Citrus Sinensis ID: 004007

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------78

MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV

ccccccccccccccHHHHHHHHHHHHHccEEEccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEEEEcccccccHHHHHHHHHcccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccEEEEHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEEcHHHHHHHcHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

ccHHHcccccccccccHHHHHHHHHHHccEEEcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEcccccccccEEHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEHHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc

MDRETGVYQNLVKKESWRTVLTLAYQSLGvvygdlstsplyvykstfaedikhsetneEIFGALSFIFWTLTLVPLLKYVFIVLRaddngeggTFALYSLLCRHArvnslpngqlaDEELSEYKkdvsslgpkssfgskLKSTLESYRVLQRFLLVLTLIGTcmvigdgvltpALSVFSAVSGlelstakehhkyvEVPVACIILIGLFALqhygthrvgfLFAPVVLIWLLCISAIGlynifhwnphvyqalspcymykfvkktqkggwmslgGILLCITgseamfadlghfsqLSIKIAFTSLVYPSLILAYMGQAAYlsqhhvldndyrigfyvsvpeklrwPVLVIAILAAVVGSQAIITGTFSIIKQcsalgcfprvkivhtsskihgqiyipeINWILMILCLAVTIgfrdtkrmgnASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLslgpslgivRVRGIGLIHtelvsgipaifSHFVTNLPAFHQVLVFLCIksvpvphvrpeerflvghigprqYRIYRCIVRygyrdvhkddmEFEKDLVCSIAEFIRsgsvginganedpykdddkmtvvgtcsshtegiqmseddvivnidspgtselreiqsptvikpkkrvrfvvpespkiDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEflrrntrvpsyalsvphastlevgmiyhv

mdretgvyqnlvkkeswrTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKkdvsslgpkssfgskLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEErflvghigprqyriYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFirsgsvginganedpykdddKMTVVGTCSShtegiqmseddVIVNIDSpgtselreiqsptvikpkkrvrfvvpespkidREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRrntrvpsyalsvphastlevgMIYHV

MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPvlviailaavvGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVffaicfvfffGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV

******VYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVN**********************************TLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVG*************************************************************************************AREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIY**

********************LTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHA**************************************LESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFI*********************T***************************************************************LQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV

MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL********************KSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV

**************ESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGI**********************************************************KRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		779	2.2.26 [Sep-21-2011]
Q8W4I4		782	Potassium transporter 6 O	yes	no	0.998	0.994	0.800	0.0
Q9M7J9		781	Potassium transporter 8 O	no	no	0.992	0.989	0.754	0.0
Q6YWQ4		770	Potassium transporter 25	yes	no	0.960	0.971	0.729	0.0
Q67VS5		843	Potassium transporter 10	no	no	0.984	0.909	0.696	0.0
Q5Z6K9		772	Potassium transporter 24	no	no	0.961	0.970	0.691	0.0
Q7XIV8		788	Probable potassium transp	no	no	0.992	0.980	0.645	0.0
Q8VXB5		793	Putative potassium transp	no	no	0.992	0.974	0.635	0.0
O22881		794	Potassium transporter 2 O	no	no	0.975	0.957	0.641	0.0
Q8H3P9		811	Potassium transporter 7 O	no	no	0.983	0.944	0.571	0.0
Q942X8		783	Probable potassium transp	no	no	0.988	0.983	0.546	0.0

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function desciption

 Score = 1275 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/783 (80%), Positives = 699/783 (89%), Gaps = 5/783 (0%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           M+ E+G YQN  KKESWRTVLTLAYQSLGVVYGDLS SPLYVYKSTFAEDI HSE+NEEI
Sbjct: 1   MEIESGSYQN-AKKESWRTVLTLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSESNEEI 59

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           FG LSFIFWT+TLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLP+ QLADE+L
Sbjct: 60  FGVLSFIFWTITLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPSCQLADEQL 119

Query: 121 SEYKKDV--SSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVF 178
            EYK D   SS  P+S F + LKSTLE + VLQ+ LLVL LIGTCMVIGDGVLTPA+SVF
Sbjct: 120 IEYKTDSIGSSSMPQSGFAASLKSTLEKHGVLQKILLVLALIGTCMVIGDGVLTPAISVF 179

