Citrus Sinensis ID: 003992

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-
MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW
cccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHcccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHccccHHccccccEEEEEEccccccccccccHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHccccEEEEcccccHHHHHHcccEEEccccccccHHHHHHHHHccccEEEEcccccccccccccEEEcccHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccc
cccccccccHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcHHHHHHHHHHcccccccHHHccccccccEEEEHHHHHHHHHcccccccccccccEEEHccccccccccHHHHccccccccHHHHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEccccccHccccEEEccccccccccccccEEEEEcccHccEccccccccccccEEEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcHEEEccHHHccccccEEEEEccccccHcccccccHcHcccccccccccHEHHHHHHHHccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHcccccEEccccccccHHHcccEEEEccccccHHHHHHHHHHHcccEEEEcccccHHHHHHcccccccccHHHHHHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccHHHHHHccccccccccccccc
mndetqatssskaFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLnsanrssapaEIDFVKKLQPKISEfrrvysapeiSKRVLEkwgprariRIDLSAIRNAIvsdvdvdaerdgggiiefdrgkrgrvgfrelwgerevgewepIRTLKMRLREFERKRELSVEEIfggfkssdFVEKVKSSWKAIckepeeskdvppldptELLAHLVRqsgpfldhlgvkrDLCDKIVESLCSKRKEQLLLRSIAggecsvlendnindELDLRIASVLQstghhyeggfwtdfgkddlsdkkrNVAIVTTaslpwmtgtavnpLFRAAYLAKTEQQNVTLLVPWlcksdqelvypnvtfcspeeqENYMRNWLEERVgfkadfkisfypgkfskerrsiipagdtsqfipskdadiaileepehlnwyhhgkrwtdkFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSaatqdlpksvicnvhgvnpkflQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHkndldgfkldvfgngedaYEVQSAAKRLDLNlnfqkgrdhaddslhgykvfinpsisdVLCTATAEALAMGKFvicadhpsneffrsfpncltyktSEDFVARVKEAlandpqpltpeqryNLSWEAATQRFIEYSELNRILnnnkddakssrndgkiirksfsvpnlsevvdgGLAFAHYCFTGNEFLRlctgaipgtrdydkqhcrdlhllppqvenpiygw
mndetqatssskafsfisrswreVRDSADADIQLMKNRANSFKNLATSFDRELENFLNsanrssapaeiDFVKklqpkisefrrvysapeiskrvlekwgprariridlsairnaivsdvdvdaerdgggiiefdrgkrgrvgfrelwgerevgewepirtlkmrlreferkrelsveeifggfkssdfvEKVKSSWKAIckepeeskdvpplDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVttaslpwmtgtaVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYpgkfskerrsiipagdtsqfipSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEAlandpqpltpeqryNLSWEAATQRFIEYSELNrilnnnkddakssrndgkiirksfsvpnlSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCrdlhllppqvenpiygw
MNDETQATssskafsfisrsWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW
********************************************************************IDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAIC***************ELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEAL***********RYNLSWEAATQRFIEYSELNRIL***************IIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLP**********
***************FISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEF************************IDLSAIRNAIV***************EFDRGKRGRVGFRELWGEREVGEWEPIRTL***********************SSDFVEKVKSS****************LDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSK*************************ELDLRIASVLQSTGHHYEGGF***********KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELN********************************VDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQV*NPIYGW
*************FSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW
******************RSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDV******GGIIE*****RGRVGFRELWG*REVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICK***ESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSI*GGECSVLE*DNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVAT***QGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRI****************IIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW
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MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPxxxxxxxxxxxxxxxxxxxxxIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query781 2.2.26 [Sep-21-2011]
Q6DW74786 Digalactosyldiacylglycero N/A no 0.989 0.983 0.788 0.0
Q6DW76783 Digalactosyldiacylglycero yes no 0.987 0.984 0.771 0.0
Q9S7D1808 Digalactosyldiacylglycero yes no 0.965 0.933 0.711 0.0
Q6DW73463 Digalactosyldiacylglycero N/A no 0.581 0.980 0.561 1e-159
Q6DW75463 Digalactosyldiacylglycero no no 0.582 0.982 0.562 1e-158
Q8W1S1473 Digalactosyldiacylglycero no no 0.581 0.959 0.544 1e-156
>sp|Q6DW74|DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1 Back     alignment and function desciption
 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/794 (78%), Positives = 696/794 (87%), Gaps = 21/794 (2%)

Query: 1   MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSA 60
           M  + Q  SSS AFSF+S+ WREVRDSADAD+QLMK+RANSFKNLATSFDRELENF NSA
Sbjct: 1   MASQRQPPSSSNAFSFLSKGWREVRDSADADLQLMKDRANSFKNLATSFDRELENFFNSA 60

Query: 61  ----------NRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLS 110
                     + S  PAEI+FVKKLQPK+SEFRR YS+P+ SK+VLEKW PRARIRIDLS
Sbjct: 61  APAFSVPAMRSASPPPAEIEFVKKLQPKLSEFRRAYSSPDFSKKVLEKWRPRARIRIDLS 120

Query: 111 AIRNAIVSDVDVDAERDGGGIIEFDRGKRGR-VGF-RELWGEREVGEWEPIRTLKMRLRE 168
           AI+NAIVS+ ++D      GI++F+RGKR R + F  EL GE E  +WEPIR LK RL+E
Sbjct: 121 AIKNAIVSE-EIDE-----GIVDFERGKRERRLSFWEELKGEGEAQDWEPIRALKTRLKE 174

Query: 169 FERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGP 228
           FE KR  SVE  F GFK+S+F+EKVKSS K++CKEP +SK+VPPLD  ELLA+ V+QSGP
Sbjct: 175 FE-KRSSSVE-FFDGFKNSEFLEKVKSSLKSMCKEPRDSKEVPPLDVAELLAYFVKQSGP 232

Query: 229 FLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQST 288
           FLD LGV+RD+CDKIVESL SKRK QLLL S++G E S+L N NINDELDLRIASVLQST
Sbjct: 233 FLDQLGVRRDVCDKIVESLYSKRKNQLLLPSLSGEESSLLGNGNINDELDLRIASVLQST 292

Query: 289 GHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLL 348
           GH  EGGFWTD  K DLSD +R+VAIVTTASLPWMTGTAVNPLFRAAYL+++E+Q VTLL
Sbjct: 293 GHRNEGGFWTDHAKHDLSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSEKQKVTLL 352

Query: 349 VPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSII 407
           VPWLCKSDQELVYP N+TF SPEEQE Y+RNWLEER+GFKADFKISFYPGKFS+ RRSII
Sbjct: 353 VPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSII 412

Query: 408 PAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGA 467
           PAGDT+QFIPSKDADIAILEEPEHLNWYHHG RWTDKFNHVVG+VHTNYLEYIKREKNGA
Sbjct: 413 PAGDTAQFIPSKDADIAILEEPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGA 472

Query: 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQG 527
           LQAF VKHINNWV RAYCDKVLRLSAATQDLPKSV+CNVHGVNPKFL+IGE +A +RE G
Sbjct: 473 LQAFLVKHINNWVARAYCDKVLRLSAATQDLPKSVVCNVHGVNPKFLKIGESIAAERELG 532

Query: 528 QQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL 587
           Q+ F+KGAYFLGKMVWAKGY+ELIDLLAKHK DLDG KLDVFGNGEDA EVQSAA+R DL
Sbjct: 533 QKGFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGVKLDVFGNGEDANEVQSAARRFDL 592

Query: 588 NLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPN 647
           NLNFQKGRDHADDSLH YKVFINPSISDVLCTATAEALAMGKFV+CADHPSNEFFRSFPN
Sbjct: 593 NLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPN 652

