Citrus Sinensis ID: 004183

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770
Protein Sequence
MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSILGFL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccccccEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHccccEEEcccHHHHHHHHHcccccccccHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccHHHHHHHHccccccHHHHHHHHHHcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccHHHHccccccccccccHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccEEcccccccccHHEEEEHHHHHHHHccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEEccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccccccccccEEEEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccHEEEEEEccHHHHHHHHHHHHcccHEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHccHHHEEccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccHHHHEEEccccccccc
Coil and Loop (DISEMBL)
masanttpspllppqtdvssslattatattddvASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLepilvrhpetnlpkavklKCSLCdavfsasnpsrtasehlkrgtcpnfaavlkphslsplplssfaaspppvhvtnngngngnrkrsknqtqartgninnnsLAIVEstqsphlvlsggredlGALAMLEDSVKKlkspktrpgpvlskdQIDSAVELLTDwfydscgsvsfssfdhpkFRAFLSqvglpvvsrkEVLDARLDRKFVEAKTESEIRIREAMFFQVASdgwkirtccgdgdddnlvkftvnlpngtsVYQKALItggsvssklAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDfgkelpvftSVRETCLKIgnfvnnkpqirSSLRKHKMVGLEYVELirvpsnkcdcrnnFVHLFGMLEDVWSSARVLQMAVLDDsikvscmddpvsREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAerpligqclPLWEELRSKVKNWCakfsipgenVEKIVEKRFrknyhpawsaafildplylikdnsgkylppfkclteeqEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKqrdpitgkmrianpqssrLVWETCLSEYKSLGKVAVRLIFLHATsfgfkcnwSFMKWYCVQRHSRASLERAQKMIFVAAHAKLekrdfsneeekDAELfatsgceddmLNEVFADASSILGFL
Flexible Loop (DISEMBL)
masanttpspllppqtdvSSSLAttatattddvaskavnkryegLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASnpsrtasehlkRGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHvtnngngngnrkrsKNQTQARTGNINNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKklkspktrpgpvlskdqIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFlsqvglpvvsrkevldarldrkfveakteseirirEAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLkignfvnnkpqirssLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWcakfsipgenvEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVkqrdpitgkmrianpqssrlVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKlekrdfsneeeKDAELFATSGCEDDMLNEVFADASSILGFL
Low Complexity Region (SEG)
MASANTTPSPLLPPQtdvssslattatattddvaskavNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHslsplplssfaaspppVHVTnngngngnRKRSKNQTQARTGNINNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSILGFL
Disordered region (IsUnstruct)
************************************AVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFS*******************FAAV****************************************************************************************************IDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHA***************************LNEVF**********
Disordered Region (DISOPRED)
********************************************LMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNP**************************************************************************************************************************AVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHA****************LFATSGCEDDMLNEVFADASSILGFL
Disordered Region (DISEMBL)
*************************ATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSAS***********RGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHVTNNGNG***********QARTGNINNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKK***********LSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSILGFL
Disordered Region (DISPRO)
*****************************TDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFS***************T*PNFA*************************************************NNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKKLKSPK*R*GPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSILGFL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSILGFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	770
225455551	762	PREDICTED: uncharacterized protein LOC10	0.954	0.964	0.669	0.0
147807584	762	hypothetical protein VITISV_034344 [Viti	0.954	0.964	0.669	0.0
255539697	762	conserved hypothetical protein [Ricinus	0.940	0.950	0.678	0.0
224120218	751	predicted protein [Populus trichocarpa]	0.933	0.957	0.690	0.0
224136802	751	predicted protein [Populus trichocarpa]	0.933	0.957	0.687	0.0
449451940	817	PREDICTED: uncharacterized protein LOC10	0.961	0.905	0.637	0.0
225470299	758	PREDICTED: uncharacterized protein LOC10	0.972	0.988	0.625	0.0
224124932	762	predicted protein [Populus trichocarpa]	0.946	0.956	0.623	0.0
449459674	776	PREDICTED: uncharacterized protein LOC10	0.950	0.943	0.629	0.0
255537111	792	conserved hypothetical protein [Ricinus	0.961	0.934	0.616	0.0

>gi|225455551|ref|XP_002268183.1| PREDICTED: uncharacterized protein LOC100266895 [Vitis vinifera]

 Score = 1075 bits (2779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/793 (66%), Positives = 628/793 (79%), Gaps = 58/793 (7%)

Query: 1   MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWY 60
           MA+ N+TP                  +++ D+ A+KA++KRYEGL+ VRTKAIKGKGAWY
Sbjct: 1   MATPNSTP----------------IDSSSGDEAAAKAMHKRYEGLVTVRTKAIKGKGAWY 44

Query: 61  WVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHS 120
           W HLEPILV +P+T LPKAVKLKCSLC+AVFSASNPSRTASEHLKRGTCPNF++ L+P S
Sbjct: 45  WAHLEPILVPNPDTGLPKAVKLKCSLCEAVFSASNPSRTASEHLKRGTCPNFSSALRPIS 104

Query: 121 -LSPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVES------- 172
            +SP      + + PP H         +RKRS +   A + + + +SLA+V+S       
Sbjct: 105 TVSP------SLALPPSH--------NHRKRSAHMG-APSSSYHVSSLAMVDSPRFCGEL 149

Query: 173 -------TQSP------------HLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSK 213
                   Q+P             LVLSGG+EDLGALAMLEDSVK+LKSPK  PGP LSK
Sbjct: 150 GYSSPPPVQNPVGSGGEKVLSHHQLVLSGGKEDLGALAMLEDSVKRLKSPKASPGPELSK 209

Query: 214 DQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEA 273
           +QI+SA+ELL DWFY+SCGSVSFSS +HPKF+AFL+QVGLP VSR+E   ARLD KF EA
Sbjct: 210 EQINSALELLADWFYESCGSVSFSSLEHPKFQAFLNQVGLPSVSRREFSGARLDTKFDEA 269

Query: 274 KTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVS 333
           K ESE RIR+AMFFQVASDGW  +       ++NLVKFTVNLPNGTSV+QKA+ TGGSV 
Sbjct: 270 KIESEARIRDAMFFQVASDGWNSKNFGFSSGEENLVKFTVNLPNGTSVFQKAVFTGGSVP 329

Query: 334 SKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLL 393
           SK AE++ WET+ GICG+ VQRCVGIVADKYKAKALRNLE QN WMVN+SCQLQGF+SL+
Sbjct: 330 SKHAEEILWETITGICGSVVQRCVGIVADKYKAKALRNLEIQNHWMVNLSCQLQGFISLI 389

Query: 394 KDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNN 453
           KDF KELP+F+ V E CLK+ NF+N K Q+R S  K ++  L++V L+RVP +KCD   N
Sbjct: 390 KDFSKELPLFSIVTEKCLKLANFINIKSQVRHSFHKFQLQELDHVGLLRVPPSKCDNMKN 449

Query: 454 FVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLV 513
           FVH++ MLED+ S+A+VLQ+ V+D+S KV C++DP +REV  +IQ   FWNEL+AV+SLV
Sbjct: 450 FVHVYAMLEDIMSNAQVLQLVVMDESYKVICVEDPAAREVADMIQDVRFWNELDAVHSLV 509

Query: 514 KLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPA 573
           KLI+ M QEIE ERPL+GQCLPLWEELR+KV+ WC KF+I  E VEKIVEKRFRKNYHPA
Sbjct: 510 KLIREMAQEIEVERPLVGQCLPLWEELRTKVREWCVKFNIDEEPVEKIVEKRFRKNYHPA 569

Query: 574 WSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRS 633
           WSAAFILDP YL++D SGKYLPPFKCLT EQEKDVDKLITRLV+REEAH ALMELMKWRS
Sbjct: 570 WSAAFILDPFYLMRDTSGKYLPPFKCLTHEQEKDVDKLITRLVTREEAHIALMELMKWRS 629

Query: 634 EGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSF 693
           EGLDPLYAQAVQVKQ+DP+TGKM+IANPQSSRLVWETCL ++KSLGKVAVRLIFLHAT+ 
Sbjct: 630 EGLDPLYAQAVQVKQQDPVTGKMKIANPQSSRLVWETCLKDFKSLGKVAVRLIFLHATAC 689

Query: 694 GFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCED 753
           GFKCNWSFM+W CV  HSR  L+RAQKMIF+AAHAKLE+RDFS+EEEKDAELFA +  E 
Sbjct: 690 GFKCNWSFMRWVCVHGHSRVGLDRAQKMIFIAAHAKLERRDFSSEEEKDAELFAMANGES 749

Query: 754 DMLNEVFADASSI 766
           DMLNEVFADA S+
Sbjct: 750 DMLNEVFADAPSV 762

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147807584|emb|CAN75358.1| hypothetical protein VITISV_034344 [Vitis vinifera]

 Score = 1073 bits (2776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/793 (66%), Positives = 627/793 (79%), Gaps = 58/793 (7%)

Query: 1   MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWY 60
           MA+ N+TP                  +++ D+ A+KA++KRYEGL+ VRTKAIKGKGAWY
Sbjct: 1   MATPNSTP----------------IDSSSGDEAAAKAMHKRYEGLVTVRTKAIKGKGAWY 44

Query: 61  WVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHS 120
           W HLEPILV +P+T LPKAVKLKCSLC+AVFSASNPSRTASEHLKRGTCPNF++ L+P S
Sbjct: 45  WAHLEPILVPNPDTGLPKAVKLKCSLCEAVFSASNPSRTASEHLKRGTCPNFSSALRPIS 104

Query: 121 -LSPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVES------- 172
            +SP      + + PP H         +RKRS +   A + + + +SLA+V+S       
Sbjct: 105 TVSP------SLALPPSH--------NHRKRSAHMG-APSSSYHVSSLAMVDSPRFCGEL 149

Query: 173 -------TQSP------------HLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSK 213
                   Q+P             LVLSGG+EDLGALAMLEDSVK+LKSPK  PGP LSK
Sbjct: 150 GYSSPPPVQNPVGSGGEKVLSHHQLVLSGGKEDLGALAMLEDSVKRLKSPKASPGPELSK 209

Query: 214 DQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEA 273
           +QI+SA+ELL DWFY+SCGSVSFSS +HPKF+AFL+QVGLP VSR+E   ARLD KF EA
Sbjct: 210 EQINSALELLADWFYESCGSVSFSSLEHPKFQAFLNQVGLPSVSRREFSGARLDTKFDEA 269

Query: 274 KTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVS 333
           K ESE RIR+AMFFQVASDGW  +       + NLVKFTVNLPNGTSV+QKA+ TGGSV 
Sbjct: 270 KIESEARIRDAMFFQVASDGWNSKNFGFSSGEXNLVKFTVNLPNGTSVFQKAVFTGGSVP 329

Query: 334 SKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLL 393
           SK AE++ WET+ GICG+ VQRCVGIVADKYKAKALRNLE QN WMVN+SCQLQGF+SL+
Sbjct: 330 SKHAEEILWETITGICGSVVQRCVGIVADKYKAKALRNLEIQNHWMVNLSCQLQGFISLI 389

Query: 394 KDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNN 453
           KDF KELP+F+ V E CLK+ NF+N K Q+R S  K ++  L++V L+RVP +KCD   N
Sbjct: 390 KDFSKELPLFSIVTEKCLKLANFINIKSQVRHSFHKFQLQELDHVGLLRVPPSKCDNMKN 449

Query: 454 FVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLV 513
           FVH++ MLED+ S+A+VLQ+ V+D+S KV C++DP +REV  +IQ   FWNEL+AV+SLV
Sbjct: 450 FVHVYAMLEDIMSNAQVLQLVVMDESYKVICVEDPAAREVADMIQDVRFWNELDAVHSLV 509

Query: 514 KLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPA 573
           KLI+ M QEIE ERPL+GQCLPLWEELR+KV+ WC KF+I  E VEKIVEKRFRKNYHPA
Sbjct: 510 KLIREMAQEIEVERPLVGQCLPLWEELRTKVREWCVKFNIDEEPVEKIVEKRFRKNYHPA 569

Query: 574 WSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRS 633
           WSAAFILDP YL++D SGKYLPPFKCLT EQEKDVDKLITRLV+REEAH ALMELMKWRS
Sbjct: 570 WSAAFILDPFYLMRDTSGKYLPPFKCLTHEQEKDVDKLITRLVTREEAHIALMELMKWRS 629

Query: 634 EGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSF 693
           EGLDPLYAQAVQVKQ+DP+TGKM+IANPQSSRLVWETCL ++KSLGKVAVRLIFLHAT+ 
Sbjct: 630 EGLDPLYAQAVQVKQQDPVTGKMKIANPQSSRLVWETCLKDFKSLGKVAVRLIFLHATAC 689

Query: 694 GFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCED 753
           GFKCNWSFM+W CV  HSR  L+RAQKMIF+AAHAKLE+RDFS+EEEKDAELFA +  E 
Sbjct: 690 GFKCNWSFMRWVCVHGHSRVGLDRAQKMIFIAAHAKLERRDFSSEEEKDAELFAMANGES 749

Query: 754 DMLNEVFADASSI 766
           DMLNEVFADA S+
Sbjct: 750 DMLNEVFADAPSV 762

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539697|ref|XP_002510913.1| conserved hypothetical protein [Ricinus communis] gi|223550028|gb|EEF51515.1| conserved hypothetical protein [Ricinus communis]

 Score = 1071 bits (2769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/758 (67%), Positives = 618/758 (81%), Gaps = 34/758 (4%)

Query: 31  DDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAV 90
           +D A+KAVNKRYEGL+ +RTKA+KGKGAWYW HLEPIL+R+ +TN+PKAVKL+CSLCDAV
Sbjct: 17  EDTAAKAVNKRYEGLITIRTKAVKGKGAWYWAHLEPILIRNTDTNIPKAVKLRCSLCDAV 76

Query: 91  FSASNPSRTASEHLKRGTCPNFAAVLKPHSL--SPLPLSSFAASPPPVHVTNNGNGNGNR 148
           FSASNPSRTASEHLKRGTCPNF +VL+P+S+  SPLP+SS    P P       + N +R
Sbjct: 77  FSASNPSRTASEHLKRGTCPNFNSVLRPNSIVSSPLPISSL---PSPT-----SHHNHHR 128

Query: 149 KRSKNQTQARTGNINNNSLAIVESTQ-------------------SPHLVLSGGREDLGA 189
           KRS +   +    +N  SLAIVEST+                     HL+LSGG++DL A
Sbjct: 129 KRSSHMATSTATPLN--SLAIVESTRFCNELGYSNSGLLSQQQQHHQHLMLSGGKDDLDA 186

