Citrus Sinensis ID: 004016

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------78
MNPGNTSYPNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYAPYIE
ccccccccccccEEEccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHccccccEEEEEEccccccccccccEEEEEEEcccccHHHHHHHHHHHcccccEEEEEEEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHHHccccEEEEccccccccccccccccccccccccHHHHHHHcccccccEEEEEEEEcccccccc
ccccccccccccccccccccccEEEEcccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHEEEEHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccHccccccccccccccEEEEEEEccccccHHHHHHHHHcccccccEEEEEEEEEEcccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccHcHHHcccccccHHHcccccccccEEEEEEEEEccccccc
mnpgntsypnttvyynpiagrnmttlceplatfrgatpflRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGialgpsllsrnqelkelvfppkavmAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMmrktpegkplkqdHLVALNVIVLVVALVGeltgqnsylgpfilgittpvtppmgslladKIQYFVWVAFIPcfiintgrrvdlYSIQFNHFLAVEMVILIAGTVKTFAIVIpclyskipFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILvcipendhvpTAINllkasnppqshvgVYVMNLEEyigrsmpvviphrldknpssskpakidpLLHAFFRYQQTNKAYVSVQCFTavapyasmhdDICSMAFQKATSLiifpflkteptltkKVINnvlsmspcsigllydrslaidyrsfQCRRVCVLFIGGADDREALALGarmgrnpsihLTVTRFVvtnptmsdfidedrdqaMINDFrfvnldsknVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVvgdllasddfksrASVLVIQQQAYAPYIE
mnpgntsypntTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLkasnppqshVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGarmgrnpsihlTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQqayapyie
MNPGNTSYPNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRlalsssllsslIGWFAPTFYIYASENALVGITRRTVFLMNvsvivmviiivfvvrpiiFWMMRKTPEGKPLKQDHlvalnvivlvvalvGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNveyveegveegfeTLRIINAIANDFDLFLAGRRHEGCLHVLQglgewieieelgvvgDLLASDDFKSRASVLVIQQQAYAPYIE
*********NTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPH*************IDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYA****
******S*PNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSR***********************CIPENDHVPTAINLLK********VGVYVMNLEEYIGRSMP*********************LLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVT***********RDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHE************IEIEELGVVGDLLASDDFKSRASVLV***********
********PNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYAPYIE
****NTSYPNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLD******KPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYA****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MNPGNTSYPNTTVYYNPIAGRNMTTLCEPLATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYAPYIE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query779 2.2.26 [Sep-21-2011]
Q9M007767 Cation/H(+) antiporter 27 yes no 0.942 0.956 0.335 1e-128
Q9M008784 Cation/H(+) antiporter 26 yes no 0.898 0.892 0.347 1e-120
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.889 0.844 0.346 1e-116
Q9LMJ1829 Cation/H(+) antiporter 14 no no 0.952 0.895 0.312 1e-105
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.905 0.857 0.306 1e-104
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.922 0.880 0.310 1e-103
O22920831 Cation/H(+) symporter 13 no no 0.949 0.890 0.308 1e-100
Q58P69783 Cation/H(+) antiporter 10 no no 0.881 0.877 0.305 4e-89
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.983 0.891 0.278 2e-88
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.929 0.893 0.299 1e-87
>sp|Q9M007|CHX27_ARATH Cation/H(+) antiporter 27 OS=Arabidopsis thaliana GN=CHX27 PE=2 SV=2 Back     alignment and function desciption
 Score =  459 bits (1182), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/764 (33%), Positives = 423/764 (55%), Gaps = 30/764 (3%)

Query: 26  LCEP------LATFRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFA 79
           LCEP      L   RG  P        F + ++ L + + +I + + Q LL+PFG+ AF 
Sbjct: 16  LCEPWVGAGSLGIGRGENPL------KFALPLLLLQISVFSIFSVSFQFLLRPFGKFAFL 69

Query: 80  SQLLGGIALGPSLLSRNQELKELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKS 139
           +Q+L GI LGPS++ RN++     F  ++V  I   E +  +F+ +  + ++D  ++K+ 
Sbjct: 70  TQMLAGICLGPSVIGRNKQYMATFFYARSVYIIESFEAICFLFICYITTCQVDTRMIKRV 129

Query: 140 GKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLP-----MVATLEATISFHVI 194
           GKLA + G+  F+IP +      + I   L+      + +P      VA +++T+ F V+
Sbjct: 130 GKLAFINGILLFLIPFVWGQFAAILISKRLKSGP---AGIPPVEFHHVAIVQSTMFFQVV 186

Query: 195 LANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVI 254
              L+ LK+LN+E GRLAL+S ++   + W      I    N  +    R  FL +V  +
Sbjct: 187 YGVLSSLKMLNTEPGRLALASMMVHDCLSWCFFMLNIAIKLNVDLPNKNRAAFL-SVLQM 245

Query: 255 VMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFIL 314
           +M+++I +V RP++ WM  +TPEG  LK  +L  + V++ +  L  E  G   + G  +L
Sbjct: 246 IMILVIAYVFRPLMLWMKNRTPEGHSLKASYLSVICVLLFISCLWAEFVGLPYFFGAVVL 305

Query: 315 GITTPVTPPMGSLLADKIQYFVWVAFIPCFIINTGRRVDLYSIQFNHFLAVEMVILIAGT 374
           G+ TP  PP+G+ L+DKI  FVW   +PC++I  G  +DL    +   +  E++  +   
Sbjct: 306 GLATPKRPPLGTGLSDKIGCFVWSVLMPCYVIGIGLNIDLSLFSWRDVIRFELLFGVVRF 365

Query: 375 VKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQRLQITDESFAIMVITAM 434
            K  AI +P LY K+P   A+ +G ++N +G+YD+Q++ +     +I+ +SF  MV++A 
Sbjct: 366 AKMIAIALPSLYYKVPLWHAILVGFIVNIQGLYDVQIYKQNFNYTKISSKSFGAMVMSAT 425