Query: 648 CLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAK 707
           CLTYKT EDF  +VKEALAN+P PLTPEQRY LSWEAATQRF+EYSEL+++LN  KD AK
Sbjct: 653 CLTYKTPEDFAVKVKEALANEPYPLTPEQRYQLSWEAATQRFMEYSELDKVLNKEKDGAK 712

Query: 708 SSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDL 767
            S+N+ KI+ KS S+PNL+E+VDGGLAFAHYC TGNEFLRLCTGA PGTRDYDKQHC+DL
Sbjct: 713 PSKNNRKIMAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDL 772

Query: 768 HLLPPQVENPIYGW 781
           +LLPPQVENPIYGW
Sbjct: 773 NLLPPQVENPIYGW 786
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages.
Lotus japonicus (taxid: 34305)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 1
>sp|Q6DW76|DGDG1_SOYBN Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S7D1|DGDG1_ARATH Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1 Back     alignment and function description
>sp|Q6DW73|DGDG2_LOTJA Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1 Back     alignment and function description
>sp|Q6DW75|DGDG2_SOYBN Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1 Back     alignment and function description
>sp|Q8W1S1|DGDG2_ARATH Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query781
255586525797 galactolipid galactosyltransferase, puta 0.994 0.974 0.792 0.0
225439442797 PREDICTED: digalactosyldiacylglycerol sy 0.980 0.961 0.789 0.0
75120872786 RecName: Full=Digalactosyldiacylglycerol 0.989 0.983 0.788 0.0
224140022793 predicted protein [Populus trichocarpa] 0.983 0.968 0.791 0.0
76800640780 digalactosyldiacylglycerol synthase 1 [V 0.983 0.984 0.776 0.0
356505431783 PREDICTED: digalactosyldiacylglycerol sy 0.987 0.984 0.773 0.0
351727022783 digalactosyldiacylglycerol synthase 1, c 0.987 0.984 0.771 0.0
449451183790 PREDICTED: digalactosyldiacylglycerol sy 0.976 0.965 0.771 0.0
312282649806 unnamed protein product [Thellungiella h 0.966 0.936 0.718 0.0
297833950808 hypothetical protein ARALYDRAFT_897369 [ 0.965 0.933 0.711 0.0
>gi|255586525|ref|XP_002533901.1| galactolipid galactosyltransferase, putative [Ricinus communis] gi|223526143|gb|EEF28483.1| galactolipid galactosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1296 bits (3353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/801 (79%), Positives = 707/801 (88%), Gaps = 24/801 (2%)

Query: 1   MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSA 60
           MN E+   S+S AFSFIS+ WREVRDSADAD+QLM+ RANSFKNLA SFDRELENF NS+
Sbjct: 1   MNGESSQPSTS-AFSFISKGWREVRDSADADLQLMRARANSFKNLANSFDRELENFFNSS 59

Query: 61  ------NRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRN 114
                 N +  P EIDFVKKLQPKISEFRR YSAPEISKRVL+K GPRA++ IDLSAIRN
Sbjct: 60  FPVGSFNSARTPTEIDFVKKLQPKISEFRRTYSAPEISKRVLQKLGPRAKLGIDLSAIRN 119

Query: 115 AIVSDVDVDAERDGG--GIIEFDRGKRGRVG---FRELWGER--------EVGEWEPIRT 161
           AIV+DV+V+ +   G  GI+EFDR +R R     F E WGE         + GEWEPIR 
Sbjct: 120 AIVADVEVEDDDGEGKIGIVEFDRVRRRRRRSVRFSEFWGESSKVEGGQGQFGEWEPIRA 179

Query: 162 LKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAH 221
           LK RLRE E+K E SVE IFG FK+++FVEK+KSS KAI +EP+ESK+VPPLD  ELLA+
Sbjct: 180 LKKRLRELEKKSE-SVE-IFGSFKNNEFVEKLKSSLKAI-REPQESKEVPPLDVPELLAY 236

Query: 222 LVRQSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRI 281
            VRQS PFLD LGV++D+CDKIVESLCSKRK QLLLR+++ GE S+ +++N+NDELD+RI
Sbjct: 237 FVRQSEPFLDQLGVRKDICDKIVESLCSKRKNQLLLRTLSTGESSLFDSENVNDELDVRI 296

Query: 282 ASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTE 341
           ASVLQSTGH YEGGFWTD  K  LSD KR+VAIVTTASLPWMTGTAVNPLFRAAYLAK+E
Sbjct: 297 ASVLQSTGHCYEGGFWTDVSKHSLSDGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSE 356

Query: 342 QQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFS 400
           +Q VTLLVPWLCKSDQELVYP N+TF SP+EQE+Y+RNWLE+R+GFKADFKISFYPGKFS
Sbjct: 357 KQKVTLLVPWLCKSDQELVYPSNLTFSSPQEQESYIRNWLEDRIGFKADFKISFYPGKFS 416

Query: 401 KERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYI 460
           KERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYI
Sbjct: 417 KERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYI 476

Query: 461 KREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKV 520
           KREKNGALQ+F VKHINNWVTRAYC KVLRLS ATQDLPKSVICNVHGVNPKFL+IGEKV
Sbjct: 477 KREKNGALQSFLVKHINNWVTRAYCHKVLRLSGATQDLPKSVICNVHGVNPKFLKIGEKV 536

Query: 521 ATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQS 580
             DRE GQQAFSKGAYFLGKMVWAKGY+ELIDLLAKHKN+LDGFKLDVFGNGEDA+EVQ 
Sbjct: 537 TADRELGQQAFSKGAYFLGKMVWAKGYKELIDLLAKHKNELDGFKLDVFGNGEDAHEVQI 596

Query: 581 AAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNE 640
           AAKRLDLN+NF KGRDHADDSLHGYKVFINPS+SDVLCTATAEALAMGKFV+CADHPSNE
Sbjct: 597 AAKRLDLNVNFLKGRDHADDSLHGYKVFINPSVSDVLCTATAEALAMGKFVVCADHPSNE 656

Query: 641 FFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILN 700
           FFRSFPNC TY+TSEDFVA+V+EAL N+PQPLTPEQRYNLSWEAATQRF++YS+L+++LN
Sbjct: 657 FFRSFPNCSTYRTSEDFVAKVREALENEPQPLTPEQRYNLSWEAATQRFMQYSDLDKVLN 716

Query: 701 NNKDDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYD 760
           +++ DAK SR  GK I KS S+PN+S +VDGGLAFAHYC TGNEFLRLCTGAIPGTRDYD
Sbjct: 717 DDQGDAKLSRASGKSIVKSVSLPNMSGMVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYD 776

Query: 761 KQHCRDLHLLPPQVENPIYGW 781
           KQHC+DLHLLPP VENPIYGW
Sbjct: 777 KQHCKDLHLLPPHVENPIYGW 797

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225439442|ref|XP_002264659.1| PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|75120872|sp|Q6DW74.1|DGDG1_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor gi|49617333|gb|AAT67422.1| digalactosyldiacylglycerol synthase 1 [Lotus japonicus] Back     alignment and taxonomy information
>gi|224140022|ref|XP_002323386.1| predicted protein [Populus trichocarpa] gi|222868016|gb|EEF05147.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|76800640|gb|ABA55727.1| digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] Back     alignment and taxonomy information
>gi|356505431|ref|XP_003521494.1| PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|351727022|ref|NP_001238170.1| digalactosyldiacylglycerol synthase 1, chloroplastic [Glycine max] gi|75120874|sp|Q6DW76.1|DGDG1_SOYBN RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor gi|49617329|gb|AAT67420.1| digalactosyldiacylglycerol synthase 1 [Glycine max] Back     alignment and taxonomy information
>gi|449451183|ref|XP_004143341.1| PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Cucumis sativus] gi|449523513|ref|XP_004168768.1| PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|312282649|dbj|BAJ34190.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|297833950|ref|XP_002884857.1| hypothetical protein ARALYDRAFT_897369 [Arabidopsis lyrata subsp. lyrata] gi|297330697|gb|EFH61116.1| hypothetical protein ARALYDRAFT_897369 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query781
TAIR|locus:2098333808 DGD1 "DIGALACTOSYL DIACYLGLYCE 0.955 0.923 0.717 8.2e-305
TAIR|locus:2126998473 DGD2 "digalactosyl diacylglyce 0.583 0.964 0.553 3.6e-144
TAIR|locus:2098333 DGD1 "DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2925 (1034.7 bits), Expect = 8.2e-305, P = 8.2e-305
 Identities = 562/783 (71%), Positives = 658/783 (84%)