Query: 190 LAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLS 249
           LAMLE+S+KKLKSPK  PGP L+KDQIDSA+ELL DWFY++CGSVSFSS +HPKFR+FL 
Sbjct: 187 LAMLENSIKKLKSPKASPGPSLNKDQIDSALELLADWFYETCGSVSFSSLEHPKFRSFLH 246

Query: 250 QVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLV 309
           QVGLP +SRK++  +RL+ +F+EAKTE E R R+AMFFQVA +GWK + CC    ++NLV
Sbjct: 247 QVGLPPLSRKDLSGSRLENRFLEAKTEVETRTRDAMFFQVACNGWKTKNCCNG--EENLV 304

Query: 310 KFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGN-GVQRCVGIVADKYKAKA 368
           KF++NLPN TS+YQKA++TGGSVSSK AE++ WE VM +CG+  +QRCVGI+ADKYKAKA
Sbjct: 305 KFSINLPNRTSLYQKAVLTGGSVSSKYAEEIMWEAVMSLCGSSALQRCVGIIADKYKAKA 364

Query: 369 LRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLR 428
           LRNLE Q QWMVN+SCQ+QG LSL+ DF KEL +F +  E CLK+ NFVNNK Q+RSS +
Sbjct: 365 LRNLEIQYQWMVNLSCQVQGLLSLINDFCKELSIFKTATENCLKLANFVNNKSQVRSSFQ 424

Query: 429 KHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDP 488
           K+++  LEY  L+R PS+KC+CR +F+ ++ MLED+ S ARVL M V D+S K   M+D 
Sbjct: 425 KYRLQELEYNRLLRAPSSKCECRKDFLPVYLMLEDILSCARVLHMVVCDESYKAMSMEDS 484

Query: 489 VSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWC 548
           +++EV  +IQ E FWN+LEAVYSL+KLI+G+  EIE ERPLIGQCLPLWE+L++KVK+W 
Sbjct: 485 LAKEVSGMIQGEGFWNQLEAVYSLMKLIRGIAHEIEVERPLIGQCLPLWEDLKAKVKDWS 544

Query: 549 AKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDV 608
           A+F+I   +VEKIVEKRF+KNYHPAWSAAFILDPLYL++D SGKYLPPFKCLT EQEKDV
Sbjct: 545 ARFNIVDGHVEKIVEKRFKKNYHPAWSAAFILDPLYLMRDTSGKYLPPFKCLTHEQEKDV 604

Query: 609 DKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVW 668
           DKLITRLVSREEAH ALMELMKWR+EGLDPLYAQAVQVKQRDP+TGKM+IANPQ SRLVW
Sbjct: 605 DKLITRLVSREEAHVALMELMKWRTEGLDPLYAQAVQVKQRDPLTGKMKIANPQGSRLVW 664

Query: 669 ETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHA 728
           ETCLSEYK+LGKVAVRLIFL ATS GFKCNWS M+W C+ RHSR  LERAQKMIFVAAH+
Sbjct: 665 ETCLSEYKTLGKVAVRLIFLQATSCGFKCNWSSMEWMCMHRHSRIGLERAQKMIFVAAHS 724

Query: 729 KLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           KLE+RDF NEEEKD ELF  +GCEDDMLNEVF D  S+
Sbjct: 725 KLERRDFLNEEEKDGELFRMAGCEDDMLNEVFTDTPSV 762

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120218|ref|XP_002318275.1| predicted protein [Populus trichocarpa] gi|222858948|gb|EEE96495.1| predicted protein [Populus trichocarpa]

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/752 (69%), Positives = 609/752 (80%), Gaps = 33/752 (4%)

Query: 31  DDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAV 90
           DD A +AVNKRYEGL+ V+TKAIKGKGAWYW HL+PIL+++P+TNLPKAVKLKC LC+AV
Sbjct: 17  DDTAIRAVNKRYEGLVTVKTKAIKGKGAWYWAHLDPILMKNPDTNLPKAVKLKCCLCEAV 76

Query: 91  FSASNPSRTASEHLKRGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHVTNNGNGNGNRKR 150
           FSASNPSRTA+EHLK+GTCPNF +V +P+S         A SP P+    +   N +RKR
Sbjct: 77  FSASNPSRTATEHLKKGTCPNFVSVSRPNS---------AISPLPISSLPSPPSNNHRKR 127

Query: 151 SKNQTQARTGNINNNSLAIVESTQ---------------SPHLVLSGGREDLGALAMLED 195
           S     A        SLA+VES +                  LVLSGG+EDLGALAMLED
Sbjct: 128 SSQIGTAL------KSLALVESNKYCDQVGYFNSGFTPKGQDLVLSGGKEDLGALAMLED 181

Query: 196 SVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPV 255
           SVK+LKSPK  PGP+L+KDQIDSA+ELL+DWFY+ CGSVSFSS +HP FRAFL+QVGLP 
Sbjct: 182 SVKRLKSPKASPGPLLNKDQIDSALELLSDWFYEVCGSVSFSSLEHPTFRAFLNQVGLPC 241

Query: 256 VSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNL 315
           +SR+E+  ARL+ +F EAK+E E RIR+AMFFQVA +GWK   CC    +DNLVKF VNL
Sbjct: 242 LSRRELSGARLENRFYEAKSEVEARIRDAMFFQVACNGWKSNKCCSG--EDNLVKFGVNL 299

Query: 316 PNGTSVYQKALITGG-SVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLET 374
           PNGTSV+ KA+ITGG + SSK AE++ W  V GICG+G+QRC GIV+DKYKA+ALRNLE 
Sbjct: 300 PNGTSVFHKAVITGGGTASSKYAEEIMWGAVTGICGSGLQRCAGIVSDKYKAEALRNLEI 359

Query: 375 QNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVG 434
           Q  WMVN+SCQ+QGF+SL+KDF KEL +F +V E CLK+ NFVNN  Q+RSS +K++M  
Sbjct: 360 QYPWMVNISCQIQGFVSLIKDFSKELQLFRTVIENCLKLANFVNNASQVRSSFQKYRMQE 419

Query: 435 LEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVV 494
           L+Y  L+RVP  KCDC  +F  ++ MLEDV S ARVLQM +LD+S K+ C++DPV+REV 
Sbjct: 420 LDYTGLLRVPWCKCDCVKDFAPVYAMLEDVLSCARVLQMVILDESYKLICVEDPVAREVS 479

Query: 495 AIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIP 554
            +IQSE FWN+LEAVYSL+KLI+GM QEIE ERPLIG+CLPLW+EL++KVK+W A+F+I 
Sbjct: 480 GMIQSEGFWNDLEAVYSLMKLIRGMAQEIETERPLIGECLPLWQELKAKVKDWGARFNIA 539

Query: 555 GENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITR 614
              VEKIVEKRFRKNYHPAWSAAFILDP YL++D SGKYLPPFKCLT EQEKDVDKLITR
Sbjct: 540 EGQVEKIVEKRFRKNYHPAWSAAFILDPRYLMRDTSGKYLPPFKCLTHEQEKDVDKLITR 599

Query: 615 LVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSE 674
           L SREEAH ALMELMKWRSEG+DPLYAQAVQVKQRDP+TGKM+IANPQ SRLVWETCLSE
Sbjct: 600 LASREEAHVALMELMKWRSEGMDPLYAQAVQVKQRDPLTGKMKIANPQGSRLVWETCLSE 659

Query: 675 YKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRD 734
           YK+LGKVAVRLIFLHATS GFKCNWS MKW+C+ R+SR  LERAQKMIFVAAHAKLEKRD
Sbjct: 660 YKTLGKVAVRLIFLHATSSGFKCNWSCMKWFCIHRNSRVGLERAQKMIFVAAHAKLEKRD 719

Query: 735 FSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           FSNEEEKD ELF   GCEDDMLNEVF +A S+
Sbjct: 720 FSNEEEKDGELFRMVGCEDDMLNEVFVEAPSV 751

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136802|ref|XP_002322419.1| predicted protein [Populus trichocarpa] gi|222869415|gb|EEF06546.1| predicted protein [Populus trichocarpa]

 Score = 1058 bits (2735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/752 (68%), Positives = 610/752 (81%), Gaps = 33/752 (4%)

Query: 31  DDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAV 90
           +D A +AVNKRYEGL+ V+TKAIKGKGAWYW HLEPIL+++P+TNLPKAVKLKC LC+AV
Sbjct: 17  EDTAIRAVNKRYEGLITVKTKAIKGKGAWYWAHLEPILIKNPDTNLPKAVKLKCCLCEAV 76

Query: 91  FSASNPSRTASEHLKRGTCPNFAAVLKPHSLSPLPLSSFAASPPPVHVTNNGNGNGNRKR 150
           FSASNPSRTA+EHLK+GTC NF +V +P+S         A SP P+    +   N +RKR
Sbjct: 77  FSASNPSRTATEHLKKGTCSNFVSVSRPNS---------AISPLPISSLPSPPSNNHRKR 127

Query: 151 SKNQTQARTGNINNNSLAIVES--------------TQSPH-LVLSGGREDLGALAMLED 195
           S     A        SLA+VES              T   H LVLSGG+EDLGALAMLED
Sbjct: 128 SSQMGTAL------KSLALVESNKYCDQVGYFNSGFTPKGHDLVLSGGKEDLGALAMLED 181

Query: 196 SVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPV 255
           SVK+LKSPK  PGP+L+K+Q+DSA+ELL+DWFY+ CGSVS+SS +HPKFRAFL+QVGLP 
Sbjct: 182 SVKRLKSPKASPGPLLNKEQVDSALELLSDWFYEVCGSVSYSSLEHPKFRAFLNQVGLPC 241

Query: 256 VSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNL 315
           +SR+ +  ARLD +F EAK+E E RIR+AMFFQVA +GWK   CC    +DNLVKF+VNL
Sbjct: 242 LSRRGLSGARLDNRFHEAKSEVEARIRDAMFFQVACNGWKSNNCCSG--EDNLVKFSVNL 299

Query: 316 PNGTSVYQKALITGG-SVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLET 374
           PNGT +Y KA++TGG SVSSK AE++ WE V GICG+G+QRCVGIV+D+YKA+ALRNLE 
Sbjct: 300 PNGTILYHKAVLTGGGSVSSKYAEEIMWEAVTGICGSGLQRCVGIVSDEYKAEALRNLEI 359

Query: 375 QNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVG 434
           Q QWMVN+ CQ+QGF SL+KDF KE  +F +V E CLK+ NFVNN  Q+R+S +K++M  
Sbjct: 360 QYQWMVNLPCQVQGFTSLIKDFSKEHQLFKTVTENCLKLANFVNNTSQVRNSFQKYRMQE 419

Query: 435 LEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVV 494
           L+Y  L+RVP  KCD   +FV ++ MLED+ S ARVLQM +LD+S K+  ++DPV+REV 
Sbjct: 420 LDYTGLLRVPWCKCDGAKDFVPVYAMLEDILSCARVLQMVILDESYKLMSVEDPVAREVS 479

Query: 495 AIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIP 554
            +IQSE FWNELEAVYSL+KLI+GM QEIEAERPLIG CLPLW+EL++KVK WCA+F+I 
Sbjct: 480 GMIQSEGFWNELEAVYSLMKLIRGMAQEIEAERPLIGHCLPLWQELKAKVKEWCARFNIA 539

Query: 555 GENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITR 614
              VEKIVEKRFRKNYHPAWSAAFILDP YL++D SGKYLPPFKCLT EQEKDVDKLITR
Sbjct: 540 EGQVEKIVEKRFRKNYHPAWSAAFILDPRYLMRDTSGKYLPPFKCLTLEQEKDVDKLITR 599

Query: 615 LVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSE 674
           L SREEAH ALMELMKWRS+GLDPLYAQAVQVKQRDP+TGKM+IANPQ SRLVWETCLSE
Sbjct: 600 LASREEAHVALMELMKWRSDGLDPLYAQAVQVKQRDPLTGKMKIANPQGSRLVWETCLSE 659

Query: 675 YKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRD 734
           YK+LGKVAVRLIFLHATS GFKCNWS MKW+CV R+SR  LERAQKMIF+AAHAKLE+RD
Sbjct: 660 YKTLGKVAVRLIFLHATSSGFKCNWSSMKWFCVHRNSRVGLERAQKMIFIAAHAKLERRD 719

Query: 735 FSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           FSNEEEKD ELF  +GCEDDMLNEVF +A S+
Sbjct: 720 FSNEEEKDGELFRMAGCEDDMLNEVFVEAPSV 751

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451940|ref|XP_004143718.1| PREDICTED: uncharacterized protein LOC101211175 [Cucumis sativus] gi|449488673|ref|XP_004158139.1| PREDICTED: uncharacterized LOC101211175 [Cucumis sativus]

 Score = 1021 bits (2639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/795 (63%), Positives = 611/795 (76%), Gaps = 55/795 (6%)

Query: 1   MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWY 60
           MAS N+      PP  D        A+  T+D+A+KA+NKRYE L+ VRTKAIKGKGAWY
Sbjct: 1   MASTNS------PPNID--------ASTLTEDLATKALNKRYECLVTVRTKAIKGKGAWY 46

Query: 61  WVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHS 120
           W HLEP+L+R+P  +LPKAVKLKCSLCD+VFSASNPSRTASEHLKRGTCPN +++ +  +
Sbjct: 47  WAHLEPVLIRNPTNSLPKAVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNLSSISRSIA 106

Query: 121 LS--PLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVESTQS--- 175
            +  PLP+SS  +  P +H       N  ++ S+      T +   +SLA++E T+S   
Sbjct: 107 SAASPLPISSIPS--PTLH-------NHKKRSSQMNAPILTASYQVHSLAMIEPTRSYAP 157

Query: 176 ------------------------PHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVL 211
                                     LVLSGG++DLGAL MLE+SVKKLKSP   PGP L
Sbjct: 158 LISSPPTPGAQNSVGMASKMGFNQHQLVLSGGKDDLGALEMLENSVKKLKSPHASPGPRL 217

Query: 212 SKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFV 271
           SK+QIDSA+ELLTDWF +SCGSVS S FDHPKF+A LSQ+GLP + R ++L ARLD KF 
Sbjct: 218 SKEQIDSAIELLTDWFIESCGSVSLSCFDHPKFKALLSQLGLPSLPRTDILGARLDSKFE 277

Query: 272 EAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGS 331
           EAK +SE RIR+A FFQ+ASDGWK + CC   D++++VKF VNLPNGT+V+QKAL TGG 
Sbjct: 278 EAKADSEARIRDAAFFQIASDGWKNKNCC---DEESVVKFMVNLPNGTTVFQKALFTGGL 334

Query: 332 VSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLS 391
           VSSK AE+V  +TV  ICG+G+Q+CVGI+AD+YKAKALRNLE +N WMVN+SCQLQGF+S
Sbjct: 335 VSSKYAEEVILDTVNEICGSGLQKCVGIIADRYKAKALRNLEIKNHWMVNLSCQLQGFIS 394