Query: 435 FQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASN 494
             S I I +VK +Y +  K   Y++RT+QHC   A LRIL C    + V   ++L++ S 
Sbjct: 426 VNSTIFIVIVKKLYQTMSKRNPYKRRTVQHCRVEAPLRILTCFRNREAVRPVLDLVELSR 485

Query: 495 PP-QSHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSSSKPAKIDPLLHAFFRYQQTNKAYV 553
           P   S + V+ +NLEE    S+P++I H  + +P    P++ D ++ AF  +++TN+  V
Sbjct: 486 PAIGSPLSVFAVNLEELNNHSLPLLIHHTQEISPFLV-PSRRDQIVKAFHNFEKTNQETV 544

Query: 554 SVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLL 613
            ++CFTAVAP  +MH+D+C++AF + T ++I           + +  N+L   PCS+ L 
Sbjct: 545 LIECFTAVAPRKTMHEDVCAIAFDQETDIVILTLDAGIELWERLLCRNLLHNCPCSVALF 604

Query: 614 YDRSLAIDYRSFQCRRVCV----LFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPT 669
            DR    D+R    +++ +    +F+GG DDRE LA   R+  +PS+ L V R V  N  
Sbjct: 605 IDRGRLPDFRFVPLKKLTINIGAIFLGGPDDREMLAYATRLASHPSVELQVFRLVDQNGV 664

Query: 670 --MSDFIDEDRDQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGR 727
             + D ++ + D  +IN FR  N   KN+ + E  +EE    L ++    +DFDL + G 
Sbjct: 665 SPLRDMVERNHDMRVINVFRKEN-SEKNIIFREVRIEEAVNLLDLLRKEGDDFDLMMVGI 723

Query: 728 RHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQ 771
           RHE  L +L+GL EW +++ELG VGD+L S D +   SVL +QQ
Sbjct: 724 RHEENLLMLEGLSEWSDMKELGEVGDVLISKDLELSVSVLAVQQ 767
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M008|CHX26_ARATH Cation/H(+) antiporter 26 OS=Arabidopsis thaliana GN=CHX26 PE=2 SV=2 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMJ1|CHX14_ARATH Cation/H(+) antiporter 14 OS=Arabidopsis thaliana GN=CHX14 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1 Back     alignment and function description
>sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2 SV=2 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query779
224140527756 cation proton exchanger [Populus trichoc 0.928 0.956 0.419 1e-166
255571495751 monovalent cation:proton antiporter, put 0.890 0.924 0.394 1e-153
449439575816 PREDICTED: cation/H(+) antiporter 15-lik 0.955 0.911 0.349 1e-131
359481262826 PREDICTED: cation/H(+) antiporter 15-lik 0.982 0.926 0.340 1e-130
255543675818 monovalent cation:proton antiporter, put 0.971 0.925 0.348 1e-130
147779220826 hypothetical protein VITISV_019795 [Viti 0.982 0.926 0.338 1e-130
359478513805 PREDICTED: cation/H(+) antiporter 15-lik 0.956 0.925 0.340 1e-129
297745810 1283 unnamed protein product [Vitis vinifera] 0.956 0.580 0.340 1e-129
225434431777 PREDICTED: cation/H(+) antiporter 15-lik 0.942 0.944 0.357 1e-128
147819592 1443 hypothetical protein VITISV_020324 [Viti 0.942 0.508 0.357 1e-128
>gi|224140527|ref|XP_002323634.1| cation proton exchanger [Populus trichocarpa] gi|222868264|gb|EEF05395.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 313/746 (41%), Positives = 482/746 (64%), Gaps = 23/746 (3%)

Query: 45  SHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVF 104
           ++F    V + + LVT+L    Q LL PFG+  F  ++LGGIA+ PS L   + + + +F
Sbjct: 10  NYFSFSPVLVQIGLVTLLKTFFQFLLMPFGQQRFVPEILGGIAISPSFLGHMERINKYLF 69

Query: 105 PPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLF 164
            P++VM ++  E  GL+F+ F LS R+D  +VKK GKLA+VIG+ +F++P +++ L   +
Sbjct: 70  APRSVMILDTFEVFGLVFVLFLLSLRLDITVVKKCGKLAVVIGLASFLVPTVITTLIASY 129

Query: 165 IRDGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGW 224
           +R   +L  EL   + +VA + +T SFHV+ + L +LKLLNSE+GRLALSSS++S L  W
Sbjct: 130 LRGFFKL--ELHEEVHVVAVIISTTSFHVVFSILEDLKLLNSELGRLALSSSMVSGLFSW 187

Query: 225 FAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQD 284
               F     E + +G +++ + L  ++ I M++IIVF  RP+++WM+R+TPEG+PLKQ 
Sbjct: 188 SFIVFLANFKEASKLG-SKKGIILAQITRIPMIMIIVFAFRPMMWWMVRRTPEGQPLKQS 246

Query: 285 HLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCF 344
           +++ ++ +VL    +GE+ G +   GP +LG+ TP  P + S L +KI  FV    +PCF
Sbjct: 247 YILIISTMVLFCGFLGEINGHHFLFGPLVLGLATPDNPQLHSCLMEKIGTFVNSFLVPCF 306

Query: 345 IINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCR 404
           +++ GR ++L+   F H     M++ I+   K  AI+   LY K+PF DAL+LGL+LNC+
Sbjct: 307 LVDVGRGINLFLATFKHVAFALMLVFISTLTKLSAIIATSLYYKMPFRDALSLGLILNCK 366

Query: 405 GIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQH 464
           G  D  ++  A +   +  E F+I+V+TAM QS  +  LV+L+YD SR+Y+AY+ RTIQ+
Sbjct: 367 GFVDALLYNAANKFEGLKTELFSILVVTAMLQSVFVTLLVRLLYDPSRRYIAYKPRTIQN 426