Query:    21 WREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPA----------EID 70
             WREV DSADAD+QLM++RANS KNLA++FDRE+ENFLN++ RS+ P           EI 
Sbjct:    41 WREVWDSADADLQLMRDRANSVKNLASTFDREIENFLNNSARSAFPVGSPSASSFSNEIG 100

Query:    71 FVKKLQPKISEFRRVYSAPEISKRVLEKWGP-RARIRIDLSAIRNAIVSDVDVDAERDGG 129
              +KKLQPKISEFRRVYSAPEIS++V+E+WGP RA++ +DLSAI+ AIVS++++D ER G 
Sbjct:   101 IMKKLQPKISEFRRVYSAPEISRKVMERWGPARAKLGMDLSAIKKAIVSEMELD-ERQG- 158

Query:   130 GIIEFDRGKR----GRVGFRELWGERE------VGEWEPIRTLKMRLREFERKRELSVEE 179
              ++E  R +R     RV F E + E E       G+WEPIR+LK R +EFE++  L   E
Sbjct:   159 -VLEMSRLRRRRNSDRVRFTEFFAEAERDGEAYFGDWEPIRSLKSRFKEFEKRSSL---E 214

Query:   180 IFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLDHLGVKRDL 239
             I  GFK+S+FVEK+K+S+K+I KE +E+KDVPPLD  ELLA LVRQS PFLD +GV++D 
Sbjct:   215 ILSGFKNSEFVEKLKTSFKSIYKETDEAKDVPPLDVPELLACLVRQSEPFLDQIGVRKDT 274

Query:   240 CDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTD 299
             CD+IVESLC K K Q L R  +     ++ENDN   +LD+RIASVLQSTGHHY+GGFWTD
Sbjct:   275 CDRIVESLC-KCKSQQLWRLPSAQASDLIENDNHGVDLDMRIASVLQSTGHHYDGGFWTD 333

Query:   300 FGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359
             F K +  + KR+VAIVTTASLPWMTGTAVNPLFRAAYLAK  +Q+VTL+VPWLC+SDQEL
Sbjct:   334 FVKPETPENKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKAAKQSVTLVVPWLCESDQEL 393

Query:   360 VYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPS 418
             VYPN +TF SPEEQE+Y+R WLEER+GFKADFKISFYPGKFSKERRSI PAGDTSQFI S
Sbjct:   394 VYPNNLTFSSPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAGDTSQFISS 453

Query:   419 KDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINN 478
             KDADIAILEEPEHLNWY+HGKRWTDKFNHVVG+VHTNYLEYIKREKNGALQAFFV H+NN
Sbjct:   454 KDADIAILEEPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVNHVNN 513

Query:   479 WVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFL 538
             WVTRAYCDKVLRLSAATQDLPKSV+CNVHGVNPKFL IGEK+A +R +G+QAFSKGAYFL
Sbjct:   514 WVTRAYCDKVLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSRGEQAFSKGAYFL 573

Query:   539 GKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHA 598
             GKMVWAKGYRELIDL+AKHK++L  F LDV+GNGEDA EVQ AAK+ DLNLNF KGRDHA
Sbjct:   574 GKMVWAKGYRELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHA 633

Query:   599 DDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFV 658
             DD+LH YKVFINPSISDVLCTATAEALAMGKFV+CADHPSNEFFRSFPNCLTYKTSEDFV
Sbjct:   634 DDALHKYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFV 693

Query:   659 ARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKDDAKSSRNDGKIIRK 718
             ++V+EA+  +P PLTPEQ YNLSWEAATQRF+EYS+L++ILNN +         G+ +RK
Sbjct:   694 SKVQEAMTKEPLPLTPEQMYNLSWEAATQRFMEYSDLDKILNNGEG--------GRKMRK 745

Query:   719 SFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPI 778
             S SVP+ +EVVDGGLAF+HY  TGN+FLRLCTGA P T+DYD QHC+DL+L+PP V  PI
Sbjct:   746 SRSVPSFNEVVDGGLAFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPPHVHKPI 805

Query:   779 YGW 781
             +GW
Sbjct:   806 FGW 808
GO:0009058 "biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS;IMP
GO:0006869 "lipid transport" evidence=TAS
GO:0019375 "galactolipid biosynthetic process" evidence=RCA;IDA
GO:0046480 "galactolipid galactosyltransferase activity" evidence=IDA
GO:0009707 "chloroplast outer membrane" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0035250 "UDP-galactosyltransferase activity" evidence=TAS
GO:0042550 "photosystem I stabilization" evidence=TAS
GO:0001666 "response to hypoxia" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
TAIR|locus:2126998 DGD2 "digalactosyl diacylglycerol deficient 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S7D1DGDG1_ARATH2, ., 4, ., 1, ., 2, 4, 10.71170.96540.9331yesno
Q6DW74DGDG1_LOTJA2, ., 4, ., 1, ., 2, 4, 10.78840.98970.9834N/Ano
Q6DW76DGDG1_SOYBN2, ., 4, ., 1, ., 2, 4, 10.77170.98710.9846yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.2410.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00038899001
SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (782 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00006408001
SubName- Full=Chromosome chr11 scaffold_170, whole genome shotgun sequence; (394 aa)
     •• 0.929
GSVIVG00032804001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (525 aa)
     •• 0.928

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query781
PLN02501794 PLN02501, PLN02501, digalactosyldiacylglycerol syn 0.0
PLN02846462 PLN02846, PLN02846, digalactosyldiacylglycerol syn 0.0
COG0438381 COG0438, RfaG, Glycosyltransferase [Cell envelope 1e-11
cd03817374 cd03817, GT1_UGDG_like, This family is most closel 1e-10
pfam00534158 pfam00534, Glycos_transf_1, Glycosyl transferases 3e-10
cd03811353 cd03811, GT1_WabH_like, This family is most closel 4e-08
cd03798377 cd03798, GT1_wlbH_like, This family is most closel 4e-08
cd03801374 cd03801, GT1_YqgM_like, This family is most closel 2e-07
cd01635229 cd01635, Glycosyltransferase_GTB_type, Glycosyltra 2e-07
pfam13692134 pfam13692, Glyco_trans_1_4, Glycosyl transferases 3e-07
cd03820348 cd03820, GT1_amsD_like, This family is most closel 9e-06
pfam1352492 pfam13524, Glyco_trans_1_2, Glycosyl transferases 5e-05
cd03799355 cd03799, GT1_amsK_like, This is a family of GT1 gl 5e-04
cd03821375 cd03821, GT1_Bme6_like, This family is most closel 8e-04
>gnl|CDD|215277 PLN02501, PLN02501, digalactosyldiacylglycerol synthase Back     alignment and domain information 
 Score = 1459 bits (3779), Expect = 0.0
 Identities = 650/797 (81%), Positives = 712/797 (89%), Gaps = 26/797 (3%)

Query: 5   TQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANR-- 62
           +   SS+ AFSF+S+ WREVRDSADAD+QLM+ RANSFKNLA+SFDRE+ENF NSA+R  
Sbjct: 4   SMTLSSTNAFSFLSKGWREVRDSADADLQLMRARANSFKNLASSFDREIENFFNSASRSS 63