Query: 179 SAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIG 238
           SAVSG+ELS +KEHHKY+E+P AC+ILIGLFALQHYGTHRVGFLFAPV+L+WL+CISAIG
Sbjct: 180 SAVSGVELSMSKEHHKYIELPAACVILIGLFALQHYGTHRVGFLFAPVILLWLMCISAIG 239

Query: 239 LYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSI 298
           +YNIFHWNPHVYQALSP YMYKF+KKTQ  GWMSLGGILLCITGSEAMFADLGHFSQLSI
Sbjct: 240 VYNIFHWNPHVYQALSPYYMYKFLKKTQSRGWMSLGGILLCITGSEAMFADLGHFSQLSI 299

Query: 299 KIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVG 358
           KIAFTSLVYPSLILAYMGQAAYLSQHH+++++Y IGFYVSVPE+LRWPVLVIAILAAVVG
Sbjct: 300 KIAFTSLVYPSLILAYMGQAAYLSQHHIIESEYNIGFYVSVPERLRWPVLVIAILAAVVG 359

Query: 359 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 418
           SQAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINWILM+LCLAVTIGFRDT
Sbjct: 360 SQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWILMVLCLAVTIGFRDT 419

Query: 419 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFL 478
           KR+GNASGLAVITVMLVTTCLMSLVIVLCW KSV FAI FV FFGTIE+LYFSASLIKFL
Sbjct: 420 KRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSASLIKFL 479

Query: 479 EGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIH 538
           EGAWVPIALAF FL+ MC WHYGTLK+YE+D+QNKVS+NWLLSL  +LGI RVRG+GLIH
Sbjct: 480 EGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVRGLGLIH 539

Query: 539 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCI 598
           TELVSG+PAIFSHFVTNLPAFHQVLVFLC+KSVPVPHVRP+ERFLVG IGP+++RIYRCI
Sbjct: 540 TELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEFRIYRCI 599

Query: 599 VRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 658
           VR+GYRDVHKDD EFE DLVCSIAEFIR+ +     A E   +DDD+M+VVGTCS++ +G
Sbjct: 600 VRFGYRDVHKDDFEFEGDLVCSIAEFIRTEAETAATAAETNGEDDDRMSVVGTCSTYMQG 659

Query: 659 IQMSEDDVIVNIDSPGTSEL--REIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELME 716
           I+   +  I + D PGTSE+   + +  +  K KKRVRFVVPE+PKI++E  +EL EL E
Sbjct: 660 IEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTE 719

Query: 717 AREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMI 776
           ARE G+AYI+G++Y+KAK GS  LK+L IN GYEFLRRNTR P   L+ PHASTLEVGMI
Sbjct: 720 AREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHASTLEVGMI 779

Query: 777 YHV 779
           Y+V
Sbjct: 780 YNV 782

Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9M7J9\|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2	Back alignment and function description

>sp\|Q6YWQ4\|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1	Back alignment and function description

>sp\|Q67VS5\|HAK10_ORYSJ Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1	Back alignment and function description

>sp\|Q5Z6K9\|HAK24_ORYSJ Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

>sp\|Q8VXB5\|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2	Back alignment and function description

>sp\|O22881\|POT2_ARATH Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		779
224111286		780	predicted protein [Populus trichocarpa]	0.998	0.997	0.869	0.0
224099721		780	predicted protein [Populus trichocarpa]	0.998	0.997	0.866	0.0
255587842		774	Potassium transporter, putative [Ricinus	0.982	0.988	0.876	0.0
147771543		779	hypothetical protein VITISV_038658 [Viti	0.998	0.998	0.865	0.0
359473437		794	PREDICTED: potassium transporter 6-like	0.984	0.965	0.869	0.0
359488715		775	PREDICTED: potassium transporter 8-like	0.982	0.987	0.812	0.0
311692753		786	high affinity potassium transporter [Sal	0.998	0.989	0.801	0.0
255552638		767	Potassium transporter, putative [Ricinus	0.978	0.993	0.815	0.0
297841767		783	hypothetical protein ARALYDRAFT_894830 [	0.998	0.993	0.803	0.0
449446644		771	PREDICTED: potassium transporter 8-like	0.989	1.0	0.798	0.0

>gi\|224111286\|ref\|XP_002315804.1\| predicted protein [Populus trichocarpa] gi\|222864844\|gb\|EEF01975.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1403 bits (3632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/781 (86%), Positives = 734/781 (93%), Gaps = 3/781 (0%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           MD E+GV+QN VKKESW+TVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI+HSETNEEI
Sbjct: 1   MDLESGVFQNHVKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEI 60

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           +G LSF+FWTLTLVPLLKYVFIVL+ADDNGEGGTFALYSLLCRHAR+NSLPN Q+ADEEL
Sbjct: 61  YGVLSFVFWTLTLVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARINSLPNCQVADEEL 120

Query: 121 SEYKKDVSS--LGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVF 178
            EYKKD ++  L P ++FG +LKSTLE +RVLQRFLL+L LIGTCMVIGDGVLTPALSVF
Sbjct: 121 YEYKKDAANTCLTPTTAFGLRLKSTLEKHRVLQRFLLLLALIGTCMVIGDGVLTPALSVF 180

Query: 179 SAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIG 238
           SAVSGLELS AKEHHKYVEVPVAC ILI LFALQHYGTHRVGFLFAPVVL+WLLCISAIG
Sbjct: 181 SAVSGLELSMAKEHHKYVEVPVACTILICLFALQHYGTHRVGFLFAPVVLMWLLCISAIG 240

Query: 239 LYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSI 298
           +YNI HWNPHVYQALSP YMYKF++KTQ+GGWMSLGGILLCITGSEAMFADLGHFSQLSI
Sbjct: 241 IYNIIHWNPHVYQALSPYYMYKFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSI 300

Query: 299 KIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVG 358
           +IAFTSLVYPSLILAYMGQAAYLSQHHV+DNDY IGFYVSVP KLRWPVLVIAILAAVVG
Sbjct: 301 QIAFTSLVYPSLILAYMGQAAYLSQHHVIDNDYHIGFYVSVPGKLRWPVLVIAILAAVVG 360

Query: 359 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 418
           SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINW LM+LCLAVTIGFRDT
Sbjct: 361 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTIGFRDT 420

Query: 419 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFL 478
           KR+GNASGLAVITVMLVTTCLMSLVIVLCW K+VF AICFV FFGTIEALYFSASLIKFL
Sbjct: 421 KRLGNASGLAVITVMLVTTCLMSLVIVLCWHKTVFLAICFVCFFGTIEALYFSASLIKFL 480

Query: 479 EGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIH 538
           EGAWVPIAL+FIFLIVMCVWHYGTLK YEFD+QNKVSINWLLSLGPSLGIVRVRGIGLIH
Sbjct: 481 EGAWVPIALSFIFLIVMCVWHYGTLKAYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIH 540

Query: 539 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCI 598
           TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR +ERFL+GHIGPR+YR+YRCI
Sbjct: 541 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRAKERFLIGHIGPREYRLYRCI 600

Query: 599 VRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 658
           VRYGYRDVHKDDMEFEKDLVCSIAE+IR+G+   NGA ++   +DDKMTVVGTC +HT+G
Sbjct: 601 VRYGYRDVHKDDMEFEKDLVCSIAEYIRTGNAEPNGARDEMESEDDKMTVVGTCCTHTDG 660

Query: 659 IQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAR 718
           IQ+ EDDV   I+S GTSELREI+SP V++P+KRVRF+VP+SPKI+R A +EL ELMEAR
Sbjct: 661 IQLREDDVD-KIESAGTSELREIRSPPVMQPRKRVRFIVPDSPKINRGAREELHELMEAR 719

