Citrus Sinensis ID: 004048
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 776 | 2.2.26 [Sep-21-2011] | |||||||
| Q16W06 | 635 | Bifunctional lysine-speci | N/A | no | 0.286 | 0.349 | 0.282 | 3e-17 | |
| B4GUZ2 | 687 | Bifunctional lysine-speci | N/A | no | 0.121 | 0.136 | 0.444 | 8e-17 | |
| Q8CD15 | 465 | Bifunctional lysine-speci | yes | no | 0.140 | 0.234 | 0.435 | 8e-17 | |
| B5DUH6 | 946 | Bifunctional lysine-speci | no | no | 0.121 | 0.099 | 0.444 | 1e-16 | |
| Q8CFC1 | 465 | Bifunctional lysine-speci | yes | no | 0.140 | 0.234 | 0.435 | 4e-16 | |
| Q5R673 | 465 | Bifunctional lysine-speci | yes | no | 0.157 | 0.262 | 0.408 | 6e-16 | |
| Q8IUF8 | 465 | Bifunctional lysine-speci | yes | no | 0.140 | 0.234 | 0.427 | 7e-16 | |
| B4L6Q5 | 888 | Bifunctional lysine-speci | N/A | no | 0.128 | 0.112 | 0.378 | 1e-15 | |
| Q5EA24 | 462 | Bifunctional lysine-speci | yes | no | 0.140 | 0.235 | 0.427 | 1e-15 | |
| B3NU20 | 657 | Bifunctional lysine-speci | N/A | no | 0.136 | 0.161 | 0.396 | 1e-15 |
| >sp|Q16W06|NO66_AEDAE Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 OS=Aedes aegypti GN=AAEL009382 PE=3 SV=1 | Back alignment and function desciption |
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Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 123/294 (41%), Gaps = 72/294 (24%)
Query: 278 TISKGRIERSIFSLNEGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQES 337
+I GR E+ + ++ E+F++NYWE P L++R S+ L S+
Sbjct: 199 SIVVGR-EKFAWVIHPTPVEDFMINYWEKKPLLIQRKN----------PSYYSNLLSRAK 247
Query: 338 VCSFLSCIFQRHISCLPIASDELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVH 397
+ L Q +I + +D+ S+ R + D RVL D S
Sbjct: 248 IDEMLR---QNNIEY----TKNIDVTSYREGQRE------THNPDGRVLPPDMWS----- 289
Query: 398 FFPRISDSFDVKDPYLIYANDISKCEEAYKEG-YTIALRGMEFRFECLANIADGLASLFG 456
F S + +P + Y G Y + ++ EF F C+
Sbjct: 290 -FYEEGCSIRMLNP------------QTYLPGVYEMNVKLQEF-FHCM------------ 323
Query: 457 QPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFA--QPSVQLPRLYNPCDIV 514
GAN YLTPPNSQG A HYDD FV Q+ G K WK+++ +P+ L R+ +P
Sbjct: 324 ---TGANFYLTPPNSQGFAPHYDDIEAFVLQVEGRKHWKLYSPREPAEMLARVSSP---- 376
Query: 515 NGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGV 568
E + +L GD+LY PRG H+A T SLH+T+ V
Sbjct: 377 -NFTQEEIGTPILEVVLEPGDLLYFPRGIIHQASTVP------GHHSLHVTMSV 423
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Histone demethylase that specifically demethylates 'Lys-4' (H3K4me) and 'Lys-36' (H3K36me) of histone H3, thereby playing a central role in histone code. Aedes aegypti (taxid: 7159) EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 2EC: 7 |
| >sp|B4GUZ2|NO66_DROPE Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 OS=Drosophila persimilis GN=GL12933 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8CD15|MINA_MOUSE Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA OS=Mus musculus GN=Mina PE=1 SV=2 | Back alignment and function description |
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| >sp|B5DUH6|NO66_DROPS Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 OS=Drosophila pseudoobscura pseudoobscura GN=GA27866 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8CFC1|MINA_RAT Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA OS=Rattus norvegicus GN=Mina PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5R673|MINA_PONAB Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA OS=Pongo abelii GN=MINA PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8IUF8|MINA_HUMAN Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA OS=Homo sapiens GN=MINA PE=1 SV=1 | Back alignment and function description |
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| >sp|B4L6Q5|NO66_DROMO Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 OS=Drosophila mojavensis GN=GI16410 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q5EA24|MINA_BOVIN Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA OS=Bos taurus GN=MINA PE=2 SV=1 | Back alignment and function description |
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| >sp|B3NU20|NO66_DROER Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 OS=Drosophila erecta GN=GG18702 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 776 | ||||||
| 297735434 | 770 | unnamed protein product [Vitis vinifera] | 0.972 | 0.980 | 0.554 | 0.0 | |
| 224144250 | 764 | predicted protein [Populus trichocarpa] | 0.936 | 0.951 | 0.560 | 0.0 | |
| 359485116 | 564 | PREDICTED: uncharacterized protein LOC10 | 0.721 | 0.992 | 0.595 | 0.0 | |
| 357479435 | 784 | Lysine-specific demethylase NO66 [Medica | 0.895 | 0.886 | 0.502 | 0.0 | |
| 147783372 | 590 | hypothetical protein VITISV_016492 [Viti | 0.734 | 0.966 | 0.569 | 1e-170 | |
| 449457281 | 541 | PREDICTED: uncharacterized protein LOC10 | 0.693 | 0.994 | 0.487 | 1e-145 | |
| 116310856 | 774 | OSIGBa0132E09-OSIGBa0108L24.12 [Oryza sa | 0.944 | 0.947 | 0.367 | 1e-129 | |
| 19387273 | 774 | unknown [Oryza sativa Japonica Group] gi | 0.942 | 0.944 | 0.366 | 1e-127 | |
| 218195745 | 769 | hypothetical protein OsI_17757 [Oryza sa | 0.943 | 0.951 | 0.367 | 1e-124 | |
| 222629703 | 769 | hypothetical protein OsJ_16482 [Oryza sa | 0.940 | 0.949 | 0.366 | 1e-123 |
| >gi|297735434|emb|CBI17874.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/786 (55%), Positives = 556/786 (70%), Gaps = 31/786 (3%)
Query: 4 MKKMGKKKKKRKQKQDN---------TNSIFAILVAALSNSNNNYSEFIIKKCLNRLRLS 54
M+ G+KK++ ++ + N N+IFA+++AA+ NSN YSE +IK+CLN L LS
Sbjct: 1 MENRGRKKRRLQRTKSNREWCSSSLDANTIFALMLAAICNSNEPYSESVIKRCLNSLHLS 60
Query: 55 LLSQSQPTLPIPILSLLPVLLNSKCS-GGIAGLSAEIVGAASLLSLETNEQIAADAEVVR 113
L+ SQ LL L+ C I S EI GAAS+ S E NEQIA D E+V+
Sbjct: 61 LIPNSQNA---AFAYLLIFFLDFPCRCDEIVSRSTEIAGAASIFSFEMNEQIALDGEIVK 117
Query: 114 GLVSLLRNSEKRVLVAAANAVLDLSTTSVGRQKLLESSALEALLLIFLQVHRSST-LVSL 172
GL+ + S K V VAA NAVLDLSTTS+GR++LLE SALE L+ +LQV SS LVS+
Sbjct: 118 GLILAVGASNKMVSVAACNAVLDLSTTSIGRERLLEFSALEHLMFKYLQVPESSKRLVSI 177