Query: 63  --------SSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRN 114
                   SS P EIDFVKKLQPKISEFRRVYSAPEIS++VLEKWGPRA++ IDLSAI+N
Sbjct: 64  FPVGSPSASSFPTEIDFVKKLQPKISEFRRVYSAPEISRKVLEKWGPRAKLGIDLSAIKN 123

Query: 115 AIVSDVDVDAERDGGGIIEFDRGKRGR---VGFRELWGERE------VGEWEPIRTLKMR 165
           AIV+++++D   D GGI+EFDR +R R   V F E WGE +       GEWEPIR LK R
Sbjct: 124 AIVAEMELD---DRGGIVEFDRVRRRRNSRVRFTEFWGEAKEEGEGQFGEWEPIRALKTR 180

Query: 166 LREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQ 225
            RE E++ E    EIFGGFK+S+FVEK+KSS KAI KEP+ESKDVPPLD  ELLA+LVRQ
Sbjct: 181 FRELEKRSESL--EIFGGFKNSEFVEKLKSSLKAIYKEPQESKDVPPLDVPELLAYLVRQ 238

Query: 226 SGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVL 285
           S PFLD LGV++D+CDKIVESLCSKRK QLLLRS++ GE S+LE+DN NDELDLRIASVL
Sbjct: 239 SEPFLDQLGVRKDICDKIVESLCSKRKNQLLLRSLSAGESSLLESDNHNDELDLRIASVL 298

Query: 286 QSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNV 345
           QSTGH Y+GGFWTD  K +LSD KR+VAIVTTASLPWMTGTAVNPLFRAAYLAK+ +QNV
Sbjct: 299 QSTGHCYDGGFWTDSSKHELSDGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNV 358

Query: 346 TLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERR 404
           TLLVPWLCKSDQELVYPN +TF SPEEQE+Y+RNWLEER+GFKADFKISFYPGKFSKERR
Sbjct: 359 TLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGKFSKERR 418

Query: 405 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREK 464
           SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREK
Sbjct: 419 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREK 478

Query: 465 NGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDR 524
           NGALQAFFVKHINNWVTRAYC KVLRLSAATQDLPKSVICNVHGVNPKFL+IGEKVA +R
Sbjct: 479 NGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAEER 538

Query: 525 EQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKR 584
           E GQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKN+LDGF LDVFGNGEDA+EVQ AAKR
Sbjct: 539 ELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKR 598

Query: 585 LDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRS 644
           LDLNLNF KGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFV+CADHPSNEFFRS
Sbjct: 599 LDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRS 658

Query: 645 FPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNKD 704
           FPNCLTYKTSEDFVA+VKEALAN+PQPLTPEQRYNLSWEAATQRF+EYS+L+++LNN  D
Sbjct: 659 FPNCLTYKTSEDFVAKVKEALANEPQPLTPEQRYNLSWEAATQRFMEYSDLDKVLNNGDD 718

Query: 705 DAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHC 764
               S++ GK I KS S+PNLSE+VDGGLAFAHYC TGNEFLRLCTGAIPGTRDYDKQHC
Sbjct: 719 AKL-SKSGGKSITKSVSMPNLSEMVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHC 777

Query: 765 RDLHLLPPQVENPIYGW 781
           +DLHLLPP VENPIYGW
Sbjct: 778 KDLHLLPPHVENPIYGW 794

Length = 794
>gnl|CDD|166487 PLN02846, PLN02846, digalactosyldiacylglycerol synthase Back     alignment and domain information
>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 781
PLN02501794 digalactosyldiacylglycerol synthase 100.0
PLN02846462 digalactosyldiacylglycerol synthase 100.0
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 100.0
PRK10307412 putative glycosyl transferase; Provisional 100.0
cd03796398 GT1_PIG-A_like This family is most closely related 100.0
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 100.0
cd04962371 GT1_like_5 This family is most closely related to 100.0
cd03814364 GT1_like_2 This family is most closely related to 100.0
PLN02939977 transferase, transferring glycosyl groups 100.0
PRK00654466 glgA glycogen synthase; Provisional 100.0
cd03817374 GT1_UGDG_like This family is most closely related 100.0
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 100.0
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 100.0
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 100.0
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 100.0
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 100.0
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 100.0
cd03805392 GT1_ALG2_like This family is most closely related 100.0
cd03821375 GT1_Bme6_like This family is most closely related 100.0
PLN023161036 synthase/transferase 100.0
cd03802335 GT1_AviGT4_like This family is most closely relate 100.0
cd04955363 GT1_like_6 This family is most closely related to 100.0
PRK14099485 glycogen synthase; Provisional 99.98
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 99.98
cd03801374 GT1_YqgM_like This family is most closely related 99.98
PRK14098489 glycogen synthase; Provisional 99.98
cd04951360 GT1_WbdM_like This family is most closely related 99.98
cd03812358 GT1_CapH_like This family is most closely related 99.97
cd03820348 GT1_amsD_like This family is most closely related 99.97
cd03794394 GT1_wbuB_like This family is most closely related 99.97
cd03822366 GT1_ecORF704_like This family is most closely rela 99.97
KOG1111426 consensus N-acetylglucosaminyltransferase complex, 99.97
cd03807365 GT1_WbnK_like This family is most closely related 99.97
cd03795357 GT1_like_4 This family is most closely related to 99.97
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 99.97
cd03816415 GT1_ALG1_like This family is most closely related 99.97
cd03800398 GT1_Sucrose_synthase This family is most closely r 99.97
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.97
cd03809365 GT1_mtfB_like This family is most closely related 99.97
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 99.97
cd03798377 GT1_wlbH_like This family is most closely related 99.97
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 99.97
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 99.97
cd03818396 GT1_ExpC_like This family is most closely related 99.97
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 99.97
cd03825365 GT1_wcfI_like This family is most closely related 99.97
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 99.97
cd03813475 GT1_like_3 This family is most closely related to 99.97
cd03823359 GT1_ExpE7_like This family is most closely related 99.96
TIGR02470784 sucr_synth sucrose synthase. This model represents 99.96
cd03808359 GT1_cap1E_like This family is most closely related 99.96
cd03811353 GT1_WabH_like This family is most closely related 99.96
cd03819355 GT1_WavL_like This family is most closely related 99.96
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 99.96
PLN00142815 sucrose synthase 99.96
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 99.95
PLN02275371 transferase, transferring glycosyl groups 99.95
PRK10125405 putative glycosyl transferase; Provisional 99.95
PLN02949463 transferase, transferring glycosyl groups 99.95
cd04946407 GT1_AmsK_like This family is most closely related 99.95
cd03804351 GT1_wbaZ_like This family is most closely related 99.95
cd03806419 GT1_ALG11_like This family is most closely related 99.94
cd04949372 GT1_gtfA_like This family is most closely related 99.94
PHA01630331 putative group 1 glycosyl transferase 99.92
PHA01633335 putative glycosyl transferase group 1 99.92
PRK13609380 diacylglycerol glucosyltransferase; Provisional 99.89
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 99.88
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 99.88
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 99.87
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 99.87
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 99.86
PRK13608391 diacylglycerol glucosyltransferase; Provisional 99.85
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 99.85
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 99.85
PLN02605382 monogalactosyldiacylglycerol synthase 99.85
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 99.84
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 99.84
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 99.82
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.81
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 99.81
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 99.74
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 99.74
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 99.74
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 99.72
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 99.69
KOG0853495 consensus Glycosyltransferase [Cell wall/membrane/ 99.61
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 99.6
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 99.58
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 99.58
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 99.51
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.45
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 99.44
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 99.3
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 99.26
KOG2941444 consensus Beta-1,4-mannosyltransferase [Posttransl 99.23
PF05693633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 99.05
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 98.97
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 98.97
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 98.9
TIGR02919438 accessory Sec system glycosyltransferase GtfB. Mem 98.89
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 98.88
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 98.85
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 98.82
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 98.71
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 98.62
TIGR03492396 conserved hypothetical protein. This protein famil 98.52
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 98.5
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 98.45
PRK10117474 trehalose-6-phosphate synthase; Provisional 98.4
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 98.3
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 98.26
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 98.2
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 98.16
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 98.15
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 98.14
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 98.08
COG0763381 LpxB Lipid A disaccharide synthetase [Cell envelop 98.07
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 97.98
PHA03392507 egt ecdysteroid UDP-glucosyltransferase; Provision 97.97
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 97.9
COG0381383 WecB UDP-N-acetylglucosamine 2-epimerase [Cell env 97.84
PRK01021608 lpxB lipid-A-disaccharide synthase; Reviewed 97.83
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 97.77
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 97.67
TIGR00661321 MJ1255 conserved hypothetical protein. This model 97.61
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 97.54
COG4641373 Uncharacterized protein conserved in bacteria [Fun 97.18
COG1817346 Uncharacterized protein conserved in archaea [Func 96.87
COG3980318 spsG Spore coat polysaccharide biosynthesis protei 96.62
PRK14089347 ipid-A-disaccharide synthase; Provisional 96.59
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 96.58
PF04101167 Glyco_tran_28_C: Glycosyltransferase family 28 C-t 96.46
PF06258311 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP 95.85
COG3660329 Predicted nucleoside-diphosphate-sugar epimerase [ 95.72
COG1819406 Glycosyl transferases, related to UDP-glucuronosyl 95.19
KOG3742692 consensus Glycogen synthase [Carbohydrate transpor 93.82
COG4671400 Predicted glycosyl transferase [General function p 93.56
PF05159269 Capsule_synth: Capsule polysaccharide biosynthesis 93.07
PLN03004451 UDP-glycosyltransferase 92.73
PLN02448459 UDP-glycosyltransferase family protein 92.09
PRK02797322 4-alpha-L-fucosyltransferase; Provisional 91.75
PLN02670472 transferase, transferring glycosyl groups 91.59
PF07429360 Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc 90.9
cd03789279 GT1_LPS_heptosyltransferase Lipopolysaccharide hep 90.8
PF00201500 UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera 90.51
TIGR02193319 heptsyl_trn_I lipopolysaccharide heptosyltransfera 89.15
PLN02562448 UDP-glycosyltransferase 88.32
PLN03007482 UDP-glucosyltransferase family protein 87.58
PF01075247 Glyco_transf_9: Glycosyltransferase family 9 (hept 87.27
PF04464369 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate 87.2
TIGR02195334 heptsyl_trn_II lipopolysaccharide heptosyltransfer 87.17
TIGR03609298 S_layer_CsaB polysaccharide pyruvyl transferase Cs 85.17
PLN02764453 glycosyltransferase family protein 84.91
PLN02992481 coniferyl-alcohol glucosyltransferase 84.03
COG0859334 RfaF ADP-heptose:LPS heptosyltransferase [Cell env 83.74
PLN02208442 glycosyltransferase family protein 83.06
PLN00414446 glycosyltransferase family protein 83.04
PRK10017426 colanic acid biosynthesis protein; Provisional 82.87
PRK10964322 ADP-heptose:LPS heptosyl transferase I; Provisiona 82.45
PLN02863477 UDP-glucoronosyl/UDP-glucosyl transferase family p 82.05
PLN00164480 glucosyltransferase; Provisional 82.04
PF1008797 DUF2325: Uncharacterized protein conserved in bact 81.65
PLN02167475 UDP-glycosyltransferase family protein 80.49
PLN02554481 UDP-glycosyltransferase family protein 80.34
PLN02410451 UDP-glucoronosyl/UDP-glucosyl transferase family p 80.08
PLN02173449 UDP-glucosyl transferase family protein 80.05
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information 
Probab=100.00  E-value=6.1e-202  Score=1703.48  Aligned_cols=772  Identities=84%  Similarity=1.337  Sum_probs=723.5