Query: 719 EAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYH 778
           EAGIAYILGH YV+AKQGSS LKKLV+NYGYEFLRRN+R P+YALSVPHASTLEVGM+Y 
Sbjct: 720 EAGIAYILGHCYVRAKQGSSMLKKLVVNYGYEFLRRNSRAPAYALSVPHASTLEVGMVYR 779

Query: 779 V 779
           V
Sbjct: 780 V 780

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224099721\|ref\|XP_002311591.1\| predicted protein [Populus trichocarpa] gi\|222851411\|gb\|EEE88958.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255587842\|ref\|XP_002534415.1\| Potassium transporter, putative [Ricinus communis] gi\|223525338\|gb\|EEF27967.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|147771543\|emb\|CAN75895.1\| hypothetical protein VITISV_038658 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359473437\|ref\|XP_002264992.2\| PREDICTED: potassium transporter 6-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359488715\|ref\|XP_002274956.2\| PREDICTED: potassium transporter 8-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|311692753\|gb\|ADP95697.1\| high affinity potassium transporter [Salicornia europaea]	Back alignment and taxonomy information

>gi\|255552638\|ref\|XP_002517362.1\| Potassium transporter, putative [Ricinus communis] gi\|223543373\|gb\|EEF44904.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|297841767\|ref\|XP_002888765.1\| hypothetical protein ARALYDRAFT_894830 [Arabidopsis lyrata subsp. lyrata] gi\|297334606\|gb\|EFH65024.1\| hypothetical protein ARALYDRAFT_894830 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|449446644\|ref\|XP_004141081.1\| PREDICTED: potassium transporter 8-like [Cucumis sativus] gi\|449489448\|ref\|XP_004158314.1\| PREDICTED: potassium transporter 8-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		779
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.998	0.994	0.779	0.0
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.994	0.992	0.736	3.1e-312
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.898	0.881	0.623	1.2e-239
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.966	0.954	0.547	1.1e-222
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.792	0.866	0.578	9.7e-220
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.960	0.965	0.496	2.6e-196
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.970	0.949	0.473	3.7e-190
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.965	0.948	0.476	1.7e-187
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.978	0.925	0.463	2.2e-185
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.966	0.910	0.451	2.2e-176

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3190 (1128.0 bits), Expect = 0., P = 0.
 Identities = 610/783 (77%), Positives = 682/783 (87%)

Query:     1 MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
             M+ E+G YQN  KKESWRTVLTLAYQSLGVVYGDLS SPLYVYKSTFAEDI HSE+NEEI
Sbjct:     1 MEIESGSYQN-AKKESWRTVLTLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSESNEEI 59

Query:    61 FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
             FG LSFIFWT+TLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLP+ QLADE+L
Sbjct:    60 FGVLSFIFWTITLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPSCQLADEQL 119

Query:   121 SEYKKDV--SSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVF 178
              EYK D   SS  P+S F + LKSTLE + VLQ+ LLVL LIGTCMVIGDGVLTPA+SVF
Sbjct:   120 IEYKTDSIGSSSMPQSGFAASLKSTLEKHGVLQKILLVLALIGTCMVIGDGVLTPAISVF 179

Query:   179 SAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIG 238
             SAVSG+ELS +KEHHKY+E+P AC+ILIGLFALQHYGTHRVGFLFAPV+L+WL+CISAIG
Sbjct:   180 SAVSGVELSMSKEHHKYIELPAACVILIGLFALQHYGTHRVGFLFAPVILLWLMCISAIG 239

Query:   239 LYNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSI 298
             +YNIFHWNPHVYQALSP YMYKF+KKTQ  GWMSLGGILLCITGSEAMFADLGHFSQLSI
Sbjct:   240 VYNIFHWNPHVYQALSPYYMYKFLKKTQSRGWMSLGGILLCITGSEAMFADLGHFSQLSI 299

Query:   299 KIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPXXXXXXXXXXXG 358
             KIAFTSLVYPSLILAYMGQAAYLSQHH+++++Y IGFYVSVPE+LRWP           G
Sbjct:   300 KIAFTSLVYPSLILAYMGQAAYLSQHHIIESEYNIGFYVSVPERLRWPVLVIAILAAVVG 359