Query: 392 LLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCR 451
           L+KDF KELP+F +V E CLK+ NFVN K Q+R+ + K+K+  LE   L+ VPS  CD  
Sbjct: 395 LIKDFNKELPLFRAVTENCLKVANFVNTKSQVRNCINKYKVQELEGHWLLHVPSPNCDTS 454

Query: 452 NNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYS 511
            NF  ++ ML+D+ + A VLQM VLD+S KV+CM+D ++ EV ++IQ+E FW+ELEAV+S
Sbjct: 455 KNFSPVYSMLDDMLNCAHVLQMVVLDESYKVACMEDSLATEVSSLIQNERFWDELEAVHS 514

Query: 512 LVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYH 571
            VK+I+ M QEIEAERPLIGQCLPLWEELR+KVK WC KFSI  E VEKIVEKRFRKNYH
Sbjct: 515 FVKMIRVMAQEIEAERPLIGQCLPLWEELRTKVKEWCVKFSIAEEPVEKIVEKRFRKNYH 574

Query: 572 PAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKW 631
           PAWS AFILDPLYL +D +GKYLPPFKCL++EQEKDVD LI RLVSREEAH A MELMKW
Sbjct: 575 PAWSTAFILDPLYLRRDMNGKYLPPFKCLSQEQEKDVDSLINRLVSREEAHLAFMELMKW 634

Query: 632 RSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHAT 691
           RSEGLDPLYAQAVQVKQRDP+TGKM+IANPQS RLVWETCLS +K+LGKVA+RLIFLH+T
Sbjct: 635 RSEGLDPLYAQAVQVKQRDPLTGKMKIANPQSRRLVWETCLSGFKTLGKVALRLIFLHST 694

Query: 692 SFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGC 751
           S GFKC  S M   C  RHSR  LERAQKM+FVAAHAKLE+ DFSNEE+KDAELFA +  
Sbjct: 695 SCGFKCKCSIMNLVCSNRHSRVGLERAQKMVFVAAHAKLERGDFSNEEDKDAELFAMADG 754

Query: 752 EDDMLNEVFADASSI 766
           E+DMLNEVF+DA SI
Sbjct: 755 ENDMLNEVFSDAPSI 769

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470299|ref|XP_002266405.1| PREDICTED: uncharacterized protein LOC100253287 [Vitis vinifera]

 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/775 (62%), Positives = 599/775 (77%), Gaps = 26/775 (3%)

Query: 1   MASANTTPSPLLPPQTDVSSSLATTATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWY 60
           MA+ NTTP        D SS+         +++ +KAV+KRYEGL+MVRTKAIKGKGAWY
Sbjct: 1   MAATNTTPP------IDSSSA---------EELTAKAVHKRYEGLVMVRTKAIKGKGAWY 45

Query: 61  WVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHS 120
           W HLEP+LV + +T LPKAVKL+CSLC+AVFSASNPSRTASEHLKRGTCPNF +V KP S
Sbjct: 46  WAHLEPLLVHNNDTGLPKAVKLRCSLCEAVFSASNPSRTASEHLKRGTCPNFNSVPKPIS 105

Query: 121 LSPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGNINNNSLAIVESTQ------ 174
                  +  +S    +     + +             + +   + LA+V+ ++      
Sbjct: 106 SISPSSMASPSSSVQHNHRKRSSSSSGGGGGGVGGGGSSASYQVSPLAMVDPSRFCGELA 165

Query: 175 -SP--HLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSC 231
            SP  HL+LSGG+EDLGALAMLEDSVKKLKSPKT PGP LSK QIDSA + L DW Y+SC
Sbjct: 166 YSPAQHLMLSGGKEDLGALAMLEDSVKKLKSPKTSPGPALSKTQIDSAFDFLADWLYESC 225

Query: 232 GSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVAS 291
           GSVSFSS DHPKFRAFL+QVGLP +SR+E    RLD KF EAK ESE RIR+AMFFQ+AS
Sbjct: 226 GSVSFSSLDHPKFRAFLNQVGLPAISRREFAGPRLDAKFEEAKAESEARIRDAMFFQIAS 285

Query: 292 DGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGN 351
           DGW+ +   G    +NLV  TVNLPNGTSV+++A+   G+V  K AE+V WET+ GICGN
Sbjct: 286 DGWQPKHH-GFLGAENLVNLTVNLPNGTSVFRRAVFVSGNVPPKYAEEVLWETITGICGN 344

Query: 352 GVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCL 411
            VQ+CVG+VADK+KAKAL+NLE QN WMVN+SCQ QGF SL+KDF KELP+F  V E CL
Sbjct: 345 AVQQCVGVVADKFKAKALKNLENQNHWMVNLSCQYQGFNSLIKDFSKELPLFQKVTENCL 404

Query: 412 KIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVL 471
           K+ NFVNN  Q+R+  +K+++    +VEL+RVP  + + + NF  ++ MLED+ +SAR L
Sbjct: 405 KVANFVNNHSQVRNIFQKYQLQEYRHVELLRVPVREHE-KLNFEPVYTMLEDILNSARAL 463

Query: 472 QMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIG 531
           Q+ +LD+S K+  ++DP++RE   + +   FW+ELEAV+SLVKLIK M QEIE ERPL+G
Sbjct: 464 QLVLLDESYKIVSVEDPIAREFAEMGRDMRFWSELEAVHSLVKLIKEMAQEIETERPLVG 523

Query: 532 QCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSG 591
           QCLPLW ELR+KVK+WC+KF I    VEK++++RF+KNYHPAW+AAFILDPLYLI+D SG
Sbjct: 524 QCLPLWNELRAKVKDWCSKFHIDEAPVEKVIDRRFKKNYHPAWAAAFILDPLYLIRDTSG 583

Query: 592 KYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDP 651
           KYLPPFKCLT +QEKDVDKLITRLVSREEAH ALMELMKWR++GL+P+YAQAVQ+K+RDP
Sbjct: 584 KYLPPFKCLTPDQEKDVDKLITRLVSREEAHIALMELMKWRTDGLEPVYAQAVQLKERDP 643

Query: 652 ITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHS 711
           ITGKM+ ANPQSSRLVWET L+E+KSL KVAVRLIFLHATS GFKCN SF++W C   HS
Sbjct: 644 ITGKMKTANPQSSRLVWETYLTEFKSLAKVAVRLIFLHATSCGFKCNLSFLRWVCANGHS 703

Query: 712 RASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           RA + RAQKMIF+AAH+KLE+RDFSN+E+KDAEL A++  EDD+LNEVF D+SS+
Sbjct: 704 RAGMYRAQKMIFIAAHSKLERRDFSNDEDKDAELLASTNGEDDVLNEVFVDSSSV 758

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124932|ref|XP_002329849.1| predicted protein [Populus trichocarpa] gi|222871086|gb|EEF08217.1| predicted protein [Populus trichocarpa]

 Score =  977 bits (2525), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/767 (62%), Positives = 592/767 (77%), Gaps = 38/767 (4%)

Query: 31  DDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAV 90
           +++ +KA +KRYEGL+MVRTKAIKGKGAWYW HLEP+LV + +T LPKAVKL+CS CDAV
Sbjct: 3   EELTAKAAHKRYEGLVMVRTKAIKGKGAWYWAHLEPMLVHNTDTGLPKAVKLRCSFCDAV 62

Query: 91  FSASNPSRTASEHLKRGTCPNFAAVLKP-HSLSP----LPLSSFAASPPPVHVTNNGNGN 145
           FSASNPSRTASEHLKRGTCPNF ++ KP  S+SP    LP  S       V  T++    
Sbjct: 63  FSASNPSRTASEHLKRGTCPNFNSLPKPISSISPNTALLPSPSCGGGGATVVHTSS---- 118

Query: 146 GNRKR----------------SKNQTQARTGNINNNSLAIVEST----------QSPHLV 179
            NRKR                S     A       + LAIV+ +          Q PHL+
Sbjct: 119 -NRKRPVVSSSGISGSCGVASSTYPVTAVGSTYQVSPLAIVDPSRFSDEIAMLPQQPHLM 177

Query: 180 LSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSF 239
           LSGG++DLGALAMLEDSVKKLKSPKT PG  LSK QID A + L DW Y+SCGSVSF+S 
Sbjct: 178 LSGGKDDLGALAMLEDSVKKLKSPKTLPGQALSKTQIDCAFDYLADWVYESCGSVSFTSL 237

Query: 240 DHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTC 299
           +HPKFRAFL+QVGLPVVSR++ +  RL+ K+ EA+ ESE RIR+AMFFQ+ASDGWK+++ 
Sbjct: 238 EHPKFRAFLNQVGLPVVSRRDFVGGRLNVKYEEARAESEARIRDAMFFQIASDGWKVKSN 297

Query: 300 CGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGI 359
            G GD  NLV  TVNLPNGT +Y++A+   GSV SK AE+VFWET+ GICG+ VQ+CVGI
Sbjct: 298 GGFGDV-NLVNLTVNLPNGTGLYRRAVFVSGSVPSKYAEEVFWETITGICGSLVQQCVGI 356

Query: 360 VADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNN 419
           VAD++KAKALRNLE QN WMVN+SCQLQGF SL+KDF KELP+F +V E C K+ +F+NN
Sbjct: 357 VADRFKAKALRNLENQNHWMVNLSCQLQGFTSLIKDFSKELPLFRTVSENCFKLASFINN 416

Query: 420 KPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDS 479
           K  IR+S  K+++       L+RVP    + + +F  ++ MLED+ SSA+ LQ+ + D+S
Sbjct: 417 KTPIRNSFHKYQLQEYGNAGLLRVPLRGYE-KMDFGPVYTMLEDIMSSAQALQLVLQDES 475

Query: 480 IKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEE 539
            K+  M+DP SREV  +I+   FWN+L+AV+SLVKLIK M QEIE ERPL+GQCLPLW+E
Sbjct: 476 YKIVSMEDPTSREVAEMIRDVGFWNDLDAVHSLVKLIKEMAQEIEIERPLVGQCLPLWDE 535

Query: 540 LRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKC 599
           LR+KVK+WC+KF I    VEK++E+RF+KNYHPAW+AA+ILDPLYL++DNSGKYLPPFKC
Sbjct: 536 LRAKVKDWCSKFHIAEGAVEKVIERRFKKNYHPAWAAAYILDPLYLLRDNSGKYLPPFKC 595

Query: 600 LTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIA 659
           LT EQEKDVDKLITRLVSREEAH ALMELMKWR+EGLDP+YA+AVQ+K+RDPITGKMRI 
Sbjct: 596 LTPEQEKDVDKLITRLVSREEAHIALMELMKWRTEGLDPVYARAVQMKERDPITGKMRIV 655

Query: 660 NPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQ 719
           NPQSSRLVWET L+E+KSLGKVAVRLIFLHATS GFKCNWS ++W C   HSR  +++ Q
Sbjct: 656 NPQSSRLVWETYLTEFKSLGKVAVRLIFLHATSCGFKCNWSLLRWVCAHGHSREGMDKVQ 715

Query: 720 KMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           K+IF+AAH+KL++R+  ++E+KDA+LFA +  EDD+LNEV  D SS+
Sbjct: 716 KLIFIAAHSKLDRREVLSDEDKDADLFALANGEDDVLNEVLVDTSSV 762

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459674|ref|XP_004147571.1| PREDICTED: uncharacterized protein LOC101211194 [Cucumis sativus] gi|449506110|ref|XP_004162656.1| PREDICTED: uncharacterized LOC101211194 [Cucumis sativus]

 Score =  977 bits (2525), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/766 (62%), Positives = 595/766 (77%), Gaps = 34/766 (4%)

Query: 25  TATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKC 84
           + +++ D+V +KAV KRYEGL+MVRTKAIKGKGAWYW HLEPILV + +T LPKAVKL+C
Sbjct: 21  SGSSSADEVTAKAVQKRYEGLVMVRTKAIKGKGAWYWAHLEPILVHNTDTGLPKAVKLRC 80

Query: 85  SLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHSLSPLPLSSF----AASPPPVHVTN 140
           SLCDAVFSASNPSRTASEHLKRGTCPNF ++ KP  +S +  SSF      SPPP+H +N
Sbjct: 81  SLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKP--ISTVSPSSFLPPTPTSPPPLHHSN 138

Query: 141 NGNGNGNRKRSKNQTQARTGNINNNS--------LAIVE------------STQSPHLVL 180
           N      RKR+ +   A +G+             LAIV+            S   PHL+L
Sbjct: 139 N------RKRTSSAVAASSGDRAGGGGSSYQVPPLAIVDPSRFCGELTYSPSVGQPHLML 192

Query: 181 SGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFD 240
           SGG+EDLGALAMLEDSVKKLKSPKT PGP LSK QID A++ L DW Y+S GSVSFSS +
Sbjct: 193 SGGKEDLGALAMLEDSVKKLKSPKTSPGPTLSKTQIDCAIDFLADWVYESGGSVSFSSLE 252

Query: 241 HPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVASDGWKIRTCC 300
           HPKFRAFL+QVGLP +SR++  ++RL+ KF +AK ESE++IR+AMFFQ+ASDGWK +   
Sbjct: 253 HPKFRAFLNQVGLPAISRRDFTNSRLNSKFEDAKAESEVKIRDAMFFQLASDGWKDKNYA 312

Query: 301 GDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIV 360
             G D  LV  TVNLPNGTS+Y++A+   GSV S  A+++ WETV  I GN VQ+CVGIV
Sbjct: 313 VFGID-KLVNLTVNLPNGTSLYRRAVFVSGSVPSSYAQEILWETVADISGNVVQQCVGIV 371

Query: 361 ADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNK 420
           ADK+KAKAL+NLE QN WMVN+SCQ QGF SL+KDF K+LP+F SV E C+K+ NFVN K
Sbjct: 372 ADKFKAKALKNLENQNNWMVNLSCQFQGFSSLVKDFSKQLPLFNSVTEHCMKLANFVNYK 431

Query: 421 PQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSI 480
            QIR+   K ++       L+RVP    + + NF  +F ++ED+ S +R LQ+ VLD++ 
Sbjct: 432 SQIRNCFHKVQLQEYGNAMLLRVPPRNHE-KLNFGPVFTLMEDILSFSRALQLVVLDETW 490

Query: 481 KVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEEL 540
           K++ +DDP++REV  +I    FWNELEAV+SLVKLI  M  EIE ERPL+GQCLPLW++L
Sbjct: 491 KIASVDDPIAREVAELIGDVGFWNELEAVHSLVKLITDMAVEIEKERPLVGQCLPLWDQL 550