Q ss_pred             CCCCCCcccchhhhhhhhHHhhcchhhhHHHHHHhhhhhhhhhhhhhHHHHHHhhccCCC----------CCchhhhHHH
Q 003992            4 ETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRS----------SAPAEIDFVK   73 (781)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~   73 (781)
                      .+++.++++||||||||||||||||+|||||||+|||||||||++|||||||||||||++          +|++|+|||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~v~~sa~~~~~l~~~~~~s~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (794)
T PLN02501          3 LSMTLSSTNAFSFLSKGWREVRDSADADLQLMRARANSFKNLASSFDREIENFFNSASRSSFPVGSPSASSFPTEIDFVK   82 (794)
T ss_pred             cceeccCcchHHHHHhhHHHhhhcchhhHHHHHHHhhhhhhhhhhhHHHHHHHhhhccccccCCCCcccCCCccchHHHH
Confidence            456778889999999999999999999999999999999999999999999999999983          8999999999


Q ss_pred             hhcchhhhhhhccCchhhhHHHhhhcCCCcceeechhhhhhhhhcccccccccCCCccccccccc---cccccccccccc
Q 003992           74 KLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGK---RGRVGFRELWGE  150 (781)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  150 (781)
                      +||||||||||+||+|+|++||||+|+|++++||||||||||||++++   ++++.|+|+++|+|   +.|.||++||++
T Consensus        83 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~lsai~~a~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  159 (794)
T PLN02501         83 KLQPKISEFRRVYSAPEISRKVLEKWGPRAKLGIDLSAIKNAIVAEME---LDDRGGIVEFDRVRRRRNSRVRFTEFWGE  159 (794)
T ss_pred             HhchhHHHHhhhccCchhhhhhhhccCCcccccccHHHHhhhhccccc---cccccCcccccccccccccccchhhhhhh
Confidence            999999999999999999999999999999999999999999999865   45689999986654   335678889884


Q ss_pred             ------ccCCcchhHHHHHHHHHHHHHhhcchhhhHhcCCCchhHHHHHHhhhhhhccCCCCCCCCCCCChHHHHHHHHh
Q 003992          151 ------REVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVR  224 (781)
Q Consensus       151 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (781)
                            ++.+|||||||||.+|||||||++++  |||+||||+|||||||+|||+|||||++||||||||||||||||||
T Consensus       160 ~~~~~~~~~~~~~~~r~~~~~~~e~e~~~~~~--~~~~~~~~~~~~~k~k~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (794)
T PLN02501        160 AKEEGEGQFGEWEPIRALKTRFRELEKRSESL--EIFGGFKNSEFVEKLKSSLKAIYKEPQESKDVPPLDVPELLAYLVR  237 (794)
T ss_pred             hhhcccccccchhhHHHHHHHHHHHHhhcchH--HHhcccchHHHHHHHHHHHHhhhcCccccccCCCcchHHHHHHHHh
Confidence                  44899999999999999999999998  9999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccccchhhhHHHHHHHhhhhhhhhhhhhcccCCCcccccccCCcccccccccccccccccccCCccccCCCCC
Q 003992          225 QSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDD  304 (781)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (781)
                      ||||||||||||||+||||||+||||||+|++||++|++++++++|++.+|+||||||||||||||||+||||||+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (794)
T PLN02501        238 QSEPFLDQLGVRKDICDKIVESLCSKRKNQLLLRSLSAGESSLLESDNHNDELDLRIASVLQSTGHCYDGGFWTDSSKHE  317 (794)
T ss_pred             hccchhhhhhhhHHHHHHHHHHHHhhccccccccccccccccccccccccccchhhhhhhhhccCccccCCcccCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCcccccc-ccccCCchhhHHHHHHHHHh
Q 003992          305 LSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEER  383 (781)
Q Consensus       305 ~~~~~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~-i~f~~p~~qe~yir~~l~~r  383 (781)
                      +.+++++|+||||+.+|||||+++||++||+|||+.|.++||+|+|||+..||+.|||+ ++|.+|++|+.|++.|++++
T Consensus       318 ~~~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r  397 (794)
T PLN02501        318 LSDGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEER  397 (794)
T ss_pred             cccCCCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999988899999999999999999997 99999999999999999999