Query: 173 CAGENGNEASLCIACEEDEFLVLLLDAAIVLINSCDIEQLLRIPRKLYESLFVFLKELWI 232
C+ + G L I +ED+ +VLLL+AAI LIN+ DI+QL +PRKL E+ V+LKELW+
Sbjct: 178 CSLDKGGNICLRIGVKEDDLVVLLLNAAITLINTYDIDQLENMPRKLSEAFSVYLKELWV 237
Query: 233 KVRDQLLSGNIMRSNREKHFCSSKITVNSLAESIFRLSLNADQLTT-ISKGRIERSIFSL 291
KV +Q+L N ++ +++HF S I N+LAESIFRLS+NA LTT +++SIF
Sbjct: 238 KVHNQMLLRNTVKFGQDEHFNLSSIRTNNLAESIFRLSINAGHLTTPFPFEVVKKSIFGT 297
Query: 292 NEGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHIS 351
E FENFI+N+WEVSP LVR + L E +D+F+SF+Q L+ +++V SF+ + Q +S
Sbjct: 298 RESSFENFILNHWEVSPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQGLVS 357
Query: 352 CLPIASDELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDP 411
CLPI SDEL+IL+FL +R++LGC ++Y QDIRVL+T K+E P
Sbjct: 358 CLPIDSDELNILNFLKTVRNELGCLIIYGQDIRVLRTMGHLKEEA--------------P 403
Query: 412 YLIYANDISKCEEAYKEGYTIALRGMEFRFECLANIADGLASLFGQPSVGANMYLTPPNS 471
+ +Y +DI KCE+AY +GYTIALRGMEFRFE +A IADGLASLFGQPSVG N+YLTPP+S
Sbjct: 404 HFLYIDDILKCEDAYNKGYTIALRGMEFRFESIAAIADGLASLFGQPSVGVNLYLTPPDS 463
Query: 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLL 531
QGLA HYDDHCVFVCQLFGTKQW I +QP V LPRLY P D ++ + +SMA QFLL
Sbjct: 464 QGLARHYDDHCVFVCQLFGTKQWTIVSQPIVSLPRLYEPLDSLHSSKIGNSMAGRTQFLL 523
Query: 532 REGDILYIPRGFSHEACT--EDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQ 589
REGDILYIPRGF HEACT E G FSLHLTL +EVE PFEWEGFAHVAL CWNQ
Sbjct: 524 REGDILYIPRGFPHEACTVAESGGPDETTGFSLHLTLAIEVEPPFEWEGFAHVALHCWNQ 583
Query: 590 AQKTHHHASIESFSGILNLMSVNLLHLLIGLFGHSDPTFRKACLVGAVSRPSDTKDWFYL 649
+ K+ H+ S++ S IL++MSVNLLH+ I L G SDPTFRKACLV A++ PSD+K W L
Sbjct: 584 SSKSIHYTSVDPLSEILSVMSVNLLHIAIRLIGDSDPTFRKACLVAAITLPSDSKCWLGL 643
Query: 650 NQKTIFNELIGKISADSNFLELLSSMEVAIRENTDPFQQMRWLQFLDWNRETLEGHDRNL 709
NQ+TIF +I KI ++S FLE L +EVAI++N DPFQ++RWLQ L+W E +E H +
Sbjct: 644 NQRTIFIYIIDKICSESGFLEALRVVEVAIQKNEDPFQRLRWLQLLNWEAEMIEEHGGDF 703
Query: 710 PFTGAEIMFPLYAEHKDIAETTFMQVKSKFCSEVSFEDVIERYKMLLGKYKETRKQYMNG 769
P G E + L+ +H+D AE FM VKSKFC EV+FEDVI+ Y M+L KYK+TRKQYMNG
Sbjct: 704 PSVGFEKLSSLFNQHRDKAEVAFMNVKSKFCCEVAFEDVIDSYGMVLEKYKKTRKQYMNG 763
Query: 770 MMSLHC 775
M+SLHC
Sbjct: 764 MLSLHC 769
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144250|ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|222866669|gb|EEF03800.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359485116|ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852762 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357479435|ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago truncatula] gi|355511058|gb|AES92200.1| Lysine-specific demethylase NO66 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|147783372|emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449457281|ref|XP_004146377.1| PREDICTED: uncharacterized protein LOC101213846 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|116310856|emb|CAH67798.1| OSIGBa0132E09-OSIGBa0108L24.12 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|19387273|gb|AAL87184.1|AF480497_12 unknown [Oryza sativa Japonica Group] gi|38345193|emb|CAE02886.2| OSJNBa0015K02.3 [Oryza sativa Japonica Group] gi|38346410|emb|CAE54575.1| OSJNBa0011F23.16 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|218195745|gb|EEC78172.1| hypothetical protein OsI_17757 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|222629703|gb|EEE61835.1| hypothetical protein OsJ_16482 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 776 | ||||||
| UNIPROTKB|H0Y9L8 | 108 | MINA "Bifunctional lysine-spec | 0.126 | 0.907 | 0.442 | 2.8e-15 | |
| RGD|708521 | 465 | Mina "myc induced nuclear anti | 0.145 | 0.243 | 0.434 | 5.7e-15 | |
| UNIPROTKB|Q5EA24 | 462 | MINA "Bifunctional lysine-spec | 0.145 | 0.244 | 0.426 | 7.1e-15 | |
| MGI|MGI:1914264 | 465 | Mina "myc induced nuclear anti | 0.140 | 0.234 | 0.435 | 2.2e-14 | |
| UNIPROTKB|Q8IUF8 | 465 | MINA "Bifunctional lysine-spec | 0.145 | 0.243 | 0.426 | 2.4e-14 | |
| UNIPROTKB|Q16W06 | 635 | AAEL009382 "Bifunctional lysin | 0.168 | 0.206 | 0.358 | 4.1e-14 | |
| UNIPROTKB|E2RD59 | 578 | MINA "Uncharacterized protein" | 0.221 | 0.297 | 0.349 | 1.2e-13 | |
| UNIPROTKB|B4GUZ2 | 687 | GL12933 "Bifunctional lysine-s | 0.131 | 0.148 | 0.413 | 1.9e-13 | |
| UNIPROTKB|B3MSI4 | 843 | GF20792 "Bifunctional lysine-s | 0.177 | 0.163 | 0.361 | 5.9e-13 | |
| UNIPROTKB|B4I100 | 655 | GM12339 "Bifunctional lysine-s | 0.177 | 0.210 | 0.366 | 1.1e-12 |
| UNIPROTKB|H0Y9L8 MINA "Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Score = 203 (76.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 50/113 (44%), Positives = 67/113 (59%)
Query: 455 FGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIV 514
FG VG+N+Y+TP SQGL HYDD VF+ QL G K W+++ P+V L R Y+
Sbjct: 4 FGS-LVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY-HPTVPLAREYS----- 56
Query: 515 NGVEAESSMAE-CRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTL 566
VEAE + +F+L+ GD+LY PRG H+A D GLA S H+T+
Sbjct: 57 --VEAEERIGRPVHEFMLKPGDLLYFPRGTIHQA----DTPAGLAH-STHVTI 102
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| RGD|708521 Mina "myc induced nuclear antigen" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5EA24 MINA "Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914264 Mina "myc induced nuclear antigen" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8IUF8 MINA "Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q16W06 AAEL009382 "Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RD59 MINA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4GUZ2 GL12933 "Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B3MSI4 GF20792 "Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4I100 GM12339 "Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66" [Drosophila sechellia (taxid:7238)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.14.11 | 0.691 |
| 4th Layer | 1.14.11.27 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00031319001 | SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (783 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 776 | |||
