Citrus Sinensis ID: 003998
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 780 | 2.2.26 [Sep-21-2011] | |||||||
| Q7Z2K6 | 904 | Endoplasmic reticulum met | yes | no | 0.889 | 0.767 | 0.274 | 1e-55 | |
| Q6UPR8 | 898 | Endoplasmic reticulum met | yes | no | 0.908 | 0.789 | 0.278 | 4e-55 | |
| Q3UVK0 | 898 | Endoplasmic reticulum met | yes | no | 0.906 | 0.787 | 0.276 | 2e-54 | |
| Q0VGW4 | 876 | Endoplasmic reticulum met | N/A | no | 0.898 | 0.800 | 0.276 | 3e-51 | |
| Q18600 | 895 | Uncharacterized zinc meta | yes | no | 0.351 | 0.306 | 0.380 | 4e-48 | |
| Q09216 | 895 | Uncharacterized protein B | no | no | 0.584 | 0.509 | 0.276 | 2e-43 | |
| O94702 | 822 | Uncharacterized zinc meta | yes | no | 0.285 | 0.271 | 0.339 | 2e-27 | |
| Q6CDE6 | 989 | Probable zinc metalloprot | yes | no | 0.282 | 0.222 | 0.312 | 6e-22 | |
| O94479 | 843 | Probable zinc metallopept | no | no | 0.262 | 0.243 | 0.323 | 5e-20 | |
| A3LW86 | 937 | Probable zinc metalloprot | yes | no | 0.414 | 0.344 | 0.262 | 4e-18 |
| >sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 220/801 (27%), Positives = 346/801 (43%), Gaps = 107/801 (13%)
Query: 7 KIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS 66
KI ++ GSF++ FLG S Y N TN+V+++ D +VL N HFD +S
Sbjct: 156 KISVDVQRPTGSFSIDFLGGFTSY-YDNITNVVVKLEPRDG--AQHAVLANCHFDSVANS 212
Query: 67 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVG 126
PGA D + MLE+ R+ S +IFLFNGAEE + +HGF+ H W +
Sbjct: 213 PGASDDAVSCSVMLEVLRVLSTSSEALHHAVIFLFNGAEENVLQASHGFITQHPWASLIR 272
Query: 127 AVINVEASGTGGLDLVCQSGPSS-WPSSVYAQSAIYPMAHSAAQDVFP--VIPGDTDYRI 183
A IN+EA+G GG +LV Q+GP + W Y +A +P A AQ+VF +IP DTD+RI
Sbjct: 273 AFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRI 332
Query: 184 FSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQNA 243
+ +D+G+IPG+D+ F+ GY YHT +DT DR+L S+Q GDN+ VLK + S L
Sbjct: 333 Y-RDFGNIPGIDLAFIENGYIYHTKYDTADRILTDSIQRAGDNILAVLKHLATSDML--- 388
Query: 244 HDRASFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSG 303
A K +FFD L F+I Y ++++ +V+ V + +
Sbjct: 389 -------AAASKYRHGNMVFFDVLGLFVIAYPSRIGSIINY--MVVMGVVLYLGKKFLQP 439
Query: 304 LHSWFATYSDFVKGMMIHATGKMLAIIFPIAFSVLRLLFSGYAMSWFAHPFLAFMMFIPC 363
H DF+ G+ I +++ + +V L G ++SW+ H +++ ++
Sbjct: 440 KHKTGNYKKDFLCGLGITLISWFTSLVTVLIIAVFISLI-GQSLSWYNHFYVSVCLYGTA 498
Query: 364 SLLGLLIPRSLWSHFPLSQDAMLLKTSKEALSDEARFWGAFGFYAMLTMAYLVAGLTGGF 423
++ +++ +L F + S + L E F + + + GL F
Sbjct: 499 TVAKIILIHTLAKRF------YYMNASAQYLG-EVFFDISLFVHCCFLVTLTYQGLCSAF 551
Query: 424 LTFIVATSMLPAWIFFCISINF--YGRRSLRSTLFYVVPLIPCITYSVYFGGFVVQFLIE 481
++ + P C+ +F +G + + FY++ + Y++Y V +
Sbjct: 552 ISAVWVA--FPLLTKLCVHKDFKQHGAQG-KFIAFYLLGMFIPYLYALYLIWAVFEMFTP 608
Query: 482 KMGMMGAFPSPYGYYVQDIVVAAAVGAVTGWCVGPLLPICGLWLARSSVLQFLLHLTVLA 541
+G G+ P D+V+A+ + T + ++LA+S+ L V A
Sbjct: 609 ILGRSGSEIPP------DVVLASILAGCTMILSSYFINF--IYLAKSTKKTMLTLTLVCA 660
Query: 542 ----LALSSQFFPYSTG----AHKRLVFQH---TFVTADANQIVESS------FDFSVVD 584
L S FFPYS+ KR+ QH TF + N + S FD++ +
Sbjct: 661 ITFLLVCSGTFFPYSSNPANPKPKRVFLQHMTRTFHDLEGNAVKRDSGIWINGFDYTGIS 720
Query: 585 SNSFLFLFKFAPEVAKELHIGPEFSLEAANVSQRETWMVLFPVSFLFSKSLKFPATSDEI 644
+ PE+ + E E A + ++ PV FL K+ PA E+
Sbjct: 721 H-----ITPHIPEINDSIRAHCE---ENAPLCGFPWYL---PVHFLIRKNWYLPAP--EV 767
Query: 645 SKQ---------YEYFPYLSTSKPHTTSGDGSRRVYLELSLGSLEEVWVAVLNITGPLSN 695
S + E P+ S +G Y+ GS LS
Sbjct: 768 SPRNPPHFRLISKEQTPWDSIKLTFEATGPSHMSFYVRAHKGST-------------LSQ 814
Query: 696 WSFADNKVPVPEIVDGGPPSYICRLSGSSHENWTFWLEAS----SPENLRVEVAVLDQVL 751
WS N PV G ++ G W FW+E PE + V VA+ L
Sbjct: 815 WSLG-NGTPV---TSKGGDYFVFYSHGLQASAWQFWIEVQVSEEHPEGM-VTVAIAAHYL 869
Query: 752 VDEAKK------LKGLFPDWT 766
E K+ LK FPDWT
Sbjct: 870 SGEDKRSPQLDALKEKFPDWT 890
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Within the ovary, required for the organization of somatic cells and oocytes into discrete follicular structures. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 4EC: .EC: -EC: .EC: - |
| >sp|Q6UPR8|ERMP1_RAT Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus GN=Ermp1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q3UVK0|ERMP1_MOUSE Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus GN=Ermp1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q0VGW4|ERMP1_XENLA Endoplasmic reticulum metallopeptidase 1 OS=Xenopus laevis GN=ermp1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q18600|YTV2_CAEEL Uncharacterized zinc metalloprotease C44B7.11 OS=Caenorhabditis elegans GN=C44B7.11 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q09216|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorhabditis elegans GN=B0495.7 PE=1 SV=2 | Back alignment and function description |
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| >sp|O94702|YC52_SCHPO Uncharacterized zinc metalloprotease C1259.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1259.02c PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6CDE6|M28P1_YARLI Probable zinc metalloprotease YALI0C01133g OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0C01133g PE=3 SV=1 | Back alignment and function description |
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| >sp|O94479|M28P1_SCHPO Probable zinc metallopeptidase C1919.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1919.12c PE=3 SV=1 | Back alignment and function description |
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| >sp|A3LW86|M28P1_PICST Probable zinc metalloprotease PICST_46351 (Fragment) OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PICST_46351 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 780 | ||||||
| 255547740 | 1086 | protein with unknown function [Ricinus c | 0.979 | 0.703 | 0.751 | 0.0 | |
| 225425460 | 873 | PREDICTED: endoplasmic reticulum metallo | 0.992 | 0.886 | 0.720 | 0.0 | |
| 356512367 | 868 | PREDICTED: endoplasmic reticulum metallo | 0.987 | 0.887 | 0.704 | 0.0 | |
| 356528256 | 858 | PREDICTED: endoplasmic reticulum metallo | 0.967 | 0.879 | 0.691 | 0.0 | |
| 449452901 | 872 | PREDICTED: endoplasmic reticulum metallo | 0.991 | 0.886 | 0.674 | 0.0 | |
| 449489240 | 872 | PREDICTED: LOW QUALITY PROTEIN: endoplas | 0.991 | 0.886 | 0.673 | 0.0 | |
| 297838477 | 873 | peptidase [Arabidopsis lyrata subsp. lyr | 0.991 | 0.885 | 0.627 | 0.0 | |
| 334183713 | 922 | Zn-dependent exopeptidase-like protein [ | 0.991 | 0.838 | 0.622 | 0.0 | |
| 145337255 | 872 | Zn-dependent exopeptidase-like protein [ | 0.989 | 0.885 | 0.624 | 0.0 | |
| 147838176 | 829 | hypothetical protein VITISV_011748 [Viti | 0.933 | 0.878 | 0.648 | 0.0 |
| >gi|255547740|ref|XP_002514927.1| protein with unknown function [Ricinus communis] gi|223545978|gb|EEF47481.1| protein with unknown function [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/764 (75%), Positives = 659/764 (86%)
Query: 7 KIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS 66
++EIEE VVNGSFNMIFLGHSISLGYRNHTNIVMRISS DS+DTDPSVL+NGHFD PL S
Sbjct: 98 RVEIEEEVVNGSFNMIFLGHSISLGYRNHTNIVMRISSVDSKDTDPSVLINGHFDSPLGS 157
Query: 67 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVG 126
PGAGDCGSCVASMLELAR+ DSGW+PPRPIIFLFNGAEELFMLGAHGFMK +KWR+S+G
Sbjct: 158 PGAGDCGSCVASMLELARVITDSGWVPPRPIIFLFNGAEELFMLGAHGFMKTYKWRNSIG 217
Query: 127 AVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQ 186
A INVEASG+GG DLVCQSGP +WPS VYAQSAIYPMAHSAAQDVFPVIPGDTDYR+FSQ
Sbjct: 218 ASINVEASGSGGPDLVCQSGPGAWPSLVYAQSAIYPMAHSAAQDVFPVIPGDTDYRMFSQ 277
Query: 187 DYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQNAHDR 246
DYG+IP LDIIFL+GGYYYHTS+DT+D+LLPGS+QARGDNL ++LKAF+NSSKL+ A +R
Sbjct: 278 DYGNIPSLDIIFLLGGYYYHTSYDTLDKLLPGSMQARGDNLLSILKAFTNSSKLRTAQER 337
Query: 247 ASFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHS 306
S AT DERA+FFDYL+WFMI+YSR + VLH IPI IF +PFFLRLL+SGL S
Sbjct: 338 ESLRATSNDYKDERAVFFDYLSWFMIFYSRRVSLVLHSIPIAIFFVMPFFLRLLDSGLQS 397
Query: 307 WFATYSDFVKGMMIHATGKMLAIIFPIAFSVLRLLFSGYAMSWFAHPFLAFMMFIPCSLL 366
FAT+ DFVKG ++HA+G +LAI P+ FS++RL FS +AM+WFAHPFLAFMMFIPCSL+
Sbjct: 398 SFATFYDFVKGFLLHASGILLAIALPVIFSIVRLFFSSHAMNWFAHPFLAFMMFIPCSLI 457
Query: 367 GLLIPRSLWSHFPLSQDAMLLKTSKEALSDEARFWGAFGFYAMLTMAYLVAGLTGGFLTF 426
GLLIPR +W+ FPLSQD +LK KEALS+EARFWGA+GFYA LT+AYL AGL+GGFLTF
Sbjct: 458 GLLIPRIVWNSFPLSQDVSVLKKPKEALSNEARFWGAYGFYACLTLAYLAAGLSGGFLTF 517
Query: 427 IVATSMLPAWIFFCISINFYGRRSLRSTLFYVVPLIPCITYSVYFGGFVVQFLIEKMGMM 486
+V+ MLPAWI F + I YG + LRS + Y++PLIPC+ YSVYFGGF+ QFLIEKMGMM
Sbjct: 518 LVSAFMLPAWICFNLYIKSYGHQPLRSAVIYIIPLIPCLIYSVYFGGFLAQFLIEKMGMM 577
Query: 487 GAFPSPYGYYVQDIVVAAAVGAVTGWCVGPLLPICGLWLARSSVLQFLLHLTVLALALSS 546
GA P PYGYY+ DIVVAA +G VTGWCVGPL+PICG WLARSS++QFLLH++VLALALSS
Sbjct: 578 GAVPPPYGYYITDIVVAAIIGVVTGWCVGPLVPICGHWLARSSIMQFLLHVSVLALALSS 637
Query: 547 QFFPYSTGAHKRLVFQHTFVTADANQIVESSFDFSVVDSNSFLFLFKFAPEVAKELHIGP 606
QFFPYS A KR+VFQHT VTADAN +V+ S+DFSVVDSNS LFLFK+APEVAK+LHIG
Sbjct: 638 QFFPYSNTAPKRVVFQHTIVTADANGVVDCSYDFSVVDSNSLLFLFKYAPEVAKDLHIGS 697
Query: 607 EFSLEAANVSQRETWMVLFPVSFLFSKSLKFPATSDEISKQYEYFPYLSTSKPHTTSGDG 666
+FS E A +S RETWM LFPVS LFS+SLKFPA SD+ISKQY FPYLS K HT + +G
Sbjct: 698 DFSFETAKLSHRETWMALFPVSLLFSRSLKFPARSDDISKQYRSFPYLSNYKAHTIASEG 757
Query: 667 SRRVYLELSLGSLEEVWVAVLNITGPLSNWSFADNKVPVPEIVDGGPPSYICRLSGSSHE 726
+RRVYLELSLG+LEEVWVAVLNITGPLS+WS ADNK+P PE VDGGP SYICRLSG+S +
Sbjct: 758 TRRVYLELSLGNLEEVWVAVLNITGPLSSWSLADNKLPAPEAVDGGPLSYICRLSGASDD 817
Query: 727 NWTFWLEASSPENLRVEVAVLDQVLVDEAKKLKGLFPDWTDVTA 770
W FWLEA+S +LRVE+AV+DQVL D AK LKGLFPDW T
Sbjct: 818 KWRFWLEANSSNDLRVELAVIDQVLSDGAKNLKGLFPDWRTCTG 861
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225425460|ref|XP_002279240.1| PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera] gi|297738431|emb|CBI27632.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356512367|ref|XP_003524891.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356528256|ref|XP_003532720.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449452901|ref|XP_004144197.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449489240|ref|XP_004158256.1| PREDICTED: LOW QUALITY PROTEIN: endoplasmic reticulum metallopeptidase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297838477|ref|XP_002887120.1| peptidase [Arabidopsis lyrata subsp. lyrata] gi|297332961|gb|EFH63379.1| peptidase [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|334183713|ref|NP_001185342.1| Zn-dependent exopeptidase-like protein [Arabidopsis thaliana] gi|332196522|gb|AEE34643.1| Zn-dependent exopeptidase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|145337255|ref|NP_176909.3| Zn-dependent exopeptidase-like protein [Arabidopsis thaliana] gi|332196521|gb|AEE34642.1| Zn-dependent exopeptidase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|147838176|emb|CAN74144.1| hypothetical protein VITISV_011748 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 780 | ||||||
| FB|FBgn0050047 | 879 | CG30047 [Drosophila melanogast | 0.421 | 0.374 | 0.358 | 2.2e-53 | |
| FB|FBgn0050043 | 878 | CG30043 [Drosophila melanogast | 0.592 | 0.526 | 0.300 | 4.1e-53 | |
| FB|FBgn0050049 | 878 | CG30049 [Drosophila melanogast | 0.460 | 0.408 | 0.337 | 3.7e-51 | |
| UNIPROTKB|E1C3Q6 | 885 | ERMP1 "Uncharacterized protein | 0.451 | 0.397 | 0.325 | 1.1e-49 | |
| FB|FBgn0034437 | 866 | CG10051 [Drosophila melanogast | 0.443 | 0.399 | 0.318 | 7.1e-48 | |
| UNIPROTKB|F1MI95 | 892 | ERMP1 "Uncharacterized protein | 0.451 | 0.394 | 0.351 | 2.4e-47 | |
| UNIPROTKB|F1SMM0 | 905 | ERMP1 "Uncharacterized protein | 0.453 | 0.391 | 0.348 | 2.6e-47 | |
| FB|FBgn0034436 | 891 | CG11961 [Drosophila melanogast | 0.583 | 0.510 | 0.274 | 7.3e-46 | |
| WB|WBGene00016631 | 895 | C44B7.11 [Caenorhabditis elega | 0.338 | 0.294 | 0.386 | 8.9e-46 | |
| UNIPROTKB|E7ER77 | 841 | ERMP1 "Endoplasmic reticulum m | 0.455 | 0.422 | 0.336 | 1.3e-45 |
| FB|FBgn0050047 CG30047 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 126/351 (35%), Positives = 204/351 (58%)
Query: 32 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGW 91
Y+ TN+V++ISS S + +L+N HFD SSPG+GD G+ V MLE+ R S
Sbjct: 146 YQGVTNVVVKISSRSSNSSS-YLLVNSHFDSKPSSPGSGDDGTMVVVMLEVLRQVAISDT 204
Query: 92 IPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDLVCQSGPSS-W 150
PI+FLFNGAEE + +HGF+ HKW + A+IN+E +G+GG DL+ QSGP++ W
Sbjct: 205 PFEHPIVFLFNGAEENPLEASHGFITQHKWAGNCKALINLEVAGSGGRDLLFQSGPNNPW 264
Query: 151 PSSVYAQSAIYPMAHSAAQDVFP--VIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTS 208
Y Q+A +P A + A+++F ++P DTD+RIF +DYG +PGLD+ + GY YHT
Sbjct: 265 LIKYYYQNAKHPFATTMAEEIFQSGILPSDTDFRIF-RDYGQLPGLDMAQISNGYVYHTI 323
Query: 209 HDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQNAHDRASFEATGIKNTDERAIFFDYLT 268
D V + S+Q+ GDN ++++AF+++ ++QN D +++ A+FFDYL
Sbjct: 324 FDNVQAVPIDSLQSSGDNALSLVRAFADAPEMQNPED----------HSEGHAVFFDYLG 373
Query: 269 WFMIYYSRSRATVLHGXXXXXXXXXXXXLRLLNSGLHS--WFATYSD-FVKGMMIHATGK 325
F +YY+ + VL+ LL G S S F +++H G
Sbjct: 374 LFFVYYTENTGIVLN-CCIAVASLVLVVCSLLRMGRESDVSIGRVSIWFAIILVLHVLGM 432
Query: 326 MLAIIFPIAFSVLRLLFSG-YAMSWFAHPFLAFMMFIPCSLLGLLIPRSLW 375
+L++ P+ +VL +G +M++F++ +L +FI +++G ++P +L+
Sbjct: 433 ILSLGLPLLMAVL--FDAGDRSMTYFSNNWLVIGLFIVPAIIGQILPLTLY 481
|
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| FB|FBgn0050043 CG30043 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0050049 CG30049 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C3Q6 ERMP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| FB|FBgn0034437 CG10051 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MI95 ERMP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SMM0 ERMP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| FB|FBgn0034436 CG11961 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| WB|WBGene00016631 C44B7.11 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E7ER77 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00002838001 | SubName- Full=Chromosome chr1 scaffold_136, whole genome shotgun sequence; (873 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 780 | |||
| cd03875 | 307 | cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasm | 1e-103 | |
| pfam04389 | 173 | pfam04389, Peptidase_M28, Peptidase family M28 | 4e-43 | |
| cd02690 | 252 | cd02690, M28, M28 Zn-peptidases include aminopepti | 2e-20 | |
| COG2234 | 435 | COG2234, Iap, Predicted aminopeptidases [General f | 6e-12 | |
| cd08015 | 275 | cd08015, M28_like_4, M28 Zn-Peptidases | 1e-10 | |
| cd08022 | 286 | cd08022, M28_PSMA_like, M28 Zn-peptidase prostate- | 4e-09 | |
| cd03877 | 254 | cd03877, M28_like_PA, M28 Zn-Peptidases containing | 6e-09 | |
| cd03874 | 279 | cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Trans | 3e-08 | |
| cd03873 | 237 | cd03873, Zinc_peptidase_like, Zinc peptidases M18, | 3e-08 | |
| COG0624 | 409 | COG0624, ArgE, Acetylornithine deacetylase/Succiny | 5e-07 | |
| cd03879 | 285 | cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibr | 1e-06 | |
| cd05642 | 348 | cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas | 1e-05 | |
| cd05640 | 279 | cd05640, M28_like_1, M28 Zn-Peptidases | 1e-05 | |
| cd05663 | 260 | cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptid | 3e-05 | |
| cd05643 | 288 | cd05643, M28_like_7, M28 Zn-Peptidases | 6e-05 | |
| cd05661 | 305 | cd05661, M28_like_PA_2, M28 Zn-Peptidases containi | 6e-05 | |
| cd03896 | 359 | cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar | 8e-05 | |
| cd08659 | 365 | cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo | 3e-04 | |
| cd03883 | 276 | cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma gl | 0.002 |
| >gnl|CDD|193497 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1 | Back alignment and domain information |
|---|
Score = 319 bits (819), Expect = e-103
Identities = 116/273 (42%), Positives = 163/273 (59%), Gaps = 14/273 (5%)
Query: 4 VIAKIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGP 63
+E+E GS + FLG ++ Y TNIV+RIS ++ ++ ++L+N H+D
Sbjct: 47 ASNSLEVEVQDDYGSGSSDFLGGGMTSVYFEGTNIVVRISGKNN-GSEGALLLNAHYDSV 105
Query: 64 LSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRD 123
+SPGA D GS VA MLE+ R SG P R +IFLFNGAEE +LGAHGF+ H W
Sbjct: 106 PTSPGASDDGSGVAVMLEVLRALAKSGEPPKRDVIFLFNGAEENGLLGAHGFITQHPWAK 165
Query: 124 SVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFP--VIPGDTDY 181
+V A IN+EA+G GG ++ Q+GP W Y ++A +P A AQDVF +IP DTD+
Sbjct: 166 NVRAFINLEAAGAGGRAILFQTGPGPWLVEAYYKAAPHPFATVLAQDVFQSGLIPSDTDF 225
Query: 182 RIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ 241
R+F +YG +PGLDI F+ GY YHT +DT D + PGS+Q G+NL +L+ +NS +L+
Sbjct: 226 RVFR-EYGGLPGLDIAFIENGYVYHTKYDTADHISPGSLQHMGENLLALLRYLANSDELE 284
Query: 242 NAHDRASFEATGIKNTDERAIFFDYLTWFMIYY 274
N + A++FD L F + Y
Sbjct: 285 NDSEYRG----------GDAVYFDLLGLFFVVY 307
|
Peptidase family M28; Endoplasmic reticulum metallopeptidase 1 (ERMP1; Felix-ina, FXNA or Fxna peptidase; KIAA1815) subfamily. ERMP1 is a multi-pass membrane protein located in the endoplasmic reticulum membrane. In humans, Fxna may play a crucial role in processing proteins required for the organization of somatic cells and oocytes into discrete follicular structures, although which proteins are hydrolyzed has not yet been determined. Another member of this cluster is the 24-kDa vacuolar protein (VP24) which is probably involved in the formation of intravacuolar pigmented globules (cyanoplasts) in highly anthocyanin-containing vacuoles; however, the biological function of the C-terminal region which includes the putative transmembrane metallopeptidase domain is unknown. Length = 307 |
| >gnl|CDD|218057 pfam04389, Peptidase_M28, Peptidase family M28 | Back alignment and domain information |
|---|
| >gnl|CDD|193493 cd02690, M28, M28 Zn-peptidases include aminopeptidases and carboxypeptidases | Back alignment and domain information |
|---|
| >gnl|CDD|225143 COG2234, Iap, Predicted aminopeptidases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|193563 cd08015, M28_like_4, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|193568 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane antigen | Back alignment and domain information |
|---|
| >gnl|CDD|193499 cd03877, M28_like_PA, M28 Zn-Peptidases containing a PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193496 cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Transferrin Receptor-like family | Back alignment and domain information |
|---|
| >gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 | Back alignment and domain information |
|---|
| >gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|193500 cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase | Back alignment and domain information |
|---|
| >gnl|CDD|193520 cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase (AAP)-like | Back alignment and domain information |
|---|
| >gnl|CDD|193519 cd05640, M28_like_1, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|193539 cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptidases containing a PA domain insert and associated with a PDZ domain | Back alignment and domain information |
|---|
| >gnl|CDD|193521 cd05643, M28_like_7, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|193537 cd05661, M28_like_PA_2, M28 Zn-Peptidases containing a PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like | Back alignment and domain information |
|---|
| >gnl|CDD|193504 cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| KOG2194 | 834 | consensus Aminopeptidases of the M20 family [Postt | 100.0 | |
| PF04389 | 179 | Peptidase_M28: Peptidase family M28; InterPro: IPR | 99.96 | |
| KOG2195 | 702 | consensus Transferrin receptor and related protein | 99.96 | |
| PRK10199 | 346 | alkaline phosphatase isozyme conversion aminopepti | 99.9 | |
| COG2234 | 435 | Iap Predicted aminopeptidases [General function pr | 99.78 | |
| PF09940 | 386 | DUF2172: Domain of unknown function (DUF2172); Int | 99.53 | |
| KOG3946 | 338 | consensus Glutaminyl cyclase [Posttranslational mo | 99.48 | |
| PF05450 | 234 | Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri | 99.29 | |
| COG4882 | 486 | Predicted aminopeptidase, Iap family [General func | 99.23 | |
| KOG2526 | 555 | consensus Predicted aminopeptidases - M20/M25/M40 | 99.08 | |
| TIGR03176 | 406 | AllC allantoate amidohydrolase. This enzyme cataly | 99.05 | |
| COG4310 | 435 | Uncharacterized protein conserved in bacteria with | 98.97 | |
| PF01546 | 189 | Peptidase_M20: Peptidase family M20/M25/M40 This f | 98.87 | |
| TIGR01879 | 401 | hydantase amidase, hydantoinase/carbamoylase famil | 98.86 | |
| PRK13590 | 591 | putative bifunctional OHCU decarboxylase/allantoat | 98.83 | |
| PRK09133 | 472 | hypothetical protein; Provisional | 98.82 | |
| PRK13799 | 591 | unknown domain/N-carbamoyl-L-amino acid hydrolase | 98.81 | |
| PRK12890 | 414 | allantoate amidohydrolase; Reviewed | 98.76 | |
| PRK12891 | 414 | allantoate amidohydrolase; Reviewed | 98.75 | |
| PRK06133 | 410 | glutamate carboxypeptidase; Reviewed | 98.73 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 98.72 | |
| PRK08596 | 421 | acetylornithine deacetylase; Validated | 98.7 | |
| PRK07473 | 376 | carboxypeptidase; Provisional | 98.63 | |
| PRK07906 | 426 | hypothetical protein; Provisional | 98.62 | |
| PRK13983 | 400 | diaminopimelate aminotransferase; Provisional | 98.62 | |
| PRK09290 | 413 | allantoate amidohydrolase; Reviewed | 98.6 | |
| PRK13013 | 427 | succinyl-diaminopimelate desuccinylase; Reviewed | 98.59 | |
| PRK12893 | 412 | allantoate amidohydrolase; Reviewed | 98.59 | |
| PRK12892 | 412 | allantoate amidohydrolase; Reviewed | 98.58 | |
| PRK07338 | 402 | hypothetical protein; Provisional | 98.58 | |
| PRK08588 | 377 | succinyl-diaminopimelate desuccinylase; Reviewed | 98.57 | |
| PRK09104 | 464 | hypothetical protein; Validated | 98.57 | |
| TIGR01883 | 361 | PepT-like peptidase T-like protein. This model rep | 98.55 | |
| PRK07907 | 449 | hypothetical protein; Provisional | 98.51 | |
| PRK06837 | 427 | acetylornithine deacetylase; Provisional | 98.5 | |
| PRK05469 | 408 | peptidase T; Provisional | 98.49 | |
| PRK13381 | 404 | peptidase T; Provisional | 98.48 | |
| TIGR01893 | 477 | aa-his-dipept aminoacyl-histidine dipeptidase. | 98.43 | |
| PRK08201 | 456 | hypothetical protein; Provisional | 98.43 | |
| PRK07079 | 469 | hypothetical protein; Provisional | 98.43 | |
| PRK08262 | 486 | hypothetical protein; Provisional | 98.42 | |
| PRK06915 | 422 | acetylornithine deacetylase; Validated | 98.4 | |
| PRK06446 | 436 | hypothetical protein; Provisional | 98.4 | |
| KOG2275 | 420 | consensus Aminoacylase ACY1 and related metalloexo | 98.39 | |
| TIGR01892 | 364 | AcOrn-deacetyl acetylornithine deacetylase (ArgE). | 98.36 | |
| PRK04443 | 348 | acetyl-lysine deacetylase; Provisional | 98.36 | |
| TIGR01882 | 410 | peptidase-T peptidase T. This model represents a t | 98.35 | |
| TIGR01880 | 400 | Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | 98.34 | |
| TIGR01886 | 466 | dipeptidase dipeptidase PepV. This model represent | 98.34 | |
| PRK07318 | 466 | dipeptidase PepV; Reviewed | 98.34 | |
| PRK13007 | 352 | succinyl-diaminopimelate desuccinylase; Reviewed | 98.33 | |
| PRK13009 | 375 | succinyl-diaminopimelate desuccinylase; Reviewed | 98.3 | |
| PRK06156 | 520 | hypothetical protein; Provisional | 98.28 | |
| PRK07205 | 444 | hypothetical protein; Provisional | 98.28 | |
| TIGR01900 | 373 | dapE-gram_pos succinyl-diaminopimelate desuccinyla | 98.27 | |
| PRK15026 | 485 | aminoacyl-histidine dipeptidase; Provisional | 98.26 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 98.23 | |
| PRK08651 | 394 | succinyl-diaminopimelate desuccinylase; Reviewed | 98.19 | |
| COG1363 | 355 | FrvX Cellulase M and related proteins [Carbohydrat | 98.17 | |
| PRK05111 | 383 | acetylornithine deacetylase; Provisional | 98.17 | |
| COG0624 | 409 | ArgE Acetylornithine deacetylase/Succinyl-diaminop | 98.16 | |
| PRK08554 | 438 | peptidase; Reviewed | 98.16 | |
| PRK13004 | 399 | peptidase; Reviewed | 98.16 | |
| PRK08652 | 347 | acetylornithine deacetylase; Provisional | 98.12 | |
| TIGR01891 | 363 | amidohydrolases amidohydrolase. This model represe | 98.12 | |
| PRK00466 | 346 | acetyl-lysine deacetylase; Validated | 98.09 | |
| TIGR01887 | 447 | dipeptidaselike dipeptidase, putative. This model | 98.09 | |
| TIGR01902 | 336 | dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d | 98.08 | |
| TIGR01246 | 370 | dapE_proteo succinyl-diaminopimelate desuccinylase | 98.0 | |
| KOG2657 | 596 | consensus Transmembrane glycoprotein nicastrin [Si | 97.89 | |
| TIGR03526 | 395 | selenium_YgeY putative selenium metabolism hydrola | 97.82 | |
| TIGR03320 | 395 | ygeY M20/DapE family protein YgeY. Members of this | 97.79 | |
| PF05343 | 292 | Peptidase_M42: M42 glutamyl aminopeptidase; InterP | 97.77 | |
| TIGR03107 | 350 | glu_aminopep glutamyl aminopeptidase. This model r | 97.69 | |
| PLN02693 | 437 | IAA-amino acid hydrolase | 97.67 | |
| PRK08737 | 364 | acetylornithine deacetylase; Provisional | 97.62 | |
| PLN02280 | 478 | IAA-amino acid hydrolase | 97.6 | |
| PRK09961 | 344 | exoaminopeptidase; Provisional | 97.29 | |
| COG4187 | 553 | RocB Arginine degradation protein (predicted deacy | 97.25 | |
| PRK09864 | 356 | putative peptidase; Provisional | 97.24 | |
| TIGR03106 | 343 | trio_M42_hydro hydrolase, peptidase M42 family. Th | 97.06 | |
| KOG2276 | 473 | consensus Metalloexopeptidases [Amino acid transpo | 95.91 | |
| PF04114 | 504 | Gaa1: Gaa1-like, GPI transamidase component ; Inte | 95.84 | |
| COG1473 | 392 | AbgB Metal-dependent amidase/aminoacylase/carboxyp | 89.64 | |
| PRK02813 | 428 | putative aminopeptidase 2; Provisional | 86.16 | |
| KOG3566 | 617 | consensus Glycosylphosphatidylinositol anchor atta | 80.34 |
| >KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-123 Score=1067.04 Aligned_cols=711 Identities=26% Similarity=0.443 Sum_probs=604.3
Q ss_pred ccceeEEEEEEEeeeeeEEeeeCCceEeeeeeeeeEEEEEeCCCCCCCCCeEEEeeeccCCCCCCCCCCchhHHHHHHHH
Q 003998 3 LVIAKIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLEL 82 (780)
Q Consensus 3 ~~~~~~ev~~q~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~G~~~~~~~~~Vll~aH~DS~~~spGA~Dn~sGvA~mLEl 82 (780)
+|.+++|+|.|..+|+|.. +.+++.|++++||++||.+++. ..+.+||++||+||++++|||+|||+|||+|||+
T Consensus 100 ~~~~~~Evd~q~~sg~~~~----~~~~~~Y~~i~NIvVki~~k~~-~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~ 174 (834)
T KOG2194|consen 100 SDLYDMEVDLQSASGSFIL----EGMTLVYQNISNIVVKISPKNG-NDKNALLLNAHFDSVPTGPGATDDGSGVASMLEA 174 (834)
T ss_pred cchhhheeceeeccceeee----hhhhheeeeeeeEEEecCCCCC-CccceeeeeccccccCCCCCCCcchhHHHHHHHH
Confidence 3468999999999999954 5788999999999999999874 3445999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHHhcCcccceeEEEEeccCCCCCcceEEecCCCCchhhHhhhhccCc
Q 003998 83 ARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYP 162 (780)
Q Consensus 83 aR~L~~~~~~p~r~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INlD~~G~gg~~~lf~~gp~~~l~~~y~~~~~~P 162 (780)
+|++++.....+|+|+|+||||||.+|+|||+|++||||+++++++||||++|+||++++||+||++|+++.|.++++||
T Consensus 175 lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGreiLFQagp~~wl~k~Y~~~~phP 254 (834)
T KOG2194|consen 175 LRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREILFQAGPNHWLLKAYLQAAPHP 254 (834)
T ss_pred HHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCcccceeEEecCCchHHHHHHHhhCCCc
Confidence 99999987778999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred cccccccccC--CCCCCCCchHHHhhcCCCCcEEEEEEecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCccc
Q 003998 163 MAHSAAQDVF--PVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKL 240 (780)
Q Consensus 163 ~~~~~~~~~f--~~ips~TD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l 240 (780)
+++++++|.| |.+||+|||++|. +|+|+||+|+|+..|++.|||++|.++++.|+++||+|+|+++++++++|+ ++
T Consensus 255 f~stlgee~Fq~g~IpSdTDfrif~-eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~q~tGen~L~~v~~lan~-el 332 (834)
T KOG2194|consen 255 FASTLGEELFQSGIIPSDTDFRIFR-EYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSLQHTGENILALVRSLANS-EL 332 (834)
T ss_pred hhhhhHHHhhhcCcCccccchHHHH-HhCCcccceeeeeeccceEEeecccccccCcchhhhhhhHHHHHHHHHhch-hh
Confidence 9999999999 8999999999996 589999999999999999999999999999999999999999999999998 56
Q ss_pred ccchhhhhhhhccCCCCCCCeeEcchhhhhhhhccHHHHHHHhhhhHHhhhccceEEEEecCccchhhhhHHHHHHHHHH
Q 003998 241 QNAHDRASFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSDFVKGMMI 320 (780)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~V~fd~lg~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (780)
.+..++ .++ .||||++|++++.|+++.+.+||.++.... +++..+.... + ++++...+.+
T Consensus 333 ~~~~~~----------~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~~~i------~l~~~~~g~~--~-~~~f~~~~~~ 392 (834)
T KOG2194|consen 333 DNSTER----------SKG-TVYFDVVGKYFLAYSESTGVILNITICISI------WLMSLRSGSS--Q-LGKFILACLL 392 (834)
T ss_pred cccccc----------CCC-ceehhhhhhhhheeehhhhhhhhhhhhhhh------hhhhhcccch--h-hhhHHHHHHH
Confidence 544333 245 899999999999999999999993332221 1221111111 2 7788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeeeechhhHHHHHHHHHHHHHHHHHHhhhccCCcchhhhhhhhcccccchh-hH
Q 003998 321 HATGKMLAIIFPIAFSVLRLLFSGYAMSWFAHPFLAFMMFIPCSLLGLLIPRSLWSHFPLSQDAMLLKTSKEALSDE-AR 399 (780)
Q Consensus 321 ~~~~~~~~~~~~~~~a~~~~~~~~~~m~w~s~~~l~~~ly~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 399 (780)
+++++++++++++++|++++.+ +.+|+||++||+++++|.||+++|+.+++.+|.+..| +.+.+..++ +.
T Consensus 393 ~i~s~~~~~~l~~~~a~~l~~v-~l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~--------~~~~~~~~~~ql 463 (834)
T KOG2194|consen 393 QILSIVVAIGLPVLVALFLDWV-GLPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSK--------RHSLEYLQHDQL 463 (834)
T ss_pred HHHHHHHHHhhHHHHHHHhhcc-cccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhcc--------ccccchhhHHHH
Confidence 9999999999999999988876 7799999999999999999999999999998766544 333333333 44
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHhhHHHHHHHHhhccccCCcchhhhHHhhhhHHHHHHHHHHHHHHHHhh
Q 003998 400 FWGAFGFYAMLTMAYLVAGLTGGFLTFIVATSMLPAWIFFCISINFYGRRSLRSTLFYVVPLIPCITYSVYFGGFVVQFL 479 (780)
Q Consensus 400 ~~~~~~~~~~l~~~~~~~gi~say~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~f 479 (780)
+++. +++.|++++|++||||+|++++++++++++++++ +..+++.++..+ ..++++||++|+.+.+|.++.++.+|
T Consensus 464 ~~h~--~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~~~~~-~~~~l~~~~~~~-~~~~~i~~~~p~~~~ay~~~~~~~~f 539 (834)
T KOG2194|consen 464 LLHS--LLSILLIIMTYYGIRSAYLPLLLLLFYVISYLLN-TLTILHLCGTLY-LITLLICQVGPFLFAAYSTYSLVRTF 539 (834)
T ss_pred HHHH--HHHHHHHHheecccchhHHHHHHHHHHHHHHHHh-hceeeccCCcee-eeeeeeeehHhHHHHHHHHHHHHHee
Confidence 4443 7889999999999999999999999999999854 556666555444 44899999999999999999999999
Q ss_pred hcccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhchhHHHHhhhhhhHHHHHHHHHHH--HHhhhcCCCCcCC-CCCc
Q 003998 480 IEKMGMMGAFPSPYGYYVQDIVVAAAVGAVTGWCVGPLLPICGLWLARSSVLQFLLHLTV--LALALSSQFFPYS-TGAH 556 (780)
Q Consensus 480 vp~~Gr~G~~~~p~~~~~pd~~ia~~~~~~~~l~~~~l~Pli~~~~~~~~i~~~l~~~~~--~~~~~~~~~FPY~-~~~p 556 (780)
|||+||.|.+.| ||++||.++++.+.++++|++|+++++++++.++.++++++. +.+++|+.+|||+ ++++
T Consensus 540 ipm~Gr~g~~~n------Pd~~i~~~~~~~~~l~~~f~i~l~~~fr~~~~i~~~l~~I~~~~~~i~~T~~~fPy~~~~~~ 613 (834)
T KOG2194|consen 540 IPMMGRFGNASN------PDLSISFLNAFGANLIVGFLIPLVHLFRRSKSIILGLFGITAVILIIASTSIGFPYRPKTTV 613 (834)
T ss_pred eccccccCCCCC------chHHHHHHHHHHHHhhHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHhcCCcCCccccccc
Confidence 999999999999 899999999999999999999999976555566665655543 3446799999999 7889
Q ss_pred ceEEEEEEEEe---cCCCc-eeecccceeecCCCcccccccccchhhccccCCCCcccccccccccccceeeccccc---
Q 003998 557 KRLVFQHTFVT---ADANQ-IVESSFDFSVVDSNSFLFLFKFAPEVAKELHIGPEFSLEAANVSQRETWMVLFPVSF--- 629 (780)
Q Consensus 557 kR~~~~H~~~~---~~g~~-~~~sg~~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~--- 629 (780)
||+.++|+.|+ ++|++ +.|||||++.+|||+.+.+...... ..+... ..|.|+.++ +|+.|+++
T Consensus 614 ~r~~~lH~~rtf~~~~~~~~~~ds~~~i~~~D~r~~~~~~~~~~~------~~~~~~--~~~~~~~~~-~c~~p~y~w~~ 684 (834)
T KOG2194|consen 614 QRVPVLHVRRTFYDRDGTSSQNDSGYFINSQDRRGAEVLPFTKSN------LTDLSS--VQADCDDEM-MCGMPVYNWIK 684 (834)
T ss_pred eeEEEEecccceecccCceeecccceeeeecccccccCCcchhhc------cccccc--ccccccccc-cCCceeeeccc
Confidence 99999997555 77877 7899999999999987654332221 112222 234456667 67777664
Q ss_pred cccCceeccCCCCCcccccCCcceee-cCcCcccCCCCceEEEEEEEeCCcceEEEEeecCCeeeeeccccCCCCCCCcc
Q 003998 630 LFSKSLKFPATSDEISKQYEYFPYLS-TSKPHTTSGDGSRRVYLELSLGSLEEVWVAVLNITGPLSNWSFADNKVPVPEI 708 (780)
Q Consensus 630 ~~~~s~wlP~~~~~~~~~~~~~~~L~-~~k~~~~~~~~~rr~~f~l~~p~~m~~~~~p~~~~~~l~~WSf~~~~~p~~~~ 708 (780)
.+..++|+|.++|...+ ..|.++ ++|+++ ++++.|++|++++++||++|++|+++ +++.+|||.++++..
T Consensus 685 ~~~~~~~vp~~~~v~~~---~~~~l~l~sk~~~--~~~~~r~~~~i~~~d~~s~~i~p~~d-~~~~~wsf~~~~~~~--- 755 (834)
T KOG2194|consen 685 PREQSLWVPNPEPVIGP---YPPNLKLLSKTSL--DNGNLRYEFSITGTDHISLFISPLND-VKVLDWSFTTSPLTE--- 755 (834)
T ss_pred cCccceEecCCccccCC---CCceEEEeecccc--CCCceEEEEEEeccCceEEEEEecCC-ceEEEEeccCCcccc---
Confidence 56678999998766544 457777 689888 67899999999999999999999995 899999998775322
Q ss_pred cCCCCCeEEEEEecCCCCceEEEEEecCC----CceEEEEEEEeeee------cHHHHHHHhcCCCCeeecccccccccc
Q 003998 709 VDGGPPSYICRLSGSSHENWTFWLEASSP----ENLRVEVAVLDQVL------VDEAKKLKGLFPDWTDVTAYSSFRSSY 778 (780)
Q Consensus 709 ~~~~~~~~i~~~~G~~~~pw~Fwle~~~~----~~~~~~l~v~~h~~------~~e~~~fl~~fP~wa~~~~w~a~~~~y 778 (780)
..++||+++++|.++.|++||+|+++. +.+ +++++.+||. +++.++|+++|||||++++|++.|.+|
T Consensus 756 --~~~~~~i~~~yg~~~~p~~F~lel~~~~~~~~v~-~k~~~~~h~~~~~~~~t~~~~~~~~~lP~~~~~~~~~~~~~~~ 832 (834)
T KOG2194|consen 756 --NKTPYHIYFSYGLDSTPLNFWLELEKEEGVTDVP-FKLGVSAHYIHDLELITPEYKEFLETLPSWAATVDWSTSYESW 832 (834)
T ss_pred --cCCceEEEEEeecCCCCceEEEEEeeccCccCCc-eEEeeeeeeccchhhcCHHHHHHHHhCCchhhccccccchhhe
Confidence 334899999999999999999999864 445 9999999995 899999999999999999999999999
Q ss_pred cC
Q 003998 779 TF 780 (780)
Q Consensus 779 ~f 780 (780)
+|
T Consensus 833 ~~ 834 (834)
T KOG2194|consen 833 IF 834 (834)
T ss_pred eC
Confidence 86
|
|
| >PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
| >PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG2234 Iap Predicted aminopeptidases [General function prediction only] | Back alignment and domain information |
|---|
| >PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis | Back alignment and domain information |
|---|
| >KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch | Back alignment and domain information |
|---|
| >COG4882 Predicted aminopeptidase, Iap family [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03176 AllC allantoate amidohydrolase | Back alignment and domain information |
|---|
| >COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >TIGR01879 hydantase amidase, hydantoinase/carbamoylase family | Back alignment and domain information |
|---|
| >PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK09133 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional | Back alignment and domain information |
|---|
| >PRK12890 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK12891 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK06133 glutamate carboxypeptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >PRK08596 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK07473 carboxypeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK07906 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13983 diaminopimelate aminotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK09290 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK12893 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK12892 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK07338 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK09104 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR01883 PepT-like peptidase T-like protein | Back alignment and domain information |
|---|
| >PRK07907 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK05469 peptidase T; Provisional | Back alignment and domain information |
|---|
| >PRK13381 peptidase T; Provisional | Back alignment and domain information |
|---|
| >TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase | Back alignment and domain information |
|---|
| >PRK08201 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07079 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK06446 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) | Back alignment and domain information |
|---|
| >PRK04443 acetyl-lysine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01882 peptidase-T peptidase T | Back alignment and domain information |
|---|
| >TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | Back alignment and domain information |
|---|
| >TIGR01886 dipeptidase dipeptidase PepV | Back alignment and domain information |
|---|
| >PRK07318 dipeptidase PepV; Reviewed | Back alignment and domain information |
|---|
| >PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK06156 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07205 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >PRK15026 aminoacyl-histidine dipeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05111 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08554 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK13004 peptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK08652 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01891 amidohydrolases amidohydrolase | Back alignment and domain information |
|---|
| >PRK00466 acetyl-lysine deacetylase; Validated | Back alignment and domain information |
|---|
| >TIGR01887 dipeptidaselike dipeptidase, putative | Back alignment and domain information |
|---|
| >TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase | Back alignment and domain information |
|---|
| >TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade | Back alignment and domain information |
|---|
| >KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03526 selenium_YgeY putative selenium metabolism hydrolase | Back alignment and domain information |
|---|
| >TIGR03320 ygeY M20/DapE family protein YgeY | Back alignment and domain information |
|---|
| >PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >TIGR03107 glu_aminopep glutamyl aminopeptidase | Back alignment and domain information |
|---|
| >PLN02693 IAA-amino acid hydrolase | Back alignment and domain information |
|---|
| >PRK08737 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PLN02280 IAA-amino acid hydrolase | Back alignment and domain information |
|---|
| >PRK09961 exoaminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09864 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family | Back alignment and domain information |
|---|
| >KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins | Back alignment and domain information |
|---|
| >COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK02813 putative aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 780 | ||||
| 3b3t_A | 291 | Crystal Structure Of The D118n Mutant Of The Aminop | 2e-05 | ||
| 1igb_A | 291 | Aeromonas Proteolytica Aminopeptidase Complexed Wit | 3e-05 | ||
| 3b35_A | 291 | Crystal Structure Of The M180a Mutant Of The Aminop | 3e-05 | ||
| 3b3v_A | 291 | Crystal Structure Of The S228a Mutant Of The Aminop | 3e-05 | ||
| 1cp6_A | 291 | 1-Butaneboronic Acid Binding To Aeromonas Proteolyt | 3e-05 | ||
| 1rtq_A | 299 | The 0.95 Angstrom Resolution Crystal Structure Of T | 3e-05 | ||
| 2anp_A | 291 | Functional Glutamate 151 To Histidine Mutant Of The | 1e-04 |
| >pdb|3B3T|A Chain A, Crystal Structure Of The D118n Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
|
| >pdb|1IGB|A Chain A, Aeromonas Proteolytica Aminopeptidase Complexed With The Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate Length = 291 | Back alignment and structure |
| >pdb|3B35|A Chain A, Crystal Structure Of The M180a Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
| >pdb|3B3V|A Chain A, Crystal Structure Of The S228a Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
| >pdb|1CP6|A Chain A, 1-Butaneboronic Acid Binding To Aeromonas Proteolytica Aminopeptidase Length = 291 | Back alignment and structure |
| >pdb|1RTQ|A Chain A, The 0.95 Angstrom Resolution Crystal Structure Of The Aminopeptidase From Aeromonas Proteolytica Length = 299 | Back alignment and structure |
| >pdb|2ANP|A Chain A, Functional Glutamate 151 To Histidine Mutant Of The Aminopeptidase From Aeromonas Proteolytica Length = 291 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Length = 314 | Back alignment and structure |
|---|
Score = 87.9 bits (217), Expect = 5e-19
Identities = 39/236 (16%), Positives = 72/236 (30%), Gaps = 42/236 (17%)
Query: 32 YRNHTNIVMRISSTDSQDTDPSVLMNGHFD-------------GPLSSPGAGDCGSCVAS 78
NI+ + +L H+D G D S V
Sbjct: 81 ILKSRNIIGAY---KPESKKRILLC-AHWDSRPYADNDPDPKNHHTPILGVNDGASGVGV 136
Query: 79 MLELARLTIDSGWIPPRPIIFLFNGAEELFM--------------LGAHGFMK-AHKWRD 123
+LE+AR P I +F +E+ + LG+ + + H
Sbjct: 137 LLEIARQI--QKEQPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNY 194
Query: 124 SVGAVINVEASGTGGLDLVCQSGP-SSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYR 182
+ I ++ G + + S + V D
Sbjct: 195 NARYGILLDMVGGKDATFYYEGYSARTARSEMKKIWKKAHELGYGKYFVKEDGGETVDDH 254
Query: 183 IFSQDYGDIPGLDIIFLIGGY-------YYHTSHDTVDRLLPGSVQARGDNLFNVL 231
I+ IP +DII G ++HT +DT++ + +++A G + +V+
Sbjct: 255 IYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVI 310
|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Length = 421 | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Length = 309 | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Length = 299 | Back alignment and structure |
|---|
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Length = 640 | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Length = 284 | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Length = 444 | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Length = 330 | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Length = 329 | Back alignment and structure |
|---|
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Length = 707 | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 | Back alignment and structure |
|---|
| >3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Length = 490 | Back alignment and structure |
|---|
| >2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Length = 487 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| 3kas_A | 640 | Transferrin receptor protein 1; transferrin recept | 100.0 | |
| 3fed_A | 707 | Glutamate carboxypeptidase III; metallopeptidase, | 100.0 | |
| 4f9u_A | 312 | CG32412; alpha/beta hydrolase, PGlu formation, PE, | 99.97 | |
| 4fuu_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase li | 99.97 | |
| 4fai_A | 330 | CG5976, isoform B; alpha/beta hydrolase, PGlu form | 99.97 | |
| 3iib_A | 444 | Peptidase M28; YP_926796.1, structural genomics, J | 99.96 | |
| 3pb6_X | 330 | Glutaminyl-peptide cyclotransferase-like protein; | 99.95 | |
| 3tc8_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase-li | 99.95 | |
| 3gux_A | 314 | Putative Zn-dependent exopeptidase; aminopeptidase | 99.95 | |
| 2ek8_A | 421 | Aminopeptidase; metalloproteinase, hydrolase; 1.80 | 99.95 | |
| 1tkj_A | 284 | Aminopeptidase, SGAP; double-zinc metalloproteinas | 99.94 | |
| 2afw_A | 329 | Glutaminyl-peptide cyclotransferase; alpha-beta pr | 99.94 | |
| 1rtq_A | 299 | Bacterial leucyl aminopeptidase; bimetallic, zinc, | 99.93 | |
| 3k9t_A | 435 | Putative peptidase; structural genomics, joint cen | 99.89 | |
| 4h2k_A | 269 | Succinyl-diaminopimelate desuccinylase; DAPE, MCSG | 99.47 | |
| 3t68_A | 268 | Succinyl-diaminopimelate desuccinylase; DAPE, csgi | 99.46 | |
| 1vhe_A | 373 | Aminopeptidase/glucanase homolog; structural genom | 99.24 | |
| 2wyr_A | 332 | Cobalt-activated peptidase TET1; hydrolase, large | 99.24 | |
| 1y0y_A | 353 | FRV operon protein FRVX; aminopeptidase, PDZ, hydr | 99.2 | |
| 2gre_A | 349 | Deblocking aminopeptidase; structural genomi prote | 99.15 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 99.15 | |
| 2fvg_A | 340 | Endoglucanase; TM1049, structural genomics, joint | 99.08 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 98.91 | |
| 3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putati | 98.86 | |
| 1cg2_A | 393 | Carboxypeptidase G2; metallocarboxypeptidase, hydr | 98.85 | |
| 3dlj_A | 485 | Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti | 98.81 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 98.81 | |
| 3n5f_A | 408 | L-carbamoylase, N-carbamoyl-L-amino acid hydrolase | 98.8 | |
| 3pfo_A | 433 | Putative acetylornithine deacetylase; metal bindin | 98.8 | |
| 3tx8_A | 369 | Succinyl-diaminopimelate desuccinylase; peptidase, | 98.66 | |
| 3ife_A | 434 | Peptidase T; metallopeptidase, aminopeptidase, hyd | 98.65 | |
| 3gb0_A | 373 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 98.6 | |
| 2rb7_A | 364 | Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat | 98.59 | |
| 2v8h_A | 474 | Beta-alanine synthase; amidohydrolase, alpha and b | 98.57 | |
| 3pfe_A | 472 | Succinyl-diaminopimelate desuccinylase; metal bind | 98.55 | |
| 1vgy_A | 393 | Succinyl-diaminopimelate desuccinylase; structural | 98.55 | |
| 1z2l_A | 423 | Allantoate amidohydrolase; ALLC, purine cataboli a | 98.55 | |
| 1vho_A | 346 | Endoglucanase; structural genomics, unknown functi | 98.52 | |
| 1ylo_A | 348 | Hypothetical protein SF2450; structural genomics, | 98.52 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 98.52 | |
| 3rza_A | 396 | Tripeptidase; phosphorylase/hydrolase-like, struct | 98.5 | |
| 1fno_A | 417 | Peptidase T; metallo peptidase, protease, hydrolas | 98.44 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 98.43 | |
| 3isz_A | 377 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 98.42 | |
| 3mru_A | 490 | Aminoacyl-histidine dipeptidase; metalloprotease, | 98.37 | |
| 2f7v_A | 369 | Aectylcitrulline deacetylase; alpha/beta, hydrolas | 98.36 | |
| 1xmb_A | 418 | IAA-amino acid hydrolase homolog 2; structural gen | 98.36 | |
| 3cpx_A | 321 | Aminopeptidase, M42 family; YP_676701.1, putative | 98.3 | |
| 1ysj_A | 404 | Protein YXEP; M20 family peptidase, dinuclear meta | 98.25 | |
| 2qyv_A | 487 | XAA-His dipeptidase; YP_718209.1, structural genom | 98.23 | |
| 3kl9_A | 355 | PEPA, glutamyl aminopeptidase; tetrahedral aminope | 98.14 | |
| 3ram_A | 394 | HMRA protein; two-domain, catalytic (alpha-beta-al | 98.09 | |
| 3io1_A | 445 | Aminobenzoyl-glutamate utilization protein; peptid | 98.0 | |
| 2vpu_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 96.76 | |
| 2wzn_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 96.11 | |
| 3isx_A | 343 | Endoglucanase; TM1050, structural genomics, joint | 95.86 | |
| 2ijz_A | 428 | Probable M18-family aminopeptidase 2; putative ami | 84.36 |
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=345.84 Aligned_cols=277 Identities=20% Similarity=0.184 Sum_probs=215.9
Q ss_pred eeeeeeeeEEEEEeCCCCCCCCCeEEEeeeccCCCCCCCCCCchhHHHHHHHHHHHHHh----cCCCCCCCEEEEEeCcc
Q 003998 30 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID----SGWIPPRPIIFLFNGAE 105 (780)
Q Consensus 30 ~~y~~~~NVi~~i~G~~~~~~~~~Vll~aH~DS~~~spGA~Dn~sGvA~mLElaR~L~~----~~~~p~r~IiFlf~~aE 105 (780)
....++.||||+++|++ +++++|+++||+|||. +||.||++|||+|||+||.|++ .|++|+|+|+|++|+||
T Consensus 261 ~~~~~~~NVi~~i~G~~--~~~~~vvvgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~E 336 (640)
T 3kas_A 261 LKEIKILNIFGVIKGFV--EPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAG 336 (640)
T ss_dssp EEEEEEEEEEEEECCSS--EEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSG
T ss_pred EEeeeEEEEEEEEeCCc--CCCCceeeecccCCCC--CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCc
Confidence 35678999999999974 3578999999999995 9999999999999999999985 37899999999999999
Q ss_pred cCCccchHHHHHhc--CcccceeEEEEeccCCCCCcceEEecCCC-CchhhHhhhhccCcccc-ccccc-cC----CCCC
Q 003998 106 ELFMLGAHGFMKAH--KWRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAH-SAAQD-VF----PVIP 176 (780)
Q Consensus 106 E~gl~GS~~fv~~h--~~~~~i~a~INlD~~G~gg~~~lf~~gp~-~~l~~~y~~~~~~P~~~-~~~~~-~f----~~ip 176 (780)
|.|++||++|+++| ++.++++++||+|++|.|++.+.++++|. .++++.+.+.+++|.+. ++.++ .+ +.++
T Consensus 337 E~gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~ 416 (640)
T 3kas_A 337 DFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLT 416 (640)
T ss_dssp GGTSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCC
T ss_pred ccCchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCC
Confidence 99999999999998 34589999999999999888888888875 34555566778888753 34432 22 5678
Q ss_pred CCCchHHHhhcCCCCcEEEEEEecC-CC-CCCCcCCCcCCCCH------HHHHHHHHHHHHHHHHHhcCcccc-cchhh-
Q 003998 177 GDTDYRIFSQDYGDIPGLDIIFLIG-GY-YYHTSHDTVDRLLP------GSVQARGDNLFNVLKAFSNSSKLQ-NAHDR- 246 (780)
Q Consensus 177 s~TD~~~F~~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~id~------~~lq~~g~~~l~l~~~la~a~~l~-~~~~~- 246 (780)
++|||.+|.+ ++||||+++++..+ .| +|||.+||+++++. ...+.+++.+..++.+|++++.++ +..++
T Consensus 417 ~~sD~~~F~~-~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~ 495 (640)
T 3kas_A 417 LDNAAFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYN 495 (640)
T ss_dssp TTSTHHHHHH-HHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHH
T ss_pred CCcchHHHHH-hCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 9999999975 68999999999876 45 59999999998753 356667888888999999877665 32222
Q ss_pred -------hhhhhccCCCCCCCeeEcchhhhhhhhccHHHHHHHhhhhHHhhhccceEEEEecCccchhhhhHHH
Q 003998 247 -------ASFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSD 313 (780)
Q Consensus 247 -------~~~~~~~~~~~~~~~V~fd~lg~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (780)
.+++. .........+.|+.|..++..|... |.-++..+.......+..+|++|+|+|.+||.|+.
T Consensus 496 ~~l~~~~~~l~~-~~~~~~~~~~~~~~l~~a~~~f~~a-a~~~~~~~~~~~~~~~~~~r~~N~~l~~~er~fl~ 567 (640)
T 3kas_A 496 SQLLSFVRDLNQ-YRADIKEMGLSLQWLYSARGDFFRA-TSRLTTDFGNAEKTDRFVMKKLNDRVMRVEYHFLS 567 (640)
T ss_dssp HHHHHHHHHHGG-GTTTTTTTTCCCHHHHHHHHHHHHH-HHHHHHHHHHSCTTCHHHHHHHHHHHHHHGGGGBC
T ss_pred HHHHHHHHHHHH-HHHhhhccCCChHHHHHHHHHHHHH-HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhcC
Confidence 12222 2233344578999999999999884 55565444333333445677889999999986553
|
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... | Back alignment and structure |
|---|
| >4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* | Back alignment and structure |
|---|
| >4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... | Back alignment and structure |
|---|
| >3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
| >4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A | Back alignment and structure |
|---|
| >1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A | Back alignment and structure |
|---|
| >2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} | Back alignment and structure |
|---|
| >3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
|---|
| >2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A | Back alignment and structure |
|---|
| >3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A | Back alignment and structure |
|---|
| >1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A | Back alignment and structure |
|---|
| >3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} | Back alignment and structure |
|---|
| >2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A | Back alignment and structure |
|---|
| >1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A | Back alignment and structure |
|---|
| >3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
| >3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A | Back alignment and structure |
|---|
| >3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} | Back alignment and structure |
|---|
| >2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 780 | ||||
| d2afwa1 | 329 | c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransf | 7e-22 | |
| d1de4c3 | 294 | c.56.5.5 (C:122-189,C:383-608) Transferrin recepto | 1e-21 | |
| d3bi1a3 | 304 | c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypep | 5e-18 | |
| d1rtqa_ | 291 | c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolyti | 8e-18 | |
| d1fnoa4 | 295 | c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripepti | 4e-14 | |
| d1cg2a1 | 276 | c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, | 1e-11 | |
| d1tkja1 | 277 | c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces gr | 3e-10 | |
| g1q7l.1 | 280 | c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain | 5e-07 | |
| d1vhea2 | 275 | c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y | 3e-06 | |
| d2grea2 | 233 | c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid | 1e-05 | |
| d1lfwa1 | 272 | c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV { | 2e-05 | |
| d2fvga2 | 255 | c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { | 2e-05 | |
| d1y0ya2 | 255 | c.56.5.4 (A:164-351,A:6-72) Frv operon protein Frv | 3e-04 |
| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: Glutaminyl-peptide cyclotransferase-like domain: Glutaminyl-peptide cyclotransferase, QPCT species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.3 bits (236), Expect = 7e-22
Identities = 36/243 (14%), Positives = 66/243 (27%), Gaps = 49/243 (20%)
Query: 26 HSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------PGAGDCGSCVAS 78
GYR+ +NI+ ++ +++ H+D S GA D A
Sbjct: 79 SQTPYGYRSFSNIISTLNP----TAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAM 134
Query: 79 MLELAR--------LTIDSGWIPPRPIIFLFNGAEEL--------FMLGAHGFMKAHKWR 122
MLELAR L S P + +F EE + G+
Sbjct: 135 MLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMAST 194
Query: 123 ------------DSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQ--SAIYPMAHSAA 168
+ ++ ++ G S+ ++ +
Sbjct: 195 PHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKD 254
Query: 169 QDVF--PVIPGDTDYRIFSQDYG-----DIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQ 221
+ I D+ +P L +I +HT D + L ++
Sbjct: 255 HSLEGRYFQNYSYGGVIQD-DHIPFLRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTID 313
Query: 222 ARG 224
Sbjct: 314 NLN 316
|
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Length = 291 | Back information, alignment and structure |
|---|
| >d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Length = 295 | Back information, alignment and structure |
|---|
| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Length = 277 | Back information, alignment and structure |
|---|
| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 | Back information, alignment and structure |
|---|
| >d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 272 | Back information, alignment and structure |
|---|
| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 | Back information, alignment and structure |
|---|
| >d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 255 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| d1de4c3 | 294 | Transferrin receptor ectodomain, protease-like dom | 100.0 | |
| d2afwa1 | 329 | Glutaminyl-peptide cyclotransferase, QPCT {Human ( | 99.97 | |
| d1tkja1 | 277 | Aminopeptidase {Streptomyces griseus [TaxId: 1911] | 99.97 | |
| d3bi1a3 | 304 | Glutamate carboxypeptidase II FOLH1 {Human (Homo s | 99.97 | |
| d1rtqa_ | 291 | Aminopeptidase {Aeromonas proteolytica [TaxId: 671 | 99.97 | |
| d1vhoa2 | 248 | Putative endoglucanase TM1048, catalytic domain {T | 99.62 | |
| d1yloa2 | 264 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 99.6 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 99.55 | |
| g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapi | 99.49 | |
| d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacil | 99.39 | |
| d2fvga2 | 255 | Endoglucanase TM1049 {Thermotoga maritima [TaxId: | 99.39 | |
| d1fnoa4 | 295 | Peptidase T (tripeptidase), catalytic domain {Salm | 99.29 | |
| d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 99.24 | |
| d1z2la1 | 293 | Allantoate amidohydrolase AllC catalytic domain {E | 99.23 | |
| d1r3na1 | 322 | Peptidase-like beta-alanine synthase, catalytic do | 99.03 | |
| d1lfwa1 | 272 | Aminopeptidase PepV {Lactobacillus delbrueckii [Ta | 98.77 | |
| d1vgya1 | 262 | Succinyl-diaminopimelate desuccinylase, catalytic | 98.6 | |
| d1y0ya2 | 255 | Frv operon protein FrvX, catalytic domain {Pyrococ | 98.21 | |
| d1ysja1 | 261 | Protein YxeP {Bacillus subtilis [TaxId: 1423]} | 97.59 | |
| d1xmba1 | 273 | IAA-amino acid hydrolase, catalytic domain {Mouse- | 96.6 | |
| d1y7ea2 | 322 | Probable aminopeptidase ApeA {Borrelia burgdorferi | 84.81 |
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: FolH catalytic domain-like domain: Transferrin receptor ectodomain, protease-like domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-33 Score=298.06 Aligned_cols=205 Identities=21% Similarity=0.208 Sum_probs=162.8
Q ss_pred eeeeeeeEEEEEeCCCCCCCCCeEEEeeeccCCCCCCCCCCchhHHHHHHHHHHHHHh----cCCCCCCCEEEEEeCccc
Q 003998 31 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID----SGWIPPRPIIFLFNGAEE 106 (780)
Q Consensus 31 ~y~~~~NVi~~i~G~~~~~~~~~Vll~aH~DS~~~spGA~Dn~sGvA~mLElaR~L~~----~~~~p~r~IiFlf~~aEE 106 (780)
...+..||||+|+|+. +++++|+++||||||. +||+||+||||+|||+||+|++ .|++|+|+|+|++|+|||
T Consensus 68 ~~~~~~Nvig~i~G~~--~~~~~ivigaH~Ds~~--~GA~DnasG~a~llelar~l~~~~~~~g~~P~rtI~f~~~~~EE 143 (294)
T d1de4c3 68 KEIKILNIFGVIKGFV--EPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGD 143 (294)
T ss_dssp EEEEEEEEEEEECCSS--EEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEECCCT
T ss_pred cCCccceEEEEEeCCC--CCCceEEEEeeccccc--ccccCCchhHHHHHHHHHHHHhhhhhcCCCCCceEEEEEecCcc
Confidence 3456789999999985 4788999999999996 9999999999999999999964 589999999999999999
Q ss_pred CCccchHHHHHhcCc--ccceeEEEEeccCCCCCcceEEecCCC-CchhhHhhhhccCcccccccccc------CCCCCC
Q 003998 107 LFMLGAHGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDV------FPVIPG 177 (780)
Q Consensus 107 ~gl~GS~~fv~~h~~--~~~i~a~INlD~~G~gg~~~lf~~gp~-~~l~~~y~~~~~~P~~~~~~~~~------f~~ips 177 (780)
.|+.||++|+++|+. .+++.++||+|+.+.|+..+.+++.|. ..+.+...+.+++|.......+. ....+.
T Consensus 144 ~Gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~g~~~~~~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 223 (294)
T d1de4c3 144 FGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTL 223 (294)
T ss_dssp TTSHHHHHHHHHSHHHHTTTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHHHSBCTTTCSBSCCCTTGGGGCCCCCT
T ss_pred ccccCHHHHHHhChhhhccceEEEEecccCcCCCCCCceecChhHHHHHHHHHHhcCCccccceeeeccCccccccCCCC
Confidence 999999999999854 578999999999998888877777663 12222233445666544322111 034568
Q ss_pred CCchHHHhhcCCCCcEEEEEEecCCC--CCCCcCCCcCCCC----H--HHHHHHHHHHHHHHHHHhcCccc
Q 003998 178 DTDYRIFSQDYGDIPGLDIIFLIGGY--YYHTSHDTVDRLL----P--GSVQARGDNLFNVLKAFSNSSKL 240 (780)
Q Consensus 178 ~TD~~~F~~~~~GIPgld~a~~~~~~--~YHT~~Dt~d~id----~--~~lq~~g~~~l~l~~~la~a~~l 240 (780)
++||.+|.+ ++|||++++.+..+.. .|||.+||+++++ + ...+.+++.+..++.+||+.+.|
T Consensus 224 ~sD~~pF~~-~~GIP~i~~~~~~~~~~~~yHt~~DT~~~l~~~~~~~~~~~~a~A~v~~~l~~~LAn~~~l 293 (294)
T d1de4c3 224 DNAAFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVEL 293 (294)
T ss_dssp TSTHHHHHH-TTCCCEEEEEEECSSCCTTTTSTTCSHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred CCCchhHHH-hCCCeeEEeeccCCCCCCCCCCccccHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 899999975 5899999999877643 7899999999873 2 24555778888899999987654
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| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} | Back information, alignment and structure |
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| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} | Back information, alignment and structure |
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| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
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| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
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| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
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| >d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} | Back information, alignment and structure |
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| >d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
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| >d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} | Back information, alignment and structure |
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