Q ss_pred             hCCcccceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcCCEEEEEECCcHHHHHHh
Q 003992          384 VGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE  463 (781)
Q Consensus       384 ig~~~~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~pvV~ivHt~y~~y~~~~  463 (781)
                      +|+++++.|.|||++|+.+.+||+|++++.+.|++++|||||+++|++++|++||++|+++++|+|+++||+|.+|..++
T Consensus       398 ~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~PVVasyHTny~eYl~~y  477 (794)
T PLN02501        398 IGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE  477 (794)
T ss_pred             cCCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcCCeEEEEeCCcHHHHhHh
Confidence            99999999999999999999999999999999999999999999999999997789999999999999999999999999


Q ss_pred             hcchhHHHHHHHHHHHHHHhcCCEEEEcChhhhhcCCCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccC
Q 003992          464 KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVW  543 (781)
Q Consensus       464 ~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~l~~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~  543 (781)
                      +.+.+..++.+.+++++.++|||.||++|..+++++..++.++||||+++|.+..+...+..+|+..+.+.++|+||+.+
T Consensus       478 ~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~L~~~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRLa~  557 (794)
T PLN02501        478 KNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVW  557 (794)
T ss_pred             cchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHHhcccceeecccccccccCCcchhHHHHhcCCccccCceEEEEcccc
Confidence            88888888888999999988899999999999988877777779999999998766544556676655677999999999


Q ss_pred             ccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHH
Q 003992          544 AKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAE  623 (781)
Q Consensus       544 ~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLE  623 (781)
                      +||++.||+|+..+.++.++++|+|+|+||++++++++++++++.|.|+|+.++...+|+.+||||+||.+|+||++++|
T Consensus       558 EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLE  637 (794)
T PLN02501        558 AKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAE  637 (794)
T ss_pred             cCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHH
Confidence            99999999999999887889999999999999999999999998999999999988899999999999999999999999


Q ss_pred             HHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHhCCCCCCChHHHHcCCHHHHHHHHHHHhhhccccccCC
Q 003992          624 ALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEYSELNRILNNNK  703 (781)
Q Consensus       624 AMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m~~~~~fSWe~iaerll~~Ye~~~vl~~~~  703 (781)
                      |||||+|||++++|++.++.++.+|+.++|+++|+++|.+++.+++.+..+.....+||++++++++++.+++++++...
T Consensus       638 AMA~GlPVVATd~pG~e~V~~g~nGll~~D~EafAeAI~~LLsd~~~rl~~~a~~~~SWeAaadrLle~~~~~~~~~~~~  717 (794)
T PLN02501        638 ALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKEALANEPQPLTPEQRYNLSWEAATQRFMEYSDLDKVLNNGD  717 (794)
T ss_pred             HHHcCCCEEEecCCCCceEeecCCeEecCCHHHHHHHHHHHHhCchhhhHHHHHhhCCHHHHHHHHHHhhcccccccccc
Confidence            99999999999999988877788999899999999999999999887766777789999999999999999999987632


Q ss_pred             CCcccccccccccccccCCCCcccccccchhhhhhhccchhhhhhhcCCCCCCCCCchhhhhcCCCCCCCCCCCCCCC
Q 003992          704 DDAKSSRNDGKIIRKSFSVPNLSEVVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCRDLHLLPPQVENPIYGW  781 (781)
Q Consensus       704 ~~~~~~~~r~~~~~~s~~~p~l~~i~d~~~A~~h~~l~g~e~~r~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  781 (781)
                      . ........+.+..+.+.|+++.++|+++||.|||++|+|++|+|+||+|||+|||+|||+||||+||++++|+|||
T Consensus       718 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~g~~~~r~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  794 (794)
T PLN02501        718 D-AKLSKSGGKSITKSVSMPNLSEMVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPHVENPIYGW  794 (794)
T ss_pred             c-cccccccccchhhhccCCcHHHHhhhHHHHHHHHhhccHHHHHHhcCCCCCCCcCHHHHHhcCCCCCCCCCCCCCC
Confidence            1 2223344455666677889999999999999999999999999999999999999999999999999999999999

>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>TIGR02919 accessory Sec system glycosyltransferase GtfB Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG1817 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14089 ipid-A-disaccharide synthase; Provisional Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins Back     alignment and domain information
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Back     alignment and domain information
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT Back     alignment and domain information
>PLN03004 UDP-glycosyltransferase Back     alignment and domain information
>PLN02448 UDP-glycosyltransferase family protein Back     alignment and domain information
>PRK02797 4-alpha-L-fucosyltransferase; Provisional Back     alignment and domain information
>PLN02670 transferase, transferring glycosyl groups Back     alignment and domain information
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) Back     alignment and domain information
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) Back     alignment and domain information
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule Back     alignment and domain information
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I Back     alignment and domain information
>PLN02562 UDP-glycosyltransferase Back     alignment and domain information
>PLN03007 UDP-glucosyltransferase family protein Back     alignment and domain information
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria Back     alignment and domain information
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II Back     alignment and domain information
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB Back     alignment and domain information
>PLN02764 glycosyltransferase family protein Back     alignment and domain information
>PLN02992 coniferyl-alcohol glucosyltransferase Back     alignment and domain information
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02208 glycosyltransferase family protein Back     alignment and domain information
>PLN00414 glycosyltransferase family protein Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional Back     alignment and domain information
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN00164 glucosyltransferase; Provisional Back     alignment and domain information
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>PLN02167 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN02554 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02173 UDP-glucosyl transferase family protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query781
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 4e-08
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 6e-08
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 3e-06
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 3e-05
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 1e-04
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 77.2 bits (189), Expect = 1e-14
 Identities = 90/676 (13%), Positives = 190/676 (28%), Gaps = 208/676 (30%)

Query: 109 LSAIRNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVGEWEPIRTLKMRLRE 168
           LS   +A V + D    +D   + +  +    +     +   ++        TL++    
Sbjct: 22  LSVFEDAFVDNFDC---KD---VQDMPKSILSKEEIDHIIMSKDAVS----GTLRL-FWT 70

Query: 169 FERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKD--VPPLDPTELLAHLVRQS 226
              K+E  V++        ++ + + S  K   ++P       +   D       L   +
Sbjct: 71  LLSKQEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDR------LYNDN 123

Query: 227 GPFLDHLGVKR-DLCDKIVESLCSKRKEQ-LLLRSIAG-GECSVLENDNINDELDLRIAS 283
             F  +  V R     K+ ++L   R  + +L+  + G G+ + +               
Sbjct: 124 QVFAKY-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK-TWV------------ALD 169

Query: 284 VLQSTG--HHYEGG-FWTDFGKDD--------------LSDKKRNVAIVTTASLPWMTGT 326
           V  S       +   FW +    +                D         ++++     +
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 327 AVNPLFRAAYLAKTEQQNVTLLV------PWL-------CK------------------- 354
               L R   L K++     LLV                CK                   
Sbjct: 230 IQAELRR---LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 355 SDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQ 414
           +   L + ++T  +P+E ++ +  +L+ R            P    +E  +  P      
Sbjct: 287 THISLDHHSMTL-TPDEVKSLLLKYLDCR------------PQDLPREVLTTNPRR---- 329