| pfam08007 | 319 | pfam08007, Cupin_4, Cupin superfamily protein | 3e-22 | |
| COG2850 | 383 | COG2850, COG2850, Uncharacterized conserved protei | 8e-07 | |
| pfam13621 | 247 | pfam13621, Cupin_8, Cupin-like domain | 8e-05 |
| >gnl|CDD|219693 pfam08007, Cupin_4, Cupin superfamily protein | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 3e-22
Identities = 67/278 (24%), Positives = 103/278 (37%), Gaps = 76/278 (27%)
Query: 297 ENFIVNYWEVSPFLVRRS---TDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHISCL 353
E+F+ YW+ P L+RR+ +D+ GL+ +E V S L
Sbjct: 2 EDFLREYWQKKPLLIRRALPDFAGPFSPDDLA-----GLAQEEDVESRL----------- 45
Query: 354 PIASDELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYL 413
+ ++D + F ++ +
Sbjct: 46 -----------------------IKGDRDKNQWRV-SRGPFAERDFRKLP-----AADWT 76
Query: 414 IYANDISKCEEAYKEGYTIALRGME-FRFECLANIADGLASLFGQPSVGANMYLTPPNSQ 472
+ + L ++ FRF I D + S S N+Y TP SQ
Sbjct: 77 LLVQGVDLWLPE-----VAQL--LQPFRFLPDWRIDDIMISFSLVGS---NVYATPGGSQ 126
Query: 473 GLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLY--NPCDIVNGVEAESSMAECRQFL 530
G+ HYDD+ VF+ QL G K+W++ A P V Y P I++ E F+
Sbjct: 127 GVGPHYDDYDVFLLQLEGRKRWRVGA-PCVPDLEFYSDPPLRILDDFEPVH------DFV 179
Query: 531 LREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGV 568
L GD+LY+PRGF H+ DD SLH ++G
Sbjct: 180 LEPGDMLYLPRGFIHQGVALDD--------SLHYSVGF 209
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This family contains many hypothetical proteins that belong to the cupin superfamily. Length = 319 |
| >gnl|CDD|225406 COG2850, COG2850, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >gnl|CDD|222269 pfam13621, Cupin_8, Cupin-like domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 776 | |||
| KOG3706 | 629 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| COG2850 | 383 | Uncharacterized conserved protein [Function unknow | 100.0 | |
| PF08007 | 319 | Cupin_4: Cupin superfamily protein; InterPro: IPR0 | 100.0 | |
| PF13621 | 251 | Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU | 99.74 | |
| KOG2132 | 355 | consensus Uncharacterized conserved protein, conta | 99.0 | |
| KOG2131 | 427 | consensus Uncharacterized conserved protein, conta | 98.07 | |
| KOG2130 | 407 | consensus Phosphatidylserine-specific receptor Ptd | 98.05 | |
| KOG2508 | 437 | consensus Predicted phospholipase [Lipid transport | 97.76 | |
| PF02373 | 114 | JmjC: JmjC domain, hydroxylase; InterPro: IPR01312 | 97.38 | |
| TIGR03037 | 159 | anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase | 95.95 | |
| PRK13264 | 177 | 3-hydroxyanthranilate 3,4-dioxygenase; Provisional | 95.83 | |
| PF07883 | 71 | Cupin_2: Cupin domain; InterPro: IPR013096 This fa | 95.8 | |
| COG0662 | 127 | {ManC} Mannose-6-phosphate isomerase [Carbohydrate | 95.68 | |
| COG1917 | 131 | Uncharacterized conserved protein, contains double | 95.65 | |
| COG4101 | 142 | Predicted mannose-6-phosphate isomerase [Carbohydr | 94.75 | |
| PF00190 | 144 | Cupin_1: Cupin; InterPro: IPR006045 This family re | 94.55 | |
| PF02311 | 136 | AraC_binding: AraC-like ligand binding domain; Int | 94.09 | |
| TIGR03404 | 367 | bicupin_oxalic bicupin, oxalate decarboxylase fami | 92.49 | |
| TIGR03404 | 367 | bicupin_oxalic bicupin, oxalate decarboxylase fami | 92.04 | |
| KOG1633 | 776 | consensus F-box protein JEMMA and related proteins | 90.34 | |
| PF06052 | 151 | 3-HAO: 3-hydroxyanthranilic acid dioxygenase; Inte | 90.17 | |
| COG2140 | 209 | Thermophilic glucose-6-phosphate isomerase and rel | 90.14 | |
| PRK04190 | 191 | glucose-6-phosphate isomerase; Provisional | 89.7 | |
| PRK13290 | 125 | ectC L-ectoine synthase; Reviewed | 88.6 | |
| KOG2132 | 355 | consensus Uncharacterized conserved protein, conta | 88.38 | |
| smart00835 | 146 | Cupin_1 Cupin. This family represents the conserve | 88.22 | |
| PF06560 | 182 | GPI: Glucose-6-phosphate isomerase (GPI); InterPro | 87.98 | |
| PRK15457 | 233 | ethanolamine utilization protein EutQ; Provisional | 87.56 | |
| TIGR03214 | 260 | ura-cupin putative allantoin catabolism protein. T | 87.19 | |
| PRK13500 | 312 | transcriptional activator RhaR; Provisional | 86.47 | |
| PRK10296 | 278 | DNA-binding transcriptional regulator ChbR; Provis | 85.34 | |
| PRK09943 | 185 | DNA-binding transcriptional repressor PuuR; Provis | 83.84 | |
| PRK13502 | 282 | transcriptional activator RhaR; Provisional | 82.5 | |
| PRK13501 | 290 | transcriptional activator RhaR; Provisional | 82.31 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 82.24 | |
| TIGR03214 | 260 | ura-cupin putative allantoin catabolism protein. T | 80.68 | |
| smart00558 | 57 | JmjC A domain family that is part of the cupin met | 80.55 |
| >KOG3706 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=403.54 Aligned_cols=264 Identities=27% Similarity=0.353 Sum_probs=211.6
Q ss_pred ccCccccCchhhh--HHhhhccCC--CCHHHHHHhhhccCCeeeeccCCCccccccchhhhhcccccccchhhhhhhhhh
Q 004048 272 NADQLTTISKGRI--ERSIFSLNE--GCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQ 347 (776)
Q Consensus 272 ~~~~~~~~~~~~v--~~~lf~~~~--~s~e~Fl~~YWEKKPLLIRra~p~~~~~~~~fs~f~~~l~~~~~~~~l~~s~~~ 347 (776)
|+.-.+..+.++| .+++|+|++ +..++||++|||++|+||+|..|. +|.+++
T Consensus 181 Ea~~i~s~~adsv~~~srlfe~lisP~~t~tFfk~fwe~~allVqR~dpt------Yfgslf------------------ 236 (629)
T KOG3706|consen 181 EAAGIPSDDADSVDSPSRLFEWLISPIKTETFFKEFWEQKALLVQRDDPT------YFGSLF------------------ 236 (629)
T ss_pred HhccCCccccccccchHHHHHHhhcCCchHHHHHHHHhccceEEeccCcc------HHhhhh------------------
Confidence 3444444456666 899999997 566999999999999999999997 233333
Q ss_pred ccccCCCCCchhhhhhhchhhhhhhcCCCCccccceeEEEeCCCCcccccccCCCCCCccccCCccccccChhHHHHHhh
Q 004048 348 RHISCLPIASDELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAYK 427 (776)
Q Consensus 348 g~~s~~pi~~deLa~lalle~V~~~l~~p~~y~~d~Rlv~~~~~~~~E~h~~~~~~d~w~~r~Gp~~~f~d~~~l~~l~~ 427 (776)
|. +.|+++ .-++.+.||+++++.+|.|| ++|+-+.+|. +-+..+|.+|.