Query:   359 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 418
             SQAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINWILM+LCLAVTIGFRDT
Sbjct:   360 SQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWILMVLCLAVTIGFRDT 419

Query:   419 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVXXXXXXXXXXGTIEALYFSASLIKFL 478
             KR+GNASGLAVITVMLVTTCLMSLVIVLCW KSV          GTIE+LYFSASLIKFL
Sbjct:   420 KRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSASLIKFL 479

Query:   479 EGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIH 538
             EGAWVPIALAF FL+ MC WHYGTLK+YE+D+QNKVS+NWLLSL  +LGI RVRG+GLIH
Sbjct:   480 EGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVRGLGLIH 539

Query:   539 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCI 598
             TELVSG+PAIFSHFVTNLPAFHQVLVFLC+KSVPVPHVRP+ERFLVG IGP+++RIYRCI
Sbjct:   540 TELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEFRIYRCI 599

Query:   599 VRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 658
             VR+GYRDVHKDD EFE DLVCSIAEFIR+ +     A E   +DDD+M+VVGTCS++ +G
Sbjct:   600 VRFGYRDVHKDDFEFEGDLVCSIAEFIRTEAETAATAAETNGEDDDRMSVVGTCSTYMQG 659

Query:   659 IQMSEDDVIVNIDSPGTSELR--EIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELME 716
             I+   +  I + D PGTSE+R  + +  +  K KKRVRFVVPE+PKI++E  +EL EL E
Sbjct:   660 IEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTE 719

Query:   717 AREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMI 776
             ARE G+AYI+G++Y+KAK GS  LK+L IN GYEFLRRNTR P   L+ PHASTLEVGMI
Sbjct:   720 AREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHASTLEVGMI 779

Query:   777 YHV 779
             Y+V
Sbjct:   780 YNV 782

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006813 "potassium ion transport" evidence=ISS

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M7J9	POT8_ARATH	No assigned EC number	0.7547	0.9922	0.9897	no	no
Q6YWQ4	HAK25_ORYSJ	No assigned EC number	0.7291	0.9602	0.9714	yes	no
Q8W4I4	POT6_ARATH	No assigned EC number	0.8007	0.9987	0.9948	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_X0355	potassium ion transporter family protein (780 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		779
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-146
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	1e-114
TIGR00794		688	TIGR00794, kup, potassium uptake protein	2e-11
COG0531		466	COG0531, PotE, Amino acid transporters [Amino acid	0.003

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

 Score = 1590 bits (4118), Expect = 0.0
 Identities = 689/780 (88%), Positives = 730/780 (93%), Gaps = 2/780 (0%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           MD E G  QN VKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI+HSETNEEI
Sbjct: 1   MDLEGGSPQNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEI 60

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           FG LSF+FWTLTL+PLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPN QLADEEL
Sbjct: 61  FGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEEL 120

Query: 121 SEYKKD-VSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFS 179
           SEYKKD  SS  P S FGS LKSTLE +RVLQRFLLVL LIGTCMVIGDGVLTPA+SVFS
Sbjct: 121 SEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFS 180

Query: 180 AVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGL 239
           AVSGLELS +KEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVL WLLCISAIG+
Sbjct: 181 AVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGV 240

Query: 240 YNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIK 299
           YNIFHWNPHVYQALSP YMYKF+KKTQ+GGWMSLGGILLCITGSEAMFADLGHFSQLSIK
Sbjct: 241 YNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIK 300

Query: 300 IAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGS 359
           IAFTSLVYPSLILAYMGQAAYLS+HHV+++DYRIGFYVSVPEKLRWPVLVIAILAAVVGS
Sbjct: 301 IAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGS 360

Query: 360 QAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTK 419
           QAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINW LM+LCLAVT+GFRDTK
Sbjct: 361 QAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTK 420

Query: 420 RMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLE 479
           R+GNASGLAVITVMLVTTCLMSLVIVLCW KSV  AICF+FFFGTIEALYFSASLIKFLE
Sbjct: 421 RLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLE 480