Query: 465 CESHAELRILVCIPENDHVPTAINLLKASNPPQ-SHVGVYVMNLEEYIGRSMPVVIPHRL 523
               +EL+I+ C+ + D V + IN+L+A+NP + S + VYV+NL++ I  ++P+ I HRL
Sbjct: 427 TGLRSELQIVACLHQQDDVRSIINVLEATNPTRASPIAVYVLNLKKLIEGALPLFISHRL 486

Query: 524 DKNPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLI 583
           + N SS++  KID + +AF++++Q N+  V+VQCFT+ APYA+MHDD+C+M  +K+TSL+
Sbjct: 487 N-NISSAE--KIDIVSNAFYQFEQQNQGLVTVQCFTSFAPYATMHDDVCTMVLEKSTSLV 543

Query: 584 IFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRSFQCR---RVCVLFIGGADD 640
           I PF + +    + V  N+L  +PCS+ LL +R   +D      R   +VCV+FIGGADD
Sbjct: 544 IVPFQRYDSPSMRAVNRNILVKAPCSVALLVNRG-NLDRYILSGRLTMKVCVVFIGGADD 602

Query: 641 REALALGARMGRNPSIHLTVTRFVVTNPTMSDFIDEDRDQAMINDFRFVNLDSKNVEYVE 700
           RE LA   RM  +P+I L V R V  + T +D I++ R+  MIN+FR  N D   V Y E
Sbjct: 603 RETLAYAQRMSGHPNIRLIVLRLVSVDQTFTDLIEKRRNSNMINEFRLNNNDCPRVSYKE 662

Query: 701 EGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEI-EELGVVGDLLASDD 759
           E V  G +T+R++ A+ NDFDL + GRRH+     L GL EW EI ++LGV+GD++AS D
Sbjct: 663 EMVRHGNDTVRLLGAMCNDFDLIMVGRRHDPDSTQLIGLSEWGEIDQDLGVIGDIMASKD 722

Query: 760 FKSRASVL-----------VIQQQAY 774
           F+ +AS+L           +IQ Q Y
Sbjct: 723 FECKASILVVQQQASVVVEMIQNQKY 748

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255571495|ref|XP_002526695.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223533995|gb|EEF35717.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449439575|ref|XP_004137561.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449520557|ref|XP_004167300.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359481262|ref|XP_003632597.1| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255543675|ref|XP_002512900.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223547911|gb|EEF49403.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147779220|emb|CAN65585.1| hypothetical protein VITISV_019795 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478513|ref|XP_002277533.2| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745810|emb|CBI15866.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225434431|ref|XP_002277592.1| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147819592|emb|CAN59820.1| hypothetical protein VITISV_020324 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query779
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.783 0.742 0.324 5.4e-94
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.722 0.686 0.261 3.6e-82
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.956 0.896 0.275 2.7e-77
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.464 0.436 0.328 2.7e-77
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.840 0.818 0.295 1.1e-76
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.754 0.725 0.270 1.1e-74
TAIR|locus:2082102783 CHX10 "cation/H+ exchanger 10" 0.912 0.908 0.278 1.4e-69
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.745 0.676 0.229 3.2e-64
TAIR|locus:2205165815 ATCHX5 [Arabidopsis thaliana ( 0.905 0.865 0.274 3.7e-64
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.707 0.670 0.243 2.3e-63
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 869 (311.0 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
 Identities = 207/637 (32%), Positives = 342/637 (53%)

Query:    47 FPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPP 106
             F + +  L + LV ++T     +LKPF +    S++LGGI LGPS+L R+ +    +FP 
Sbjct:    35 FSLPLFVLQLTLVVVVTRFFVFILKPFRQPRVISEILGGIVLGPSVLGRSTKFAHTIFPQ 94

Query:   107 KAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIR 166
             ++VM +  +  VGL++  F +   +D  +V+K+GK A+ I +G  ++P ++    +  + 
Sbjct:    95 RSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGKRALTIAIGGMVLPFLIGAAFSFSMH 154

Query:   167 DGLELDDEL-RSTLPMVATLEATISFHVILAN-LTELKLLNSEIGRXXXXXXXXXXXIGW 224
                  +D L + T  +   +  +++   +LA  L ELKL+N+EIGR             W
Sbjct:   155 RS---EDHLGQGTYILFLGVALSVTAFPVLARILAELKLINTEIGRISMSAALVNDMFAW 211

Query:   225 FAPTFYIYASENALVGITRRTVFLMNXXXXXXXXXXXXXXXXXXFWMMRKTPEGKPLKQD 284
                   I  +E+         V + +                   W++RKTPEG+   + 
Sbjct:   212 ILLALAIALAESDKTSFASLWVMISSAVFIAVCVFVVRPGIA---WIIRKTPEGENFSEF 268

Query:   285 HXXXXXXXXXXXXXXGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCF 344
             H               +  G +S  G F+ G+  P   P+G  L +K++ FV    +P F
Sbjct:   269 HICLILTGVMISGFITDAIGTHSVFGAFVFGLVIP-NGPLGLTLIEKLEDFVSGLLLPLF 327

Query:   345 IINTGRRVDLYSIQFNH-FLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNC 403
                +G + ++ +IQ    +L + +VI +A   K    VI   +  +P  + + LGLLLN 
Sbjct:   328 FAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTVIVAFFHGMPVREGITLGLLLNT 387

Query:   404 RGIYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQ 463
             +G+ ++ V    K +  + DE+FA MV+ A+  + +I P+V ++Y   +K V+Y++RTIQ
Sbjct:   388 KGLVEMIVLNVGKDQKVLDDETFATMVLVALVMTGVITPIVTILYKPVKKSVSYKRRTIQ 447

Query:   464 HCESHAELRILVCIPENDHVPTAINLLKASNPPQ-SHVGVYVMNLEEYIGRSMPVVIPHR 522
               +  +ELR+LVC+    +VPT INLL+AS+P + S + +YV++L E  GR+  ++I H 
Sbjct:   448 QTKPDSELRVLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHN 507