Query: 541 RSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCL 600
           R KVK+WC+KF I    VEK++EKRF+KNYHPAW+A+FILDPLYLI+D SGKYLPPFKCL
Sbjct: 551 RGKVKDWCSKFQIAEGPVEKVIEKRFKKNYHPAWAASFILDPLYLIRDTSGKYLPPFKCL 610

Query: 601 TEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIAN 660
           T +QEKDVDKLITRLVS EEAH ALMELMKWR+EGLDP+YA+AVQ+K+RDPITGKMR+AN
Sbjct: 611 TPDQEKDVDKLITRLVSSEEAHIALMELMKWRTEGLDPVYARAVQMKERDPITGKMRVAN 670

Query: 661 PQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQK 720
           PQSSRLVWET L+E+KSLGKVAVRLIFLHATS GFKCNWS ++W     H +A ++RAQK
Sbjct: 671 PQSSRLVWETYLTEFKSLGKVAVRLIFLHATSCGFKCNWSLLRWLSSHTHQKAGMDRAQK 730

Query: 721 MIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           +IF++AH+KLE+RDFS +E+KDAELF+ +  EDD+LNEVFAD SS+
Sbjct: 731 LIFISAHSKLERRDFSTDEDKDAELFSLANGEDDVLNEVFADTSSV 776

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537111|ref|XP_002509622.1| conserved hypothetical protein [Ricinus communis] gi|223549521|gb|EEF51009.1| conserved hypothetical protein [Ricinus communis]

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/775 (61%), Positives = 594/775 (76%), Gaps = 35/775 (4%)

Query: 25  TATATTDDVASKAVNKRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKC 84
           T  A+ D++ +KAV+KRYEGL++VRTKAIKGKGAWYW HLEP+LV + +T LPKAVKL+C
Sbjct: 20  TTAASADELNAKAVHKRYEGLVLVRTKAIKGKGAWYWAHLEPMLVHNTDTGLPKAVKLRC 79

Query: 85  SLCDAVFSASNPSRTASEHLKRGTCPNFAAVLKPHS--------------LSPLPLSSFA 130
           SLCDAVFSASNPSRTASEHLKRGTCPNF ++ KP S              ++ +   S  
Sbjct: 80  SLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISSISPSSNTPPPPPPVATIASPSSG 139

Query: 131 ASPPPVHVTNNGNGNGNRKRSKNQTQARTG--------NINNNSLAIVEST--------- 173
                  V+ +   + NRKRS   +             +   + LAIV+ +         
Sbjct: 140 GGSGGGVVSASAIVHNNRKRSAGASSGIVSATVPYVAPSYQVSPLAIVDPSRFSGELAVL 199

Query: 174 --QSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYDSC 231
             Q  HL+LSGG++DL ALAMLE+SVKKLKSPKT PGP LSK QID A + L DW Y+SC
Sbjct: 200 PQQQQHLMLSGGKDDLDALAMLENSVKKLKSPKTSPGPALSKSQIDFAFDYLADWVYESC 259

Query: 232 GSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQVAS 291
           GSVSFS+ +HPKFRAFL+QVGLP VSR+E    RLD KF E K ESE RIR+AMFFQ+AS
Sbjct: 260 GSVSFSALEHPKFRAFLNQVGLPAVSRREFSGGRLDIKFEETKAESEARIRDAMFFQIAS 319

Query: 292 DGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGN 351
           DGWK++   G   + NLV  T+NLPNGTS+Y++A+    SV SK AE+V WET+ GICG+
Sbjct: 320 DGWKVKNHRG-FSELNLVNLTLNLPNGTSLYRRAVFVSDSVPSKYAEEVLWETISGICGS 378

Query: 352 GVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCL 411
            VQ+CVGIVAD++KAKALRNLE QN WMVN+SCQ QGF +L+KDF KEL +F +V E C 
Sbjct: 379 AVQQCVGIVADRFKAKALRNLENQNYWMVNLSCQFQGFTNLIKDFSKELSLFKTVTENCF 438

Query: 412 KIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVL 471
           K+ NF+NNK QIR+S  K+++    +  L+RVP  + + + +F  ++ MLED+ SSAR +
Sbjct: 439 KLANFINNKSQIRNSFHKYQLQEYGHTGLLRVPLREHE-KMDFGPVYNMLEDILSSARAI 497

Query: 472 QMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIG 531
            M ++D+S K+  ++DP +REV  +I+   FWNELEAV+SLVKLIK M QEIE ERPL+G
Sbjct: 498 PMVLVDESYKIVSLEDPTAREVAEMIRDVGFWNELEAVHSLVKLIKEMAQEIETERPLVG 557

Query: 532 QCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSG 591
           QCLPLW+ELR KVK+WC+KF I    VEK+VE+RF+KNYHPAW+AA+ILDPLYL++D SG
Sbjct: 558 QCLPLWDELRGKVKDWCSKFHIAEGEVEKVVERRFKKNYHPAWAAAYILDPLYLLRDTSG 617

Query: 592 KYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDP 651
           KYLPPFKCLT EQEKDVDKLITRLVSREEAH ALMELMKWR+EGLDP+YA+AVQ+K+RDP
Sbjct: 618 KYLPPFKCLTAEQEKDVDKLITRLVSREEAHIALMELMKWRTEGLDPVYARAVQMKERDP 677

Query: 652 ITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHS 711
           ITGKMR+ANPQSSRLVWET L+E+KSLGKVAVRLIFLHAT+ GFKCNWS +KW C   HS
Sbjct: 678 ITGKMRMANPQSSRLVWETYLTEFKSLGKVAVRLIFLHATACGFKCNWSLLKWVCAHGHS 737

Query: 712 RASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDDMLNEVFADASSI 766
           RA+L++AQK+IFVAAH+K E+R+FS++E+KDAELFA +  EDD+LNEV  D+SS+
Sbjct: 738 RAALDKAQKLIFVAAHSKFERREFSSDEDKDAELFALANGEDDVLNEVLVDSSSV 792

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	770
TAIR|locus:2015534	762	AT1G62870 [Arabidopsis thalian	0.929	0.939	0.588	3.5e-233
TAIR|locus:2034695	793	AT1G12380 "AT1G12380" [Arabido	0.766	0.744	0.589	1.2e-193
TAIR|locus:2017864	651	AT1G79740 [Arabidopsis thalian	0.374	0.442	0.251	2.9e-06

TAIR|locus:2015534 AT1G62870 [Arabidopsis thaliana (taxid:3702)]

 Score = 2249 (796.7 bits), Expect = 3.5e-233, P = 3.5e-233
 Identities = 434/737 (58%), Positives = 557/737 (75%)

Query:    40 KRYEGLMMVRTKAIKGKGAWYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSASNPSRT 99
             KRYEGLMMVRTKA+KGKGAWYW HLEPIL+ + +T  PKAVKL+CSLCDAVFSASNPSRT
Sbjct:    37 KRYEGLMMVRTKAVKGKGAWYWSHLEPILLHNTDTGFPKAVKLRCSLCDAVFSASNPSRT 96

Query:   100 ASEHLKRGTCPNFAAVLKPHXXXXXXXXXXXXXXXXVHVTXXXXXXXXRKRSKNQTQART 159
             ASEHLKRGTCPNF ++ KP                    +             +      
Sbjct:    97 ASEHLKRGTCPNFNSLPKPISTISPSPPPPPSSSHRKRNSSAVEALNHHHHHPHHHHQ-- 154

Query:   160 GNINNNSLAIVES---------TQSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPV 210
             G+ N   L++V+          TQ PHL+LSGG++DLG LAMLEDSVKKLKSPKT     
Sbjct:   155 GSYNVTPLSVVDPSRFCGQFPVTQQPHLMLSGGKDDLGPLAMLEDSVKKLKSPKTSQTRN 214

Query:   211 LSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKF 270
             L+K QIDSA++ L+DW ++SCGSVS S  +HPK RAFL+QVGLP++SR++ +  RLD K+
Sbjct:   215 LTKAQIDSALDSLSDWVFESCGSVSLSGLEHPKLRAFLTQVGLPIISRRDFVTGRLDLKY 274

Query:   271 VEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGG 330
              +++ E+E RI +AMFFQ+ASDGWK      D   +NLV   VNLPNGTS+Y++A+   G
Sbjct:   275 EDSRAEAESRIHDAMFFQIASDGWKF-----DSSGENLVNLIVNLPNGTSLYRRAVFVNG 329

Query:   331 SVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFL 390
             +V S  AE+V WETV GICGN  QRCVGIV+D++ +KALRNLE+Q+QWMVN+SCQ QGF 
Sbjct:   330 AVPSNYAEEVLWETVRGICGNSPQRCVGIVSDRFMSKALRNLESQHQWMVNLSCQFQGFN 389

Query:   391 SLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVPSNKCDC 450
             SL++DF KELP+F SV ++C ++ NFVN+  QIR+++ K+++       ++ +P +    
Sbjct:   390 SLIRDFVKELPLFKSVSQSCSRLVNFVNSTAQIRNAVCKYQLQEQGETRMLHLPLDS--- 446

Query:   451 RNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVY 510
              + F  L+ +LEDV S AR +Q+ + DD  K   M+D ++REV  ++    FWNE+EAVY
Sbjct:   447 -SLFEPLYNLLEDVLSFARAIQLVMHDDVCKAVLMEDHMAREVGEMVGDVGFWNEVEAVY 505

Query:   511 SLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGEN-VEKIVEKRFRKN 569
              L+KL+K M + IE ERPL+GQCLPLW+ELRSK+K+W AKF++  E  VEKIVE+RF+K+
Sbjct:   506 LLLKLVKEMARRIEEERPLVGQCLPLWDELRSKIKDWYAKFNVVEERQVEKIVERRFKKS 565

Query:   570 YHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELM 629
             YHPAW+AAFILDPLYLIKD+SGKYLPPFKCL+ EQEKDVDKLITRLVSR+EAH A+MELM
Sbjct:   566 YHPAWAAAFILDPLYLIKDSSGKYLPPFKCLSPEQEKDVDKLITRLVSRDEAHIAMMELM 625

Query:   630 KWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLH 689
             KWR+EGLDP+YA+AVQ+K+RDP++GKMRIANPQSSRLVWET LSE++SLG+VAVRLIFLH
Sbjct:   626 KWRTEGLDPVYARAVQMKERDPVSGKMRIANPQSSRLVWETYLSEFRSLGRVAVRLIFLH 685

Query:   690 ATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATS 749
             ATS GFKCN S ++W      SRA+++RAQK+IF++A++K E+RDFSNEEE+DAEL A +
Sbjct:   686 ATSCGFKCNSSVLRWVNSNGRSRAAVDRAQKLIFISANSKFERRDFSNEEERDAELLAMA 745

Query:   750 GCEDDMLNEVFADASSI 766
               EDD+LN+V  D SS+
Sbjct:   746 NGEDDVLNDVLIDTSSV 762

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2034695 AT1G12380 "AT1G12380" [Arabidopsis thaliana (taxid:3702)]

 Score = 1876 (665.4 bits), Expect = 1.2e-193, P = 1.2e-193
 Identities = 361/612 (58%), Positives = 477/612 (77%)

Query:   172 STQSP--HLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLSKDQIDSAVELLTDWFYD 229
             ST  P  HL+LSGG++DLG LAMLEDSVKKLKSPK      L++ QI+SA++ L+DW ++
Sbjct:   187 STPPPPQHLMLSGGKDDLGPLAMLEDSVKKLKSPKPSQTQSLTRSQIESALDSLSDWVFE 246

Query:   230 SCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEIRIREAMFFQV 289
             SCGSVS S  +HPKFRAFL+QVGLP++S+++    RLD K  EA+ E+E RIR+AMFFQ+
Sbjct:   247 SCGSVSLSGLEHPKFRAFLTQVGLPIISKRDFATTRLDLKHEEARAEAESRIRDAMFFQI 306

Query:   290 ASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGIC 349
             +SDGWK     G+  + +LV   VNLPNGTS+Y++A++  G+V S  AE+V  ETV GIC
Sbjct:   307 SSDGWKP----GESGE-SLVNLIVNLPNGTSLYRRAVLVNGAVPSNYAEEVLLETVKGIC 361

Query:   350 GNGVQRCVGIVADKYKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRET 409
             GN  QRCVGIV+DK+K KALRNLE+Q+QWMVN+SCQ QG  SL+KDF KELP+F SV + 
Sbjct:   362 GNSPQRCVGIVSDKFKTKALRNLESQHQWMVNLSCQFQGLNSLIKDFVKELPLFKSVSQN 421

Query:   410 CLKIGNFVNNKPQIRSSLRKHKMVGLEYVELIRVP------SNKCDCRNN---------F 454
             C+++  F+NN  QIR++  K+++       ++R+P        +  C ++         +
Sbjct:   422 CVRLAKFINNTAQIRNAHCKYQLQEHGESIMLRLPLHCYYDDERRSCSSSSSGSNKVCFY 481

Query:   455 VHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVK 514
               LF +LEDV SSAR +Q+ V DD+ KV  M+D ++REV  ++  E FWNE+EAV++L+K
Sbjct:   482 EPLFNLLEDVLSSARAIQLVVHDDACKVVLMEDHMAREVREMVGDEGFWNEVEAVHALIK 541

Query:   515 LIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAW 574
             L+K M + IE E+ L+GQCLPLW+ELR+KVK+W +KF++   +VEK+VE+RF+K+YHPAW
Sbjct:   542 LVKEMARRIEEEKLLVGQCLPLWDELRAKVKDWDSKFNVGEGHVEKVVERRFKKSYHPAW 601

Query:   575 SAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLVSREEAHFALMELMKWRSE 634
             +AAFILDPLYLI+D+SGKYLPPFKCL+ EQEKDVDKLITRLVSR+EAH ALMELMKWR+E
Sbjct:   602 AAAFILDPLYLIRDSSGKYLPPFKCLSPEQEKDVDKLITRLVSRDEAHIALMELMKWRTE 661

Query:   635 GLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFG 694
             GLDP+YA+AVQ+K+RDP++GKMRIANPQSSRLVWET LSE++SLGKVAVRLIFLHAT+ G
Sbjct:   662 GLDPMYARAVQMKERDPVSGKMRIANPQSSRLVWETYLSEFRSLGKVAVRLIFLHATTGG 721

Query:   695 FKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHAKLEKRDFSNEEEKDAELFATSGCEDD 754
             FKCN S +KW      S A+++RAQK+IF++A++K E+RDFSNEE++DAEL A +  +D 
Sbjct:   722 FKCNSSLLKWVNSNGRSHAAVDRAQKLIFISANSKFERRDFSNEEDRDAELLAMANGDDH 781