Query: 480 GAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHT 539
           GAWVPIAL+FIFL+VM VWHYGTLK+YEFD+QNKVSINWLLSLGPSLGIVRVRGIGLIHT
Sbjct: 481 GAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHT 540

Query: 540 ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIV 599
           ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVG IGP++YR+YRCIV
Sbjct: 541 ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIV 600

Query: 600 RYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGI 659
           RYGYRDVHKDDMEFEKDLVCSIAEFIRS     NGA E+   +D++MTVVGTCS+H EGI
Sbjct: 601 RYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGI 660

Query: 660 QMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEARE 719
           Q+ EDD     +  GTSELREI+SP V +PKKRVRFVVPESPKIDR A +ELQELMEARE
Sbjct: 661 QLREDDSD-KQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEARE 719

Query: 720 AGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 779
           AG+AYILGHSYV+AKQGSS +KKLVINYGY+FLRRN+R P YALSVPHASTLEVGM+YHV
Sbjct: 720 AGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779

Length = 779

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		779
PLN00149		779	potassium transporter; Provisional	100.0
PLN00148		785	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	90.0

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.9e-257  Score=2183.70  Aligned_cols=777  Identities=88%  Similarity=1.394  Sum_probs=701.1

Q ss_pred             CCccccccccccccccHHHHHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCccceehhhHHHHHHHHHhhhheee
Q 004007            1 MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYV   80 (779)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~La~~slGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvlSLIfWtLtliv~iKYv   80 (779)
                      ||.|.|.+.++.++.+|+.++.|||||+|||||||||||||||+++|+++++..++++||+|+|||||||||||+++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv   80 (779)
T PLN00149          1 MDLEGGSPQNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYV   80 (779)
T ss_pred             CCcccCccccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhE
Confidence            79999988777888999999999999999999999999999999999876667799999999999999999999999999


Q ss_pred             eEEEEecCCCCChHHHHHHHHhcccccccCCCCCcchhhhhhhccccCCCCCC-CCcchhhhhhhhhchhhHHHHHHHHh
Q 004007           81 FIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPK-SSFGSKLKSTLESYRVLQRFLLVLTL  159 (779)
Q Consensus        81 ~ivl~Adn~GEGG~fALysLl~r~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~l~l  159 (779)
                      +|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|..+.+ .+++.++|++||+++.+|++++++|+
T Consensus        81 ~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l  160 (779)
T PLN00149         81 FIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLAL  160 (779)
T ss_pred             EEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999877533323 34567899999999989999999999


Q ss_pred             hhhhhhccCccccCchhhhhhhccccccccccccceEEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHHH
Q 004007          160 IGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGL  239 (779)
Q Consensus       160 ~G~~m~~gDgvlTPAiSVLSAveGl~v~~p~~~~~~v~v~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWf~~i~~~Gi  239 (779)
                      +|+||+||||||||||||||||||||++.|...++++++||||+||++||++||+||+|||++|||||++||++||++|+
T Consensus       161 ~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGi  240 (779)
T PLN00149        161 IGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGV  240 (779)
T ss_pred             HHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999765454666999999999999999999999999999999999999999999


Q ss_pred             HhhcccCcceeeecCHHHHHHHHHhcCCceEeeehhhhhhhcchhhhhccCCCCCccceeeehhhhhhhHHHHhccchhh
Q 004007          240 YNIFHWNPHVYQALSPCYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAA  319 (779)
Q Consensus       240 yni~~~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~I~~aw~~~V~P~L~l~Y~GQ~A  319 (779)
                      |||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||
T Consensus       241 yni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA  320 (779)
T PLN00149        241 YNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAA  320 (779)
T ss_pred             HHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCccccccceeeccCcchhHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeech
Q 004007          320 YLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPE  399 (779)
Q Consensus       320 ~ll~~p~~~~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~  399 (779)
                      ||++||+..++++||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+
T Consensus       321 ~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~  400 (779)
T PLN00149        321 YLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPE  400 (779)
T ss_pred             HHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHH
Confidence            99999933335677999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhheeEEeecCcchhcccccceehhHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHhhhcccC
Q 004007          400 INWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLE  479 (779)
Q Consensus       400 vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~  479 (779)
                      |||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+|
T Consensus       401 vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~  480 (779)
T PLN00149        401 INWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLE  480 (779)
T ss_pred             HHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHhhhhHHHHHHHhhccCCChHHHHhcCCCCCCccccCcEEEEeCCCCCchhhhhhhhhhcccc
Q 004007          480 GAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF  559 (779)
Q Consensus       480 GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~l  559 (779)
                      |||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++
T Consensus       481 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~l  560 (779)
T PLN00149        481 GAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF  560 (779)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             ceEEEEEEEEEecccccCCCccEEEEEecCCCccEEEEEEEEeeecccCCchHHHHHHHHHHHHHHHcCCCCCCCCCCCC
Q 004007          560 HQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDP  639 (779)
Q Consensus       560 he~~Vfv~I~~~~vP~V~~~eR~~v~~l~~~~~~~yR~~vryGY~d~~~~~~~F~~~lv~~L~~FI~~e~~~~~~~~~~~  639 (779)
                      ||++||||||++|+|+||++|||++++++++++++|||++||||||.+++++|||++|+++|++|||+|+.+.+.++++.
T Consensus       561 he~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~  640 (779)
T PLN00149        561 HQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENE  640 (779)
T ss_pred             cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccc
Confidence            99999999999999999999999999999998999999999999999998899999999999999999875321111101


Q ss_pred             CCCCCCcceecccCCCCCCcccccccc-ccccCCCCCccccccCCCcccCCCcccccccCCCCccchhHHHHHHHHHHHH
Q 004007          640 YKDDDKMTVVGTCSSHTEGIQMSEDDV-IVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAR  718 (779)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~eEL~~L~~A~  718 (779)
                      ++.++++++.++.+....+....++.. ...+.  +..+.....++..+..+|+++|+.+++.+.+++++||+++|++||
T Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~  718 (779)
T PLN00149        641 EGEDERMTVVGTCSTHLEGIQLREDDSDKQEPA--GTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAR  718 (779)
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHH
Confidence            122445555543322111100000000 00000  000000000000012345678876655556688999999999999


Q ss_pred             HcCcEEEEeeeEEEEcCCCChHHHHHHHHHHHHHhhccCCCCcccccCCCCeEEeecEEEC
Q 004007          719 EAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV  779 (779)
Q Consensus       719 eaGVvYIlG~s~VkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v  779 (779)
                      |+||+||+||++|||||+|+|+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus       719 eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v  779 (779)
T PLN00149        719 EAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV  779 (779)
T ss_pred             HcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            9999999999999999999999999999999999999999999999999999999999997

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		779
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 48.7 bits (115), Expect = 8e-06
 Identities = 117/788 (14%), Positives = 217/788 (27%), Gaps = 332/788 (42%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI--KHSE--- 55
           MD ETG +Q               YQ     Y D+    L V++  F ++   K  +   
Sbjct: 7   MDFETGEHQ---------------YQ-----YKDI----LSVFEDAFVDNFDCKDVQDMP 42

Query: 56  ----TNEE---IFG------ALSFIFWTLTLVP----------LLK--YVFIV--LRADD 88
               + EE   I            +FWTL              +L+  Y F++  ++ + 
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102

Query: 89  NGEGGTFALYSLLCRHARVNSLPN-GQLAD-------EELSEYKKDVSSLGPKSS----- 135
                   +Y       + + L N  Q+         +   + ++ +  L P  +     
Sbjct: 103 RQPSMMTRMYI-----EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 136 ---FGSKLKSTL-----ESYRVLQRF---LLVLTLIGTCMVIGDGVLTPALSVFSAVSGL 184
               G   K+ +      SY+V  +    +  L L   C    + VL     +   +   
Sbjct: 158 VLGSG---KTWVALDVCLSYKVQCKMDFKIFWLNL-KNCNSP-ETVLEMLQKLLYQIDP- 211

Query: 185 ELSTAKEHHKYVEVPVACII--LIGLFALQHYGTHRVGFLFAPVVLIWLLCISAIGLYNI 242
             ++  +H   +++ +  I   L  L   + Y             L+    +    L N+
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----------ENCLL----V----LLNV 253

Query: 243 FHWNPHVYQALSP-CYMYKFVKKTQKGGWMSLGGILLCITGSEAMFADLG-----HFSQL 296
              N   + A +  C       K             L  T  + +   L      H S  
Sbjct: 254 --QNAKAWNAFNLSC-------KI------------LLTTRFKQVTDFLSAATTTHISLD 292

Query: 297 SIKIAFT---SLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAIL 353
              +  T        SL+L Y+          VL  +         P         ++I+
Sbjct: 293 HHSMTLTPDEVK---SLLLKYLDCRPQDLPREVLTTN---------P-------RRLSII 333

Query: 354 AAVVGSQAIITGTF---------SIIKQC-------------SALGCFPR-VKIVHTSSK 390
           A  +         +         +II+                 L  FP           
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH------- 386

Query: 391 IHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQK 450
                 IP I  +L ++   V                    VM+V   L    +V    K
Sbjct: 387 ------IPTI--LLSLIWFDVI----------------KSDVMVVVNKLHKYSLVEKQPK 422

Query: 451 SVFFAICFVFFFGTIEALYFS--------ASL-IKFLEGAWVPIALAFIFLIVMCVWHYG 501
                        +I ++Y           +L    ++                   HY 
Sbjct: 423 ESTI---------SIPSIYLELKVKLENEYALHRSIVD-------------------HYN 454

Query: 502 TLKKYEFDLQNKVSIN--WLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF 559
             K ++ D      ++  +   +G  L  +        H E ++    +F  F       
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE-------HPERMTLFRMVFLDF------- 500

Query: 560 HQVLVFLCIKSVPVPHVRPEERFL---VGHIGP------------RQYRIYRCIVRYGYR 604
                                RFL   + H               +Q + Y+    Y   
Sbjct: 501 ---------------------RFLEQKIRHDSTAWNASGSILNTLQQLKFYK---PY--- 533

Query: 605 DVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQ---M 661
            +  +D ++E+ LV +I +F+           E+             CS +T+ ++   M
Sbjct: 534 -ICDNDPKYER-LVNAILDFLPK-------IEENLI-----------CSKYTDLLRIALM 573

Query: 662 SEDDVIVN 669
           +ED+ I  
Sbjct: 574 AEDEAIFE 581

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		779
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.39
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.19
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	94.98

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=96.39  E-value=0.033  Score=61.46  Aligned_cols=99  Identities=19%  Similarity=0.198  Sum_probs=54.7

Q ss_pred             ehhHHHHHHHHHhhhcccccccccchhhH----HHHHHHHHHHHHHHhhcccCccee----eecCHHHHHHHHHhcCCce
Q 004007          198 VPVACIILIGLFALQHYGTHRVGFLFAPV----VLIWLLCISAIGLYNIFHWNPHVY----QALSPCYMYKFVKKTQKGG  269 (779)
Q Consensus       198 v~is~~ILv~LF~iQ~~GT~kvg~~FgPI----m~vWf~~i~~~Giyni~~~~p~Vl----~AlnP~ya~~f~~~~~~~g  269 (779)
                      ..+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..+
T Consensus       131 ~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  203 (511)
T 4djk_A          131 TIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVGT  203 (511)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTTT
T ss_pred             HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccchH
Confidence            45788888888899999988777654332    222344555667766654333211    1122211       12345


Q ss_pred             EeeehhhhhhhcchhhhhccCCCCC--ccceeeehh
Q 004007          270 WMSLGGILLCITGSEAMFADLGHFS--QLSIKIAFT  303 (779)
Q Consensus       270 ~~~LG~V~L~iTGaEALyADlGHFg--~~~I~~aw~  303 (779)
                      |..+..++.+.+|-|+.-.=-+-.-  +|.+..|=.
T Consensus       204 ~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~  239 (511)
T 4djk_A          204 LVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML  239 (511)
T ss_dssp             TTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence            6677888999999998644333332  344544433

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00