Query:   523 LDKN--PSSSKP-AKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKA 579
               K+  P+ ++  A+ D +++AF  Y+Q + A+V+VQ  TA++PY++MH+D+CS+A  K 
Sbjct:   508 TRKSGRPALNRTQAQSDHIINAFENYEQ-HAAFVAVQPLTAISPYSTMHEDVCSLAEDKR 566

Query:   580 TSLIIFPFLKTEPT-----LTK---KVIN-NVLSMSPCSIGLLYDRSL--AIDYRSFQCR 628
              S II PF K +        T    +++N N+L  SPCS+G+L DR L  A    S    
Sbjct:   567 VSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLLENSPCSVGILVDRGLNGATRLNSNTVS 626

Query:   629 -RVCVLFIGGADDREALALGARMGRNPSIHLTVTRFV 664
              +V VLF GG DDREALA   RM ++P I LTV RF+
Sbjct:   627 LQVAVLFFGGPDDREALAYAWRMAQHPGITLTVLRFI 663
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205165 ATCHX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M007CHX27_ARATHNo assigned EC number0.33500.94220.9569yesno
Q9M008CHX26_ARATHNo assigned EC number0.34750.89850.8928yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00161222
cation proton exchanger (756 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query779
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-140
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 3e-22
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 5e-22
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 2e-07
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  432 bits (1113), Expect = e-140
 Identities = 250/763 (32%), Positives = 419/763 (54%), Gaps = 45/763 (5%)

Query: 47  FPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQELKELVFPP 106
           F + +  L + LV + T  +  +LKPF +    S++LGG+ LGPS+L +++     +FP 
Sbjct: 39  FSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIFPL 98

Query: 107 KAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIR 166
           ++VM +  +  +GL++  F +   +D  +++++GK A+ I +    +P  + +  +    
Sbjct: 99  RSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFH 158

Query: 167 DGLELDDELRSTLPMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFA 226
                  +    L +   L  T +F V+   L E+KL+N+E+GR+A+S++L++ +  W  
Sbjct: 159 QVSRNVHQGTFILFLGVALSVT-AFPVLARILAEIKLINTELGRIAMSAALVNDMCAWIL 217

Query: 227 PTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFVVRPIIFWMMRKTPEGKPLKQDHL 286
               I  +EN    +    V L   S +  V+   +VVRP I+W++R+TPEG+   + ++
Sbjct: 218 LALAIALAENDSTSLASLWVLL---SSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYI 274

Query: 287 VALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVAFIPCFII 346
             +   V++   + +  G +S  G F+ G+  P   P+G  L +K++ FV    +P F  
Sbjct: 275 CLILTGVMISGFITDAIGTHSVFGAFVFGLVIP-NGPLGVTLIEKLEDFVSGLLLPLFFA 333

Query: 347 NTGRRVDLYSIQ-FNHFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRG 405
            +G + ++  IQ    +  + +VI++A   K    +I   +  +PF + + LG L+N +G
Sbjct: 334 ISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKG 393

Query: 406 IYDIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHC 465
           + ++ V    + +  + DESFA+MV+ A+  +A+I P+V +VY  +R+ V Y++RTIQ  
Sbjct: 394 LVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRS 453

Query: 466 ESHAELRILVCIPENDHVPTAINLLKASNPPQ-SHVGVYVMNLEEYIGRSMPVVIPHRLD 524
           +  AELR+LVC+    +VPT INLL+AS+P + S + +YV++L E  GR+  ++I H   
Sbjct: 454 KHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTR 513

Query: 525 K---NPSSSKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSMAFQKATS 581
           K      +   A+ D +++AF  Y+Q +   VSVQ  TA++PY++MH+D+C++A  K  S
Sbjct: 514 KSGRPALNRTQAQSDHIINAFENYEQ-HAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVS 572

Query: 582 LIIFPFLK-------TEPT--LTKKVINNVLSMSPCSIGLLYDRSL---AIDYRSFQCRR 629
           LII PF K        E T    + V  NVL+ +PCS+G+L DR L        +     
Sbjct: 573 LIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHH 632

Query: 630 VCVLFIGGADDREALALGARMGRNPSIHLTVTRFV---------------VTNPTMSDFI 674
           V VLF GG DDREALA   RM  +P I LTV RF+                ++P +    
Sbjct: 633 VAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVE 692

Query: 675 DEDR-----DQAMINDFRFVNLDSKNVEYVEEGVEEGFETLRIINAIANDFDLFLAGRRH 729
            + +     D+  IN+FR  N  ++++ Y E+ V  G ET+  I ++ +  DLF+ G R 
Sbjct: 693 TDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVG-RG 751

Query: 730 EGCLHVL-QGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQ 771
           +G +  L  GL +W E  ELG +GDLLAS DF +  SVLV+QQ
Sbjct: 752 QGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQ 794