Query: 415 FIPSKDADIAILEE--PEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFF 472
                   ++I+ E   + L        W             +  +++  +K   +    
Sbjct: 330 --------LSIIAESIRDGLA------TW-------------DNWKHVNCDKLTTIIESS 362

Query: 473 VKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQI--GEKVATDREQGQQA 530
           +  +     R   D+   LS      P S       +    L +   + + +D       
Sbjct: 363 LNVLEPAEYRKMFDR---LSV----FPPSA-----HIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 531 FSKGAYFLGKMVWAKGYRELIDLL-----------AKHKNDLDGFKL-------DVFGNG 572
             K  Y L +    +    +  +            A H++ +D + +       D+    
Sbjct: 411 LHK--YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 573 EDAY---------------EVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVL 617
            D Y               E  +  + + L+  F + +   D +       I  ++    
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ-- 526

Query: 618 CTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDP------QP 671
                  L   K  IC + P  E               DF+ +++E L            
Sbjct: 527 -------LKFYKPYICDNDPKYE--------RLVNAILDFLPKIEENLICSKYTDLLRIA 571

Query: 672 LTPEQRYNLSWEAATQ 687
           L  E    +  EA  Q
Sbjct: 572 LMAEDEA-IFEEAHKQ 586
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query781
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 100.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 100.0
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 100.0
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 100.0
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 100.0
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 100.0
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 100.0
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 100.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 100.0
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 100.0
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 100.0
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 100.0
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 100.0
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 99.98
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.96
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 99.95
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 99.95
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 99.95
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 99.93
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.92
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 99.91
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 99.91
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 99.91
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 99.9
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 99.89
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 99.86
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 99.85
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 99.84
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.75
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.72
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.64
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 99.64
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.62
2iyf_A430 OLED, oleandomycin glycosyltransferase; antibiotic 99.62
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 99.61
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 99.59
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 99.51
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 99.48
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 99.44
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 99.41
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 99.34
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 99.28
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 99.1
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 99.04
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 99.01
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 98.89
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 98.85
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 98.77
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 98.75
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 98.0
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 97.92
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 97.88
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 97.71
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 97.69
2vch_A480 Hydroquinone glucosyltransferase; glycosyltransfer 96.72
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 95.91
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 95.42
2c1x_A456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 95.03
2gt1_A326 Lipopolysaccharide heptosyltransferase-1; GT-B fol 94.68
3tov_A349 Glycosyl transferase family 9; structural genomics 94.53
2pq6_A482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 94.33
3hbf_A454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 92.97
2acv_A463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 92.32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-37  Score=340.30  Aligned_cols=375  Identities=13%  Similarity=0.114  Sum_probs=260.3

Q ss_pred             CCCEEEEEeCccCC-CcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCcccccccc-ccCCchhhHHHHHHHHHhhC
Q 003992          308 KKRNVAIVTTASLP-WMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVT-FCSPEEQENYMRNWLEERVG  385 (781)
Q Consensus       308 ~~~rIaI~TtaflP-~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~-f~~p~~qe~yir~~l~~rig  385 (781)
                      ++|||+++|..|+| ..+|++......|.+|++.|| +|++++|.......... ..+. +........     .   ..
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~-~V~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~---~~   70 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGH-EVLVFTPSHGRFQGEEI-GKIRVFGEEVQVKV-----S---YE   70 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTC-EEEEEEECTTCSCCEEE-EEEEETTEEEEEEE-----E---EE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCchhhhh-ccccccCcccceee-----e---ec
Confidence            47999999999998 778888777888999999996 99999986443221100 0000 000000000     0   00


Q ss_pred             CcccceeeccCCc-------cc---cc-cccc----CchHhHHhhc--ccCCCcEEEECCCchhHHHHHHHHHHhhcC-C
Q 003992          386 FKADFKISFYPGK-------FS---KE-RRSI----IPAGDTSQFI--PSKDADIAILEEPEHLNWYHHGKRWTDKFN-H  447 (781)
Q Consensus       386 ~~~~~~i~~yP~~-------~~---~~-~~si----l~v~~L~k~I--~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-p  447 (781)
                      ...++.+..++..       +.   .. ...+    ..+..+.+.+  +..+|||||++.+.. +...  ..+++..+ |
T Consensus        71 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~-~~~~--~~~~~~~~~~  147 (439)
T 3fro_A           71 ERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAG--ALIKKYFKIP  147 (439)
T ss_dssp             EETTEEEEEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG-HHHH--HHHHHHHCCC
T ss_pred             cCCCceEEEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh-hhhH--HHHhhccCCC
Confidence            0011111111110       00   00 0000    0011122222  256999999997543 2222  33445556 9


Q ss_pred             EEEEEECCcHH----HHHHhhcchhH---HHHHHHHHHHHHHhcCCEEEEcChhhhh--------cCCCcEEeeCCCCCC
Q 003992          448 VVGVVHTNYLE----YIKREKNGALQ---AFFVKHINNWVTRAYCDKVLRLSAATQD--------LPKSVICNVHGVNPK  512 (781)
Q Consensus       448 vV~ivHt~y~~----y~~~~~~~~~~---~~l~k~l~r~l~r~~aD~VI~vS~~~k~--------l~~kivvi~nGVD~~  512 (781)
                      +|.++|+.+..    .......  ..   ......+.+...+ .+|.|+++|+..++        ...++.+++||||.+
T Consensus       148 ~v~~~h~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~  224 (439)
T 3fro_A          148 AVFTIHRLNKSKLPAFYFHEAG--LSELAPYPDIDPEHTGGY-IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCS  224 (439)
T ss_dssp             EEEEESCCCCCCEEHHHHHHTT--CGGGCCSSEECHHHHHHH-HCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTT
T ss_pred             EEEEecccccccCchHHhCccc--cccccccceeeHhhhhhh-hccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCch
Confidence            99999987532    1100000  00   0000123344444 69999999997654        235789999999998


Q ss_pred             CCCCC--------cchhhHhhhCcCCCCcEEEEEeecc-CccCHHHHHHHHHHhhccC--CCcEEEEEeCCCCH--HHHH
Q 003992          513 FLQIG--------EKVATDREQGQQAFSKGAYFLGKMV-WAKGYRELIDLLAKHKNDL--DGFKLDVFGNGEDA--YEVQ  579 (781)
Q Consensus       513 ~f~p~--------~~~~~r~~~Gi~~~~~~ILfVGRL~-~~KGid~LLeA~~~L~~~~--p~i~LvIVG~Gp~~--~~L~  579 (781)
                      .|.+.        .+...+++++++++ ++++|+|++. +.||++.+++|+..+.++.  ++++|+|+|+|+..  +.++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~  303 (439)
T 3fro_A          225 FWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWAR  303 (439)
T ss_dssp             TSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHH
T ss_pred             hcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHH
Confidence            88765        23445677888776 9999999999 9999999999999998876  89999999999987  8999


Q ss_pred             HHHHhcCCc-EEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCcccc--CCCH
Q 003992          580 SAAKRLDLN-LNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLT--YKTS  654 (781)
Q Consensus       580 ~~a~~lgL~-V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~--~~D~  654 (781)
                      +++++++ + +.|+|++++.+  .+|+.||++|+||.+|+||++++||||||+|||+|+.|+...++...+|+.  .+|+
T Consensus       304 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~~~~d~  382 (439)
T 3fro_A          304 SLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDP  382 (439)
T ss_dssp             HHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEECTTCH
T ss_pred             HHHhhcC-CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEeCCCCH
Confidence            9999988 6 88999888766  899999999999999999999999999999999999998876654336643  3799