Query:   755 MLNEVFADASSI 766
             MLN+V  D SS+
Sbjct:   782 MLNDVLVDTSSV 793

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2017864 AT1G79740 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 81/322 (25%), Positives = 139/322 (43%)

Query:   302 DGDDDNLVKFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVA 361
             D     L+ F+V+ P+    ++    +    +SK   D+F   +  I   G +  V I+ 
Sbjct:   187 DNKSRALINFSVSSPSRIFFHKSVDASSYFKNSKCLADLFDSVIQDI---GQEHIVQIIM 243

Query:   362 DK-YKAKALRNLETQNQWMVNVS-CQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNN 419
             D  +    + N   QN   + VS C  Q    +L++F K   V   + +  + I  FV N
Sbjct:   244 DNSFCYTGISNHLLQNYATIFVSPCASQCLNIILEEFSKVDWVNQCISQAQV-ISKFVYN 302

Query:   420 KPQIRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDS 479
                +   LRK  + G +  ++IR  S      +NF+ L  M++     AR+  M    + 
Sbjct:   303 NSPVLDLLRK--LTGGQ--DIIR--SGVTRSVSNFLSLQSMMKQ---KARLKHMFNCPEY 353

Query:   480 IKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEE 539
                +  + P S   V I++   FW  +E   ++ + I  + +E+   +P +G       E
Sbjct:   354 --TTNTNKPQSISCVNILEDNDFWRAVEESVAISEPILKVLREVSTGKPAVGSIY----E 407

Query:   540 LRSKVKNWCAKFSIPGENVEK----IVEKRFRKNYH-PAWSAAFILDPLYLIKDNSGKYL 594
             L SK K     + I  EN  K    IV+  + ++ H P  +AA  L+P       S +Y 
Sbjct:   408 LMSKAKESIRTYYIMDENKHKVFSDIVDTNWCEHLHSPLHAAAAFLNP-------SIQYN 460

Query:   595 PPFKCLTEEQEKDVDKLITRLV 616
             P  K LT  +E D  K++ +L+
Sbjct:   461 PEIKFLTSLKE-DFFKVLEKLL 481


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      770       723   0.00085  121 3  11 22  0.38    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  406 KB (2196 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  58.23u 0.10s 58.33t   Elapsed:  00:00:02
  Total cpu time:  58.23u 0.10s 58.33t   Elapsed:  00:00:03
  Start:  Sat May 11 08:52:56 2013   End:  Sat May 11 08:52:59 2013

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046983 "protein dimerization activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	770
KOG1121	641	consensus Tam3-transposase (Ac family) [Replicatio	100.0
PF04937	153	DUF659: Protein of unknown function (DUF 659); Int	99.97
PF05699	86	Dimer_Tnp_hAT: hAT family C-terminal dimerisation	99.57
PF14372	101	DUF4413: Domain of unknown function (DUF4413)	97.09
PF14291	235	DUF4371: Domain of unknown function (DUF4371)	96.11
PF10683	68	DBD_Tnp_Hermes: Hermes transposase DNA-binding dom	95.49
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	89.98
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.25
PF12017	236	Tnp_P_element: Transposase protein; InterPro: IPR0	82.44

>KOG1121 consensus Tam3-transposase (Ac family) [Replication, recombination and repair]

Probab=100.00  E-value=1.3e-31  Score=317.87  Aligned_cols=482  Identities=16%  Similarity=0.180  Sum_probs=333.9

Q ss_pred             HHHHHHHHHHHHhcCCCccccccCCHHHHHHHHHcC--CCCCChhhHHHHHHHHHHHHHHHHHHHHHhh-ccceEEEecc
Q 004183          217 DSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVG--LPVVSRKEVLDARLDRKFVEAKTESEIRIRE-AMFFQVASDG  293 (770)
Q Consensus       217 ~~a~~~ia~~i~~~~~~iPfs~VE~p~Fr~~l~~l~--~~~PSr~~l~~~~L~~~y~evk~~v~~~lk~-a~~~sIttDg  293 (770)
                      +...+.+++||+-+  ++||+.||+++||.|+..++  |.+|+|.++....+.. |...|.+++..+.. ...+++|+|+
T Consensus        97 ~~~~~~~~~~ii~~--~lp~~~ve~~~~~~~~~~~~P~~~~~~~~t~~~~~~~~-~~~~k~~~~~~~~~~~~~v~lT~d~  173 (641)
T KOG1121|consen   97 KVIREAIARMIILH--GLPLSTVEEPGFRELLKHLNPNYKLPSRSTLEADVLKI-YEAEKPKLKEILEKIIGRVSLTTDL  173 (641)
T ss_pred             HHHHHHHHHHHHhc--CCChhhccchhHHHHHHhcCCCcccCChhHHHHHHHHH-HHHHHHHHHHHHHccCCceEEEEee
Confidence            45668899999999  99999999999999999998  8999999997765554 66667777776665 4579999999


Q ss_pred             cccCCCCCCCCCCceeEEEeecCCCceeeeeeEe---cCCCCCHHHHHHHHHHHHHhhhcCC-cceEEEEEechhh---H
Q 004183          294 WKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALI---TGGSVSSKLAEDVFWETVMGICGNG-VQRCVGIVADKYK---A  366 (770)
Q Consensus       294 WTs~~~~~g~~~~s~i~~tvh~~~g~~~f~ksv~---~s~~~ta~~i~e~L~~vIee~~~~g-~~kVv~IVTDN~~---~  366 (770)
                      |++.+     ....|+.+++||++..|-.++.+.   +...|+++.++..+.+++.+|   + ..+|..++.||.+   .
T Consensus       174 w~~~~-----~~~~y~~~t~h~id~~~~l~~~il~~~~~~~~~~~~i~~~~~~~~~~~---~i~~kv~~~~~~n~~~~~~  245 (641)
T KOG1121|consen  174 WSDSG-----TDEGYMVLTAHYIDRDWELHNKILSFCIPPPHLGKALASVLNECLLEW---GIEKKVFSITVDNVNVSNI  245 (641)
T ss_pred             ecCCC-----CCcceEEEEEEEeccchHhhhheeeeecCCcchHHHHHHHHHHHHHhh---ChhheEEEEeecccchhHH
Confidence            99864     244999999999987654444332   234799999999999999999   6 4577777788822   1


Q ss_pred             HHHHH-HHhhcC-----cceecchhHHHHHHHHhHhhccCchhhhHHHHHHHHHHHHcCchHHHHHHHHHhhhccccccc
Q 004183          367 KALRN-LETQNQ-----WMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVEL  440 (770)
Q Consensus       367 kA~~~-L~~k~~-----~i~~l~C~aH~LnLivkD~~k~l~~v~~vi~karkIv~ff~~s~~~~~~Lrk~q~q~~g~~~L  440 (770)
                      ...+. +....+     ..++.+|.+|.+|+++++.++  ..+...+.+++..|.+++.+......|.+.+.+. +....
T Consensus       246 ~~~~~~l~~~~~~~~~~~~~~~~C~~~~~~~~v~~~l~--~~~~~~l~~ir~~v~~vk~s~~~~~~f~~~~~~~-~~~~~  322 (641)
T KOG1121|consen  246 ETLRDHLKSSNALLLLGKFFHVRCFAHILNLIVQEGLK--EEFSSLLEKLRESVKYVKSSESRESSFEECQEQL-GIPSD  322 (641)
T ss_pred             HHhhHHHhhcccceecceeeeeehhhhhhhHHHHHHHH--HHHhHHHHHHHHHHHHHhcChHHHHHHHHHHHhc-CCccc
Confidence            22221 111111     124889999999999999965  7899999999999999999999999999998653 22111


Q ss_pred             cccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcc-cccccCCCCccccchheeecChhHHHHHHHHHHHHHHHHHH
Q 004183          441 IRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDD-SIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIKGM  519 (770)
Q Consensus       441 lr~~~t~~~~~tRW~S~y~mLerlle~k~aL~~l~~~e-~~~~~~~~~~~a~ev~~ivld~~FW~~Le~vv~lLkP~~~a  519 (770)
                        ....  +..+||+++|.||.+.++.+.++..+...+ .+              ....+...|..++.++.+|+||.++
T Consensus       323 --~~~~--d~~~~w~st~~ml~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~~~~~  384 (641)
T KOG1121|consen  323 --VLLL--DVSTRWNSTYLMLSRALKLKDAFSKLEEEDKSY--------------KSYPSDEEWNRLEELCDFLQPFSEV  384 (641)
T ss_pred             --cccc--cCCccchhHHHHHHHHHHHHHHHHHHHHhcccc--------------ccCcCHHHHHHHHHHHHHHHHHHHH
Confidence              1111  234699999999999999999999988754 22              1233445599999999999999999


Q ss_pred             HHHHhccC-CcccchHHHHHHHHHHHHHHhhhcCC----ChhhHHHHHHHHHhccCChHHHHHHHhCcccccccCCCCCC
Q 004183          520 TQEIEAER-PLIGQCLPLWEELRSKVKNWCAKFSI----PGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYL  594 (770)
Q Consensus       520 t~~le~d~-ptls~V~Pl~~~L~~k~k~~~~~~~~----~~~~i~~~Id~Rw~~~~~pl~~aA~~LDPry~~kd~~~~yl  594 (770)
                      +..+++.. |+.+.++|.+..+..-+..+...+..    ....+.+.++++|........++|.+|||||++......|.
T Consensus       385 ~~~~s~~~~~ts~~~~~~i~~i~~~l~~~~~~~~~~~~~~a~~m~~k~dk~~~~~~~~~~~~atvlDPR~k~~~~~~~~~  464 (641)
T KOG1121|consen  385 TKLLSGSSYPTSNQYFPEIWKIENLLKTYASGEDEVVRSMAEEMFEKFDKYWSYSICDLLAIATLLDPRFKLKLLESSFE  464 (641)
T ss_pred             HHHhcCCCCchHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHhhhhcccchhHHHHHHHhcChHhHHHHHHHHhh
Confidence            99999887 77779999888877766555433211    12257777888887222478999999999997644322111


Q ss_pred             CCCCcchH---HHHHHHHHHHHHhcCcHHHH-HH-H-HHHhhhhhcCCCh--------HHHHHHHhhcc-----------
Q 004183          595 PPFKCLTE---EQEKDVDKLITRLVSREEAH-FA-L-MELMKWRSEGLDP--------LYAQAVQVKQR-----------  649 (770)
Q Consensus       595 p~~~~lt~---e~~~~v~~~i~rl~~~~e~~-~~-l-~El~~~r~e~~d~--------~~~~~~~~~~~-----------  649 (770)
                      .-+.....   +....+.+.+..+...-... .. . .+...|......+        .+...+.....           
T Consensus       465 ~~~~~~~~~~~~~~~~~~d~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y  544 (641)
T KOG1121|consen  465 KLYGKDPEDAKEKVESVRDKLKKLLEEYKQLSPSNVSNSAHSWDLLDESPLEKDAFEYLFEPEVSIDSGSKSGKSELDHY  544 (641)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccccccccccccchhhhhhhHHHHHHhcCCCCCchHHHH
Confidence            11100000   11111222222221100000 00 0 0000011000000        01000000000           


Q ss_pred             --CcccccccccCCCchhhHhhhhccccchHHHHHHHHhcccccCcccccccccchhhhccccCCCCHHHHhhhhhhhhc
Q 004183          650 --DPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAH  727 (770)
Q Consensus       650 --~~~~~~~~~~~p~sp~~WW~~~~~~fP~L~kLA~riLsipaSS~~sER~FS~~g~I~t~kRnRL~~e~vekLvFl~~N  727 (770)
                        ++..+.+....+.+++.||+.+..+||.|+++|+++|++|++++++|+.||..+.+..+.|++|.+++++.|+|.+.|
T Consensus       545 ~~e~~~~~~~~~~~~~~l~~w~~~~~~y~~ls~~a~d~l~~p~~~~~~e~~f~~~~~~~~~~r~~l~~~~~~~l~c~~~~  624 (641)
T KOG1121|consen  545 LSESPRLLMPSFLDADVLQWWKGNGTRYPELSSMARDILSIPITSVASESSFSIGGRVLNKYRSRLLPENVQALICTRNW  624 (641)
T ss_pred             HhhhhhhhccccccccHHHHhhccCcccchHHHHHHHHHcCcccCccchhhcccCceecCchhccCCchhhHHhhchHhh
Confidence              000000111223457899999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccc
Q 004183          728 AKL  730 (770)
Q Consensus       728 ~kL  730 (770)
                      .+-
T Consensus       625 ~~~  627 (641)
T KOG1121|consen  625 LPG  627 (641)
T ss_pred             hhh
Confidence            664

>PF04937 DUF659: Protein of unknown function (DUF 659); InterPro: IPR007021 These are transposase-like proteins with no known function

Probab=99.97  E-value=5e-32  Score=262.89  Aligned_cols=148  Identities=25%  Similarity=0.350  Sum_probs=138.0

Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHhh--ccceEEEecccccCCCCCCCCCCceeEEEeecCCCceeeeeeEecC-CCC
Q 004183          256 VSRKEVLDARLDRKFVEAKTESEIRIRE--AMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKALITG-GSV  332 (770)
Q Consensus       256 PSr~~l~~~~L~~~y~evk~~v~~~lk~--a~~~sIttDgWTs~~~~~g~~~~s~i~~tvh~~~g~~~f~ksv~~s-~~~  332 (770)
                      ||+++|++++|++.|++++.+++...+.  ..||+|++||||+++      .+++|||+||++.|. +|+++++++ ..|
T Consensus         1 PS~~~Lr~~lL~~~~~~v~~~~~~~k~~w~~~Gcsi~~DgWtd~~------~~~lInf~v~~~~g~-~Flksvd~s~~~~   73 (153)
T PF04937_consen    1 PSYHELRGPLLDKEYKEVKEQVKEHKKSWKRTGCSIMSDGWTDRK------GRSLINFMVYCPEGT-VFLKSVDASSIIK   73 (153)
T ss_pred             CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCEEEEEecCcCCC------CCeEEEEEEEccccc-EEEEEEecccccc
Confidence            9999999999999999999999875554  679999999999984      459999999999999 889999998 589


Q ss_pred             CHHHHHHHHHHHHHhhhcCCcceEEEEEech--hhHHHHHHHHhhcCcceecchhHHHHHHHHhHhhccCchhhhHHHHH
Q 004183          333 SSKLAEDVFWETVMGICGNGVQRCVGIVADK--YKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETC  410 (770)
Q Consensus       333 ta~~i~e~L~~vIee~~~~g~~kVv~IVTDN--~~~kA~~~L~~k~~~i~~l~C~aH~LnLivkD~~k~l~~v~~vi~ka  410 (770)
                      ++++|++++.++|+++   |.++||||||||  ++.+|.+.|..++|+++|+||+|||||||++|++| +|+|++++.+|
T Consensus        74 ~a~~l~~ll~~vIeeV---G~~nVvqVVTDn~~~~~~a~~~L~~k~p~ifw~~CaaH~inLmledi~k-~~~i~~vi~~a  149 (153)
T PF04937_consen   74 TAEYLFELLDEVIEEV---GEENVVQVVTDNASNMKKAGKLLMEKYPHIFWTPCAAHCINLMLEDIGK-LPWIKEVIEKA  149 (153)
T ss_pred             cHHHHHHHHHHHHHHh---hhhhhhHHhccCchhHHHHHHHHHhcCCCEEEechHHHHHHHHHHHHhc-ChHHHHHHHhc
Confidence            9999999999999999   999999999999  67788899999999999999999999999999999 99999999999


Q ss_pred             HHHH
Q 004183          411 LKIG  414 (770)
Q Consensus       411 rkIv  414 (770)
                      +.|+
T Consensus       150 k~it  153 (153)
T PF04937_consen  150 KAIT  153 (153)
T ss_pred             ccCC
Confidence            9873

>PF05699 Dimer_Tnp_hAT: hAT family C-terminal dimerisation region; InterPro: IPR008906 This dimerisation domain is found at the C terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily)

Probab=99.57  E-value=9.9e-16  Score=134.62  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=56.7

Q ss_pred             CCchhhHhhhhccccchHHHHHHHHhcccccCcccccccccchhhhccccCCCCHHHHhhhhhhhhcc
Q 004183          661 PQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERAQKMIFVAAHA  728 (770)
Q Consensus       661 p~sp~~WW~~~~~~fP~L~kLA~riLsipaSS~~sER~FS~~g~I~t~kRnRL~~e~vekLvFl~~N~  728 (770)
                      ..+|+.||+.+...||.|+++|+++|++|+||+.+||.||..+.+++++|+||+++++++|+||+.|+
T Consensus        19 ~~~~l~~W~~~~~~fP~L~~lA~~~Lsip~ss~~~ER~FS~~~~~~~~~r~~l~~~~~~~l~~l~~nl   86 (86)
T PF05699_consen   19 DMDPLEWWKQNSSRFPNLAKLARKYLSIPASSASSERSFSAMGKILTRNRNRLSPENVEALLFLKSNL   86 (86)
T ss_dssp             T--HHHHHHHTTTTSHHHHHHHHHHHTS-S-TTTTHHHHHHTHHHHH-TTT---HHHHHHHHHHHH--
T ss_pred             CCCHHHHHHHCchhchHHHHHHHHHHHhhccccccccccchhhcccccCccCCCHHHHHhhhceeccC
Confidence            45788999999999999999999999999999999999999999999999999999999999999984

The isolated dimerisation domain forms extremely stable dimers in vitro [].; GO: 0046983 protein dimerization activity; PDB: 2BW3_A.

>PF14372 DUF4413: Domain of unknown function (DUF4413)

Probab=97.09  E-value=0.00032  Score=63.87  Aligned_cols=62  Identities=13%  Similarity=0.249  Sum_probs=46.4

Q ss_pred             hccC-CcccchHHHHHHHHHHHHHHhhhcCC---ChhhHHHHHHHHHhccCChHHHHHHHhCccccc
Q 004183          524 EAER-PLIGQCLPLWEELRSKVKNWCAKFSI---PGENVEKIVEKRFRKNYHPAWSAAFILDPLYLI  586 (770)
Q Consensus       524 e~d~-ptls~V~Pl~~~L~~k~k~~~~~~~~---~~~~i~~~Id~Rw~~~~~pl~~aA~~LDPry~~  586 (770)
                      +|.. ||...+++.+..++..++++......   ....|.+.++++|++ .+.++++|++|||||+.
T Consensus         2 S~~~~pTsn~~f~~i~~i~~~l~~~~~~d~~l~~ma~~M~~KfdKYw~~-~~~~l~ia~ILDPR~Kl   67 (101)
T PF14372_consen    2 SGSSYPTSNLYFHEIWKIKDLLRDWNNDDPDLKNMAKKMKEKFDKYWKD-CNLLLAIATILDPRFKL   67 (101)
T ss_pred             CCCCcCcHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhchHHHH
Confidence            5665 89999999999999988885532111   112688888999974 45679999999999954

>PF14291 DUF4371: Domain of unknown function (DUF4371)

Probab=96.11  E-value=0.029  Score=58.85  Aligned_cols=129  Identities=9%  Similarity=0.163  Sum_probs=91.2

Q ss_pred             HHHHHHhcCCCcccccc-------CCHHHHHHHHHcC-C---------------CCCChhhHHHHHHHHHHHHHHHHHHH
Q 004183          223 LTDWFYDSCGSVSFSSF-------DHPKFRAFLSQVG-L---------------PVVSRKEVLDARLDRKFVEAKTESEI  279 (770)
Q Consensus       223 ia~~i~~~~~~iPfs~V-------E~p~Fr~~l~~l~-~---------------~~PSr~~l~~~~L~~~y~evk~~v~~  279 (770)
                      +..|+..-  ++||+==       ++--|+++|+.+. +               ..-+++++... |...-..++..+.+
T Consensus        70 ~i~fL~~Q--gLa~RGh~e~~~s~n~GNFl~ll~l~~~~d~~l~~~~~~~~~~~~~~~s~~iq~~-i~~~a~~v~~~I~~  146 (235)
T PF14291_consen   70 VILFLARQ--GLAFRGHDESEDSLNNGNFLELLELLAKYDPELKKHLSKNAPKNAKYSSKTIQNE-IEILADHVRQSIVE  146 (235)
T ss_pred             HHHHHHhc--ccccccCCccccccccccHHHHHHHHHhhcccchhhhhcccccceeccHHHHHHH-HHHHHHHHHHHHHh
Confidence            35777877  9998762       3347999998874 1               02233444333 36666666777767


Q ss_pred             HHhhccceEEEecccccCCCCCCCCCCceeEEEeecCCCce-ee---eeeEecCCCCCHHHHHHHHHHHHHhhhcCCcce
Q 004183          280 RIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTS-VY---QKALITGGSVSSKLAEDVFWETVMGICGNGVQR  355 (770)
Q Consensus       280 ~lk~a~~~sIttDgWTs~~~~~g~~~~s~i~~tvh~~~g~~-~f---~ksv~~s~~~ta~~i~e~L~~vIee~~~~g~~k  355 (770)
                      .+++ .+++|.+|..+|..      +...++|.|.|.+... +.   +..+++ ...||+.|++.|.++++++ ++..++
T Consensus       147 ~v~~-~~FSii~DettDis------~~eQl~i~vRyv~~~~~i~E~Fl~f~~~-~~~ta~~l~~~i~~~L~~~-~l~~~~  217 (235)
T PF14291_consen  147 EVKS-KYFSIIVDETTDIS------NKEQLSICVRYVDKDGKIKERFLGFVEL-EDTTAESLFNAIKDVLEKL-GLDLSN  217 (235)
T ss_pred             hccc-cceeeeeecccccc------ccchhhheeeeeccCcceeeeeeeeecc-CCccHHHHHHHHHHHHHHc-CCCHHH
Confidence            7765 58999999999984      3478999999976421 12   222233 3578999999999999999 667789


Q ss_pred             EEEEEech
Q 004183          356 CVGIVADK  363 (770)
Q Consensus       356 Vv~IVTDN  363 (770)
                      |+|..+|+
T Consensus       218 ~~gq~yDg  225 (235)
T PF14291_consen  218 CRGQCYDG  225 (235)
T ss_pred             cCcccccC
Confidence            99999998

>PF10683 DBD_Tnp_Hermes: Hermes transposase DNA-binding domain ; InterPro: IPR018473 This domain confers specific DNA-binding on Hermes transposase []

Probab=95.49  E-value=0.023  Score=46.84  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             CHHHHHHHHHHHHHHHHhcCCCccccccCCHHHHHHHHHc
Q 004183          212 SKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQV  251 (770)
Q Consensus       212 ~k~q~~~a~~~ia~~i~~~~~~iPfs~VE~p~Fr~~l~~l  251 (770)
                      +.+..+.+.+.++.|.+++  +.||++|+..||++|.+.+
T Consensus         9 S~~~K~~~~~k~~qw~v~d--cRpfsiv~gsGfk~la~~l   46 (68)
T PF10683_consen    9 SEPDKKEATDKCTQWCVKD--CRPFSIVSGSGFKKLAQFL   46 (68)
T ss_dssp             -HHHHHHHHHHHHHHHHHC--T--GGGGG-HHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhc--CCcceeeccccHHHHHHHH
Confidence            5566778889999999999  8999999999999998876

; PDB: 2BW3_B.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.98  E-value=0.097  Score=40.04  Aligned_cols=40  Identities=30%  Similarity=0.505  Sum_probs=25.0

Q ss_pred             eecccccceeecCCCCCcccchhhhccccccccccC-CCCcchhHhhhc
Q 004183           59 WYWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSAS-NPSRTASEHLKR  106 (770)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  106 (770)
                      +.|.||+++-        ...-+.+|-+|+.+|+++ +.....-.||++
T Consensus         2 ~vW~~F~~~~--------~~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen    2 PVWKHFTKIP--------GDKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             GCCCCCEE----------GCSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CccccEEEcc--------CCcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            6799999887        445567899999999998 444467788855

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00614 ZnF_BED BED zinc finger

Probab=88.25  E-value=0.28  Score=38.58  Aligned_cols=46  Identities=28%  Similarity=0.584  Sum_probs=32.7

Q ss_pred             ecccccceeecCCCCCcccchhhhccccccccccC--CCCcchhHhhhcCCCCC
Q 004183           60 YWVHLEPILVRHPETNLPKAVKLKCSLCDAVFSAS--NPSRTASEHLKRGTCPN  111 (770)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  111 (770)
                      .|-||+.|-..  +.|.   .+-+|-.|+.++++.  |-..+--.||++ +||.
T Consensus         2 vW~~F~~i~~~--~~g~---~~a~C~~C~~~l~~~~~~gTs~L~rHl~~-~h~~   49 (50)
T smart00614        2 VWKHFTLILEK--DNGK---QRAKCKYCGKKLSRSSKGGTSNLRRHLRR-KHPA   49 (50)
T ss_pred             cCccceEEEEc--CCCC---eEEEecCCCCEeeeCCCCCcHHHHHHHHh-HCcC
Confidence            49999986532  3455   456799999999987  555556677776 5774

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects

Probab=82.44  E-value=10  Score=40.00  Aligned_cols=129  Identities=17%  Similarity=0.142  Sum_probs=65.0

Q ss_pred             ccccccCCHHHHHHHHHcCCCCCChhhHHHH---------HHHHHHHHHHHHHHHHHhhc-cceEEEecccccCC-----
Q 004183          234 VSFSSFDHPKFRAFLSQVGLPVVSRKEVLDA---------RLDRKFVEAKTESEIRIREA-MFFQVASDGWKIRT-----  298 (770)
Q Consensus       234 iPfs~VE~p~Fr~~l~~l~~~~PSr~~l~~~---------~L~~~y~evk~~v~~~lk~a-~~~sIttDgWTs~~-----  298 (770)
                      +.+...--.+++-|.+. +||+||.++|...         .++..++-++.+   .+.+. ..|.++.|-=.=..     
T Consensus        81 l~L~~~spr~Y~yL~kk-~~pLPs~rTL~r~l~~v~~~pGi~~~il~~l~~~---~~~~~dr~CvL~fDEm~l~~~~eYD  156 (236)
T PF12017_consen   81 LSLYKCSPRAYNYLRKK-GYPLPSVRTLQRWLSKVNIDPGILDFILDLLKNK---SMSEEDRICVLSFDEMKLSPHLEYD  156 (236)
T ss_pred             heeeecChHHHHHHHHc-CCCCCCHHHHHHHHHhCCCCCCchHHHHHHHHHc---cCchhccEEEEEEeEEEccceeeec
Confidence            44556666788887765 8999999999664         233333433321   13332 36777877543110     


Q ss_pred             ----CCCCCCCCcee-EEEeecCCCceeeeeeEecCCCCCHHHHHHHHHHHHHhhhcCCcceEEEEEech--hhHHHHHH
Q 004183          299 ----CCGDGDDDNLV-KFTVNLPNGTSVYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCVGIVADK--YKAKALRN  371 (770)
Q Consensus       299 ----~~~g~~~~s~i-~~tvh~~~g~~~f~ksv~~s~~~ta~~i~e~L~~vIee~~~~g~~kVv~IVTDN--~~~kA~~~  371 (770)
                          -..|.  ..++ -++|--....|-..=..+.....+++.|.    ++|++.+..|. .|++||+|.  +|..+++.
T Consensus       157 ~~~d~v~~~--~~~~~v~mvrGl~~~WKQpi~~~f~t~m~~~~l~----~iI~~l~~~g~-~VvAivsD~g~~N~~~w~~  229 (236)
T PF12017_consen  157 PSRDEVNEP--ANYVQVFMVRGLFKSWKQPIYFDFDTSMDADILK----NIIEKLHEIGY-NVVAIVSDMGSNNISLWRE  229 (236)
T ss_pred             cccCcccCh--hhhhhHHHHHHHHhcCCccEEEEecCcCCHHHHH----HHHHHHHHCCC-EEEEEECCCCcchHHHHHH
Confidence                00111  0111 11111111111110011112244555554    44555544465 799999997  67778887


Q ss_pred             HH
Q 004183          372 LE  373 (770)
Q Consensus       372 L~  373 (770)
                      |.
T Consensus       230 Lg  231 (236)
T PF12017_consen  230 LG  231 (236)
T ss_pred             cC
Confidence            64

This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	770
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
2bw3_A	534	Transposase; DNA recombination, transposition; 2.0	4e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 3e-09
 Identities = 84/539 (15%), Positives = 155/539 (28%), Gaps = 178/539 (33%)

Query: 228 YDSCGSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLDARLDRKFVEAKTESEI-------- 279
           Y       ++  D+  F  +        VSR +    +L +  +E +    +        
Sbjct: 112 YIEQRDRLYN--DNQVFAKYN-------VSRLQPYL-KLRQALLELRPAKNVLIDGVLGS 161

Query: 280 -------------RIREAMFFQVASDGW-KIRTCCGDGDD-DNLVKFTVNL-PNGTS--- 320
                        +++  M F++    W  ++ C       + L K    + PN TS   
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIF---WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 321 -----------------------VYQKALITGGSVSSKLAEDVFWETVMGICGNGVQRCV 357
                                   Y+  L+   +V +  A + F         N    C 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF---------NL--SCK 267

Query: 358 GIV--ADKYKAKALRNLETQNQWMVNVSCQLQGF-----LSLLKDF----GKELPVFTSV 406
            ++    K     L    T +  + + S            SLL  +     ++LP     
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHS---MTLTPDEVKSLLLKYLDCRPQDLP----- 319