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 779
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.96
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.96
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.93
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.92
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.9
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.74
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.69
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.66
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.5
PRK11175305 universal stress protein UspE; Provisional 99.42
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.16
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.12
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.1
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.06
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.04
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.03
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.9
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.89
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.85
cd01987124 USP_OKCHK USP domain is located between the N-term 98.35
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.26
PRK09982142 universal stress protein UspD; Provisional 98.15
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.14
PRK15118144 universal stress global response regulator UspA; P 98.1
PRK15456142 universal stress protein UspG; Provisional 98.09
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.06
PRK15005144 universal stress protein F; Provisional 98.05
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.04
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.03
PRK15005144 universal stress protein F; Provisional 97.92
cd00293130 USP_Like Usp: Universal stress protein family. The 97.85
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 97.84
PRK09982142 universal stress protein UspD; Provisional 97.82
cd00293130 USP_Like Usp: Universal stress protein family. The 97.81
cd01987124 USP_OKCHK USP domain is located between the N-term 97.79
PRK10116142 universal stress protein UspC; Provisional 97.73
PRK15118144 universal stress global response regulator UspA; P 97.69
PRK10116142 universal stress protein UspC; Provisional 97.69
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 97.62
PRK15456142 universal stress protein UspG; Provisional 97.62
PRK11175305 universal stress protein UspE; Provisional 97.5
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.47
TIGR00698335 conserved hypothetical integral membrane protein. 97.44
COG0385319 Predicted Na+-dependent transporter [General funct 97.34
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 97.21
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 97.19
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 97.11
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.79
COG3180352 AbrB Putative ammonia monooxygenase [General funct 96.66
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.63
TIGR00832328 acr3 arsenical-resistance protein. The first prote 96.5
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 96.49
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 96.45
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 96.42
COG0589154 UspA Universal stress protein UspA and related nuc 96.29
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.09
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.05
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 95.96
COG3493438 CitS Na+/citrate symporter [Energy production and 95.89
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.86
PRK10669558 putative cation:proton antiport protein; Provision 95.65
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 95.6
COG0589154 UspA Universal stress protein UspA and related nuc 95.45
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 95.43
PRK05326562 potassium/proton antiporter; Reviewed 95.33
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.31
PRK03659601 glutathione-regulated potassium-efflux system prot 95.28
PF03956191 DUF340: Membrane protein of unknown function (DUF3 95.16
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 95.14
COG2855334 Predicted membrane protein [Function unknown] 94.94
PRK03818552 putative transporter; Validated 94.92
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 94.72
TIGR00841286 bass bile acid transporter. Functionally character 94.65
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 94.45
PRK12652357 putative monovalent cation/H+ antiporter subunit E 94.43
TIGR00698335 conserved hypothetical integral membrane protein. 94.15
PRK04972558 putative transporter; Provisional 93.54
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 93.14
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.94
PRK10490 895 sensor protein KdpD; Provisional 92.78
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 92.63
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 92.53
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 92.51
PLN03159832 cation/H(+) antiporter 15; Provisional 92.08
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 91.0
COG2855334 Predicted membrane protein [Function unknown] 90.87
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 89.9
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 89.59
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 88.01
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 87.33
PRK10490 895 sensor protein KdpD; Provisional 86.75
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 86.17
PRK04972558 putative transporter; Provisional 85.95
PRK04288232 antiholin-like protein LrgB; Provisional 85.21
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 83.97
COG2985544 Predicted permease [General function prediction on 83.91
TIGR00808254 malonate_madM malonate transporter, MadM subunit. 83.7
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 83.59
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 81.87
PRK03818552 putative transporter; Validated 81.76
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 80.82
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.4e-152  Score=1355.97  Aligned_cols=735  Identities=33%  Similarity=0.611  Sum_probs=669.9

Q ss_pred             ccccccc------ccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHhcCccccCCcchh
Q 004016           26 LCEPLAT------FRGATPFLRRVTSHFPIMVVFLPMLLVTILTYAIQLLLKPFGEAAFASQLLGGIALGPSLLSRNQEL   99 (779)
Q Consensus        26 ~c~~~~~------~~~~~p~~~~~~l~~~l~~~l~~l~lil~~~~l~~~ll~rl~~P~iv~~IlaGiilGP~~lg~~~~~   99 (779)
                      +|+....      |+|+||      ++|++|++++|+++++++++++++++||+|||+++|||++|+++||+++|+++.+
T Consensus        18 ~c~~~~~~~s~g~~~g~~p------l~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~   91 (832)
T PLN03159         18 VCYAPMMITTNGIWQGDNP------LDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVF   91 (832)
T ss_pred             ccccCCCccCCcccccCCc------ccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhh
Confidence            6885322      999999      9999999999999999999999999999999999999999999999999999888


Q ss_pred             hhhcCCccchHHHHHHHHHHHHHHHHHHhhccChhHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhhhhhH
Q 004016          100 KELVFPPKAVMAINVIECVGLIFMFFTLSARIDKGIVKKSGKLAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTL  179 (779)
Q Consensus       100 ~~~~fp~~~~~~l~~l~~lGl~~llF~~Gle~d~~~l~~~~~~~~~ia~~~~l~p~~~g~~~~~~l~~~~~~~~~~~~~~  179 (779)
                      .+.+||.++.+.+++++++|++++||++|+|+|++.+||++|+++.+|+.++++|+++|++++++++. ..........+
T Consensus        92 ~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~-~~~~~~~~~~~  170 (832)
T PLN03159         92 ANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQ-VSRNVHQGTFI  170 (832)
T ss_pred             hhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccchhHHH
Confidence            99999988888999999999999999999999999999999999999999999999999988887743 21111123567


Q ss_pred             HHHHHHHhhhhHHHHHHHHHHcCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHH
Q 004016          180 PMVATLEATISFHVILANLTELKLLNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVII  259 (779)
Q Consensus       180 l~lg~~ls~Ts~~vv~~iL~el~l~~s~~g~l~ls~a~i~D~~~~ill~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  259 (779)
                      +++|+++|.||+|+++++|+|+|+++++.||+++++++++|+++|++++++ ..+...  +.+....++.++..++++++
T Consensus       171 l~~g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~-~~l~~~--~~~~~~~l~~~l~~~~f~~~  247 (832)
T PLN03159        171 LFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALA-IALAEN--DSTSLASLWVLLSSVAFVLF  247 (832)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHhc--CCcchhHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999888 665543  22223456777777888889


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHhhcCCCCCchhHHHHHHHHHHHHh
Q 004016          260 IVFVVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTPPMGSLLADKIQYFVWVA  339 (779)
Q Consensus       260 ~~~v~r~~~~~l~~~~~~~~~~~e~~~~~il~~~l~~~~~se~lg~~~~lGaflaGL~l~~~~p~~~~l~~kl~~~~~~l  339 (779)
                      +++++||++.|+.+|++++++.++.++.+++++++++++++|.+|+|+++|||++|+++|+ +|.++.+.+|++++++++
T Consensus       248 ~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~-~~~~~~l~ekle~~~~~l  326 (832)
T PLN03159        248 CFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGL  326 (832)
T ss_pred             HHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCC-cchHHHHHHHHHHHHHHH
Confidence            9999999999999999998888899999999999999999999999999999999999998 478999999999999999