T Consensus 237 ---st-----------a~Ldel--l~r~hl~ygrnvnvarykNG-kRetLN~~GR--------------A~p~av~~f~q 285 (629)
T KOG3706|consen 237 ---ST-----------ADLDEL--LSRGHLYYGRNVNVARYKNG-KRETLNPDGR--------------ALPLAVWKFYQ 285 (629)
T ss_pred ---hH-----------hhHHHH--HhhcceeecccccceeeecC-cceecCCccc--------------cchHHHHHHHh
Confidence 22 224444 11245899999999999995 5687666632 12458999999
Q ss_pred CCceEEEcCcccCcHHHHHHHHHHHhhhCCCcccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCC--CCCC
Q 004048 428 EGYTIALRGMEFRFECLANIADGLASLFGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPS--VQLP 505 (776)
Q Consensus 428 ~G~TLvL~~ld~~~p~LaeL~~aLe~~FG~P~v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~--~~lP 505 (776)
+||||.+.+++.|...+|.+|..|++.||+ .|++|+|+||+|+|||+||||+.++||+|++|+|+|+||.|+. ..+|
T Consensus 286 ~~cSiqllnPqty~drlwq~cevlqeqFgc-~vGaNvYLTPagSqGfaPHyDdIeaFvlQvEGrK~Wrly~P~~~~eel~ 364 (629)
T KOG3706|consen 286 KGCSIQLLNPQTYKDRLWQICEVLQEQFGC-LVGANVYLTPAGSQGFAPHYDDIEAFVLQVEGRKHWRLYHPTVPLEELA 364 (629)
T ss_pred cCceEEeeCchhHHHHHHHHHHHHHHHhcc-ccccceeecCCCCCCCCCchhhhhhhhheeccceeeEeecCCCcHhhhh
Confidence 999999999999999999999999999998 8999999999999999999999999999999999999999753 2334
Q ss_pred CCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHH
Q 004048 506 RLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALC 585 (776)
Q Consensus 506 r~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~ 585 (776)
+.. .-|+.++++|+ |+++++|+|||+||+|||++|+|.+.+. . ||||||+|.+.+
T Consensus 365 l~s----S~Nf~eedlge-PV~e~vle~GDllYfPRG~IHQA~t~~~-v-----HSlHvTlStyqq-------------- 419 (629)
T KOG3706|consen 365 LVS----SDNFTEEDLGE-PVHEFVLEPGDLLYFPRGTIHQADTPAL-V-----HSLHVTLSTYQQ-------------- 419 (629)
T ss_pred hcc----CCCCChhHhCC-chHHhhcCCCcEEEecCcceeeccccch-h-----ceeEEEeehhhh--------------
Confidence 322 23455666775 5689999999999999999999999864 3 899999998643
Q ss_pred HhhhhcccccccccccchhhhhHhHHHHHHHHHHHhcCCChhhhhhhcc
Q 004048 586 CWNQAQKTHHHASIESFSGILNLMSVNLLHLLIGLFGHSDPTFRKACLV 634 (776)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~l~~~Ll~~Airl~~~~dp~~Rkac~v 634 (776)
..|.. +.+.+++.|+..+++++.+||++.|.
T Consensus 420 ----~s~an--------------lle~~ip~av~~a~d~~velRrGLP~ 450 (629)
T KOG3706|consen 420 ----NSWAN--------------LLEDTIPGAVFDAADEDVELRRGLPR 450 (629)
T ss_pred ----hhHHH--------------HHHHHHHHHHHHHHhhhhHHhhCCCh
Confidence 22222 66778899999999999999999554
|
|
| >COG2850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors | Back alignment and domain information |
|---|
| >PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A | Back alignment and domain information |
|---|
| >KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [] | Back alignment and domain information |
|---|
| >TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase | Back alignment and domain information |
|---|
| >PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional | Back alignment and domain information |
|---|
| >PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) | Back alignment and domain information |
|---|
| >COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] | Back alignment and domain information |
|---|
| >COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel) | Back alignment and domain information |
|---|
| >PF02311 AraC_binding: AraC-like ligand binding domain; InterPro: IPR003313 This entry defines the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC | Back alignment and domain information |
|---|
| >TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family | Back alignment and domain information |
|---|
| >TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family | Back alignment and domain information |
|---|
| >KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1 | Back alignment and domain information |
|---|
| >COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >PRK04190 glucose-6-phosphate isomerase; Provisional | Back alignment and domain information |
|---|
| >PRK13290 ectC L-ectoine synthase; Reviewed | Back alignment and domain information |
|---|
| >KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00835 Cupin_1 Cupin | Back alignment and domain information |
|---|
| >PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5 | Back alignment and domain information |
|---|
| >PRK15457 ethanolamine utilization protein EutQ; Provisional | Back alignment and domain information |
|---|
| >TIGR03214 ura-cupin putative allantoin catabolism protein | Back alignment and domain information |
|---|
| >PRK13500 transcriptional activator RhaR; Provisional | Back alignment and domain information |
|---|
| >PRK10296 DNA-binding transcriptional regulator ChbR; Provisional | Back alignment and domain information |
|---|
| >PRK09943 DNA-binding transcriptional repressor PuuR; Provisional | Back alignment and domain information |
|---|
| >PRK13502 transcriptional activator RhaR; Provisional | Back alignment and domain information |
|---|
| >PRK13501 transcriptional activator RhaR; Provisional | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >TIGR03214 ura-cupin putative allantoin catabolism protein | Back alignment and domain information |
|---|
| >smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 776 | ||||
| 2xdv_A | 442 | Crystal Structure Of The Catalytic Domain Of Flj143 | 6e-17 | ||
| 4e4h_A | 463 | Crystal Structure Of Histone Demethylase No66 Lengt | 6e-14 | ||
| 4diq_A | 489 | Crystal Structure Of Human No66 Length = 489 | 6e-14 |
| >pdb|2XDV|A Chain A, Crystal Structure Of The Catalytic Domain Of Flj14393 Length = 442 | Back alignment and structure |
|
| >pdb|4E4H|A Chain A, Crystal Structure Of Histone Demethylase No66 Length = 463 | Back alignment and structure |
| >pdb|4DIQ|A Chain A, Crystal Structure Of Human No66 Length = 489 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens} Length = 442 | Back alignment and structure |
|---|
Score = 112 bits (280), Expect = 2e-26
Identities = 64/265 (24%), Positives = 106/265 (40%), Gaps = 35/265 (13%)
Query: 314 STDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQR---HI-SCLPIASDELDILSFLNDM 369
S + + +F S + + ++ F +++ I P + L L D+
Sbjct: 8 SALNFDSPSSLFESLISPIKTET----FFKEFWEQKPLLIQRDDPALATYYGSLFKLTDL 63
Query: 370 RHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAYKEG 429
+ + Y +D+ V + KK ++ + KD ++
Sbjct: 64 KSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKD--------------FDQKR 109
Query: 430 YTIALRGMEFRFECLANIADGLASLFGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLF 489
TI + + L I + L FG VG+N+Y+TP SQGL HYDD VF+ QL
Sbjct: 110 ATIQFHQPQRFKDELWRIQEKLECYFGSL-VGSNVYITPAGSQGLPPHYDDVEVFILQLE 168
Query: 490 GTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACT 549
G K W+++ P+V L R Y+ +F+L+ GD+LY PRG H+A T
Sbjct: 169 GEKHWRLYH-PTVPLAREYSVEAEERIGR------PVHEFMLKPGDLLYFPRGTIHQADT 221
Query: 550 EDDGRTGLAEFSLHLTLGVEVERPF 574
S H+T+ +
Sbjct: 222 PAG-----LAHSTHVTISTYQNNSW 241
|
| >1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Length = 342 | Back alignment and structure |
|---|
| >4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens} Length = 489 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... Length = 349 | Back alignment and structure |
|---|
| >3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* Length = 338 | Back alignment and structure |
|---|
| >3uyj_A Lysine-specific demethylase 8; jellyroll-like all beta fold, nuclear, oxidored; HET: AKG; 2.35A {Homo sapiens} PDB: 4aap_A* Length = 248 | Back alignment and structure |
|---|
| >3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Length = 336 | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 | Back alignment and structure |
|---|
| >3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* Length = 397 | Back alignment and structure |
|---|
| >3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 | Back alignment and structure |
|---|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 | Back alignment and structure |
|---|
| >3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* Length = 371 | Back alignment and structure |
|---|
| >3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* Length = 392 | Back alignment and structure |
|---|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 776 | |||
| 4diq_A | 489 | Lysine-specific demethylase NO66; structural genom | 100.0 | |
| 2xdv_A | 442 | MYC-induced nuclear antigen; ribosome biogenesis, | 100.0 | |
| 1vrb_A | 342 | Putative asparaginyl hydroxylase; 2636534, structu | 100.0 | |
| 4gjz_A | 235 | Lysine-specific demethylase 8; JMJC, beta barrel, | 99.87 | |
| 3al5_A | 338 | HTYW5, JMJC domain-containing protein C2ORF60; tRN | 99.83 | |
| 3d8c_A | 349 | Hypoxia-inducible factor 1 alpha inhibitor; FIH, H | 99.59 | |
| 3k2o_A | 336 | Bifunctional arginine demethylase and lysyl-hydro | 99.36 | |
| 2yu1_A | 451 | JMJC domain-containing histone demethylation PROT; | 99.12 | |
| 3kv5_D | 488 | JMJC domain-containing histone demethylation prote | 99.12 | |
| 3k3o_A | 371 | PHF8, PHD finger protein 8; histone demethylase, c | 99.11 | |
| 3kv9_A | 397 | JMJC domain-containing histone demethylation prote | 99.06 | |
| 3kv4_A | 447 | PHD finger protein 8; epigenetics, histone CODE, c | 99.01 | |
| 3pua_A | 392 | GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe | 98.95 | |
| 3pur_A | 528 | Lysine-specific demethylase 7 homolog; oxidoreduct | 98.66 | |
| 3l2h_A | 162 | Putative sugar phosphate isomerase; AFE_0303, stru | 96.11 | |
| 1yhf_A | 115 | Hypothetical protein SPY1581; structural genomics, | 96.1 | |
| 3fjs_A | 114 | Uncharacterized protein with RMLC-like cupin fold; | 95.97 | |
| 3h8u_A | 125 | Uncharacterized conserved protein with double-STR | 95.8 | |
| 1v70_A | 105 | Probable antibiotics synthesis protein; structural | 95.78 | |
| 2ozj_A | 114 | Cupin 2, conserved barrel; cupin superfamily prote | 95.65 | |
| 3lwc_A | 119 | Uncharacterized protein; structural genomics, unkn | 95.62 | |
| 4e2g_A | 126 | Cupin 2 conserved barrel domain protein; MCSG, PSI | 95.41 | |
| 2b8m_A | 117 | Hypothetical protein MJ0764; structural genomics, | 95.26 | |
| 3rns_A | 227 | Cupin 2 conserved barrel domain protein; structura | 95.24 | |
| 2pfw_A | 116 | Cupin 2, conserved barrel domain protein; cupin do | 95.16 | |
| 2o8q_A | 134 | Hypothetical protein; cpuin-like fold, structural | 95.16 | |
| 2gu9_A | 113 | Tetracenomycin polyketide synthesis protein; X-RAY | 95.1 | |
| 4i4a_A | 128 | Similar to unknown protein; structural genomics, P | 95.06 | |
| 3ht1_A | 145 | REMF protein; cupin fold, Zn-binding, antibiotic b | 94.95 | |
| 3cew_A | 125 | Uncharacterized cupin protein; all beta-protein, j | 94.75 | |
| 1dgw_A | 178 | Canavalin; duplicated swiss-roll beta barrels, loo | 94.74 | |
| 3ibm_A | 167 | Cupin 2, conserved barrel domain protein; cupin 2 | 94.56 | |
| 3kgz_A | 156 | Cupin 2 conserved barrel domain protein; metallopr | 94.53 | |
| 2q30_A | 110 | Uncharacterized protein; double-stranded beta-heli | 94.41 | |
| 2oa2_A | 148 | BH2720 protein; 10175341, structural genomics, joi | 94.19 | |
| 3d82_A | 102 | Cupin 2, conserved barrel domain protein; structur | 94.03 | |
| 1lr5_A | 163 | Auxin binding protein 1; beta jellyroll, double st | 94.01 | |
| 3i7d_A | 163 | Sugar phosphate isomerase; YP_168127.1, structural | 93.83 | |
| 2vqa_A | 361 | SLL1358 protein, MNCA; periplasmic binding protein | 93.67 | |
| 3fz3_A | 531 | Prunin; TREE NUT allergen, allergy, amandin, almon | 93.64 | |
| 2opk_A | 112 | Hypothetical protein; putative mannose-6-phosphate | 93.62 | |
| 1x82_A | 190 | Glucose-6-phosphate isomerase; cupin superfamily, | 93.48 | |
| 1yfu_A | 174 | 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxid | 93.37 | |
| 3jzv_A | 166 | Uncharacterized protein RRU_A2000; structural geno | 93.36 | |
| 2f4p_A | 147 | Hypothetical protein TM1010; double-stranded beta- | 93.31 | |
| 1vj2_A | 126 | Novel manganese-containing cupin TM1459; structura | 93.29 | |
| 3lag_A | 98 | Uncharacterized protein RPA4178; functionally unkn | 93.26 | |
| 1y9q_A | 192 | Transcriptional regulator, HTH_3 family; transcrip | 93.21 | |
| 3rns_A | 227 | Cupin 2 conserved barrel domain protein; structura | 93.2 | |
| 1fxz_A | 476 | Glycinin G1; proglycinin, legumin, SEED storage pr | 93.09 | |
| 1o5u_A | 101 | Novel thermotoga maritima enzyme TM1112; cupin, st | 92.78 | |
| 3c3v_A | 510 | Arachin ARAH3 isoform; peanut allergen, allergy, g | 92.73 | |
| 1fi2_A | 201 | Oxalate oxidase, germin; beta-jellyroll, oxidoredu | 92.7 | |
| 2d5f_A | 493 | Glycinin A3B4 subunit; soybean, globulin, 11S,SEED | 92.66 | |
| 3kgl_A | 466 | Cruciferin; 11S SEED globulin, rapeseed, SEED stor | 92.53 | |
| 1y3t_A | 337 | Hypothetical protein YXAG; BI cupin, dioxygenase, | 92.51 | |
| 4b29_A | 217 | Dimethylsulfoniopropionate lyase; hydrolase, dimet | 92.51 | |
| 2vpv_A | 166 | Protein MIF2, MIF2P; nucleus, mitosis, centromere, | 92.51 | |
| 1vr3_A | 191 | Acireductone dioxygenase; 13543033, structural gen | 92.31 | |
| 1zvf_A | 176 | 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll b | 92.25 | |
| 3ksc_A | 496 | LEGA class, prolegumin; PEA prolegumin, 11S SEED s | 92.14 | |
| 1j58_A | 385 | YVRK protein; cupin, decarboxyklase, oxalate, mang | 92.13 | |
| 2e9q_A | 459 | 11S globulin subunit beta; cucubitin, pumpkin SEED | 91.99 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 91.98 | |
| 3bcw_A | 123 | Uncharacterized protein; structural genomics, join | 91.93 | |
| 1o4t_A | 133 | Putative oxalate decarboxylase; double-stranded be | 91.91 | |
| 4h7l_A | 157 | Uncharacterized protein; structural genomics, PSI- | 91.84 | |
| 2i45_A | 107 | Hypothetical protein; neisseria meningitidis cupin | 91.83 | |
| 2ypd_A | 392 | Probable JMJC domain-containing histone demethyla | 91.82 | |
| 3h7j_A | 243 | Bacilysin biosynthesis protein BACB; YWFC, bacilys | 91.67 | |
| 1juh_A | 350 | Quercetin 2,3-dioxygenase; cupin, glycoprotein, be | 91.63 | |
| 3h7j_A | 243 | Bacilysin biosynthesis protein BACB; YWFC, bacilys | 91.53 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 91.48 | |
| 2xlg_A | 239 | SLL1785 protein, CUCA; metal binding protein, cupi | 91.4 | |
| 2fqp_A | 97 | Hypothetical protein BP2299; double-stranded beta- | 91.15 | |
| 3bu7_A | 394 | Gentisate 1,2-dioxygenase; cupin domain, oxidoredu | 91.11 | |
| 2vqa_A | 361 | SLL1358 protein, MNCA; periplasmic binding protein | 90.99 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 90.64 | |
| 2d40_A | 354 | Z3393, putative gentisate 1,2-dioxygenase; gentisi | 90.42 | |
| 1j58_A | 385 | YVRK protein; cupin, decarboxyklase, oxalate, mang | 90.42 | |
| 1uij_A | 416 | Beta subunit of beta conglycinin; double-stranded | 90.29 | |
| 2y0o_A | 175 | Probable D-lyxose ketol-isomerase; carbohydrate me | 90.25 | |
| 3s57_A | 204 | Alpha-ketoglutarate-dependent dioxygenase ALKB HO; | 90.21 | |
| 2ea7_A | 434 | 7S globulin-1; beta barrel, cupin superfamily, pla | 90.2 | |
| 4ask_A | 510 | Lysine-specific demethylase 6B; oxidoreductase, KD | 90.11 | |
| 3qac_A | 465 | 11S globulin SEED storage protein; 11S SEED storag | 90.01 | |
| 4axo_A | 151 | EUTQ, ethanolamine utilization protein; structural | 89.7 | |
| 2bnm_A | 198 | Epoxidase; oxidoreductase, cupin, HTH, cation-depe | 89.69 | |
| 1y3t_A | 337 | Hypothetical protein YXAG; BI cupin, dioxygenase, | 89.67 | |
| 3nw4_A | 368 | Gentisate 1,2-dioxygenase; beta-barrel, oxidoreduc | 89.43 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 89.15 | |
| 2d40_A | 354 | Z3393, putative gentisate 1,2-dioxygenase; gentisi | 89.15 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 88.94 | |
| 3bu7_A | 394 | Gentisate 1,2-dioxygenase; cupin domain, oxidoredu | 88.7 | |
| 2qnk_A | 286 | 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fol | 88.67 | |
| 2phl_A | 397 | Phaseolin; plant SEED storage protein(vicilin); HE | 88.44 | |
| 3d0j_A | 140 | Uncharacterized protein CA_C3497; beta-barrel, str | 88.37 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 88.37 | |
| 2gm6_A | 208 | Cysteine dioxygenase type I; structural genomics, | 88.22 | |
| 1juh_A | 350 | Quercetin 2,3-dioxygenase; cupin, glycoprotein, be | 88.19 | |
| 2pyt_A | 133 | Ethanolamine utilization protein EUTQ; structural | 87.79 | |
| 2xxz_A | 332 | Lysine-specific demethylase 6B; oxidoreductase, hi | 87.71 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 87.42 | |
| 1zrr_A | 179 | E-2/E-2' protein; nickel, cupin, beta helix, methi | 86.6 | |
| 1rc6_A | 261 | Hypothetical protein YLBA; structural genomics, NY | 86.46 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 86.0 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 85.99 | |
| 1sef_A | 274 | Conserved hypothetical protein; structural genomic | 85.81 | |
| 2cav_A | 445 | Protein (canavalin); vicilin, 7S SEED protein, dom | 85.61 | |
| 1rc6_A | 261 | Hypothetical protein YLBA; structural genomics, NY | 85.45 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 84.59 | |
| 1uij_A | 416 | Beta subunit of beta conglycinin; double-stranded | 84.34 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 84.23 | |
| 1sef_A | 274 | Conserved hypothetical protein; structural genomic | 84.21 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 84.04 | |
| 2arc_A | 164 | ARAC, arabinose operon regulatory protein; transcr | 84.0 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 83.32 | |
| 2ea7_A | 434 | 7S globulin-1; beta barrel, cupin superfamily, pla | 83.3 | |
| 2cav_A | 445 | Protein (canavalin); vicilin, 7S SEED protein, dom | 82.78 | |
| 2d5f_A | 493 | Glycinin A3B4 subunit; soybean, globulin, 11S,SEED | 82.24 | |
| 3i3q_A | 211 | Alpha-ketoglutarate-dependent dioxygenase ALKB; be | 82.21 | |
| 3avr_A | 531 | Lysine-specific demethylase 6A; cupin superfamily, | 82.08 | |
| 2e9q_A | 459 | 11S globulin subunit beta; cucubitin, pumpkin SEED | 81.91 | |
| 1sq4_A | 278 | GLXB, glyoxylate-induced protein; structural genom | 81.74 | |
| 2o1q_A | 145 | Putative acetyl/propionyl-COA carboxylase, alpha; | 81.45 | |
| 1fxz_A | 476 | Glycinin G1; proglycinin, legumin, SEED storage pr | 81.45 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 81.1 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 80.91 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 80.69 | |
| 1sfn_A | 246 | Conserved hypothetical protein; structural genomic | 80.66 |
| >4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=424.59 Aligned_cols=299 Identities=25% Similarity=0.323 Sum_probs=230.4
Q ss_pred hhhhHHhhhccC--CCCHHHHHHhhhccCCeeeeccCCCccccccchhhhhcccccccchhhhhhhhhhccccCCCCCch
Q 004048 281 KGRIERSIFSLN--EGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHISCLPIASD 358 (776)
Q Consensus 281 ~~~v~~~lf~~~--~~s~e~Fl~~YWEKKPLLIRra~p~~~~~~~~fs~f~~~l~~~~~~~~l~~s~~~g~~s~~pi~~d 358 (776)
..+.++++|.|+ ++++++||++||||||++||++.|+ ++ . .+++.+
T Consensus 39 s~~~~~~~l~~Ll~pis~e~Fl~~yWqKkPLlIr~~~p~----------~f-----------------~-----~L~S~~ 86 (489)
T 4diq_A 39 SRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQDHT----------YY-----------------Q-----GLFSTA 86 (489)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHTTTTCCEEECCSCTT----------TT-----------------T-----TSCCHH
T ss_pred hHHHHHHHHHHHhCCCCHHHHHHHHHhhCcEEEecCCcc----------cc-----------------c-----CCCCHH
Confidence 566788888887 4789999999999999999999987 22 1 345778
Q ss_pred hhhhhhchhhhhhhcCCCCccccceeEEEeCCCCcccccccCCCCCCccccCCccccccChhHHHHHhhCCceEEEcCcc
Q 004048 359 ELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAYKEGYTIALRGME 438 (776)
Q Consensus 359 eLa~lalle~V~~~l~~p~~y~~d~Rlv~~~~~~~~E~h~~~~~~d~w~~r~Gp~~~f~d~~~l~~l~~~G~TLvL~~ld 438 (776)
+|+++..++++ .||.++++++|.++ . |...+||+. .+++++++++.+|+|+++++++
T Consensus 87 ~l~~Ll~~~~v--------~~g~~v~~~~y~~g-~------------~~~~n~~g~--~~p~~vw~ll~~G~Tl~L~~~~ 143 (489)
T 4diq_A 87 DLDSMLRNEEV--------QFGQHLDAARYING-R------------RETLNPPGR--ALPAAAWSLYQAGCSLRLLCPQ 143 (489)
T ss_dssp HHHHHHHHSCC--------BBTTTEEEEEEETT-E------------EEECCCSSB--CCHHHHHHHHHTTCEEEESCGG
T ss_pred HHHHHHHhcCc--------ccCcccceEEEeCC-e------------eEeeCCCCc--cCHHHHHHHHhCCCeEEECChh
Confidence 88888766554 68889999999873 2 334445543 4677899999999999999999
Q ss_pred cCcHHHHHHHHHHHhhhCCCcccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCC--CCCCCCCCCCCCCC
Q 004048 439 FRFECLANIADGLASLFGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSV--QLPRLYNPCDIVNG 516 (776)
Q Consensus 439 ~~~p~LaeL~~aLe~~FG~P~v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~--~lPr~~~pf~p~~~ 516 (776)
+++|.++++++.|++.||+ .+++|+|+||+|++||++|||+||||++|+.|+|+|+||+|... .+|.... .+.
T Consensus 144 ~f~p~l~~l~~~Le~~fg~-~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~----~~~ 218 (489)
T 4diq_A 144 AFSTTVWQFLAVLQEQFGS-MAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSS----PNF 218 (489)
T ss_dssp GTCHHHHHHHHHHHHHHTS-CEEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCC----CCC
T ss_pred hcChHHHHHHHHHHHHhCC-cccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCccc----ccC
Confidence 9999999999999999998 59999999999999999999999999999999999999987543 2443221 111
Q ss_pred cccccccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhhhhcccccc
Q 004048 517 VEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQAQKTHHH 596 (776)
Q Consensus 517 ~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~~~~~~~~~ 596 (776)
...+.+ .+..+++|+||||||||+||||++++.+++ +|+|+|||+. ++.+|.+
T Consensus 219 ~~~~~~-~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~------~SlhlTi~~~--~~~tw~d------------------ 271 (489)
T 4diq_A 219 SQDDLG-EPVLQTVLEPGDLLYFPRGFIHQAECQDGV------HSLHLTLSTY--QRNTWGD------------------ 271 (489)
T ss_dssp CGGGCC-CCSEEEEECTTCEEEECTTCEEEEEBCSSC------CEEEEEEEEC--TTCBHHH------------------
T ss_pred Cccccc-CcceEEEECCCCEEEECCCCceEEEecCCC------ceEEEeeccc--CcccHHH------------------
Confidence 122222 246899999999999999999999998754 8999999995 3456764
Q ss_pred cccccchhhhhHhHHHHHHHHHHHhcCCChhhhhhhccccC--C--CCCCChhhhhhhhHHHHHHHHHhhhccCcHHHHH
Q 004048 597 ASIESFSGILNLMSVNLLHLLIGLFGHSDPTFRKACLVGAV--S--RPSDTKDWFYLNQKTIFNELIGKISADSNFLELL 672 (776)
Q Consensus 597 ~l~~~~~~~~~~l~~~Ll~~Airl~~~~dp~~Rkac~va~~--L--pp~~~~~~l~~~~r~~F~~li~~i~~~~~~~~al 672 (776)
+.+.++..|++.++++|+++|++.|.+.. + -.++....-+......++++++++.....++.|+
T Consensus 272 ------------ll~~ll~~al~~a~~~d~~~R~~LP~~~~~~~g~~~~d~~~~~r~~~~~~~~~l~~~l~~~~~~d~a~ 339 (489)
T 4diq_A 272 ------------FLEAILPLAVQAAMEENVEFRRGLPRDFMDYMGAQHSDSKDPRRTAFMEKVRVLVARLGHFAPVDAVA 339 (489)
T ss_dssp ------------HHHHHHHHHHHHHHHHCGGGGSBCCTTGGGTCSGGGTTCCCHHHHHHHHHHHHHHHHHGGGCCHHHHH
T ss_pred ------------HHHHHHHHHHHHHHhcCHHhhccCChhHHhhcCccccCcccHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 33446667777777789999999665531 0 0011011122334456779999999999999999
Q ss_pred HHHHHH
Q 004048 673 SSMEVA 678 (776)
Q Consensus 673 ~~~~~a 678 (776)
++|.+.
T Consensus 340 d~~~k~ 345 (489)
T 4diq_A 340 DQRAKD 345 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888643
|
| >2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens} | Back alignment and structure |
|---|
| >1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 | Back alignment and structure |
|---|
| >4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A* | Back alignment and structure |
|---|
| >3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* | Back alignment and structure |
|---|
| >3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... | Back alignment and structure |
|---|
| >3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* | Back alignment and structure |
|---|
| >2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* | Back alignment and structure |
|---|
| >3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* | Back alignment and structure |
|---|
| >3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* | Back alignment and structure |
|---|
| >3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} | Back alignment and structure |
|---|
| >3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* | Back alignment and structure |
|---|
| >3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} | Back alignment and structure |
|---|
| >1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
| >3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A | Back alignment and structure |
|---|
| >2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense} | Back alignment and structure |
|---|
| >3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} | Back alignment and structure |
|---|
| >4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
| >2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 | Back alignment and structure |
|---|
| >3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} | Back alignment and structure |
|---|
| >2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina} | Back alignment and structure |
|---|
| >2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A | Back alignment and structure |
|---|
| >4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp} | Back alignment and structure |
|---|
| >3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A | Back alignment and structure |
|---|
| >3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A | Back alignment and structure |
|---|
| >3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1} | Back alignment and structure |
|---|
| >3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans} | Back alignment and structure |
|---|
| >3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} | Back alignment and structure |
|---|
| >1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* | Back alignment and structure |
|---|
| >3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
| >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} | Back alignment and structure |
|---|
| >3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A | Back alignment and structure |
|---|
| >2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A* | Back alignment and structure |
|---|
| >1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A* | Back alignment and structure |
|---|
| >3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
| >2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 | Back alignment and structure |
|---|
| >3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 | Back alignment and structure |
|---|
| >3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} | Back alignment and structure |
|---|
| >1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A | Back alignment and structure |
|---|
| >1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A | Back alignment and structure |
|---|
| >3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} | Back alignment and structure |
|---|
| >1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A | Back alignment and structure |
|---|
| >3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus} | Back alignment and structure |
|---|
| >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* | Back alignment and structure |
|---|
| >4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism} | Back alignment and structure |
|---|
| >2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6 | Back alignment and structure |
|---|
| >1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20 | Back alignment and structure |
|---|
| >3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} | Back alignment and structure |
|---|
| >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A | Back alignment and structure |
|---|
| >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50} | Back alignment and structure |
|---|
| >1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus} | Back alignment and structure |
|---|
| >2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* | Back alignment and structure |
|---|
| >1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* | Back alignment and structure |
|---|
| >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A | Back alignment and structure |
|---|
| >2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} | Back alignment and structure |
|---|
| >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A | Back alignment and structure |
|---|
| >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* | Back alignment and structure |
|---|
| >2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
| >3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* | Back alignment and structure |
|---|
| >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A | Back alignment and structure |
|---|
| >4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A* | Back alignment and structure |
|---|
| >3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus} | Back alignment and structure |
|---|
| >4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile} | Back alignment and structure |
|---|
| >2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A | Back alignment and structure |
|---|
| >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* | Back alignment and structure |
|---|
| >3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A | Back alignment and structure |
|---|
| >2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* | Back alignment and structure |
|---|
| >3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19 | Back alignment and structure |
|---|
| >1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* | Back alignment and structure |
|---|
| >2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24 | Back alignment and structure |
|---|
| >2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
| >1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A | Back alignment and structure |
|---|
| >1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11 | Back alignment and structure |
|---|
| >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B | Back alignment and structure |
|---|
| >1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 | Back alignment and structure |
|---|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
| >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11 | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A | Back alignment and structure |
|---|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
| >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A | Back alignment and structure |
|---|
| >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B | Back alignment and structure |
|---|
| >2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A | Back alignment and structure |
|---|
| >3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... | Back alignment and structure |
|---|
| >3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A* | Back alignment and structure |
|---|
| >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A | Back alignment and structure |
|---|
| >1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11 | Back alignment and structure |
|---|
| >2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21 | Back alignment and structure |
|---|
| >1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A | Back alignment and structure |
|---|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 776 | ||||
| d1vrba1 | 319 | b.82.2.11 (A:8-326) Putative asparaginyl hydroxyla | 8e-14 | |
| d1h2ka_ | 335 | b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibit | 7e-06 | |
| d1jdha_ | 529 | a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) | 5e-04 |
| >d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Length = 319 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Asparaginyl hydroxylase-like domain: Putative asparaginyl hydroxylase YxbC species: Bacillus subtilis [TaxId: 1423]
Score = 71.1 bits (173), Expect = 8e-14
Identities = 37/264 (14%), Positives = 81/264 (30%), Gaps = 30/264 (11%)
Query: 410 DPYLIYANDISKCEEAYKEGYTIALRGMEFRFECLANIADGLASLFGQPS--VGANMYLT 467
+ ++ E Y++G + + + + L + P+ +
Sbjct: 69 GITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYA 128
Query: 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVE--------- 518
N G +H+D + + Q+ G K WK+ +V P +
Sbjct: 129 AKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKG 188
Query: 519 --AESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEW 576
+ + + L G +LY+PRG H ++ +L++T G
Sbjct: 189 DPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQAT------LALNITFGQPAWLDLML 242
Query: 577 EGFAHVAL--CCWNQAQKTHHHASIESFSGILNLMSVNLLHLLIGLFGHSDPTFRKACLV 634
+ + + H S S + + +L+ L P
Sbjct: 243 AALRKKLISDNRFRELAVNHQSLHESSKSELNGYLE-SLIQTLSENAETLTPEQ------ 295
Query: 635 GAVSRPSDTKDWFYLNQKTIFNEL 658
+ + D+ Y + + +F +L
Sbjct: 296 --IFQSQDSDFDPYQSTQLVFRQL 317
|
| >d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 776 | |||
| d1vrba1 | 319 | Putative asparaginyl hydroxylase YxbC {Bacillus su | 100.0 | |
| d1h2ka_ | 335 | Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum | 99.61 | |
| d2b8ma1 | 108 | Hypothetical protein MJ0764 {Archaeon Methanococcu | 96.92 | |
| d1lr5a_ | 160 | Auxin binding protein {Maize (Zea mays) [TaxId: 45 | 96.77 | |
| d1v70a_ | 105 | Hypothetical protein TTHA0104 {Thermus thermophilu | 96.58 | |
| d1yhfa1 | 112 | Hypothetical protein SPy1581 {Streptococcus pyogen | 96.49 | |
| d2f4pa1 | 134 | Hypothetical protein TM1010 {Thermotoga maritima [ | 95.92 | |
| d1fxza2 | 174 | Seed storage 7S protein {Soybean (Glycine max), pr | 95.6 | |
| d1vj2a_ | 114 | Hypothetical protein TM1459 {Thermotoga maritima [ | 95.54 | |
| g1dgw.1 | 168 | Seed storage 7S protein {Jack bean (Canavalia ensi | 95.49 | |
| d1o4ta_ | 115 | Hypothetical protein TM1287 {Thermotoga maritima [ | 95.38 | |
| d1juha_ | 348 | Quercetin 2,3-dioxygenase {Aspergillus japonicus [ | 95.25 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 95.24 | |
| d1uija1 | 170 | Seed storage 7S protein {Soybean (Glycine max), be | 95.04 | |
| d1od5a2 | 173 | Seed storage 7S protein {Soybean (Glycine max), gl | 95.02 | |
| d1uika1 | 203 | Seed storage 7S protein {Soybean (Glycine max), be | 94.75 | |
| d2phla2 | 162 | Seed storage 7S protein {French bean (Phaseolus vu | 94.63 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 94.59 | |
| d2pyta1 | 128 | Ethanolamine utilization protein EutQ {Salmonella | 94.59 | |
| d2d40a1 | 308 | Gentisate 1,2-dioxygenase {Escherichia coli [TaxId | 94.05 | |
| d1dgwa_ | 178 | Seed storage 7S protein {Jack bean (Canavalia ensi | 93.81 | |
| d1y3ta1 | 330 | Hypothetical protein YxaG {Bacillus subtilis [TaxI | 93.75 | |
| d1y9qa2 | 99 | Probable transcriptional regulator VC1968, C-termi | 93.74 | |
| d2et1a1 | 201 | Germin {Barley (Hordeum vulgare) [TaxId: 4513]} | 93.18 | |
| d1uika2 | 185 | Seed storage 7S protein {Soybean (Glycine max), be | 93.06 | |
| d1y3ta1 | 330 | Hypothetical protein YxaG {Bacillus subtilis [TaxI | 92.83 | |
| d1juha_ | 348 | Quercetin 2,3-dioxygenase {Aspergillus japonicus [ | 92.33 | |
| d2phda1 | 351 | Gentisate 1,2-dioxygenase {Pseudaminobacter salicy | 92.29 | |
| d1x82a_ | 190 | Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc | 92.12 | |
| d1zvfa1 | 175 | 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yea | 92.09 | |
| d2iuwa1 | 210 | AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] | 92.06 | |
| d1sefa_ | 250 | Hypothetical protein EF2996 {Enterococcus faecalis | 91.83 | |
| d2d40a1 | 308 | Gentisate 1,2-dioxygenase {Escherichia coli [TaxId | 91.27 | |
| d1sefa_ | 250 | Hypothetical protein EF2996 {Enterococcus faecalis | 91.24 | |
| d1yfua1 | 174 | 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia m | 90.83 | |
| d1rc6a_ | 253 | Hypothetical protein YlbA {Escherichia coli [TaxId | 90.8 | |
| d1rc6a_ | 253 | Hypothetical protein YlbA {Escherichia coli [TaxId | 89.78 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 89.72 | |
| d1sq4a_ | 273 | Glyoxylate-induced protein PA1140 {Pseudomonas aer | 89.05 | |
| d2bnma2 | 122 | Hydroxypropylphosphonic acid epoxidase Fom4, C-ter | 88.49 | |
| d2phla1 | 200 | Seed storage 7S protein {French bean (Phaseolus vu | 88.34 | |
| d1sfna_ | 245 | Hypothetical protein DR1152 {Deinococcus radiodura | 87.49 | |
| d1sq4a_ | 273 | Glyoxylate-induced protein PA1140 {Pseudomonas aer | 87.12 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 87.04 | |
| d1nxma_ | 194 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Strepto | 85.52 | |
| d1sfna_ | 245 | Hypothetical protein DR1152 {Deinococcus radiodura | 85.17 | |
| d2phda1 | 351 | Gentisate 1,2-dioxygenase {Pseudaminobacter salicy | 83.27 | |
| d1fxza1 | 239 | Seed storage 7S protein {Soybean (Glycine max), pr | 82.69 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 81.5 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 81.45 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 80.49 | |
| d1zrra1 | 179 | Acireductone dioxygenase {Klebsiella pneumoniae [T | 80.46 |
| >d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Asparaginyl hydroxylase-like domain: Putative asparaginyl hydroxylase YxbC species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.4e-33 Score=285.10 Aligned_cols=134 Identities=19% Similarity=0.344 Sum_probs=101.9
Q ss_pred ChhHHHHHhhCCceEEEcCcccCcHHHHHHHHHHHhhhCCCcc---cceeEEcCCCCCcccccccCCCeEEEEEeeeEEE
Q 004048 418 DISKCEEAYKEGYTIALRGMEFRFECLANIADGLASLFGQPSV---GANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQW 494 (776)
Q Consensus 418 d~~~l~~l~~~G~TLvL~~ld~~~p~LaeL~~aLe~~FG~P~v---~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrW 494 (776)
....+.+++++|+|++++.++.+.+.+++++..++..+++|.+ ++++|++|+ ++|+++|||.+|||++|+.|+|+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~H~D~~d~f~~Qv~G~K~W 155 (319)
T d1vrba1 77 SPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKN-GGGFKAHFDAYTNLIFQIQGEKTW 155 (319)
T ss_dssp CHHHHHHHHHTTCCEEECCGGGTCTHHHHHHHHHHHHTTCCTTCCEEEEEEEECS-SCCCCSEECSSEEEEEEEESCEEE
T ss_pred chHHHHHHHhcCCEEEEechhhcChHHHHHHhhhHHhhcCcccccceeEEEecCC-CCCCccccCCCceeEEeecceEEE
Confidence 4567888999999999999999999999999999999987533 456777776 678999999999999999999999
Q ss_pred EEecCCCCCCC--CCC---CCCCCCCCcc------cccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 495 KIFAQPSVQLP--RLY---NPCDIVNGVE------AESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 495 rL~~pp~~~lP--r~~---~pf~p~~~~~------dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
+||+|.....+ ... .+..+.+... .....+++.+++|+|||+||||+||||++++.++
T Consensus 156 ~L~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~pGDvLYiP~gw~H~v~s~~~ 224 (319)
T d1vrba1 156 KLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQA 224 (319)
T ss_dssp EEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred EEeCCccccccccCcccccCccccccccccchhhchhhhcCccEEEEECCCCEEEeCCCceEEeEecCC
Confidence 99987543322 100 0010000000 0012235689999999999999999999999764
|
| >d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} | Back information, alignment and structure |
|---|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1dgwa_ b.82.1.2 (A:) Seed storage 7S protein {Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]} | Back information, alignment and structure |
|---|
| >d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} | Back information, alignment and structure |
|---|
| >d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} | Back information, alignment and structure |
|---|
| >d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1zvfa1 b.82.1.20 (A:1-175) 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1yfua1 b.82.1.20 (A:1-174) 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia metallidurans [TaxId: 119219]} | Back information, alignment and structure |
|---|
| >d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
| >d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} | Back information, alignment and structure |
|---|
| >d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
| >d1nxma_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Streptococcus suis [TaxId: 1307]} | Back information, alignment and structure |
|---|
| >d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} | Back information, alignment and structure |
|---|
| >d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|