Q ss_pred             HHHHHHHHHHHh-CCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhccccccC
Q 003992          655 EDFVARVKEALA-NDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRILNNN  702 (781)
Q Consensus       655 eeLa~aI~~LL~-d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl~~~  702 (781)
                      ++++++|.++++ +++.+.+|     +..++|||+.++++++++|+  +++++.
T Consensus       383 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~  434 (439)
T 3fro_A          383 GELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYT--GSIDRA  434 (439)
T ss_dssp             HHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHH--TCSCCB
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH--HHHHhh
Confidence            999999999999 88888877     23367999999999999999  777543
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Back     alignment and structure
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* Back     alignment and structure
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Back     alignment and structure
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* Back     alignment and structure
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 781
d1rzua_477 c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte 8e-04
d2bisa1437 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro 0.001
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.4 bits (93), Expect = 8e-04
 Identities = 32/289 (11%), Positives = 73/289 (25%), Gaps = 31/289 (10%)

Query: 434 WYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSA 493
             ++      K         +        E    +           V  +    +  +  
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEE----ILTAEFGMGLEGVIGSRAHVLHGIVN 246

Query: 494 ATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAY------FLGKMVWAKGY 547
                  +   +    +       +  A +++   + F            + ++ W KG 
Sbjct: 247 GIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGI 306

Query: 548 RELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSL--HGY 605
             + + + +  +      +   G+      + +AA R    +    G +     L   G 
Sbjct: 307 DLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGC 366

Query: 606 KVFINPSISDVLCTATAEALAMGKFVICADHPS-------NEFFRSFPNCLT-----YKT 653
              I PS  +        AL  G   + A                      T       T
Sbjct: 367 DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT 426

Query: 654 SEDFVARVKEALANDPQPLTPEQ------RYNLSWEAATQRFIE-YSEL 695
            +     ++  +     P    Q      + ++SWE +   +   YS+L
Sbjct: 427 LDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQL 475
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query781
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 100.0
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 100.0
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 99.97
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.87
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 99.82
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 99.79
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 98.56
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 98.5
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 98.45
d1v4va_373 UDP-N-acetylglucosamine 2-epimerase {Thermus therm 97.98
d1iira_401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 97.96
d1o6ca_377 UDP-N-acetylglucosamine 2-epimerase {Bacillus subt 97.51
d2c1xa1450 UDP glucose:flavonoid 3-o-glucosyltransferase {Gra 97.13
d1f6da_376 UDP-N-acetylglucosamine 2-epimerase {Escherichia c 96.95
d2acva1461 Triterpene UDP-glucosyl transferase UGT71G1 {Medic 96.81
d2pq6a1473 (Iso)flavonoid glycosyltransferase {Medicago trunc 93.6
d1pswa_348 ADP-heptose LPS heptosyltransferase II {Escherichi 90.5
d2vcha1471 Hydroquinone glucosyltransferase {Thale cress (Ara 89.44
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 80.29
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=1.1e-33  Score=307.48  Aligned_cols=376  Identities=13%  Similarity=0.123  Sum_probs=239.9

Q ss_pred             CEEEEEeCccCCC-cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCCcc
Q 003992          310 RNVAIVTTASLPW-MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA  388 (781)
Q Consensus       310 ~rIaI~TtaflP~-~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~~~  388 (781)
                      |||+|||..|+|. .||.+......|.+|+++|| +|+|++|.......+... .+.... .+..... .+. .    ..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh-~V~Vvtp~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~-~----~~   71 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGH-EVLVFTPSHGRFQGEEIG-KIRVFG-EEVQVKV-SYE-E----RG   71 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTC-EEEEEEECTTSSCCEEEE-EEECSS-SEEEEEE-EEE-E----ET
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCC-EEEEEecCCCccchhhcc-ceeecc-cccceee-eee-c----cC
Confidence            8999999999998 46777666778999999996 999999865432211110 000000 0000000 000 0    00


Q ss_pred             cceeeccCCc-------cccccccc---------CchHhHHhhcc-cCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEE
Q 003992          389 DFKISFYPGK-------FSKERRSI---------IPAGDTSQFIP-SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVG  450 (781)
Q Consensus       389 ~~~i~~yP~~-------~~~~~~si---------l~v~~L~k~I~-~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~  450 (781)
                      .+.+...+..       +.......         .....+..+++ ...|||||+|.+.. ++.+  ..+++..+ |++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~-~~~~--~~~~~~~~~~~v~  148 (437)
T d2bisa1          72 NLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAG--ALIKKYFKIPAVF  148 (437)
T ss_dssp             TEEEEEEESSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGG-HHHH--HHHHHHHCCCEEE
T ss_pred             CeEEEecCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhh-hhHh--hhhhccccCceeE
Confidence            0111100000       00000000         00011223333 35689999987643 3433  45566667 9999


Q ss_pred             EEECCcHH----HHHHhhc-chhHHHHHHHHHHHHHHhcCCEEEEcChhhhh--------cCCCcEEeeCCCCCCCCCCC
Q 003992          451 VVHTNYLE----YIKREKN-GALQAFFVKHINNWVTRAYCDKVLRLSAATQD--------LPKSVICNVHGVNPKFLQIG  517 (781)
Q Consensus       451 ivHt~y~~----y~~~~~~-~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~--------l~~kivvi~nGVD~~~f~p~  517 (781)
                      ++|.....    +...... ................+ .+|.+++++.....        ...++.+++||+|++.+.+.
T Consensus       149 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~  227 (437)
T d2bisa1         149 TIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGY-IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNES  227 (437)
T ss_dssp             EESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHH-HSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGG
T ss_pred             EEeeccccccchhhhhhccchhhhhHHHHHHHHHHHH-hhhhhcccchhhhhhhhhhhccccCceEEEeccccccccccc
Confidence            99975321    1111100 00000000011222222 58999999985432        34578899999998877543


Q ss_pred             cc--------hhhHhhhCcCCCCcEEEEEeeccC-ccCHHHHHHHHHHhhcc--CCCcEEEEEeCCCCH--HHHHHHHHh
Q 003992          518 EK--------VATDREQGQQAFSKGAYFLGKMVW-AKGYRELIDLLAKHKND--LDGFKLDVFGNGEDA--YEVQSAAKR  584 (781)
Q Consensus       518 ~~--------~~~r~~~Gi~~~~~~ILfVGRL~~-~KGid~LLeA~~~L~~~--~p~i~LvIVG~Gp~~--~~L~~~a~~  584 (781)
                      ..        .....++++. +.+.++|+|++.. .||++.+++|+..+..+  .++++|+|+|.|+..  ..++.+.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~  306 (437)
T d2bisa1         228 YLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK  306 (437)
T ss_dssp             GCCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHT
T ss_pred             ccchhhHHHHHhhhhhhhcc-CCceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccc
Confidence            11        1223445543 4688999999975 79999999999987543  478999999999765  234444444


Q ss_pred             cCCcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccc--cCCCHHHHHHH
Q 003992          585 LDLNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCL--TYKTSEDFVAR  660 (781)
Q Consensus       585 lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv--~~~D~eeLa~a  660 (781)
                      .+..+.|.|..+..+  .+|+.||++++||.+|++|++++||||||+|||+++.|+..+++.+.+|+  ..+|+++|+++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~  386 (437)
T d2bisa1         307 HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANA  386 (437)
T ss_dssp             CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHH
T ss_pred             cccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHH
Confidence            444477888877765  89999999999999999999999999999999999999987666655664  34899999999


Q ss_pred             HHHHHh-CCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhcccccc
Q 003992          661 VKEALA-NDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRILNN  701 (781)
Q Consensus       661 I~~LL~-d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl~~  701 (781)
                      |.++++ +++.+.+|     +.+++|||++++++++++|+  +++++
T Consensus       387 i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~--~~i~r  431 (437)
T d2bisa1         387 ILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYT--GSIDR  431 (437)
T ss_dssp             HHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHH--TCSCC
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHHHh
Confidence            999997 55666666     34568999999999999999  77653
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Back     information, alignment and structure
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure