Citrus Sinensis ID: 004023

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------78
MSGDVVIEPTKEEEEAVSVQLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLAQQENQKKAELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
cccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcEEEccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHHcccccccccHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEHHHHHHHHHHHHHHEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc
ccccEEEcccccccccccHHHHccccccccccccccccHHHcccccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHcccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHEHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccHEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHEEEEHcccccHHHHHHHccccccEEcccEEEEEHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEcEEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
msgdvvieptkEEEEAVSVQLQGKklswqklgrndsldmesrtvsghygrdskaVKWSVILQLAFQSIGvvygdigtsplYVYASTftnginhiDDILGVLSLIFYTLTLIPLVKYVLIVLRandngdggtFALYSLICRYAkvglipseqaedcdvsnfqlelpsKRLKRASRLKYKLENSQFAKYFLLVATMLGtsmvigdgvltPCISVLSAvggikeasagmtqdKVVWVSVAIIVLLFMVQrfgtdkvgysfAPIICVWFSLIggigiynfikydpsvikainpkYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFyksiphslywPMFIVAVMAAIIASQAMISGTFSIVQQSislgcfprvkvvhtsakyegqvyipEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLykfdqggylpLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETkfcripglAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSikslpigkvpaeerflfrrveprelnVFRCVARygytdarneeepFERMLIEKLEEFIKEDLWLCQTTisnmeiaegdqvdelvdgetdqldeNSKLAQQENQKKAELEKQIETLDRAWRAGVVHLIGEsevvagkganigKRILIDYGYNFLKrnltqsgkvfdiphkrmlkvgmtyel
msgdvvieptkeeeeavsvqlqgkklswqklgrndsldmesrtvsghygrdskAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVsnfqlelpskrlKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEasagmtqdkVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKslpigkvpaeerflfrrveprelnvfrcvarygytdarneeepFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLAQQENQKKAELEKQIETLDRAWRAGVVHLIgesevvagkganigKRILIDYGYNFLKRNltqsgkvfdiphkrmlkvgmtyel
MSGDVVIEPTKEEEEAVSVQLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFivavmaaiiasqamisGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLAQQENQKKAELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
***********************************************YGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLEL*******ASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIA************************************IETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKV******
***********************************************************ILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDC**********************KLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDL****************************************************LDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
*********************QGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKL**********LEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
********************************RNDSLDMESRTVSG******KAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWL*****************************************AELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
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MSGDVVIEPTKEEEEAVSVQLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQxxxxxxxxxxxxxxxxxxxxxxxxxxxxWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query778 2.2.26 [Sep-21-2011]
Q9M7K4785 Potassium transporter 5 O yes no 0.965 0.956 0.536 0.0
Q5JK32781 Potassium transporter 5 O yes no 0.955 0.951 0.563 0.0
Q6H4M2742 Potassium transporter 19 yes no 0.929 0.974 0.522 0.0
Q6H4L9747 Potassium transporter 20 no no 0.939 0.978 0.513 0.0
Q6VVA6801 Potassium transporter 1 O no no 0.964 0.936 0.508 0.0
Q84MS4811 Potassium transporter 27 no no 0.958 0.919 0.474 0.0
Q84MS3811 Probable potassium transp no no 0.948 0.909 0.464 0.0
Q75G84799 Potassium transporter 21 no no 0.988 0.962 0.461 0.0
O80739827 Putative potassium transp no no 0.960 0.903 0.468 0.0
Q6H4R6877 Potassium transporter 23 no no 0.956 0.848 0.463 0.0
>sp|Q9M7K4|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1 Back     alignment and function desciption
 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/775 (53%), Positives = 559/775 (72%), Gaps = 24/775 (3%)

Query: 20  QLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSP 79
           +L  KK SW KL R DS  +E+     + GR S  + W   + LAFQS+GVVYGDIGTSP
Sbjct: 19  KLNEKKKSWGKLYRPDSFIIEAGQTPTNTGRRS-LMSWRTTMSLAFQSLGVVYGDIGTSP 77

Query: 80  LYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLIC 139
           LYVYASTFT+GIN  DD++GVLSLI YT+TL+ L+KYV IVL+ANDNG+GGTFALYSLIC
Sbjct: 78  LYVYASTFTDGINDKDDVVGVLSLIIYTITLVALLKYVFIVLQANDNGEGGTFALYSLIC 137