Query: 407 RETC----LKIGNFVNNKPQIRSSLRKH-------KMVGLEYVELIRVPSNKC----DCR 451
           RE       ++         I  S+R         K V  + +  I   S       + R
Sbjct: 320 REVLTTNPRRLS-------IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372

Query: 452 NNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYS 511
             F  L            +L + +  D IK   M   V  ++     S V     E+  S
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSL-IWFDVIKSDVMV--VVNKLHK--YSLVEKQPKESTIS 427

Query: 512 L----VKLIKGMTQEIEAERPLIGQ-----CLPLWEELRSKVKN-WCAKFS---IPGENV 558
           +    ++L   +  E    R ++            + +   +   + +         E+ 
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

Query: 559 EKIVEKRFRKNY-------------HPAWSA-AFILDPL-----YL--IKDNSGKYLPPF 597
           E++    FR  +               AW+A   IL+ L     Y   I DN  KY    
Sbjct: 488 ERMTL--FRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY---- 541

Query: 598 KCLTEEQEKDVDKLI----TRLVSREEA---HFALMELMKWRSEGLDPLYAQAVQVKQR 649
               E     +   +      L+  +       ALM      +E  + ++ +A +  QR
Sbjct: 542 ----ERLVNAILDFLPKIEENLICSKYTDLLRIALM------AED-EAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 4e-06
 Identities = 54/311 (17%), Positives = 108/311 (34%), Gaps = 81/311 (26%)

Query: 485 MDDPVS------REVVAIIQSEVFWNELEAVYSLVKLIKGM--TQEIE---AERPLIGQC 533
           MD          ++++++ + + F +  +    +  + K +   +EI+     +  +   
Sbjct: 7   MDFETGEHQYQYKDILSVFE-DAFVDNFD-CKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 534 LPLWEELRSKVKNWCAKFSIPGENVEKIVEKRFRKNYHPAWSAAFILDPL-YLIKDNSGK 592
           L L+  L SK            E V+K VE+  R NY       F++ P+    +  S  
Sbjct: 65  LRLFWTLLSK----------QEEMVQKFVEEVLRINY------KFLMSPIKTEQRQPSMM 108

Query: 593 YLPPFKCLTEEQEK---DVDKLITRLVSREEAHFALME-LMKWRSEGLDPLYAQAVQVKQ 648
                +   E++++   D        VSR + +  L + L++ R      +         
Sbjct: 109 T----RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG---- 160

Query: 649 RDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQ 708
               +GK        + +  + CLS      KV  +          FK  W  +K  C  
Sbjct: 161 ----SGK--------TWVALDVCLSY-----KVQCK--------MDFKIFWLNLK-NC-- 192

Query: 709 RHSRASLERAQKMIFV--------AAHAKLEKRDFSNEEEKDAELFATSGCEDDM--LNE 758
                 LE  QK+++         + H+   K    + + +   L  +   E+ +  L  
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 759 VFADASSILGF 769
           V  +A +   F
Sbjct: 253 V-QNAKAWNAF 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 4e-06
 Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 69/240 (28%)

Query: 67  IL--VRHPETNLPKAVKLKC---------SLCDAVFSASNPSRTASEHLKRGTCPN---- 111
           +L  V++ +     A  L C          + D + SA+  +  + +H      P+    
Sbjct: 249 VLLNVQNAKA--WNAFNLSCKILLTTRFKQVTDFL-SAATTTHISLDHHSMTLTPDEVKS 305

Query: 112 -FAAVL--KPHSL-------SPLPLSSFAASPPPVHVTNNGNGNGNRKRSKNQTQARTGN 161
                L  +P  L       +P  LS  A S   +      +G       K+    +   
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAES---IR-----DGLATWDNWKHVNCDKLTT 357

Query: 162 INNNSLAIVESTQSPHLVLSGGREDLGALAMLEDSVKKLKSPKTRPGPVLS---KDQIDS 218
           I  +SL ++E  +         R+    L++   S          P  +LS    D I S
Sbjct: 358 IIESSLNVLEPAEY--------RKMFDRLSVFPPSAHI-------PTILLSLIWFDVIKS 402

Query: 219 AVELLTDWFYDSC----GSVSFSSFDHPKFRAFLSQVGLPVVSRKEVLD-ARLDRKFVEA 273
            V ++ +  +            +               + +  + ++ +   L R  V+ 
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIP----------SIYLELKVKLENEYALHRSIVDH 452

>2bw3_A Transposase; DNA recombination, transposition; 2.0A {Musca domestica} SCOP: a.270.1.1 c.55.3.12 PDB: 2bw3_B Length = 534

 Score = 52.5 bits (124), Expect = 4e-07
 Identities = 64/554 (11%), Positives = 137/554 (24%), Gaps = 79/554 (14%)

Query: 211 LSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLS-------------QVGLPVVS 257
           +S D    A+E    W    C    FS+     F   +               V   + S
Sbjct: 11  VSADCKKEAIEKCAQWVVRDC--RPFSAVSGSGFIDMIKFFIKVKAEYGEHVNVEELLPS 68

Query: 258 RKEVLDARLDR--KFVEAKTESEIRIREAMFFQVASDGWKIRTCCGDGDDDNLVKFTVNL 315
              +         +             E        D W       +    N +  T++ 
Sbjct: 69  PITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWT-----DNYIKRNFLGVTLHY 123

Query: 316 PNGTSVYQKALITGG-SVSSKLAEDVFWETVMGICGNGVQRCVGIVADKYKAKALRNLET 374
                +    L           AE+++ +         V+    I     +   +     
Sbjct: 124 HENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLA 183

Query: 375 QNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVG 434
            N  +   +C      ++L++  +E P        C  I  +              K   
Sbjct: 184 NNIRI---NCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKS-- 238

Query: 435 LEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVV 494
                         +C   +   + ML  +           +   +  +     +     
Sbjct: 239 --------------ECPTRWNSTYTMLRSILD-----NWESVIQILSEAGETQRIVHINK 279

Query: 495 AIIQSEVFWNELEAVYSLVKLIKGMTQEIEAERPLIGQCLPLWEELRSKVKNWCAKFSIP 554
           +IIQ+ V          L    +   +      P +   +P   +++          +  
Sbjct: 280 SIIQTMVNI--------LDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADI 331

Query: 555 GENVEKI---VEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKL 611
            +    I   V   + +N       AF   P  L             CL++ ++ ++   
Sbjct: 332 AKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINR 391

Query: 612 ITRLV-----------SREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIA- 659
           ++              S       L    K  S              +  P+        
Sbjct: 392 MSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEF 451

Query: 660 ---------NPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRH 710
                            W     +Y  L K+A+ L+ + A+S   +  +S       ++ 
Sbjct: 452 YRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKR 511

Query: 711 SRASLERAQKMIFV 724
           +R   +    ++F+
Sbjct: 512 NRIGQQTVDSLLFL 525

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	770
2bw3_A	534	Transposase; DNA recombination, transposition; 2.0	100.0

>2bw3_A Transposase; DNA recombination, transposition; 2.0A {Musca domestica} SCOP: a.270.1.1 c.55.3.12 PDB: 2bw3_B

Probab=100.00  E-value=4e-58  Score=530.77  Aligned_cols=461  Identities=13%  Similarity=0.126  Sum_probs=340.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHhcCCCccccccCCHHHHHHHHHcC-------------CCCCChhhHHHHHHHHHHHHH
Q 004183          207 PGPVLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQVG-------------LPVVSRKEVLDARLDRKFVEA  273 (770)
Q Consensus       207 ~~~~~~k~q~~~a~~~ia~~i~~~~~~iPfs~VE~p~Fr~~l~~l~-------------~~~PSr~~l~~~~L~~~y~ev  273 (770)
                      ....+++++.+.+.++|++||+++  ++||++||+|+|++|++.++             +.+||++++++.+++ .|.++
T Consensus         7 ~~~~~~~~~~~~~~~~l~~~i~~~--~~Pf~~ve~~~F~~~l~~l~~~~p~~~~~~~~~~~~ps~~~~~~~i~~-~~~~~   83 (534)
T 2bw3_A            7 ELKTVSADCKKEAIEKCAQWVVRD--CRPFSAVSGSGFIDMIKFFIKVKAEYGEHVNVEELLPSPITLSRKVTS-DAKEK   83 (534)
T ss_dssp             CCBCCCHHHHHHHHHHHHHHHHHT--TCCGGGGGCHHHHHHHHHHHHHHHHHCSCBCHHHHSCCHHHHHHHHHH-HHHHH
T ss_pred             cceecChhhHHHHHHHHHHHHHhc--CCcchhhCCHHHHHHHHHHHhhhhhhccccchhhcCCCcccHHHHHHH-HHHHH
Confidence            355778999999999999999999  99999999999999999883             249999999887555 69999


Q ss_pred             HHHHHHHHhhc---cceEEEecccccCCCCCCCCCCceeEEEeecCCCceeeeeeE---ecCC-CCCHHHHHHHHHHHHH
Q 004183          274 KTESEIRIREA---MFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKAL---ITGG-SVSSKLAEDVFWETVM  346 (770)
Q Consensus       274 k~~v~~~lk~a---~~~sIttDgWTs~~~~~g~~~~s~i~~tvh~~~g~~~f~ksv---~~s~-~~ta~~i~e~L~~vIe  346 (770)
                      ++++.+.++++   .+|+|++|+||+..     ++++||+|+|||+++..+..+.+   .+.+ .|||++|++.|.++|+
T Consensus        84 ~~~l~~~l~~~~~~~~~sl~~D~wt~~~-----~~~~~l~i~v~~i~~~~~~~~~L~~~~~~~~~~t~~~i~~~i~~~l~  158 (534)
T 2bw3_A           84 KALIGREIKSAVEKDGASATIDLWTDNY-----IKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFS  158 (534)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEEETT-----TTEEEEEEEEEEEETTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCceEEEEecccCCC-----CCcceeEEEEEEeeCCceEEEEEeEeecCCCCCCHHHHHHHHHHHHH
Confidence            99999999986   79999999999973     24599999999996553322222   3455 6999999999999999


Q ss_pred             hhhcCCcce--EEEEEech--hhHHHHHHHHhhcCcceecchhHHHHHHHHhHhhccCchhhhHHHHHHHHHHHHcCchH
Q 004183          347 GICGNGVQR--CVGIVADK--YKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQ  422 (770)
Q Consensus       347 e~~~~g~~k--Vv~IVTDN--~~~kA~~~L~~k~~~i~~l~C~aH~LnLivkD~~k~l~~v~~vi~karkIv~ff~~s~~  422 (770)
                      +|   |.++  ++++||||  ++.++++       ..++++|++|+|||+++|++++++.+..++.++++|+.||++|+.
T Consensus       159 ~~---~l~~~~~v~~vtDnasn~~~~~~-------~~~~i~C~~H~lnLi~~~~l~~~~~~~~~l~~~~~iv~~i~~s~~  228 (534)
T 2bw3_A          159 QF---NVEDLSSIKFVTDRGANVVKSLA-------NNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANL  228 (534)
T ss_dssp             TT---TCCCCTTCEEEECCCHHHHHHTT-------TSEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             Hc---CCCcccceeEECCCHHHHHHHHh-------cCcccccHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhccHh
Confidence            99   6654  89999999  5444433       136899999999999999887788999999999999999999875


Q ss_pred             HHHHHHHHhhhccccccccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCccccchheeecChhH
Q 004183          423 IRSSLRKHKMVGLEYVELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVF  502 (770)
Q Consensus       423 ~~~~Lrk~q~q~~g~~~Llr~~~t~~~~~tRW~S~y~mLerlle~k~aL~~l~~~e~~~~~~~~~~~a~ev~~ivld~~F  502 (770)
                      ..      +   ++ ..|+++..      |||+|+|.||+++++++++|..++.++++.              ......+
T Consensus       229 ~~------~---l~-~~l~~~~~------tRW~S~~~~L~~~l~~~~~i~~~~~~~~~~--------------~~~~~~d  278 (534)
T 2bw3_A          229 QH------R---LR-SSLKSECP------TRWNSTYTMLRSILDNWESVIQILSEAGET--------------QRIVHIN  278 (534)
T ss_dssp             GG------G---GC-CCCCCSSC------GGGCHHHHHHHHHHHTHHHHHHHHHHTTCG--------------GGTTTCC
T ss_pred             hH------h---cc-cccCCCCC------CCcHhHHHHHHHHHHHHHHHHHHHHhcccc--------------cCCchhh
Confidence            32      1   11 23444433      599999999999999999999988754321              0124456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccC-CcccchHHHHHHHHHHHHHHhhhcCCC-------hhhHHHHHHHHHhccCChHH
Q 004183          503 WNELEAVYSLVKLIKGMTQEIEAER-PLIGQCLPLWEELRSKVKNWCAKFSIP-------GENVEKIVEKRFRKNYHPAW  574 (770)
Q Consensus       503 W~~Le~vv~lLkP~~~at~~le~d~-ptls~V~Pl~~~L~~k~k~~~~~~~~~-------~~~i~~~Id~Rw~~~~~pl~  574 (770)
                      |..++.++.+|+||+.+++.++++. |++++|||.+..|+..+    .....+       ...+++.+++||++..+++|
T Consensus       279 w~~~~~l~~iL~pf~~~t~~l~~~~~pt~~~v~~~~~~l~~~l----~~~~~~~~~~~~l~~~m~~~l~ky~~~~~~~~~  354 (534)
T 2bw3_A          279 KSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEIC----SPDVGDVADIAKLKVNIIKNVRIIWEENLSIWH  354 (534)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHTCSSSCCGGGHHHHHHHHHHHT----CCCTTSCHHHHHHHHHHHHHHHHTTGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHh----cccccchHHHHHHHHHHHHHHHHHHHhhcchhh
Confidence            9999999999999999999999875 99999999998876543    222111       12578889999998778999


Q ss_pred             HHHHHhCcccccccCCCCCCCCCCc------chHHHHHHHHHHHHHhcC-------cHHHH--HHH--------------
Q 004183          575 SAAFILDPLYLIKDNSGKYLPPFKC------LTEEQEKDVDKLITRLVS-------REEAH--FAL--------------  625 (770)
Q Consensus       575 ~aA~~LDPry~~kd~~~~ylp~~~~------lt~e~~~~v~~~i~rl~~-------~~e~~--~~l--------------  625 (770)
                      ++|++|||||++-+.      .++.      +......++.+.+..+..       .....  ..+              
T Consensus       355 ~~A~~LdPr~~~l~p------~~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (534)
T 2bw3_A          355 YTAFFFYPPALHMQQ------EKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSF  428 (534)
T ss_dssp             HHHHHTSGGGTTSCC------SCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSSSCCC----------------CCCHHHH
T ss_pred             heeeEecccccccCH------HHHHHHHHHHhhhhcchHHHHHHHHHHHhhhhhccCCCCcccccccccccccCccchHH
Confidence            999999999954332      2210      000001111112111100       00000  000              


Q ss_pred             --HHHhhhh-hcCCChHHHHHHHhhccCcccccccccCCCchhhHhhhhccccchHHHHHHHHhcccccCcccccccccc
Q 004183          626 --MELMKWR-SEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFM  702 (770)
Q Consensus       626 --~El~~~r-~e~~d~~~~~~~~~~~~~~~~~~~~~~~p~sp~~WW~~~~~~fP~L~kLA~riLsipaSS~~sER~FS~~  702 (770)
                        ..+.... .+.... ...+...|..++.    ......+|+.||+.++..||.|++||++||++||||++|||+||.+
T Consensus       429 ~~~~~~~~~~~~~~~~-~~~el~~yl~~~~----~~~~~~~~l~wW~~~~~~~p~L~~~a~~~l~~p~ss~~~er~fs~~  503 (534)
T 2bw3_A          429 FFPQLTQNNSREPPVC-PSDEFEFYRKEIV----ILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLA  503 (534)
T ss_dssp             HCHHHHHHHHHSCCCC-HHHHHHHHHTCCC----CCCTTCCHHHHHHHTTTTSHHHHHHHHHHHTSCSCTTTTHHHHHHT
T ss_pred             HHHHHhhcCCCCCCCC-hHHHHHHHHcCCC----CcCCCCChHHHHHhCCccCChHHHHHHHHhcCCccccccccccccc
Confidence              0000000 000000 0111111111111    0112347889999999999999999999999999999999999999


Q ss_pred             hhhhccccCCCCHHHHhhhhhhhhcccc
Q 004183          703 KWYCVQRHSRASLERAQKMIFVAAHAKL  730 (770)
Q Consensus       703 g~I~t~kRnRL~~e~vekLvFl~~N~kL  730 (770)
                      |.|++++||||+++++++|+|++.|.++
T Consensus       504 ~~~~~~~r~~l~~~~~~~l~~~~~~~~~  531 (534)
T 2bw3_A          504 GNIITEKRNRIGQQTVDSLLFLNSFYKN  531 (534)
T ss_dssp             HHHHHCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccCcccccCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	770
d2bw3a2	447	c.55.3.12 (A:163-609) Transposase Hermes, catalyti	4e-08

>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]} Length = 447

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Hermes transposase-like
domain: Transposase Hermes, catalytic domain
species: House fly (Musca domestica) [TaxId: 7370]

 Score = 53.9 bits (128), Expect = 4e-08
 Identities = 43/372 (11%), Positives = 111/372 (29%), Gaps = 51/372 (13%)

Query: 381 NVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEYVEL 440
           NV   L   + +         V  +  E   ++   +     I    +K  +       L
Sbjct: 90  NVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSL 149

Query: 441 IRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSE 500
                   +C   +   + ML  +  +   +   + +       +               
Sbjct: 150 KS------ECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHI------------- 190

Query: 501 VFWNELEAVYSLVKLIKGMTQEIEAE-RPLIGQCLPLWEELRSKVKNWC---AKFSIPGE 556
              + ++ + +++   + + +E++    P +   +P   +++          A  +    
Sbjct: 191 -NKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKV 249

Query: 557 NVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKYLPPFKCLTEEQEKDVDKLITRLV 616
           N+ K V   + +N       AF   P  L             CL++ ++ ++   I R+ 
Sbjct: 250 NIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLEL---INRMS 306

Query: 617 SREEAHFALMELMKWRSEGLDPLYAQAVQVKQRDPITGKMRIANPQSSRLV--------- 667
           S  E     +      S     L + +  +        ++   N +   +          
Sbjct: 307 SFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYR 366

Query: 668 ---------------WETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSR 712
                          W     +Y  L K+A+ L+ + A+S   +  +S       ++ +R
Sbjct: 367 KEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNR 426

Query: 713 ASLERAQKMIFV 724
              +    ++F+
Sbjct: 427 IGQQTVDSLLFL 438

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	770
d2bw3a2	447	Transposase Hermes, catalytic domain {House fly (M	100.0
d2bw3a1	84	Transposase Hermes, dimerisation domain {House fly	97.52

>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Hermes transposase-like
domain: Transposase Hermes, catalytic domain
species: House fly (Musca domestica) [TaxId: 7370]

Probab=100.00  E-value=2.4e-42  Score=380.98  Aligned_cols=389  Identities=11%  Similarity=0.115  Sum_probs=270.8

Q ss_pred             ccceEEEecccccCCCCCCCCCCceeEEEeecCCCceeeeeeE---ecC-CCCCHHHHHHHHHHHHHhhhcCCcceEEEE
Q 004183          284 AMFFQVASDGWKIRTCCGDGDDDNLVKFTVNLPNGTSVYQKAL---ITG-GSVSSKLAEDVFWETVMGICGNGVQRCVGI  359 (770)
Q Consensus       284 a~~~sIttDgWTs~~~~~g~~~~s~i~~tvh~~~g~~~f~ksv---~~s-~~~ta~~i~e~L~~vIee~~~~g~~kVv~I  359 (770)
                      ..++++++|+||+.+     .+++|++|+|||++...+..+.+   .+. +.|||++|++.+.+++++| |+...+++++
T Consensus        10 ~~~~s~~~D~Wts~~-----~~~~~l~v~~~yi~~~~~~~~~L~~~~~~~~~~tg~~i~~~l~~~l~~~-~i~~~~~~~~   83 (447)
T d2bw3a2          10 KDGASATIDLWTDNY-----IKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQF-NVEDLSSIKF   83 (447)
T ss_dssp             TTCCEEEEEEEEETT-----TTEEEEEEEEEEEETTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHHTT-TCCCCTTCEE
T ss_pred             cCCEEEEEEeecCCC-----CCeEEEEEEEEEEECCceeEEEEEEEEeCCCCCcHHHHHHHHHHHHHHc-CCCcceEEEE
Confidence            457999999999975     35699999999987654433333   345 5799999999999999999 4455689999


Q ss_pred             Eech--hhHHHHHHHHhhcCcceecchhHHHHHHHHhHhhccCchhhhHHHHHHHHHHHHcCchHHHHHHHHHhhhcccc
Q 004183          360 VADK--YKAKALRNLETQNQWMVNVSCQLQGFLSLLKDFGKELPVFTSVRETCLKIGNFVNNKPQIRSSLRKHKMVGLEY  437 (770)
Q Consensus       360 VTDN--~~~kA~~~L~~k~~~i~~l~C~aH~LnLivkD~~k~l~~v~~vi~karkIv~ff~~s~~~~~~Lrk~q~q~~g~  437 (770)
                      +|||  ++.++       .+...+++|.+|+|||+++|+++.++.+.+++.++++++.||++++.....          .
T Consensus        84 ~~D~a~n~~~~-------~~~~~~i~C~aH~Lnl~v~d~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~----------~  146 (447)
T d2bw3a2          84 VTDRGANVVKS-------LANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRL----------R  146 (447)
T ss_dssp             EECCCHHHHHH-------TTTSEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGGGG----------C
T ss_pred             EcCCcHhhHHH-------hhccccccchhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHH----------h
Confidence            9999  33332       344578999999999999999988999999999999999999988743311          1


Q ss_pred             ccccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCccccchheeecChhHHHHHHHHHHHHHHHH
Q 004183          438 VELIRVPSNKCDCRNNFVHLFGMLEDVWSSARVLQMAVLDDSIKVSCMDDPVSREVVAIIQSEVFWNELEAVYSLVKLIK  517 (770)
Q Consensus       438 ~~Llr~~~t~~~~~tRW~S~y~mLerlle~k~aL~~l~~~e~~~~~~~~~~~a~ev~~ivld~~FW~~Le~vv~lLkP~~  517 (770)
                      ..+..+.      .|||+|.|.||+++++++.+|..++.+....              ..+...+|..++.++.+|+||.
T Consensus       147 ~~l~~~~------~trW~s~~~~l~~~~~~~~~i~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~  206 (447)
T d2bw3a2         147 SSLKSEC------PTRWNSTYTMLRSILDNWESVIQILSEAGET--------------QRIVHINKSIIQTMVNILDGFE  206 (447)
T ss_dssp             CCCCCSS------CGGGCHHHHHHHHHHHTHHHHHHHHHHTTCG--------------GGTTTCCHHHHHHHHHHHHTTH
T ss_pred             cccCCCC------ccchhhHHHHHHHHHHHHHHHHHHHHhcccc--------------ccCChHhHHHHHHHHHHHHHHH
Confidence            1233332      3599999999999999999999887643211              1234567999999999999999


Q ss_pred             HHHHHHhccC-CcccchHHHHHHHHHHHHHHhhhcCC---ChhhHHHHHHHHHhccCChHHHHHHHhCcccccccCCCCC
Q 004183          518 GMTQEIEAER-PLIGQCLPLWEELRSKVKNWCAKFSI---PGENVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDNSGKY  593 (770)
Q Consensus       518 ~at~~le~d~-ptls~V~Pl~~~L~~k~k~~~~~~~~---~~~~i~~~Id~Rw~~~~~pl~~aA~~LDPry~~kd~~~~y  593 (770)
                      .+++.++++. ++++.|+|.+..+...++........   ....+...+++||++.+...+.+|.+|||+++....    
T Consensus       207 ~~~~~l~~~~~~t~~~v~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~p~~~~~~~----  282 (447)
T d2bw3a2         207 RIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQ----  282 (447)
T ss_dssp             HHHHHHTCSSSCCGGGHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHHTTGGGCCHHHHHHHHTSGGGTTSCC----
T ss_pred             HHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhcccchHHHHHHhcCCcccchhh----
Confidence            9999999887 89999999888776554322211100   012467788899998888889999999999843211    


Q ss_pred             CCCCCcchHHHHHHHHHHHHHhcC----------------c-HHHHHHHHHHhhhhhcCCC---hHHHH-----------
Q 004183          594 LPPFKCLTEEQEKDVDKLITRLVS----------------R-EEAHFALMELMKWRSEGLD---PLYAQ-----------  642 (770)
Q Consensus       594 lp~~~~lt~e~~~~v~~~i~rl~~----------------~-~e~~~~l~El~~~r~e~~d---~~~~~-----------  642 (770)
                         .. ... ........+..+..                . ........+..... ....   ..+..           
T Consensus       283 ---~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  356 (447)
T d2bw3a2         283 ---EK-VAQ-IKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHS-KDISTTSFFFPQLTQNNSREPPV  356 (447)
T ss_dssp             ---SC-HHH-HHHHHHHHHHHHHHHHHHHHTTCSCSSSCCC-----------------CCCHHHHHCHHHHHHHHHSCCC
T ss_pred             ---hH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccchh-hhhhcccchhHHhhhhccccccc
Confidence               10 111 01111111111100                0 00000000000000 0000   00000           


Q ss_pred             ----HHHhhccCcccccccccCCCchhhHhhhhccccchHHHHHHHHhcccccCcccccccccchhhhccccCCCCHHHH
Q 004183          643 ----AVQVKQRDPITGKMRIANPQSSRLVWETCLSEYKSLGKVAVRLIFLHATSFGFKCNWSFMKWYCVQRHSRASLERA  718 (770)
Q Consensus       643 ----~~~~~~~~~~~~~~~~~~p~sp~~WW~~~~~~fP~L~kLA~riLsipaSS~~sER~FS~~g~I~t~kRnRL~~e~v  718 (770)
                          ....+..++    .......+|+.||+.+...||.|+++|+++|++|+||+.|||+||..+.|++++||||+++++
T Consensus       357 ~~~~el~~yl~~~----~~~~~~~~~l~~W~~~~~~yP~L~~lA~~~Lsip~tsa~~ER~FS~~~~i~t~~R~~L~~e~l  432 (447)
T d2bw3a2         357 CPSDEFEFYRKEI----VILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTV  432 (447)
T ss_dssp             CHHHHHHHHHTCC----CCCCTTCCHHHHHHHTTTTSHHHHHHHHHHHTSCSCTTTTHHHHHHTHHHHHCTTTCCCHHHH
T ss_pred             ccHHHHHHHhcCc----cccCCCCCHHHHHHHCCcccHHHHHHHHHHhCCCCcccHHHHHHhccccccCcccCCCCHHHH
Confidence                011111111    011123368899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhccc
Q 004183          719 QKMIFVAAHAK  729 (770)
Q Consensus       719 ekLvFl~~N~k  729 (770)
                      ++|+||+.|.|
T Consensus       433 e~L~~l~~~~k  443 (447)
T d2bw3a2         433 DSLLFLNSFYK  443 (447)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999999976

>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}

class: All alpha proteins
fold: Hermes dimerisation domain
superfamily: Hermes dimerisation domain
family: Hermes dimerisation domain
domain: Transposase Hermes, dimerisation domain
species: House fly (Musca domestica) [TaxId: 7370]

Probab=97.52  E-value=0.00018  Score=57.97  Aligned_cols=63  Identities=17%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCccccccCCHHHHHHHHHc---C--C----C----CCChhhHHHHHHHHHHHHHHH
Q 004183          210 VLSKDQIDSAVELLTDWFYDSCGSVSFSSFDHPKFRAFLSQV---G--L----P----VVSRKEVLDARLDRKFVEAKT  275 (770)
Q Consensus       210 ~~~k~q~~~a~~~ia~~i~~~~~~iPfs~VE~p~Fr~~l~~l---~--~----~----~PSr~~l~~~~L~~~y~evk~  275 (770)
                      ..+.+..+.+.+.++.|++++  +.|||+|+..||++|+..+   |  |    .    +|++.+|+.+ +...|++-++
T Consensus         7 ~vs~~~K~k~~~a~~qW~V~n--CRp~siv~dsGlkklv~~fl~iGA~yG~nv~vddLlP~p~tis~~-i~~~yeekr~   82 (84)
T d2bw3a1           7 TVSADCKKEAIEKCAQWVVRD--CRPFSAVSGSGFIDMIKFFIKVKAEYGEHVNVEELLPSPITLSRK-VTSDAKEKKA   82 (84)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHT--TCCGGGGGCHHHHHHHHHHHHHHHHHCSCBCHHHHSCCHHHHHHH-HHHHHHHHHH
T ss_pred             hhhHHhHHHHHHHHHHHHHhc--CcccchhccccHHHHHHHHHHHhHHhcccCCHhHcCCCchhHHHH-HHHHHHHHhc
Confidence            347888899999999999999  8999999999999999876   3  2    1    8999999876 5566777654