Citrus Sinensis ID: 004072

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-----

MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

cccccccHHHHHHHHHHHHcEEcccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEEEccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHccccEEEEcHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHccEEEEccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

cccccccHHHHHHHHHHHccEEEcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEHHHccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc

MVETKSPRQEFLLLAYQSFgivfsdlsisplyvykstfsgslrhyqnedavFGAFSVIFWTLTLLSLFKYVIIVLnaddngeggtFSLYALLCRHAKvgllpnhqaadeelttyhdpgyssrnmtsspFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVlqyrgthrvaFMFAPVVILWLLSTtgigiynvikwnprvyqalSPYYIYKFFKytgrdgwtsLAGLFLcttgseamfadlgqfTAGSIKLAFCCIVFPCLVLQYMGQAAflsknfsaaplsfhasipdplrwpVLVVATLAAIVASQSVISATFSTVkqcyalgcfprvkvvhkarwvrgqvyipeINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSacmkipnggwvALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAqgsslgivrvpgIGLLFtelangvpptfthfltnlpaFYQVVVFICVktvplpyvhhkeryligrigpksyRMYRCIVRngykdvpnsgddfenDIVMSIAEFIQMEaegftnldapvdgWLAVVRTSEKFGKRLarsesdskeescsssfpitgscskspalQKLQSMYeqespdlnyrprvqfkltdtkfkDLRVKEELLQLLEAKCAGVSYIIGHSrikakwnapfLKRFVINVAYSFlrknsrspavflniphicLIEVGINYYL

MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTyhdpgyssrnmTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTvplpyvhhkeryligrigpksyRMYRCIVRNgykdvpnsgdDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGkrlarsesdskeescsssfpitgscskSPALQKLQSMYEqespdlnyrprVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSrspavflniphiCLIEVGINYYL

MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTgllllvllgaalvFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPvlvvatlaaivasqsvisaTFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAltfvstlltslvIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARsesdskeescsssFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

*********EFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQA**********************FKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRT*****************************************************PRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYY*

************LLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLP******E********************KVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG********************************************************************************************QLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKF************************SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

*****SPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG********************************************************************YRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		775	2.2.26 [Sep-21-2011]
Q9FE38		775	Potassium transporter 3 O	yes	no	0.997	0.997	0.653	0.0
Q942X8		783	Probable potassium transp	yes	no	0.979	0.969	0.593	0.0
Q8H3P9		811	Potassium transporter 7 O	no	no	0.985	0.942	0.608	0.0
Q5ZC87		808	Probable potassium transp	no	no	0.993	0.952	0.556	0.0
Q9LD18		789	Potassium transporter 4 O	no	no	0.979	0.961	0.577	0.0
Q8W4I4		782	Potassium transporter 6 O	no	no	0.975	0.966	0.487	0.0
Q7XIV8		788	Probable potassium transp	no	no	0.967	0.951	0.472	0.0
Q8VXB5		793	Putative potassium transp	no	no	0.989	0.967	0.491	0.0
O22881		794	Potassium transporter 2 O	no	no	0.978	0.954	0.479	0.0
Q9M7J9		781	Potassium transporter 8 O	no	no	0.962	0.955	0.480	0.0

>sp\|Q9FE38\|POT3_ARATH Potassium transporter 3 OS=Arabidopsis thaliana GN=POT3 PE=1 SV=1	Back alignment and function desciption

 Score = 1050 bits (2715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/777 (65%), Positives = 632/777 (81%), Gaps = 4/777 (0%)

Query: 1   MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFW 60
           M + ++   + LLLAYQSFG+VF DLSISPLYVYK TF G LRH+Q ED +FGAFS+IFW
Sbjct: 1   MADRRNRCNQILLLAYQSFGLVFGDLSISPLYVYKCTFYGGLRHHQTEDTIFGAFSLIFW 60

Query: 61  TLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYS 120
           T+TLLSL KY++ VL+ADDNGEGG F+LYALLCRHA+  LLPN QAADEE++TY+ PG +
Sbjct: 61  TITLLSLIKYMVFVLSADDNGEGGIFALYALLCRHARFSLLPNQQAADEEISTYYGPGDA 120

Query: 121 SRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNR 180
           SRN+ SS FK  +ER+K++KT LL+LVL+G ++V +IGVLTPAISV SSIDGL  +   +
Sbjct: 121 SRNLPSSAFKSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLK 180

Query: 181 HTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQA 240
           H+  VV +AC +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+A
Sbjct: 181 HS-TVVMIACALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKA 239

Query: 241 LSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVL 300
           LSPYYIY FF+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVL
Sbjct: 240 LSPYYIYVFFRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVL 299

Query: 301 QYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYA 360
           QYMGQAAFLSKNFSA P SF++SIPDP  WPVL++A LAA+VASQ+VI ATFS VKQCYA
Sbjct: 300 QYMGQAAFLSKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYA 359

Query: 361 LGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFV 420
           LGCFPRVK+VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM L FV
Sbjct: 360 LGCFPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFV 419

Query: 421 STLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIM 480
           +T L  L+I FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I 
Sbjct: 420 TTWLMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFIT 479

Query: 481 YVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTN 540
           YVWHYGSRK+YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTN
Sbjct: 480 YVWHYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTN 539

Query: 541 LPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFEN 600
           LPAFYQVVVF+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+
Sbjct: 540 LPAFYQVVVFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFED 599

Query: 601 DIVMSIAEFIQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFP 658
           ++VMSIAEFIQ+E+EG+  +N D  +DG LAVV+ S KFG RL+RS S++     S S  
Sbjct: 600 ELVMSIAEFIQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-Q 658

Query: 659 ITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGV 718
            T + SKSPAL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V
Sbjct: 659 TTVTNSKSPALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEV 718

Query: 719 SYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 775
           +YI+GH  +KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct: 719 AYIVGHGHVKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

High-affinity potassium transporter required for tip growth of root hairs.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q5ZC87\|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1	Back alignment and function description

>sp\|Q9LD18\|POT4_ARATH Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2	Back alignment and function description

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

>sp\|Q8VXB5\|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2	Back alignment and function description

>sp\|O22881\|POT2_ARATH Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2	Back alignment and function description

>sp\|Q9M7J9\|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		775
224075034		776	predicted protein [Populus trichocarpa]	1.0	0.998	0.692	0.0
14149030		776	putative high-affinity potassium uptake	1.0	0.998	0.689	0.0
255537637		777	Potassium transporter, putative [Ricinus	1.0	0.997	0.678	0.0
30686261		775	Potassium transporter 3 [Arabidopsis tha	0.997	0.997	0.653	0.0
297799628		775	hypothetical protein ARALYDRAFT_914233 [	0.997	0.997	0.651	0.0
4454033		802	putative potassium transport protein [Ar	0.987	0.953	0.649	0.0
186701236		777	tiny root hair 1 protein [Capsella rubel	0.984	0.981	0.654	0.0
356527658		791	PREDICTED: potassium transporter 3-like	0.998	0.978	0.650	0.0
356513321		790	PREDICTED: potassium transporter 3-like	0.988	0.969	0.657	0.0
225426096		806	PREDICTED: potassium transporter 3-like	1.0	0.961	0.622	0.0

>gi\|224075034\|ref\|XP_002304528.1\| predicted protein [Populus trichocarpa] gi\|222841960\|gb\|EEE79507.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/776 (69%), Positives = 636/776 (81%), Gaps = 1/776 (0%)

Query: 1   MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFW 60
           M E K+ R+  LLLAYQSFGIVFSDLSI PLYVYK TFSG LRHYQNED VFGAFS++FW
Sbjct: 1   MAECKNQRKHVLLLAYQSFGIVFSDLSIPPLYVYKCTFSGRLRHYQNEDTVFGAFSLVFW 60

Query: 61  TLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYS 120
           TLTL SLFKYV  +L A+DNGEGG F+LY+++CRHAK  LLPN QAADEE++TYH  GYS
Sbjct: 61  TLTLFSLFKYVGFMLCANDNGEGGIFALYSVICRHAKFCLLPNQQAADEEISTYHSVGYS 120

Query: 121 SRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNR 180
           +RN+ SS FK F+E HKK KT LL+LVL GAA+  +I + TPAIS+LSS++GLQV+ +N 
Sbjct: 121 NRNVVSSRFKKFVEGHKKMKTALLVLVLFGAAVFITIAIFTPAISILSSVEGLQVRAKNL 180

Query: 181 HTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQA 240
           H  M+V +A  +LIG FVLQ+ G HRVAF+FAP+VILWLLS   +GIYN+IKWNPRVYQA
Sbjct: 181 HHGMLVIIALFLLIGLFVLQHYGMHRVAFIFAPIVILWLLSIAFVGIYNIIKWNPRVYQA 240

Query: 241 LSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVL 300
           LSPYYIYKFF  TG+DGW SL G+ LC TG+E +FA LG FTA SI++AF  +V+PCLVL
Sbjct: 241 LSPYYIYKFFGETGKDGWISLGGILLCITGTEVIFAGLGHFTASSIRVAFSFVVYPCLVL 300

Query: 301 QYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYA 360
           QYMGQAAFLS+NFS+   SFH+SIPD L WPV V+ATLAAIVASQ+V+SATFS  KQC+A
Sbjct: 301 QYMGQAAFLSQNFSSVSTSFHSSIPDSLFWPVTVMATLAAIVASQAVVSATFSIAKQCHA 360

Query: 361 LGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFV 420
           LGCFPR+K+VHK++WV  Q Y+PEINW LMIL LAVTVG +DT  L NAYG AC+   FV
Sbjct: 361 LGCFPRIKIVHKSKWVHRQTYVPEINWALMILCLAVTVGSQDTIHLGNAYGIACITGIFV 420

Query: 421 STLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIM 480
           +T LTS++I FVW+++L +ALLY  FFG IEII++SS+CM+IP GGWV L+ + VF+++M
Sbjct: 421 TTCLTSMIIDFVWHKNLLVALLYFSFFGIIEIIFVSSSCMRIPKGGWVPLVLSAVFMSVM 480

Query: 481 YVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTN 540
           YVWHYGSRK+YLYDLHNK  MKWIL  GS LGIVR+PGIGL++TELA+GVP  F+ F+T+
Sbjct: 481 YVWHYGSRKKYLYDLHNKASMKWILTLGSDLGIVRIPGIGLVYTELASGVPAMFSQFITD 540

Query: 541 LPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGD-DFE 599
           LP FYQVVVFICVKTVP+PYV  KERYLIGRIGPK Y+MYRCIVR GYKDV  + D DFE
Sbjct: 541 LPTFYQVVVFICVKTVPIPYVSQKERYLIGRIGPKPYKMYRCIVRYGYKDVHENDDYDFE 600

Query: 600 NDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPI 659
           N IVMS+AEFIQ+EAEG   LD  VDG LAVVR+SE FGKR   SESD  +ES S S+P 
Sbjct: 601 NAIVMSVAEFIQLEAEGGGTLDGSVDGRLAVVRSSENFGKRFMMSESDGNKESSSWSYPA 660

Query: 660 TGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVS 719
           +GS S+S ALQKL+SMYE ESP+   R R+Q KL DT +KD RVKEE+L+LLEAK AGV+
Sbjct: 661 SGSSSRSAALQKLKSMYELESPEFCNRRRIQLKLLDTTYKDSRVKEEILELLEAKDAGVA 720

Query: 720 YIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 775
           Y+IGHS IKAKWNA F KR +INV  SFLRKN RSP+V LNIPHI LIEVG+NYYL
Sbjct: 721 YVIGHSHIKAKWNATFWKRLLINVFLSFLRKNCRSPSVGLNIPHISLIEVGMNYYL 776

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|14149030\|emb\|CAC39168.1\| putative high-affinity potassium uptake transporter [Populus tremula x Populus tremuloides]	Back alignment and taxonomy information

>gi\|255537637\|ref\|XP_002509885.1\| Potassium transporter, putative [Ricinus communis] gi\|223549784\|gb\|EEF51272.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi|30686261|ref|NP_194095.2| Potassium transporter 3 [Arabidopsis thaliana] gi|38503180|sp|Q9FE38.1|POT3_ARATH RecName: Full=Potassium transporter 3; Short=AtKT3; Short=AtKUP4; Short=AtPOT3; AltName: Full=Tiny root hair 1 protein gi|11181958|emb|CAC16137.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|11181960|emb|CAC16138.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|110741516|dbj|BAE98708.1| potassium transport like protein [Arabidopsis thaliana] gi|332659388|gb|AEE84788.1| Potassium transporter 3 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297799628\|ref\|XP_002867698.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata] gi\|297313534\|gb\|EFH43957.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|4454033\|emb\|CAA23030.1\| putative potassium transport protein [Arabidopsis thaliana] gi\|7269212\|emb\|CAB79319.1\| putative potassium transport protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|186701236\|gb\|ACC91262.1\| tiny root hair 1 protein [Capsella rubella]	Back alignment and taxonomy information

>gi\|356527658\|ref\|XP_003532425.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|356513321\|ref\|XP_003525362.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|225426096\|ref\|XP_002272302.1\| PREDICTED: potassium transporter 3-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		775
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.997	0.997	0.615	1.5e-264
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.979	0.961	0.542	1.3e-224
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.775	0.844	0.496	1e-189
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.967	0.959	0.461	1.7e-187
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.967	0.960	0.461	1.3e-185
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.984	0.960	0.441	4.2e-182
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.774	0.753	0.455	1.3e-156
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.772	0.755	0.448	2.1e-154
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.772	0.724	0.421	5.8e-150
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.771	0.726	0.428	1.6e-145

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2545 (900.9 bits), Expect = 1.5e-264, P = 1.5e-264
 Identities = 478/777 (61%), Positives = 590/777 (75%)

Query:     1 MVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFW 60
             M + ++   + LLLAYQSFG+VF DLSISPLYVYK TF G LRH+Q ED +FGAFS+IFW
Sbjct:     1 MADRRNRCNQILLLAYQSFGLVFGDLSISPLYVYKCTFYGGLRHHQTEDTIFGAFSLIFW 60

Query:    61 TLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYS 120
             T+TLLSL KY++ VL+ADDNGEGG F+LYALLCRHA+  LLPN QAADEE++TY+ PG +
Sbjct:    61 TITLLSLIKYMVFVLSADDNGEGGIFALYALLCRHARFSLLPNQQAADEEISTYYGPGDA 120

Query:   121 SRNMTSSPFKVFMERHKKTKTXXXXXXXXXXXXXFSIGVLTPAISVLSSIDGLQVQLQNR 180
             SRN+ SS FK  +ER+K++KT              +IGVLTPAISV SSIDGL  +   +
Sbjct:   121 SRNLPSSAFKSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLK 180

Query:   181 HTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQA 240
             H+  VV +AC +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+A
Sbjct:   181 HST-VVMIACALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKA 239

Query:   241 LSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVL 300
             LSPYYIY FF+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVL
Sbjct:   240 LSPYYIYVFFRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVL 299

Query:   301 QYMGQAAFLSKNFSAAPLSFHASIPDPLRWPXXXXXXXXXXXXXXXXXXXTFSTVKQCYA 360
             QYMGQAAFLSKNFSA P SF++SIPDP  WP                   TFS VKQCYA
Sbjct:   300 QYMGQAAFLSKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYA 359

Query:   361 LGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAXXXX 420
             LGCFPRVK+VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM     
Sbjct:   360 LGCFPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFV 419

Query:   421 XXXXXXXXIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIM 480
                     I FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I 
Sbjct:   420 TTWLMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFIT 479

Query:   481 YVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTN 540
             YVWHYGSRK+YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTN
Sbjct:   480 YVWHYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTN 539

Query:   541 LPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFEN 600
             LPAFYQVVVF+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+
Sbjct:   540 LPAFYQVVVFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFED 599

Query:   601 DIVMSIAEFIQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARXXXXXXXXXXXXXFP 658
             ++VMSIAEFIQ+E+EG+  +N D  +DG LAVV+ S KFG RL+R               
Sbjct:   600 ELVMSIAEFIQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-Q 658

Query:   659 ITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGV 718
              T + SKSPAL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V
Sbjct:   659 TTVTNSKSPALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEV 718

Query:   719 SYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 775
             +YI+GH  +KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct:   719 AYIVGHGHVKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;IDA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009932 "cell tip growth" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006486 "protein glycosylation" evidence=RCA

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FE38	POT3_ARATH	No assigned EC number	0.6537	0.9974	0.9974	yes	no
Q942X8	HAK2_ORYSJ	No assigned EC number	0.5937	0.9793	0.9693	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_III001115	hypothetical protein (776 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		775
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-137
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	5e-99
TIGR00794		688	TIGR00794, kup, potassium uptake protein	6e-11
COG0531		466	COG0531, PotE, Amino acid transporters [Amino acid	1e-05

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

 Score = 1102 bits (2853), Expect = 0.0
 Identities = 469/768 (61%), Positives = 592/768 (77%), Gaps = 11/768 (1%)

Query: 12  LLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYV 71
           LLLAYQSFG+V+ DLS SPLYVYKSTFSG L+ +QNE+ +FGAFS+IFWT TL+ L KYV
Sbjct: 25  LLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYV 84

Query: 72  IIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKV 131
            I+L+ADDNGEGGTF+LY+LLCRHAK+ LLPN QAADEEL+ Y     S++ + SSP K 
Sbjct: 85  TILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGP-STQTVGSSPLKR 143

Query: 132 FMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACL 191
           F+E+HK+ +T LLL+VL GA +V   GVLTPAISVLSS+ GLQV         +V LAC+
Sbjct: 144 FLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACV 203

Query: 192 VLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFK 251
           +L+G F LQ+ GTHRVAFMFAP+VI+WLLS   IG+YN+I WNP++  ALSPYYI KFF+
Sbjct: 204 ILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFR 263

Query: 252 YTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSK 311
            TG+DGW SL G+ L  TG+EAMFADLG FTA SI+LAF  +++PCLV+QYMGQAAFLSK
Sbjct: 264 VTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSK 323

Query: 312 NFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVH 371
           N  + P SF+ SIPDP+ WPV V+ATLAAIV SQ+VI+ATFS VKQC+ALGCFPRVKVVH
Sbjct: 324 NIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVH 383

Query: 372 KARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYF 431
            ++ + GQ+YIPEINW+LMIL+LAVT+GFRDT  + NAYG ACM + F++T L +LVI F
Sbjct: 384 TSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIF 443

Query: 432 VWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRY 491
           VW +S+ LA L++LFFG IE +YLS+A MK+P GGWV L+ + +F++IMY+WHYG+RK+Y
Sbjct: 444 VWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKY 503

Query: 492 LYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFI 551
            +DLHNKV +KW+L  G SLGIVRVPGIGL+++ELA GVP  F+HF+TNLPAF++V+VF+
Sbjct: 504 NFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFV 563

Query: 552 CVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQ 611
           CVK+VP+PYV  +ER+LIGR+ P+ YRMYRCIVR GYKD+     DFEN +V SIAEFIQ
Sbjct: 564 CVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQ 623

Query: 612 MEAE---GFTNLDAPVDGWLAVVRTSEKFGKRLA-RSESDSKEESCSSSFPITGSCSKSP 667
           MEAE      +  +  DG +AV+ T +     L   SE +        S       SKS 
Sbjct: 624 MEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQE--LADIDDSI----QSSKSL 677

Query: 668 ALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRI 727
            LQ LQS YE E+P  + R RV+F+L +    D  V+EEL+ L+EAK AGV+YI+GHS +
Sbjct: 678 TLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYV 737

Query: 728 KAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 775
           KA+ ++ FLK+  I++ YSFLRKN R PAV LNIPHI LIEVG+ YY+
Sbjct: 738 KARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785

Length = 785

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		775
PLN00148		785	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	92.86
COG0531		466	PotE Amino acid transporters [Amino acid transport	82.3
TIGR00909		429	2A0306 amino acid transporter.	81.53
TIGR03813		474	put_Glu_GABA_T putative glutamate/gamma-aminobutyr	81.15
PRK10435		435	cadB lysine/cadaverine antiporter; Provisional	80.52
PRK10655		438	potE putrescine transporter; Provisional	80.39

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.2e-257  Score=2180.05  Aligned_cols=763  Identities=61%  Similarity=1.058  Sum_probs=694.1

Q ss_pred             chhh---hHHHHHhhcceeecccCcchHHHHHHhcCCCCCCCCCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCC
Q 004072            7 PRQE---FLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEG   83 (775)
Q Consensus         7 ~~~~---~~~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvlSLIfWtLtliv~iKYv~ivL~Adn~GEG   83 (775)
                      +|+.   ++.|||||+|||||||||||||||+++|+++++..+++|||+|+|||||||||||+++|||+|||||||||||
T Consensus        17 ~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GEG   96 (785)
T PLN00148         17 SWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGEG   96 (785)
T ss_pred             hhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCCc
Confidence            5666   7899999999999999999999999999876666799999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhcccCCCCCCCccccccccccCCCCCCCCCCCchhhHhhhhccchhhHHHHHHHHhhhhhhcCccccch
Q 004072           84 GTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPA  163 (775)
Q Consensus        84 G~fALysLl~r~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPA  163 (775)
                      ||||||||+|||+|++++||||++|+++++|++..++.+ +++.++|++||+|+++|.+++++|++|+||+|||||||||
T Consensus        97 G~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPA  175 (785)
T PLN00148         97 GTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPA  175 (785)
T ss_pred             hHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchh
Confidence            999999999999999999999999999999988654443 4567899999999999999999999999999999999999


Q ss_pred             hhhhhhhccceecccCCCcceEehhHHHHHHHHHhhcccccchhhhhhhhHHHHHHHHHhhhhhhhccccCcceeeecCh
Q 004072          164 ISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP  243 (775)
Q Consensus       164 ISVLSAveGl~v~~p~~~~~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~~Wf~~i~~~Giyni~~~~p~Vl~AlnP  243 (775)
                      |||||||||||++.|++++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||
T Consensus       176 ISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP  255 (785)
T PLN00148        176 ISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSP  255 (785)
T ss_pred             HHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCH
Confidence            99999999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCcceeeecchhhhhccchhhhhhccCCCCccceeeehhhhhhhHHHHhcccccchhccCCCccCCccccc
Q 004072          244 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHAS  323 (775)
Q Consensus       244 ~ya~~ff~~~g~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFy~~  323 (775)
                      +|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||++
T Consensus       256 ~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~  335 (785)
T PLN00148        256 YYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDS  335 (785)
T ss_pred             HHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHcCCCCcceEEecCCcccCeeeechhhHHHHHHhheeeEEecCc
Q 004072          324 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDT  403 (775)
Q Consensus       324 iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s  403 (775)
                      +|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||
T Consensus       336 iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s  415 (785)
T PLN00148        336 IPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDT  415 (785)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhhhchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHH
Q 004072          404 NRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW  483 (775)
Q Consensus       404 ~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~i~~~iM~~W  483 (775)
                      ++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|
T Consensus       416 ~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W  495 (785)
T PLN00148        416 TLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIW  495 (785)
T ss_pred             hhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhccccceEEEEEEEEEecccccCC
Q 004072          484 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHH  563 (775)
Q Consensus       484 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~lh~~~vfv~i~~~~vP~V~~  563 (775)
                      |||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||+
T Consensus       496 ~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~  575 (785)
T PLN00148        496 HYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSP  575 (785)
T ss_pred             HHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccCh
Confidence            99999999999999999999999988888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEeecCCCccEEEEEEEeeecccCCCchhhHHHHHHHHHHHHHhhhccCC-C-C-CCCCCCcceeeecccccccc
Q 004072          564 KERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFT-N-L-DAPVDGWLAVVRTSEKFGKR  640 (775)
Q Consensus       564 ~eR~~v~~~~~~~~~~yr~~vryGy~d~~~~~~~F~~~lv~~L~~FIr~E~~~~~-~-~-~~~~~~~~~~~~~~s~~~~~  640 (775)
                      +|||+++|+++++|++|||++||||||.+++++|||++|+++|++|||+|+.+.+ + + .++++++++++++++..+.+
T Consensus       576 ~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  655 (785)
T PLN00148        576 EERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSS  655 (785)
T ss_pred             hheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999988899999999999999999985421 1 1 11113445555433211111


Q ss_pred             cccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCcEE
Q 004072          641 LARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSY  720 (775)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~eEL~~L~~A~eaGVvY  720 (775)
                      ....+.+   +..+..+.. .+. ++.+.++.++.++.++++...+++++|..+++.+.+++++||+++|++|||+||+|
T Consensus       656 ~~~~~~~---~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvY  730 (785)
T PLN00148        656 LLMVSEQ---ELADIDDSI-QSS-KSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAY  730 (785)
T ss_pred             ccccccc---ccccccccc-ccc-cccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEE
Confidence            0000000   000000000 000 11111223333344444445567888876655556788999999999999999999