Q ss_pred             hHHHHHHHhcccccccccchh-hHHHHHHHHHHHHHhhHHHHHHHHHhcCCChHHHHHHHHHhhhhhhhHHHHHHhhhhc
Q 004016          340 FIPCFIINTGRRVDLYSIQFN-HFLAVEMVILIAGTVKTFAIVIPCLYSKIPFMDALALGLLLNCRGIYDIQVFTRAKQR  418 (779)
Q Consensus       340 flPlFF~~~G~~~d~~~l~~~-~~~~~~~iiv~~~~~K~~~~~l~~~~~~~~~~~~l~lg~~l~~kG~~~l~~~~~~~~~  418 (779)
                      |+|+||+.+|+++|+..+... .|..+++++++++++|+++++++++++|+|++|++.+|++||+||+++++++++|++.
T Consensus       327 flPlFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~  406 (832)
T PLN03159        327 LLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQ  406 (832)
T ss_pred             HHHHHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhc
Confidence            999999999999999887543 4655667778889999999999999999999999999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHhHHHHHHHhhcccchhhhhhcccccccCCcccceEEEeecCCCChHHHHHHHHhcCCC-C
Q 004016          419 LQITDESFAIMVITAMFQSAIIIPLVKLVYDSSRKYVAYRKRTIQHCESHAELRILVCIPENDHVPTAINLLKASNPP-Q  497 (779)
Q Consensus       419 ~~i~~~~f~~lv~~~ll~t~i~~plv~~l~~p~~~~~~~~~r~i~~~~~~~e~riLv~i~~~~~v~~li~L~~~~~~~-~  497 (779)
                      |+++++.|++++++++++|.+++|+++++|||+||+..|++|++|+.++++|+|||+|+|++||+++|++|+|+++++ +
T Consensus       407 gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t~~  486 (832)
T PLN03159        407 EVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKR  486 (832)
T ss_pred             CccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999 9


Q ss_pred             CCceEEEEEeeeccCCCCccccccccCCCCCC---CCCCcchhHHHHHHHHHHhcCcceEEEEEEEeccCCChHHHHHHH
Q 004016          498 SHVGVYVMNLEEYIGRSMPVVIPHRLDKNPSS---SKPAKIDPLLHAFFRYQQTNKAYVSVQCFTAVAPYASMHDDICSM  574 (779)
Q Consensus       498 ~p~~v~~lhlvel~~r~~~~~~~~~~~~~~~~---~~~~~~~~i~~af~~~~~~~~~~v~v~~~t~vs~~~~m~~dI~~~  574 (779)
                      +|+++|++||||++||++|++++|+.+++...   ....++|+++++|+.|++++ ++|+||++|++|||++||||||++
T Consensus       487 sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~vs~~~~mh~dIc~~  565 (832)
T PLN03159        487 SPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHEDVCNL  565 (832)
T ss_pred             CCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEEeCcccHHHHHHHH
Confidence            99999999999999999999999987643211   12355899999999999764 579999999999999999999999


Q ss_pred             HhhcCccEEEeccccC---------CChhhHHHHHHhhhcCCCceEEEecCCCc-----ccccccccceEEEeecCCccH
Q 004016          575 AFQKATSLIIFPFLKT---------EPTLTKKVINNVLSMSPCSIGLLYDRSLA-----IDYRSFQCRRVCVLFIGGADD  640 (779)
Q Consensus       575 A~e~~~~lIilp~h~~---------~~~~~~~~n~~vl~~apCsVgIlvdrg~~-----~~~~~~~~~~i~v~f~GG~dd  640 (779)
                      |+||++|+||+||||.         ++..+|.+|+|||++||||||||||||..     +.+... + ||+++|+|||||
T Consensus       566 A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~~~~~-~-~v~~~F~GG~DD  643 (832)
T PLN03159        566 AEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVS-H-HVAVLFFGGPDD  643 (832)
T ss_pred             HHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCccccccccccc-e-eEEEEecCCcch
Confidence            9999999999999981         24689999999999999999999999965     122223 6 999999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEEEEEEecCCCCC--------------------CccchhhHHHHHHHhhhhcCCCCCEEEEE
Q 004016          641 REALALGARMGRNPSIHLTVTRFVVTNPTMS--------------------DFIDEDRDQAMINDFRFVNLDSKNVEYVE  700 (779)
Q Consensus       641 reAL~~a~rma~~~~v~ltv~~~~~~~~~~~--------------------~~~e~~~d~~~i~~~~~~~~~~~~v~y~e  700 (779)
                      ||||+||+|||+||++++||+||++++...+                    +++|+++||++++||+.++..+++|.|+|
T Consensus       644 REALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~v~y~E  723 (832)
T PLN03159        644 REALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTE  723 (832)
T ss_pred             HHHHHHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence            9999999999999999999999997532211                    35688999999999999998889999999


Q ss_pred             EeecChHHHHHHHHhhhcCCcEEEEcccCCCCcccccccccccCCCccchhhhhhhcCCCCCceeEEEEeeecc
Q 004016          701 EGVEEGFETLRIINAIANDFDLFLAGRRHEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAY  774 (779)
Q Consensus       701 ~~v~~~~e~~~~i~~~~~~~dL~iVGr~~~~~s~~~~gl~~w~e~~eLG~iGd~las~d~~~~~SvLVvqq~~~  774 (779)
                      |+|+|++||.++||+++++|||+||||+|+.+|++|+||+||+||||||+|||+|||+||++++||||||||+.
T Consensus       724 ~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~SVLVvQQ~~~  797 (832)
T PLN03159        724 KVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYVG  797 (832)
T ss_pred             EecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCceeEEEEEeecc
Confidence            99999999999999999999999999999888999999999999999999999999999999999999999964

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>TIGR00808 malonate_madM malonate transporter, MadM subunit Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query779
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 79/650 (12%), Positives = 177/650 (27%), Gaps = 197/650 (30%)

