999999999999743322222 4556667888


Q ss_pred             eeeCCCC--CccCcCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEccccccccCCCCCCCCChHHHHHHHhcccc
Q 003977          399 YMVDGTG--QLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAIL  476 (782)
Q Consensus       399 y~~d~~g--~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~g~~~~~~~~l~~i~~~~~~  476 (782)
                      |++++.+  .+.++++|+++||++||+|+++|+++++||++||||||||||+++++.++++ .+....++++++..++..
T Consensus       313 y~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~~~-~~~~~~~~~~~i~~~~~~  391 (718)
T 2vr5_A          313 YMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELY-SVNMLNTFFIALQQDPIL  391 (718)
T ss_dssp             BCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBSSS-SBCTTCHHHHHHHHCTTG
T ss_pred             eEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchhhhhhccC-CccchHHHHHHHHhCccc
Confidence            8886443  5788999999999999999999999999999999999999999999988753 233456789999887788


Q ss_pred             CCceEEecccCCC-CccccCCCCCcccchhhchhHHHHHHHHHhCCCCchhhHHHHhhcCccccccCCCCCcceEEEeec
Q 003977          477 SRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIA  555 (782)
Q Consensus       477 ~~~~ligE~w~~~-~~~~~g~~~~~~~~~~~n~~f~~~i~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~p~~~vnfi~~  555 (782)
                      |++++|||+|+.+ +.+..++|+  ..+++||+.|++.++.|++++.+....++..+.++...|....+.|..++||++|
T Consensus       392 ~~~~liaE~w~~~~~~~~~~~f~--~~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~~~~~~p~~~vnf~~~  469 (718)
T 2vr5_A          392 SQVKLIAEPWDVGQGGYQVGNFP--YQWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTS  469 (718)
T ss_dssp             GGSEEEECCBCSSTTCBCTTCSC--TTEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHGGGTCCGGGEEECSCC
T ss_pred             CCcEEEecccccCCCcccccCCc--hhHHHHhHHHHHHHHHHHcCCcchHHHHHHHHhcchhhhcccCCCcceeeeeeec
Confidence            9999999999876 446667776  2468999999999999999998888899999988877776555677889999999


Q ss_pred             cCCCCchhhhhhccccccccCCCCCCCCCCCCCcCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeeeEeccccccCc
Q 003977          556 HDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHT  635 (782)
Q Consensus       556 HD~~tl~d~~~~~~~~~~~~g~~~~~g~~~n~sw~~g~~g~~~~~~~~~~~~~~~r~a~~~ll~~pGiP~iy~GdE~g~~  635 (782)
                      ||++|+.+++++..+|++++|+.+++|...|.||||+++|+++++.+...+.+++|++++++|++||+||||||||+|++
T Consensus       470 HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~~G~P~iy~GdE~G~~  549 (718)
T 2vr5_A          470 HDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMILGGDELSRT  549 (718)
T ss_dssp             SSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTSSSEEEEETTTTTTCC
T ss_pred             CCCCCHHHHHHHhhhhhhhcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCcEEEechhhccc
Confidence            99999999999999999999999999999999999999999998888777788899999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCccccccchHHHHHHHHHHHHhcCCCCCCCCcccc--------Ccceeec--------ccc
Q 003977          636 RYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNI--------NDVTWHE--------DNW  699 (782)
Q Consensus       636 ~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~~~Li~lRk~~paL~~g~~~~~--------~~~~~~~--------~~~  699 (782)
                      +.|++|+||+++.+++|+|+..+. ..++++|||+||+|||+||+|+.+++...        .++.|+.        ..|
T Consensus       550 ~~G~~~~y~~~~~~~~~~W~~~~~-~~~l~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  628 (718)
T 2vr5_A          550 QRGNNNAFCQDNEITWFDWNLDER-KSKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTW  628 (718)
T ss_dssp             CTTCSCCTTCCSTTTSCCCCCCHH-HHHHHHHHHHHHHHHHHCGGGSCSSCCCSSBCTTCSSBSEEEECSSSCBCCTTTT
T ss_pred             CCCCCCcccCCccccccCcccccc-chHHHHHHHHHHHHHhhCcccccCcccccccccccCCCceEEECCCCCcCCcccc
Confidence            999999999999999999998553 45899999999999999999999887532        2567742        123


Q ss_pred             CCCCCcEEEEEEEcC-------C-----CCeEEEEEeCCCCcEEEEcCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCc
Q 003977          700 DNYDSKFLAFTLHDN-------N-----GADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGS  767 (782)
Q Consensus       700 ~~~~~~vlaf~R~~~-------~-----~~~~lVv~N~~~~~~~~~Lp~~~~~~~w~~l~~t~~~~~~~~~~~~~~~~~~  767 (782)
                      . ...++|+|.|...       .     ++.++|++|++.+++++.||..+.+..|.+++++.....      .....+.
T Consensus       629 ~-~~~~~la~~r~~~~~~~~~~~~~~~~~~~ilv~~N~~~~~~~~~lp~~~~g~~w~~l~~t~~~~~------~~~~~~~  701 (718)
T 2vr5_A          629 S-SPTQLVIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKPEE------RIIEGEK  701 (718)
T ss_dssp             T-SEESEEEEEEEGGGCCCBCTTSCBCCCCEEEEEEECCSSCEEEECCSSEEEEEEESCCSCCCTTS------SCCCTTC
T ss_pred             C-CCCCEEEEEEeCCccccccccccccCCCeEEEEECCCCCcEEEECCCCCCCCeEEEEecCCCCcc------ccccCCC
Confidence            1 2368999999852       1     358999999999999999997544557999998864321      1112346


Q ss_pred             eEEEcCcEEEEEEe
Q 003977          768 TYNLSPYSSILLEA  781 (782)
Q Consensus       768 ~i~l~p~s~~vl~~  781 (782)
                      .++|+|+|++||+.
T Consensus       702 ~~~l~~~s~~vl~~  715 (718)
T 2vr5_A          702 ELEIEGRTALVYRR  715 (718)
T ss_dssp             EEEECSSEEEEEEE
T ss_pred             eEEECCcEEEEEEe
Confidence            79999999999975
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* Back     alignment and structure
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 Back     alignment and structure
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1 Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 782
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 4e-94
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 7e-64
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 1e-53
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 5e-14
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 4e-49
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 2e-41
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 2e-36
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 4e-36
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 1e-35
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 3e-35
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 2e-33
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 2e-30
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 6e-29
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 2e-27
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 3e-27
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 9e-27
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-26
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 4e-25
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 4e-25
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 7e-25
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 3e-24
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 1e-22
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 2e-22
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 2e-22
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 3e-22
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 5e-22
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 5e-22
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 6e-21
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 3e-20
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 1e-19
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 2e-19
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 2e-19
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 3e-18
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 4e-18
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 4e-18
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 8e-17
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 8e-15
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 7e-05
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 5e-04
d2bhua197 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydro 5e-04
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  300 bits (767), Expect = 4e-94
 Identities = 166/477 (34%), Positives = 222/477 (46%), Gaps = 49/477 (10%)

Query: 248 PNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEF 307
           P   +KD VIYE++VR FT ++ + +  + RG+Y G   K  +L  LG+ AVE LPV E 
Sbjct: 10  PTRAQKDDVIYEVHVRGFT-EQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQET 68

Query: 308 DEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGG--GGPLKASWEFKEMVKALHGAG 365
                    N  D   N WGY T N+FSP  RYA     GGP     EF+ MV+A H AG
Sbjct: 69  QNDANDVVPN-SDANQNYWGYMTENYFSPDRRYAYNKAAGGPTA---EFQAMVQAFHNAG 124

Query: 366 IEVILDVVYNHT------NEADDANPYTTSFRGIDNKVYYM-VDGTGQLLNYAGCGNTLN 418
           I+V +DVVYNHT        +D       S+RG+DN  YY    G     +  G G   N
Sbjct: 125 IKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFN 184

Query: 419 CNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGS------------------- 459
             + V   LI+DSL +W     VDGFRFDLASVL                          
Sbjct: 185 TYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAA 244

Query: 460 ----PLNAPPLIRAIAKDAILSRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGKYRDDL 514
                +N       +   A  S   + AEPW      Y +G FP    W+EWNG +RD L
Sbjct: 245 DSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSL 302

Query: 515 RKFIKGDPGMK---GILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKH 571
           R+       M       A   SGSS+L++ + R P++SINFI  HDG TL D+ S N  +
Sbjct: 303 RQAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGAN 362

Query: 572 NEANGEGGN--DGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMG 629
           N      G    G + N+SW+ G    T  A     + R  +      M+S GTP+M  G
Sbjct: 363 NSQAWPYGPSDGGTSTNYSWDQGMSAGTGAA---VDQRRAARTGMAFEMLSAGTPLMQGG 419

Query: 630 DEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDF 686
           DEY  T   NNN+Y  D++ N   +    T +++ Y F   +I FR++        +
Sbjct: 420 DEYLRTLQCNNNAYNLDSSANWLTY-SWTTDQSNFYTFAQRLIAFRKAHPALRPSSW 475
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Length = 97 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query782
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.92
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.69
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.66
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.54
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.4
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.33
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.7
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 98.58
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 98.56
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 98.54
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.44
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 98.39
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.36
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.15
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 97.69
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 97.41
d1tz7a1485 Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] 97.24
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 97.11
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 96.77
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 96.71
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 96.7
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 96.36
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 95.71
d1x1na1523 Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax 95.68
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 95.28
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 95.08
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 94.95
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 94.81
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 94.77
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 94.26
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 94.22
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 94.22
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 94.05
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 93.75
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 93.52
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 93.47
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 92.52
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 92.15
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 92.12
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 92.01
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 91.74
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 90.96
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 90.91
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 90.61
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 90.21
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 89.99
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 89.41
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 87.85
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 87.78
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 87.55
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 87.54
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 87.54
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 86.9
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 86.19
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 86.12
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 85.07
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 84.67
d2d3na187 Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 84.64
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 84.63
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 84.1
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 84.1
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 84.0
d1ud2a190 Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [Ta 83.82
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 83.61
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 83.46
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 81.9
d1jaea193 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 80.63
d1yhta1344 Dispersin B, DspB {Actinobacillus actinomycetemcom 80.51
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=6.1e-64  Score=569.97  Aligned_cols=428  Identities=37%  Similarity=0.572  Sum_probs=324.6

Q ss_pred             CCCCCCCCeEEEEEecccccCCCCCCCCCCCCCCHHHHHhhchHHHHcCCcEEEECCccccchhhhhhcCCCCCCCCCcC
Q 003977          247 LPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTW  326 (782)
Q Consensus       247 ~p~~~~~~~vIYei~v~~Ft~~~~~g~~~~~~G~~~gl~~~LdyLk~LGvt~I~L~Pi~e~~~~~~~~~~~~~~~~~~~w  326 (782)
                      .|..+++|+|||||||++|++++++ ++...+|||+||++||||||+||||+||||||+++........++ ..+...+|
T Consensus         9 ~~~~~~~d~viYei~v~~f~~~~~~-~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~-~~~~~~y~   86 (475)
T d1bf2a3           9 KPTRAQKDDVIYEVHVRGFTEQDTS-IPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPN-SDANQNYW   86 (475)
T ss_dssp             CCCCCGGGCCEEEECHHHHHTTCTT-SCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTT-CCTTCCCS
T ss_pred             CCCCCCcceEEEEEEhhHhccCCCC-CCccccCCHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccc-cccCcCCC
Confidence            4666789999999999999987654 344567999999999999999999999999999985443322111 12235789


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEeeecccccCCCCCCCccccccCCCC---------Cc
Q 003977          327 GYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDN---------KV  397 (782)
Q Consensus       327 GY~~~dy~a~d~~yGt~~~~p~~~~~elk~LV~~~H~~Gi~VIlDvV~NH~~~~~~~~~~~~~~~~~~~---------~~  397 (782)
                      ||++.||++|||+|++.+ ......+|||+||++||++||+||||+|+||++.   .|+|+........         ..
T Consensus        87 GY~~~d~~~vdp~y~~~~-~~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~---~~~~~~~~~~~~~~~~~~~~~~~~  162 (475)
T d1bf2a3          87 GYMTENYFSPDRRYAYNK-AAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAE---GGTWTSSDPTTATIYSWRGLDNAT  162 (475)
T ss_dssp             CCCBSCSSCBCGGGCSCC-STTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTT---CSBSSSSCSSCBBCSSHHHHHHHH
T ss_pred             CCCcccCCCcCcccccCC-CCCCCHHHHHHHHHHHHhcCcEEEEEeccccccC---CCcccccCCCcCccccccCccccc
Confidence            999999999999995542 2233459999999999999999999999999996   7788754322211         11


Q ss_pred             ceeeC-CCCCccCcCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEccccccccCCCCC-----------------
Q 003977          398 YYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGS-----------------  459 (782)
Q Consensus       398 yy~~d-~~g~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gVDGFR~D~a~~l~~~~~g~-----------------  459 (782)
                      +|... .......+.+++++||+.||+|+++|++++++|++++||||||+|+++++..+....                 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
T d1bf2a3         163 YYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFD  242 (475)
T ss_dssp             HBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCCSSSSCCTTSTTCTTCSCCBC
T ss_pred             ccccCCCccccccCCCccCccchhhhHHHHHHHHHHHhhhhhcCCceEEEehHhhhchhhhccchhccCccCcccccchh
Confidence            12221 222334556678999999999999999999999999999999999999997654210                 


Q ss_pred             -CCCCh---HHHHHHHh--ccccCCceEEecccCCCC-ccccCCCCCcccchhhchhHHHHHHHHHhCCC---CchhhHH
Q 003977          460 -PLNAP---PLIRAIAK--DAILSRCKIIAEPWDCRG-LYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDP---GMKGILA  529 (782)
Q Consensus       460 -~~~~~---~~l~~i~~--~~~~~~~~ligE~w~~~~-~~~~g~~~~~~~~~~~n~~f~~~i~~~~~g~~---~~~~~~~  529 (782)
                       .....   +.++++..  ....+.+.+++|+|+.+. ....+.++.  .+..|+..+.+.++.+.....   ......+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (475)
T d1bf2a3         243 AADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLRQAQNELGSMTIYVTQDA  320 (475)
T ss_dssp             TTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT--TCEEECHHHHHHHHHHHHCBTTBCCCHHHHH
T ss_pred             hhhhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCCcc--chHHhcchhHHHHHHHhcccccchhhHhhhh
Confidence             00111   12222211  234567789999997763 233344442  457788889999988876543   3334556


Q ss_pred             HHhhcCccccccCCCCCcceEEEeeccCCCCchhhhhhccccccccCCCC--CCCCCCCCCcCCCCCCCCChHHHHHHHH
Q 003977          530 TRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGG--NDGCNDNFSWNCGFEGETDDASIKALRS  607 (782)
Q Consensus       530 ~~l~~~~~~~~~~~~~p~~~vnfi~~HD~~tl~d~~~~~~~~~~~~g~~~--~~g~~~n~sw~~g~~g~~~~~~~~~~~~  607 (782)
                      ..+.+..+.+....+.|...+||+.+||++++.|++.+...++.......  ..+...+++|+++..+.+....   .+.
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  397 (475)
T d1bf2a3         321 NDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTGAAV---DQR  397 (475)
T ss_dssp             HHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSCCHH---HHH
T ss_pred             hhcccchhhhhccCcCHHHHHhHHHhcchhhHHHHhhhhhhhhHhhccccccCCCcccccccccCccCCcchhH---HHH
Confidence            66777766776667788899999999999999999998888876655432  3455677889988887765533   345


Q ss_pred             HHHHHHHHHHHHcCCeeeEeccccccCccCCCCCCCCCCCCCCccCCCccccccchHHHHHHHHHHHHhcCCCCCCCCc
Q 003977          608 RQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDF  686 (782)
Q Consensus       608 ~~~r~a~~~ll~~pGiP~iy~GdE~g~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~~~Li~lRk~~paL~~g~~  686 (782)
                      +++|++++++||+|||||||||||+|+++.|++|+|++++++++++|+..+.. .++++|+|+||+|||+||+||+++|
T Consensus       398 ~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~~~~~~~-~~l~~~~~~Li~lR~~~paLr~~~~  475 (475)
T d1bf2a3         398 RAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQ-SNFYTFAQRLIAFRKAHPALRPSSW  475 (475)
T ss_dssp             HHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHHHCGGGSCSSC
T ss_pred             HHHHHHHHHHHHhccchheecCHhhCccCCCCcccccCCCccCccCCCccchh-HHHHHHHHHHHHHHhcChhhCCCCC
Confidence            77888999999999999999999999999999999999999999999886643 5899999999999999999999875
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} Back     information, alignment and structure