Q ss_pred             EEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccCCCCEEEeeeEEEC
Q 004072          721 IIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL  775 (775)
Q Consensus       721 IlG~s~vkAr~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~v  775 (775)
                      |+||++||||++|+|+||++||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus       731 IlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V  785 (785)
T PLN00148        731 IMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV  785 (785)
T ss_pred             EeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence            9999999999999999999999999999999999999999999999999999997

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter	Back alignment and domain information

>PRK10435 cadB lysine/cadaverine antiporter; Provisional	Back alignment and domain information

>PRK10655 potE putrescine transporter; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		775
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3lvg_D		190	LCB, clathrin light chain B; SELF assembly, coated	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 71/500 (14%), Positives = 132/500 (26%), Gaps = 141/500 (28%)

Query: 324 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIP 383
           + D  +  +L    +  I+ S+  +S T                +     ++V  +V   
Sbjct: 38  VQDMPK-SILSKEEIDHIIMSKDAVSGTL------RLFWTLLSKQEEMVQKFV-EEVLRI 89

Query: 384 EINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLY 443
              +    L   +    R  + +   Y      L   + +      Y V     +L L  
Sbjct: 90  NYKF----LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK---YNVSRLQPYLKLRQ 142

Query: 444 VLFFGSIEIIYLSSACMKIPNGGWVAL--MFTTVFLAIMYVWHYGSRKRYL-------YD 494
            L              +++     V +  +              GS K ++       Y 
Sbjct: 143 AL--------------LELRPAKNVLIDGVL-------------GSGKTWVALDVCLSYK 175

Query: 495 LHNKVPMK--WILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFIC 552
           +  K+  K  W+     +L     P      T L           L  L   YQ+     
Sbjct: 176 VQCKMDFKIFWL-----NLKNCNSPE-----TVLEM---------LQKL--LYQIDPNWT 214

Query: 553 V-----KTVPLPYVHHKE--RYLIGRIGPKSYRMYRC--IVRNGYKDVPNSG--DDFEND 601
                   + L     +   R L+     K Y    C  ++     +V N+   + F   
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKS---KPYE--NCLLVLL----NVQNAKAWNAFNLS 265

Query: 602 --IVM-----SIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCS 654
             I++      + +F+        +LD      L          K L     D   E  +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 655 SSFP-----ITGSCSKSPA---------LQKLQSM----YEQESPDLNYRPR-VQFKLTD 695
           ++ P     I  S     A           KL ++         P   YR    +  +  
Sbjct: 325 TN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-- 380

Query: 696 TKF-KDLRVKEELLQLL--EAKCAGVSYIIGHSRIK---AKWNAPFLKRFVINVAY-SFL 748
             F     +   LL L+  +   + V  ++          K          I   Y    
Sbjct: 381 --FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES--TISIPSIYLELK 436

Query: 749 RKNSRSPAVFLNIPHICLIE 768
            K     A+     H  +++
Sbjct: 437 VKLENEYAL-----HRSIVD 451

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		775
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.58
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.44
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	95.74

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=96.58  E-value=0.055  Score=59.53  Aligned_cols=98  Identities=15%  Similarity=0.175  Sum_probs=54.0

Q ss_pred             EehhHHHHHHHHHhhcccccchhhhhhhhH----HHHHHHHHhhhhhhhccccCccee----eecChHHHHHHHHhcCcc
Q 004072          185 VVFLACLVLIGHFVLQYRGTHRVAFMFAPV----VILWLLSTTGIGIYNVIKWNPRVY----QALSPYYIYKFFKYTGRD  256 (775)
Q Consensus       185 Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPI----m~~Wf~~i~~~Giyni~~~~p~Vl----~AlnP~ya~~ff~~~g~~  256 (775)
                      ...+++++++++..+.-+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            456778888888899999988777654332    222344555667666554333221    1222211       1234


Q ss_pred             eeeecchhhhhccchhhhhhccCCCC--ccceeee
Q 004072          257 GWTSLAGLFLCTTGSEAMFADLGQFT--AGSIKLA  289 (775)
Q Consensus       257 g~~~LG~V~L~iTGaEALyADlGHFg--~~~Ir~a  289 (775)
                      +|..+..++.+.+|-|+.-.=-+-.-  +|.+..|
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~a  237 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLA  237 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHH
Confidence            56677888999999998644333332  3444444

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00