Query: 204 LNSEIGRLALS-SSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVF 262
           ++ E G        +LS     F   F     ++    I  +      +  I+M    V 
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE----IDHIIMSKDAVS 62

Query: 263 VVRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILG-ITTPVT 321
                +FW +    E                +V   V E+   N Y   F++  I T   
Sbjct: 63  GTL-RLFWTLLSKQEE---------------MVQKFVEEVLRIN-Y--KFLMSPIKTEQR 103

Query: 322 PPMGSLLADKIQYFV---W---VAFIPCFI-----INTGRRVDLYSIQFNHFLAVE-MV- 368
            P  S++           +     F    +         R+  L  ++    + ++ ++ 
Sbjct: 104 QP--SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA-LLELRPAKNVLIDGVLG 160

Query: 369 ----ILIAGTVKTFAIVIPCLYSKIPF----------------MDAL-ALGLLLNCRGIY 407
                +      ++ +       K+ F                ++ L  L   ++     
Sbjct: 161 SGKTWVALDVCLSYKVQ-----CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 408 DIQVFTRAKQRLQITDESFAIMVITAMFQSAIIIPLVKL--VYDSSRKYVAYRKRTIQ-- 463
                +  K R+         ++ +  +++ +++    L  V +          +     
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV----LLNVQN---------AKAWNAF 262

Query: 464 --HCESHAELRILVCIPENDHVPTAINLLKASNPPQSHV--GVYVMNLEEYIGRSMPVVI 519
              C      +IL+       V   ++    ++    H    +    ++  + +     +
Sbjct: 263 NLSC------KILL-TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK----YL 311

Query: 520 PHRLDKNPSSSKPAKIDPLLHA--------------FFRYQQTNKAYVSVQ-CFTAVAPY 564
             R    P        +P   +               +++   +K    ++     + P 
Sbjct: 312 DCRPQDLPREVL--TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP- 368

Query: 565 ASMHDDICSMAFQKATSLIIFPFLKTEPTLTKKVINNVLSMSPCSIGLLYDRSLAIDYRS 624
                +   M F     L +FP           +   +LS+       ++   +  D   
Sbjct: 369 ----AEYRKM-FD---RLSVFP----PSA---HIPTILLSL-------IWFDVIKSDVMV 406

Query: 625 F--QCRRVCVLFIGGADDREALALGARMGRNPSIHLTVTRFVVTNPTM-SDFIDEDRDQA 681
              +  +  ++     +   ++         PSI+L +   +     +    +D      
Sbjct: 407 VVNKLHKYSLVEKQPKESTISI---------PSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 682 MI--NDFRFVNLDS----------KNVEYVEEGVEEGFETLRIINAIANDFDLFLAGR-R 728
               +D     LD           KN+E+ E      F  + +      DF  FL  + R
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER--MTLFRMVFL------DFR-FLEQKIR 508

Query: 729 HEGCLHVLQGLGEWIEIEELGVVGDLLASDDFKSRASVLVIQQQAYAPYI 778
           H+           W      G + + L     K            Y PYI
Sbjct: 509 HDSTA--------W---NASGSILNTLQ--QLKF-----------YKPYI 534

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query779
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.9
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.51
3loq_A294 Universal stress protein; structural genomics, PSI 99.42
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.4
3olq_A319 Universal stress protein E; structural genomics, P 99.39
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.33
3fdx_A143 Putative filament protein / universal stress PROT; 98.24
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.2
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.16
3dlo_A155 Universal stress protein; unknown function, struct 98.15
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.13
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.11
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.11
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.08
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.08
3tnj_A150 Universal stress protein (USP); structural genomic 98.06
3fg9_A156 Protein of universal stress protein USPA family; A 98.05
3fdx_A143 Putative filament protein / universal stress PROT; 98.04
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.03
3dlo_A155 Universal stress protein; unknown function, struct 98.03
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.0
2z08_A137 Universal stress protein family; uncharacterized c 98.0
2z08_A137 Universal stress protein family; uncharacterized c 97.99
3tnj_A150 Universal stress protein (USP); structural genomic 97.99
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 97.99
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 97.93
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 97.91
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 97.89
3fg9_A156 Protein of universal stress protein USPA family; A 97.88
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 97.83
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 97.8
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.7
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.59
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.43
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 97.43
3ab8_A 268 Putative uncharacterized protein TTHA0350; tandem- 97.36
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 97.33
3mt0_A 290 Uncharacterized protein PA1789; structural genomic 97.31
3olq_A 319 Universal stress protein E; structural genomics, P 97.21
3loq_A294 Universal stress protein; structural genomics, PSI 97.14
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 94.54
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.90  E-value=7.1e-24  Score=230.12  Aligned_cols=302  Identities=11%  Similarity=0.121  Sum_probs=217.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHH----Hhcch--hHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhhhhhHHHHHH
Q 004016          111 AINVIECVGLIFMFFTLSARIDKGIV----KKSGK--LAIVIGVGAFIIPLIVSILTTLFIRDGLELDDELRSTLPMVAT  184 (779)
Q Consensus       111 ~l~~l~~lGl~~llF~~Gle~d~~~l----~~~~~--~~~~ia~~~~l~p~~~g~~~~~~l~~~~~~~~~~~~~~l~lg~  184 (779)
                      ....+.+-.+.++||.+|+|+|.+.+    ++.+|  .+...++.|+++|++++.    .+.. .      ...+.....
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~~-~------~~~~~~gw~  127 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFNY-A------DPITREGWA  127 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGCC-S------STTHHHHTS
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhc-C------ChhhhhhhH
Confidence            45567788899999999999999877    55544  478889999999998732    2221 1      133455556