Query: 140 RYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSM 199
           RYAK+GLIP+++ ED ++SN+ LELP+ +L+RA  +K KLENS+FAK  L + T++GTSM
Sbjct: 138 RYAKMGLIPNQEPEDVELSNYTLELPTTQLRRAHMIKEKLENSKFAKIILFLVTIMGTSM 197

Query: 200 VIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAP 259
           VIGDG+LTP ISVLSAV GIK     + Q+ VV VSVAI+++LF  QRFGTDKVG+SFAP
Sbjct: 198 VIGDGILTPSISVLSAVSGIKS----LGQNTVVGVSVAILIVLFAFQRFGTDKVGFSFAP 253

Query: 260 IICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEA 319
           II VWF+ + GIG++N  K+D +V+KA+NP YI+ YF R  +  WISLGGV L ITGTEA
Sbjct: 254 IILVWFTFLIGIGLFNLFKHDITVLKALNPLYIIYYFRRTGRQGWISLGGVFLCITGTEA 313

Query: 320 LFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMF 379
           +FAD+GHF+V+++Q+S   V YPAL+  Y GQA++L KH+  VS TFY SIP  LYWP F
Sbjct: 314 MFADLGHFSVRAVQISFSCVAYPALVTIYCGQAAYLTKHTYNVSNTFYDSIPDPLYWPTF 373

Query: 380 IVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIAC 439
           +VAV A+IIASQAMISG FS++ QS+ +GCFPRVKVVHTSAKYEGQVYIPEINYLLM+AC
Sbjct: 374 VVAVAASIIASQAMISGAFSVISQSLRMGCFPRVKVVHTSAKYEGQVYIPEINYLLMLAC 433

Query: 440 VCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELG 499
           + VT+ FRTTEKIG+AYGIAVV VM +T+ ++ LIM++IWK+NI  +  +++V  S+E+ 
Sbjct: 434 IAVTLAFRTTEKIGHAYGIAVVTVMVITTLMVTLIMLVIWKTNIVWIAIFLVVFGSIEML 493

Query: 500 YLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKF 559
           YLSSV+YKF  GGYLPL    VLM +M IW  V+  KY +EL  KIS E   ++A     
Sbjct: 494 YLSSVMYKFTSGGYLPLTITVVLMAMMAIWQYVHVLKYRYELREKISRENAIQMATSPDV 553

Query: 560 CRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVE 619
            R+PG+ +FY+ELV GI P+F HY+ N+ ++HSV V +SIK+LP+ +V + ERF FR V 
Sbjct: 554 NRVPGIGLFYTELVNGITPLFSHYISNLSSVHSVFVLISIKTLPVNRVTSSERFFFRYVG 613

Query: 620 PRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVD 679
           P++  +FRCV RYGY +   E + FER  +  L+EFI  + ++        E+ E D+ +
Sbjct: 614 PKDSGMFRCVVRYGYKEDIEEPDEFERHFVYYLKEFIHHEHFMSG---GGGEVDETDKEE 670

Query: 680 E-----LVDGETDQLDENSKLAQQENQKKAEL-----------EKQIETLDRAWRAGVVH 723
           E      V   ++ +  + ++    +    ++           E Q E +++A   G+V+
Sbjct: 671 EPNAETTVVPSSNYVPSSGRIGSAHSSSSDKIRSGRVVQVQSVEDQTELVEKAREKGMVY 730

Query: 724 LIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778
           L+GE+E+ A K +++ K+ ++++ YNFLK+N  +  K   IP  ++LKVGMTYEL
Sbjct: 731 LMGETEITAEKESSLFKKFIVNHAYNFLKKNCREGDKALAIPRSKLLKVGMTYEL 785
High-affinity potassium transporter. Could also transport rubidium and cesium.
Arabidopsis thaliana (taxid: 3702)
>sp|Q5JK32|HAK5_ORYSJ Potassium transporter 5 OS=Oryza sativa subsp. japonica GN=HAK5 PE=2 SV=2 Back     alignment and function description
>sp|Q6H4M2|HAK19_ORYSJ Potassium transporter 19 OS=Oryza sativa subsp. japonica GN=HAK19 PE=2 SV=1 Back     alignment and function description
>sp|Q6H4L9|HAK20_ORYSJ Potassium transporter 20 OS=Oryza sativa subsp. japonica GN=HAK20 PE=2 SV=1 Back     alignment and function description
>sp|Q6VVA6|HAK1_ORYSJ Potassium transporter 1 OS=Oryza sativa subsp. japonica GN=HAK1 PE=1 SV=2 Back     alignment and function description
>sp|Q84MS4|HAK27_ORYSJ Potassium transporter 27 OS=Oryza sativa subsp. japonica GN=HAK27 PE=2 SV=1 Back     alignment and function description
>sp|Q84MS3|HAK16_ORYSJ Probable potassium transporter 16 OS=Oryza sativa subsp. japonica GN=HAK16 PE=2 SV=1 Back     alignment and function description
>sp|Q75G84|HAK21_ORYSJ Potassium transporter 21 OS=Oryza sativa subsp. japonica GN=HAK21 PE=2 SV=1 Back     alignment and function description
>sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2 Back     alignment and function description
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query778
255575894780 Potassium transporter, putative [Ricinus 0.982 0.979 0.782 0.0
224128530774 predicted protein [Populus trichocarpa] 0.989 0.994 0.778 0.0
225436717773 PREDICTED: potassium transporter 5 [Viti 0.991 0.997 0.760 0.0
225436721773 PREDICTED: potassium transporter 5 [Viti 0.991 0.997 0.75 0.0
357511213773 Potassium transporter [Medicago truncatu 0.966 0.972 0.730 0.0
225436719773 PREDICTED: potassium transporter 5 [Viti 0.991 0.997 0.737 0.0
225436723770 PREDICTED: potassium transporter 5-like 0.982 0.992 0.730 0.0
296086594728 unnamed protein product [Vitis vinifera] 0.934 0.998 0.740 0.0
296086596751 unnamed protein product [Vitis vinifera] 0.962 0.997 0.742 0.0
296086595734 unnamed protein product [Vitis vinifera] 0.942 0.998 0.725 0.0
>gi|255575894|ref|XP_002528844.1| Potassium transporter, putative [Ricinus communis] gi|223531695|gb|EEF33518.1| Potassium transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/769 (78%), Positives = 678/769 (88%), Gaps = 5/769 (0%)

Query: 12  EEEEAVSVQLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSK-AVKWSVILQLAFQSIGV 70
           E  +  S  L GKKLS  KL R+DSL++ESRT  GH    SK  V WSVILQLAFQSIG+
Sbjct: 15  ETRDEFSKSLNGKKLSRHKLRRSDSLEIESRTFHGHRVYGSKDGVSWSVILQLAFQSIGI 74

Query: 71  VYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGG 130
           VYGDIGTSPLYVYASTFT GI H DD+LGVLSLIFYTLTLIPL+KYVLIVLRANDNGDGG
Sbjct: 75  VYGDIGTSPLYVYASTFTEGIKHNDDVLGVLSLIFYTLTLIPLIKYVLIVLRANDNGDGG 134

Query: 131 TFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLL 190
           TFALYSL+CRYAKVGLIPS+Q+ED DVSNFQLELPS+RL RAS+LK KLENS+FAK+FLL
Sbjct: 135 TFALYSLVCRYAKVGLIPSQQSEDLDVSNFQLELPSRRLSRASKLKSKLENSKFAKFFLL 194

Query: 191 VATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGT 250
            ATMLGTSMVIGDGVLTPCISVLSAVGGIK+A+  MT D +VW+SV I++LLFMVQRFGT
Sbjct: 195 FATMLGTSMVIGDGVLTPCISVLSAVGGIKQATTKMTDDMIVWISVVILILLFMVQRFGT 254

Query: 251 DKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGV 310
           DKVGYSFAPIICVWF++I GIG++NF KYDP+VIKAINPKYIVDYF RNK  AWISLGG+
Sbjct: 255 DKVGYSFAPIICVWFAMIAGIGLFNFFKYDPAVIKAINPKYIVDYFRRNKDQAWISLGGI 314

Query: 311 VLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSI 370
           VLAITGTEALFADVGHFTV SIQ+SMCTVTYPALI AY GQA+FLRKH++LV ETFY+SI
Sbjct: 315 VLAITGTEALFADVGHFTVPSIQISMCTVTYPALICAYTGQAAFLRKHNDLVLETFYESI 374

Query: 371 PHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPE 430
           P  LYWPMF VAVMA+IIASQAMISGTFSI+QQS+SLGCFPRVK+VHTSAKYEGQVYIPE
Sbjct: 375 PKPLYWPMFGVAVMASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVYIPE 434

Query: 431 INYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYV 490
           INYLLM+ACV VT+GFR+T  IGNAYGIAVVFVMTLTS  LVLIM+MIWK+NI  VIAYV
Sbjct: 435 INYLLMLACVGVTLGFRSTTNIGNAYGIAVVFVMTLTSAFLVLIMLMIWKTNILYVIAYV 494

Query: 491 LVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERV 550
           L I  VEL YLSSVLYKFDQGGYLPLAFAAVLMTIMY+WN+VYRR+YY+EL++KISP+++
Sbjct: 495 LTIGVVELVYLSSVLYKFDQGGYLPLAFAAVLMTIMYVWNDVYRRRYYYELDNKISPDKL 554

Query: 551 KEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAE 610
           KE+AAET F R+PGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIK LPIGKVP E
Sbjct: 555 KEVAAETNFSRLPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKWLPIGKVPVE 614

Query: 611 ERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNM 670
           ERFLFRRVEP+ELNVFRCVARYGY D RNE+EPFER+LIEKL++FI +D WL Q  +S  
Sbjct: 615 ERFLFRRVEPKELNVFRCVARYGYADVRNEQEPFERILIEKLKQFIIDDFWLSQAIVSRG 674

Query: 671 EIAEGDQVDELVDGETDQLDENSKLAQQENQK-KAELEKQIETLDRAWRAGVVHLIGESE 729
              E  +V EL +G+ ++ DEN  + Q+  +K + +++ QIE +D+A RAGVVHL+GE+E
Sbjct: 675 VTDE--KVQELDEGQNNE-DENGSINQENEEKLQQDVDNQIEIIDKASRAGVVHLVGENE 731

Query: 730 VVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778
           V+AG+GANIGKRILIDY Y FLKRNL QS KVFDIP KRMLKVGMTYEL
Sbjct: 732 VIAGRGANIGKRILIDYAYTFLKRNLRQSEKVFDIPQKRMLKVGMTYEL 780

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128530|ref|XP_002320355.1| predicted protein [Populus trichocarpa] gi|222861128|gb|EEE98670.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225436717|ref|XP_002264560.1| PREDICTED: potassium transporter 5 [Vitis vinifera] gi|93115179|gb|ABE98259.1| KUP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225436721|ref|XP_002264655.1| PREDICTED: potassium transporter 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357511213|ref|XP_003625895.1| Potassium transporter [Medicago truncatula] gi|355500910|gb|AES82113.1| Potassium transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|225436719|ref|XP_002264737.1| PREDICTED: potassium transporter 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225436723|ref|XP_002265365.1| PREDICTED: potassium transporter 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086594|emb|CBI32229.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086596|emb|CBI32231.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086595|emb|CBI32230.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query778
TAIR|locus:2142110785 HAK5 "high affinity K+ transpo 0.969 0.960 0.523 2.6e-214
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.876 0.824 0.477 2e-184
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.800 0.782 0.477 9.4e-176
TAIR|locus:2119812823 KUP9 "AT4G19960" [Arabidopsis 0.856 0.809 0.444 1.7e-174
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.863 0.847 0.449 2.3e-172
TAIR|locus:2184722858 KUP7 "K+ uptake permease 7" [A 0.805 0.730 0.462 8.8e-171
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.803 0.730 0.454 1.5e-166
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.784 0.768 0.460 1.5e-164
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.777 0.774 0.466 1.5e-162
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.803 0.792 0.431 3.7e-162
TAIR|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2071 (734.1 bits), Expect = 2.6e-214, P = 2.6e-214
 Identities = 404/772 (52%), Positives = 543/772 (70%)

Query:    20 QLQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSP 79
             +L  KK SW KL R DS  +E+     + GR S  + W   + LAFQS+GVVYGDIGTSP
Sbjct:    19 KLNEKKKSWGKLYRPDSFIIEAGQTPTNTGRRS-LMSWRTTMSLAFQSLGVVYGDIGTSP 77

Query:    80 LYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLIC 139
             LYVYASTFT+GIN  DD++GVLSLI YT+TL+ L+KYV IVL+ANDNG+GGTFALYSLIC
Sbjct:    78 LYVYASTFTDGINDKDDVVGVLSLIIYTITLVALLKYVFIVLQANDNGEGGTFALYSLIC 137

Query:   140 RYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSM 199
             RYAK+GLIP+++ ED ++SN+ LELP+ +L+RA  +K KLENS+FAK  L + T++GTSM
Sbjct:   138 RYAKMGLIPNQEPEDVELSNYTLELPTTQLRRAHMIKEKLENSKFAKIILFLVTIMGTSM 197

Query:   200 VIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAP 259
             VIGDG+LTP ISVLSAV GIK  S G  Q+ VV VSVAI+++LF  QRFGTDKVG+SFAP
Sbjct:   198 VIGDGILTPSISVLSAVSGIK--SLG--QNTVVGVSVAILIVLFAFQRFGTDKVGFSFAP 253

Query:   260 IICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEA 319
             II VWF+ + GIG++N  K+D +V+KA+NP YI+ YF R  +  WISLGGV L ITGTEA
Sbjct:   254 IILVWFTFLIGIGLFNLFKHDITVLKALNPLYIIYYFRRTGRQGWISLGGVFLCITGTEA 313

Query:   320 LFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMF 379
             +FAD+GHF+V+++Q+S   V YPAL+  Y GQA++L KH+  VS TFY SIP  LYWP F
Sbjct:   314 MFADLGHFSVRAVQISFSCVAYPALVTIYCGQAAYLTKHTYNVSNTFYDSIPDPLYWPTF 373

Query:   380 XXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIAC 439
                             G FS++ QS+ +GCFPRVKVVHTSAKYEGQVYIPEINYLLM+AC
Sbjct:   374 VVAVAASIIASQAMISGAFSVISQSLRMGCFPRVKVVHTSAKYEGQVYIPEINYLLMLAC 433

Query:   440 VCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELG 499
             + VT+ FRTTEKIG+AYGIAVV VM +T+ ++ LIM++IWK+NI  +  +++V  S+E+ 
Sbjct:   434 IAVTLAFRTTEKIGHAYGIAVVTVMVITTLMVTLIMLVIWKTNIVWIAIFLVVFGSIEML 493

Query:   500 YLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKF 559
             YLSSV+YKF  GGYLPL    VLM +M IW  V+  KY +EL  KIS E   ++A     
Sbjct:   494 YLSSVMYKFTSGGYLPLTITVVLMAMMAIWQYVHVLKYRYELREKISRENAIQMATSPDV 553

Query:   560 CRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVE 619
              R+PG+ +FY+ELV GI P+F HY+ N+ ++HSV V +SIK+LP+ +V + ERF FR V 
Sbjct:   554 NRVPGIGLFYTELVNGITPLFSHYISNLSSVHSVFVLISIKTLPVNRVTSSERFFFRYVG 613

Query:   620 PRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQT--TISNMEIAEGDQ 677
             P++  +FRCV RYGY +   E + FER  +  L+EFI  + ++      +   +  E   
Sbjct:   614 PKDSGMFRCVVRYGYKEDIEEPDEFERHFVYYLKEFIHHEHFMSGGGGEVDETDKEEEPN 673

Query:   678 VDELVDGETDQLDENSKL--AQQENQKKAE---------LEKQIETLDRAWRAGVVHLIG 726
              +  V   ++ +  + ++  A   +  K           +E Q E +++A   G+V+L+G
Sbjct:   674 AETTVVPSSNYVPSSGRIGSAHSSSSDKIRSGRVVQVQSVEDQTELVEKAREKGMVYLMG 733

Query:   727 ESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778
             E+E+ A K +++ K+ ++++ YNFLK+N  +  K   IP  ++LKVGMTYEL
Sbjct:   734 ETEITAEKESSLFKKFIVNHAYNFLKKNCREGDKALAIPRSKLLKVGMTYEL 785
GO:0005886 "plasma membrane" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS;IMP
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0009674 "potassium:sodium symporter activity" evidence=IMP
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5JK32HAK5_ORYSJNo assigned EC number0.56340.95500.9513yesno
Q6H4M2HAK19_ORYSJNo assigned EC number0.52260.92930.9743yesno
Q9M7K4POT5_ARATHNo assigned EC number0.53670.96520.9566yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_XIV000726
hypothetical protein (774 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query778
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-159
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 1e-121
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information 
 Score =  834 bits (2155), Expect = 0.0
 Identities = 363/767 (47%), Positives = 526/767 (68%), Gaps = 27/767 (3%)

Query: 29  QKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFT 88
           Q++ R   +D +S  V   Y   S      VI+ LA+QS+GVVYGD+GTSPLYV+ STF 
Sbjct: 19  QRITRPLGVDADS--VRSMY--FSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFA 74

Query: 89  N-GINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLI 147
           N G+ + DDI+G LSLI YTLT+IPL+KYV IVLRANDNG+GG+FALYSL+CRY  + L+
Sbjct: 75  NVGVKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLL 134

Query: 148 PSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLT 207
           P++   D +++ + ++     + R +R++ KLENS+  +  LL+  +LGT MVIGDG+LT
Sbjct: 135 PNQHPTDVELTTYVVD----NMNRKTRIQRKLENSRVWQNVLLLIVLLGTCMVIGDGILT 190

Query: 208 PCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSL 267
           P ISVLSAV GIK AS+G+  + V  +S  I+V+LF +QRFGT KV + FAPI   WF  
Sbjct: 191 PSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFS 250

Query: 268 IGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHF 327
           +  IG YN IK+D SV  A NP YIV +F RN +  W SLGG+VL +TGTEA+FAD+GHF
Sbjct: 251 LALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHF 310

Query: 328 TVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAI 387
           TV+S+Q++  ++ YP L+L Y+GQA++L KH E V++ FY+S+P  +YWP+F++A  +A+
Sbjct: 311 TVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAM 370

Query: 388 IASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFR 447
           IASQAMIS TFSIV+Q+++LGCFPRVK+VHTS K  GQVYIPEIN++LM+ C+ +T GFR
Sbjct: 371 IASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFR 430

Query: 448 TTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYK 507
            T++IGNAYGIAVV VM +T+ L+ L+MI+IW+ +I L + +  V   +E  Y S+VL+K
Sbjct: 431 DTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFK 490

Query: 508 FDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAM 567
             QGG++PL  AAV  T+MY W+   R++Y +E++HK+S   +  +       R+PG+ +
Sbjct: 491 VTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGL 550

Query: 568 FYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFR 627
            Y++L  G+PP+F H++ N+PA+HS +VFV IK LP+  VP +ERFL RR+ PR  +++R
Sbjct: 551 MYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYR 610

Query: 628 CVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNM--------EIAEGDQVD 679
           C ARYGYTD   +++ FE++LI  LE FI+ + +  Q+ + +M         + EG+ V 
Sbjct: 611 CAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGEGNSVG 670

Query: 680 ELVDGETDQLD----------ENSKLAQQENQKKAELEKQIETLDRAWRAGVVHLIGESE 729
             +  + DQ D            S      +   ++ + ++  L++   AGVV+++G ++
Sbjct: 671 SGLFTQYDQSDINFATSQEWKRPSSQEDSVSGHSSDTQDEVAFLNKCKEAGVVYILGNND 730

Query: 730 VVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTY 776
           V A K +   K+++I+Y Y FL+R    S  V +IPH+ +LKVGM Y
Sbjct: 731 VKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVY 777

Length = 779
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 778
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00149779 potassium transporter; Provisional 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 92.59
COG0531466 PotE Amino acid transporters [Amino acid transport 90.23
TIGR00909429 2A0306 amino acid transporter. 88.71
PRK10655438 potE putrescine transporter; Provisional 85.64
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 83.89
TIGR00907482 2A0304 amino acid permease (GABA permease). 82.62
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.1e-258  Score=2177.20  Aligned_cols=758  Identities=46%  Similarity=0.841  Sum_probs=705.4

Q ss_pred             cccccccccccCCCCccccccccccCCCCCCcccccHHHHHHHHhhhcceeecccCcchhHHHhhhcCC-CCCCcCceeh
Q 004023           21 LQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTN-GINHIDDILG   99 (778)
Q Consensus        21 ~~~~~~~~~~~~~~ds~~~~~~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~f~~-~~~~~~dvlG   99 (778)
                      ...++++|+.++|+||||.|+++++++++|+.|+.++|+++.|||||||||||||||||||||+++|++ +++++|||+|
T Consensus        63 ~~~~~~~~~~~~~~d~~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlG  142 (852)
T PLN00151         63 GNMRRRLIRTPPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLG  142 (852)
T ss_pred             cchhhhHhhCCCccchhhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheee
Confidence            345788999999999999999999888877655577888899999999999999999999999999987 4569999999


Q ss_pred             hhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHHhhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHhh
Q 004023          100 VLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKL  179 (778)
Q Consensus       100 vLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~l  179 (778)
                      +||||||||||||++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|+++.+|+.|+|++|
T Consensus       143 vLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~l  222 (852)
T PLN00151        143 ALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERL  222 (852)
T ss_pred             ehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhcccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhh
Q 004023          180 ENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAP  259 (778)
Q Consensus       180 e~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~P  259 (778)
                      |+|+++|.++++++++||||+||||+|||||||||||||||++.|++++++||+|||+||++||++|||||+|||++|||
T Consensus       223 E~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgP  302 (852)
T PLN00151        223 ETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGP  302 (852)
T ss_pred             hhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhh
Q 004023          260 IICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTV  339 (778)
Q Consensus       260 ImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~  339 (778)
                      ||++||++||++|+|||++|||+||+||||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++
T Consensus       303 ImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~  382 (852)
T PLN00151        303 ALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCL  382 (852)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccchhhhccCCccccccccccccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecC
Q 004023          340 TYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTS  419 (778)
Q Consensus       340 v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS  419 (778)
                      |||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||
T Consensus       383 V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS  462 (852)
T PLN00151        383 VLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTS  462 (852)
T ss_pred             HHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 004023          420 AKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELG  499 (778)
Q Consensus       420 ~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~  499 (778)
                      ++++||||||+|||+||++|++||++||||++||||||+||++||++||+|+++||+++||||++++++|+++|+++|++
T Consensus       463 ~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~  542 (852)
T PLN00151        463 RKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELV  542 (852)
T ss_pred             CccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchh
Q 004023          500 YLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPI  579 (778)
Q Consensus       500 f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~  579 (778)
                      |||||+.||+||||+||++|++++++|++||||++++|++|.+|++|++++.++.++.+++||||+|+|||++++|+|++
T Consensus       543 f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~  622 (852)
T PLN00151        543 FFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAI  622 (852)
T ss_pred             HHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999988999999999999999999999


Q ss_pred             hHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-ChhhHHHHHHHHHHHHHHh
Q 004023          580 FKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARN-EEEPFERMLIEKLEEFIKE  658 (778)
Q Consensus       580 f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~~~~~yRcv~RYGY~D~~~-~~~~Fe~~l~~~l~~fi~~  658 (778)
                      |.||++|+|++||++||||||++|+|+||++|||+++|++||++++|||++||||||.++ +++|||+.|+|+|++|||.
T Consensus       623 f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~  702 (852)
T PLN00151        623 FGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRR  702 (852)
T ss_pred             HHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999987 7899999999999999999


Q ss_pred             hhhcccccccccccc-ccC--cccc---cccC---C---------ccccccch----------hhh-h-hhhhhhHHHHH
Q 004023          659 DLWLCQTTISNMEIA-EGD--QVDE---LVDG---E---------TDQLDENS----------KLA-Q-QENQKKAELEK  708 (778)
Q Consensus       659 e~~~~~~~~~~~~~~-~~~--~~~~---~~~~---~---------~~~~~~~~----------~~~-~-~~~~~~~~~~~  708 (778)
                      |+.....+.+.+.+. ++.  ....   .+..   .         .++..+..          +.+ + ...+.+++++|
T Consensus       703 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  782 (852)
T PLN00151        703 EAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEY  782 (852)
T ss_pred             hhhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHH
Confidence            863211000000000 000  0000   0000   0         00000000          000 0 11122467899


Q ss_pred             HHHHHHHHHhcCcEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023          709 QIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL  778 (778)
Q Consensus       709 e~~~l~~a~~~gVvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei  778 (778)
                      |+++|++|+|+||+|++||++|+||++|+|+||+++||+|+|||||||++.+.|+|||+|++||||+|+|
T Consensus       783 El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        783 ELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             HHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999996

>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query778
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.3 bits (153), Expect = 2e-10
 Identities = 95/633 (15%), Positives = 184/633 (29%), Gaps = 207/633 (32%)

Query: 72  YGDIGTSPLYVYASTFTNGI--NHIDDIL-GVLS------------------LIFYTLTL 110
           Y DI    L V+   F +      + D+   +LS                   +F+TL  
Sbjct: 18  YKDI----LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73

Query: 111 IP--LVK-YVLIVLRANDNGDGGTFALYS-LICRYAKVGLIPS---EQAEDC------DV 157
               +V+ +V  VLR N          Y  L+         PS       +       D 
Sbjct: 74  KQEEMVQKFVEEVLRIN----------YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 158 SNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVG 217
             F  +    RL+   +L+  L   + AK  +L+  +LG     G   +   + V  +  
Sbjct: 124 QVFA-KYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLG----SGKTWVA--LDVCLSY- 174

Query: 218 GIKEASAGMTQDKVVWVSVA----IIVLLFMVQRF-------GTDKVGYSFAPII----- 261
            ++         K+ W+++        +L M+Q+         T +  +S    +     
Sbjct: 175 KVQCKMDF----KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 262 ---------------C------VWFSLIGGIGIYNFIKYDPSVIKAINP--KYIVDYFTR 298
                          C      V                +     A N   K ++   TR
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQ---------------NAKAWNAFNLSCKILLT--TR 273

Query: 299 NKKDA---------WISLGGVVLAITGTEA--LFADVGHFTVQSIQLSMCTVTYP---AL 344
            K+            ISL    + +T  E   L         Q +   + T   P   ++
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-PRRLSI 332

Query: 345 ILAYMGQASFLR---------KHSEL--VSETFYKSIPH-------SLYWPMFI----VA 382
           I      A  +R         KH     ++     S+          ++  + +      
Sbjct: 333 I------AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 383 VMAAIIAS--QAMISG-TFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIAC 439
           +   +++     +I      +V +        +          E  + IP I YL +   
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK-------QPKESTISIPSI-YLEL--- 435

Query: 440 VCVTVGFRTT--EKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSN-IFLVIAYVLVIMS- 495
             V +         I + Y I   F    +  L+       +     +  I + L  +  
Sbjct: 436 -KVKLENEYALHRSIVDHYNIPKTF---DSDDLIPP-----YLDQYFYSHIGHHLKNIEH 486

Query: 496 VELGYLSSVLY--------KFDQGGYLPLAFAAVLMTIM-------YIWNN--VYRRKYY 538
            E   L  +++        K         A  ++L T+        YI +N   Y R   
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546

Query: 539 FELEHKISPERVKEIAAETKFCRIPGLAMFYSE 571
             +   +   +++E    +K+  +  +A+   +
Sbjct: 547 -AILDFL--PKIEENLICSKYTDLLRIALMAED 576

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query778
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 96.81
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 96.79
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 96.03
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
Probab=96.81  E-value=0.0048  Score=66.40  Aligned_cols=105  Identities=13%  Similarity=0.189  Sum_probs=56.2

Q ss_pred             cccchhhhhhhhcccccccCCCCCC-eeehhHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhccccC
Q 004023          205 VLTPCISVLSAVGGIKEASAGMTQD-KVVWVSVAIIVLLFMVQRFGTDKVGY---SFAPIICVWFSLIGGIGIYNFIKYD  280 (778)
Q Consensus       205 vlTPAISVLSAVeGl~v~~p~l~~~-~Vv~is~~ILv~LF~iQ~~GT~kVg~---~F~PImllWF~~i~~iGiyni~~~~  280 (778)
                      +++.|....+..+-++...|...++ ....+++++++++..+..+|+...++   .+..+.++=++.+.+.|+...   +
T Consensus        98 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~---~  174 (444)
T 3gia_A           98 VISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITI---H  174 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---C
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C
Confidence            3455555555444444333332211 23457788888888899999876665   444444444444455555543   3


Q ss_pred             cceeee-cChHHHHHHHhhcChh-HHHhhhhhhhhhccccccc
Q 004023          281 PSVIKA-INPKYIVDYFTRNKKD-AWISLGGVVLAITGTEALF  321 (778)
Q Consensus       281 p~Vl~A-~nP~y~~~ff~~~g~~-~~~~LG~v~L~iTG~EAlf  321 (778)
                      |+-+.. ++|         ++.. -+..+..++.+.+|-|+.-
T Consensus       175 ~~~~~~~~~~---------~g~~~~~~~~~~~~~a~~G~e~~~  208 (444)
T 3gia_A          175 PSYVIPDLAP---------SAVSGMIFASAIFFLSYMGFGVIT  208 (444)
T ss_dssp             GGGTSCCCSH---------HHHHHHHHHHHHGGGGGTHHHHHH
T ss_pred             hhhcCCCCCC---------cchHHHHHHHHHHHHHHHhHHHHH
Confidence            443221 222         2222 2334555678889999753
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00