Q ss_pred             HHhhhhHHHHHHHHHHcCc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 004016          185 LEATISFHVILANLTELKL-LNSEIGRLALSSSLLSSLIGWFAPTFYIYASENALVGITRRTVFLMNVSVIVMVIIIVFV  263 (779)
Q Consensus       185 ~ls~Ts~~vv~~iL~el~l-~~s~~g~l~ls~a~i~D~~~~ill~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v  263 (779)
                      +.+.|+.+....++..++. .++..++.+++.|++||+.+|+++++. ..   +  +.+   ..+ +...+++++..   
T Consensus       128 ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvf-yt---~--~~~---~~~-l~~~~~~~~~~---  194 (388)
T 1zcd_A          128 IPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALF-YT---N--DLS---MAS-LGVAAVAIAVL---  194 (388)
T ss_dssp             SSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHH-SC---C--CCC---HHH-HHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHH-Hc---C--Ccc---HHH-HHHHHHHHHHH---
Confidence            6777999999999999865 456677999999999999999999887 42   2  221   111 11111121111   


Q ss_pred             HHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHhhcCCCC----CchhHHHHHHHHHHHHh
Q 004016          264 VRPIIFWMMRKTPEGKPLKQDHLVALNVIVLVVALVGELTGQNSYLGPFILGITTPVTP----PMGSLLADKIQYFVWVA  339 (779)
Q Consensus       264 ~r~~~~~l~~~~~~~~~~~e~~~~~il~~~l~~~~~se~lg~~~~lGaflaGL~l~~~~----p~~~~l~~kl~~~~~~l  339 (779)
                           .++.|+.     +++...+.++ .+ ++.+.++..|+|+++|+|++|+++|..+    +..+++++++++++..+
T Consensus       195 -----~~l~r~~-----v~~~~~y~~l-gl-~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~  262 (388)
T 1zcd_A          195 -----AVLNLCG-----ARRTGVYILV-GV-VLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYL  262 (388)
T ss_dssp             -----HHHHHTT-----CCCTHHHHHH-HH-HHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHT
T ss_pred             -----HHHHHhc-----chhHHHHHHH-HH-HHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHH
Confidence                 1222221     1223334433 22 4457779999999999999999999853    34788999999999999


Q ss_pred             hHHHH-HHHhcccccccccchhhHHHHHHHHHHHHHhhHHH----HHHHHHhc------CCChHHHHHHHHHhhhhhhhH
Q 004016          340 FIPCF-IINTGRRVDLYSIQFNHFLAVEMVILIAGTVKTFA----IVIPCLYS------KIPFMDALALGLLLNCRGIYD  408 (779)
Q Consensus       340 flPlF-F~~~G~~~d~~~l~~~~~~~~~~iiv~~~~~K~~~----~~l~~~~~------~~~~~~~l~lg~~l~~kG~~~  408 (779)
                      ++|+| |+..|+++|...+....-.....+++..+++|++|    +++..|+.      +++|+|...+|++++.+++++
T Consensus       263 ilPlFaFanaGv~l~~~~~~~l~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftms  342 (388)
T 1zcd_A          263 ILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMS  342 (388)
T ss_dssp             HHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHH
T ss_pred             HHHHHHHHhcCeeecccchhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHH
Confidence            99999 99999999975332110011123344557899988    44444444      899999999999999999999


Q ss_pred             HHHHHhhhhcCC--CChhHHHHHHHHHHHHHHhHHHHHHHhh
Q 004016          409 IQVFTRAKQRLQ--ITDESFAIMVITAMFQSAIIIPLVKLVY  448 (779)
Q Consensus       409 l~~~~~~~~~~~--i~~~~f~~lv~~~ll~t~i~~plv~~l~  448 (779)
                      +++++.+++.+.  +.++.+..+++++++++.+++.++++.+
T Consensus       343 L~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          343 IFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             HHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             HHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998876  3567799999999998887777776544
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query779
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.41
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.39
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.28
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.09
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.0
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.0
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 97.99
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 97.89
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 97.8
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 97.65
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 97.16
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 96.59
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.41  E-value=8.1e-07  Score=82.57  Aligned_cols=140  Identities=15%  Similarity=0.102  Sum_probs=88.3

Q ss_pred             eEEEeecCCCChHHHHHHHHhcCCCCCCceEEEEEeeeccCCCCccccccccCCCC-CCCCCCc--------chhHHHHH
Q 004016          472 RILVCIPENDHVPTAINLLKASNPPQSHVGVYVMNLEEYIGRSMPVVIPHRLDKNP-SSSKPAK--------IDPLLHAF  542 (779)
Q Consensus       472 riLv~i~~~~~v~~li~L~~~~~~~~~p~~v~~lhlvel~~r~~~~~~~~~~~~~~-~~~~~~~--------~~~i~~af  542 (779)
                      |||+|+...+.....++.+..++.. ....++++|+++.................. .......        .++.-+.+
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la~~-~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFKTL-KAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKM   83 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTCCS-SCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHh-cCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            8999998888888899888887765 445899999998764432211111000000 0000000        01111222


Q ss_pred             HHHHHh-cCcceEEEEEEEeccCCChHHHHHHHHhhcCccEEEecccc-C--CChhhHHHHHHhhhcCCCceEEEec
Q 004016          543 FRYQQT-NKAYVSVQCFTAVAPYASMHDDICSMAFQKATSLIIFPFLK-T--EPTLTKKVINNVLSMSPCSIGLLYD  615 (779)
Q Consensus       543 ~~~~~~-~~~~v~v~~~t~vs~~~~m~~dI~~~A~e~~~~lIilp~h~-~--~~~~~~~~n~~vl~~apCsVgIlvd  615 (779)
                      +.+.+. ...++.++......   +..+.||+.|++.++|+|+||.|+ +  .+..+|++.++|++++||+|-|.-.
T Consensus        84 ~~~~~~~~~~gv~~~~~~~~G---~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~GS~a~~vl~~s~~pVlvV~~  157 (160)
T d1mjha_          84 ENIKKELEDVGFKVKDIIVVG---IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKR  157 (160)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEE---CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECC
T ss_pred             HHHHHHHHhcCCeEEEEEEec---cHHHHHhhhhhccccceEEeccCCCCcccccccCcHHHHHHhcCCCCEEEEcC
Confidence            222211 12356777665554   789999999999999999999987 2  3556799999999999999888743
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure