Citrus Sinensis ID: 004370
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SE83 | 914 | Dynamin-2A OS=Arabidopsis | yes | no | 0.992 | 0.822 | 0.725 | 0.0 | |
| Q9LQ55 | 920 | Dynamin-2B OS=Arabidopsis | no | no | 0.992 | 0.817 | 0.710 | 0.0 | |
| Q9FNX5 | 624 | Dynamin-related protein 1 | no | no | 0.445 | 0.541 | 0.296 | 5e-45 | |
| Q8S3C9 | 612 | Dynamin-related protein 1 | no | no | 0.437 | 0.542 | 0.307 | 6e-44 | |
| Q8LF21 | 614 | Dynamin-related protein 1 | no | no | 0.436 | 0.539 | 0.295 | 3e-42 | |
| Q84XF3 | 610 | Dynamin-related protein 1 | no | no | 0.459 | 0.570 | 0.286 | 2e-41 | |
| P42697 | 610 | Dynamin-related protein 1 | no | no | 0.439 | 0.545 | 0.308 | 1e-40 | |
| Q39828 | 610 | Dynamin-related protein 5 | no | no | 0.432 | 0.537 | 0.281 | 4e-39 | |
| Q39821 | 610 | Dynamin-related protein 1 | no | no | 0.432 | 0.537 | 0.278 | 2e-38 | |
| P54861 | 757 | Dynamin-related protein D | yes | no | 0.501 | 0.501 | 0.223 | 1e-18 |
| >sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2 | Back alignment and function desciption |
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Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/769 (72%), Positives = 655/769 (85%), Gaps = 17/769 (2%)
Query: 1 MDDAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEG 60
+D++MI++Y + +DA+LLVI+PA+Q ++SS RAL+IAKE+D +STRT+GII K+DQA
Sbjct: 152 VDESMIAEYAQHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAE 211
Query: 61 DSKALAAVRALLLNQGPPKTSDIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETL 120
+SKALAAV+ALL NQGPPKT+DIPWVAVIGQSV+I+S S + ++SLE AWRAE E+L
Sbjct: 212 NSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQS--GSGENSLETAWRAESESL 269
Query: 121 KRLLSGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGLQGKSQIVQDELLKLGDQILE 180
K +L+GAPQ+KLGR+ALVDT+A QIR+RM LR+P +LSGLQGKSQIVQDEL +LG+Q++
Sbjct: 270 KSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVN 329
Query: 181 NTEGTKALALQLCREFEDKFLQHITGGEGNGWKVVASFEGNFPNRMKQLPLDRHFDMKNV 240
+ EGT+A+AL+LCREFEDKFL H+ GGEG+GWKVVASFEGNFPNR+KQLPLDRHFD+ NV
Sbjct: 330 SAEGTRAIALELCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNV 389
Query: 241 KRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPG 300
KRVVLEADGYQPYLISPEKGLRSLIK VLE+AK+P+RLCVDEVHRVLVDIVSA+ANATPG
Sbjct: 390 KRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLVDIVSASANATPG 449
Query: 301 LGRYPPFKREVVEIASAALDRFKSDAKKMVVALVDMERVFVPPQHFIRLVQRRQRREEEQ 360
LGRYPPFKREVV IASAALD FK++AKKMVVALVDMER FVPPQHFIRLVQRR R+ +
Sbjct: 450 LGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRRE 509
Query: 361 ---KYRSSKKAADAEQSILNRATSPQTGGPESGGSLKSMKDKSSPQDKDVQEGSTLKTAG 417
K RSSKK DAEQS+L+RATSPQ GP +GGSLKSMKDK SPQDK+ E S LKTAG
Sbjct: 510 EELKGRSSKKGQDAEQSLLSRATSPQPDGPTAGGSLKSMKDKPSPQDKETPEVSGLKTAG 569
Query: 418 PGGEITAGFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTLEECYIEEVV 477
P GEITAG+L+KKS+KTNGWS+RWFVLNEKTGKLGYTKKQEER+FRG +TLEEC IEE+
Sbjct: 570 PEGEITAGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTITLEECTIEEIP 629
Query: 478 EDEDAKSSKDKKKQAE----KGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLN 533
EDE KS K K+A KGP L+FKIT KVPYKTVLKAH+AL+LKAE++ +K EW+N
Sbjct: 630 EDEVEKSKSSKDKKANGPDSKGPGLVFKITCKVPYKTVLKAHNALVLKAESVVDKNEWIN 689
Query: 534 KLRVVIQARGGDVRRDSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLN 593
KL+ VIQARGG V S MRQS S+GSLD M RKP DPEEELRWM+QEVRGYVEAVLN
Sbjct: 690 KLQKVIQARGGQVGSVS---MRQSLSEGSLDKMVRKPIDPEEELRWMSQEVRGYVEAVLN 746
Query: 594 SLNANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTERIGELLQEDKNAKSRRELCQKQST 653
SL ANVPKAVVLCQVEKAKEDMLNQLYSSISA ERI L+QED+N K RRE QKQS+
Sbjct: 747 SLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSS 806
Query: 654 LLSKLIRQLGVHDNRAAAATTWSNDAVEPESSPRNSGSAGGDEWRNAFDAAANGPTDSF- 712
LLSKL RQL +HDNRAAAA+++S+++ ESSPR SG + GD+W NAF++AANGP+DS
Sbjct: 807 LLSKLTRQLSIHDNRAAAASSYSDNS-GTESSPRASGGSSGDDWMNAFNSAANGPSDSLS 865
Query: 713 RSGSNGHSRRYSDPAQNGDER---SGLSSRRTPSRLPPPPPQSGSSYRF 758
+ GS GHSRRYSDPAQNGD SG + R TP+RLPP PP +GS+YR+
Sbjct: 866 KYGSGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTGSAYRY 914
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Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P). Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5 |
| >sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2 | Back alignment and function description |
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| >sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1 | Back alignment and function description |
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| >sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3 | Back alignment and function description |
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| >sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1 | Back alignment and function description |
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| >sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1 | Back alignment and function description |
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| >sp|P54861|DNM1_YEAST Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DNM1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | ||||||
| 225465253 | 920 | PREDICTED: dynamin-2B [Vitis vinifera] g | 0.996 | 0.820 | 0.754 | 0.0 | |
| 224120026 | 917 | predicted protein [Populus trichocarpa] | 0.990 | 0.818 | 0.767 | 0.0 | |
| 356563206 | 914 | PREDICTED: dynamin-2B-like [Glycine max] | 0.996 | 0.826 | 0.747 | 0.0 | |
| 224129484 | 915 | predicted protein [Populus trichocarpa] | 0.990 | 0.820 | 0.770 | 0.0 | |
| 225460010 | 931 | PREDICTED: dynamin-2B [Vitis vinifera] g | 0.973 | 0.792 | 0.734 | 0.0 | |
| 356522123 | 914 | PREDICTED: dynamin-2B-like [Glycine max] | 0.996 | 0.826 | 0.735 | 0.0 | |
| 6651399 | 914 | dynamin-like protein 6 [Arabidopsis thal | 0.992 | 0.822 | 0.725 | 0.0 | |
| 15218486 | 914 | dynamin-2A [Arabidopsis thaliana] gi|685 | 0.992 | 0.822 | 0.725 | 0.0 | |
| 110737889 | 914 | putative phragmoplastin [Arabidopsis tha | 0.992 | 0.822 | 0.724 | 0.0 | |
| 15218837 | 920 | dynamin-2B [Arabidopsis thaliana] gi|597 | 0.992 | 0.817 | 0.710 | 0.0 |
| >gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/771 (75%), Positives = 665/771 (86%), Gaps = 16/771 (2%)
Query: 1 MDDAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEG 60
+DD+MIS YV+ +DA+LLVI PA Q P++SS RALRIAKE+DADSTRT+G+ISK+DQA G
Sbjct: 153 VDDSMISGYVQHNDAILLVITPAAQAPEISSSRALRIAKEYDADSTRTIGVISKIDQAAG 212
Query: 61 DSKALAAVRALLLNQGPPKTSDIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETL 120
+ K LAAV+ALL NQGP TSDIPWVA+IGQSV+I+S S A +++SLE AWRAE ETL
Sbjct: 213 EPKILAAVQALLSNQGPRSTSDIPWVALIGQSVSIASAQSGNAGSENSLETAWRAESETL 272
Query: 121 KRLLSGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGLQGKSQIVQDELLKLGDQILE 180
K +L GAPQNKLGRVALVD +A QIRNRM +R+P LLSGLQGKSQIVQ+EL++LG+Q+++
Sbjct: 273 KSILPGAPQNKLGRVALVDALAQQIRNRMKVRLPNLLSGLQGKSQIVQEELVRLGEQMVD 332
Query: 181 NTEGTKALALQLCREFEDKFLQHITGGEGNGWKVVASFEGNFPNRMKQLPLDRHFDMKNV 240
+ EGT+A+ALQLCREFEDKFLQH+ GEG+GWKVVASFEGNFPNR+KQLPLD+HFD+ NV
Sbjct: 333 SVEGTRAIALQLCREFEDKFLQHLAHGEGSGWKVVASFEGNFPNRIKQLPLDKHFDINNV 392
Query: 241 KRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPG 300
KR+VLEADGYQPYLISPEKGLRSLIK VLE+AKEPSRLCVDEVHRVLVDIVSAAANATPG
Sbjct: 393 KRIVLEADGYQPYLISPEKGLRSLIKIVLELAKEPSRLCVDEVHRVLVDIVSAAANATPG 452
Query: 301 LGRYPPFKREVVEIASAALDRFKSDAKKMVVALVDMERVFVPPQHFIRLVQR---RQRRE 357
LGRYPPFKREVV IAS AL+ FK++AKKMVVALVDMER FVPPQHFIRLVQR RQRRE
Sbjct: 453 LGRYPPFKREVVAIASTALEGFKNEAKKMVVALVDMERAFVPPQHFIRLVQRRMDRQRRE 512
Query: 358 EEQKYRSSKKAADAEQSILNRATSPQTGGPESGGSLKSMKDKSSPQDKDVQEGSTLKTAG 417
EE K RSSKK DAEQSILNRATSPQTGG ++GGSLK+MKDKSS QDK+ QEG LKTAG
Sbjct: 513 EEVKNRSSKKGLDAEQSILNRATSPQTGGQQTGGSLKTMKDKSSQQDKEGQEGPALKTAG 572
Query: 418 PGGEITAGFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTLEECYIEEVV 477
PGGEITAGFLLK+S+KTNGWS+RWFVLNEK+ KLGYTKKQEERHFRGV+ LEEC IEE+
Sbjct: 573 PGGEITAGFLLKRSAKTNGWSRRWFVLNEKSSKLGYTKKQEERHFRGVINLEECNIEEIA 632
Query: 478 EDEDAKSSKDKKKQAEKG----PSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLN 533
DED K K + E G PSL+FKITSKVPYKTVLKAHSA++LKAE+ +K EWLN
Sbjct: 633 -DEDEPPPKSSKSKKENGPEKSPSLVFKITSKVPYKTVLKAHSAVVLKAESAVDKAEWLN 691
Query: 534 KLRVVIQARGGDVRRDSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLN 593
KLR VIQ G V+ +S MRQS SDGSLDTMAR+PADPEEELRWM+QEVRGYVEAVLN
Sbjct: 692 KLRNVIQP-SGQVKGESGLTMRQSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLN 750
Query: 594 SLNANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTERIGELLQEDKNAKSRRELCQKQST 653
SL ANVPKAVVLCQVEK+KEDMLNQLYSS+SAQST RI ELLQED+N K RRE QKQS+
Sbjct: 751 SLAANVPKAVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEDQNVKRRRERNQKQSS 810
Query: 654 LLSKLIRQLGVHDNRAAAATTWSNDAVEPESSPRNSGSAGGDEWRNAFDAAANGPTDSF- 712
LL+KL +QL +HDNRAAAA++ ++ ESSPR G + GD+WR+AFDAAANGPTDS+
Sbjct: 811 LLAKLTKQLSIHDNRAAAASSSWSNG-GAESSPRTPGPSSGDDWRSAFDAAANGPTDSYS 869
Query: 713 ---RSGSNGHSRRYSDPAQNGDERSGLS--SRRTPSRLPPPPPQSGSSYRF 758
RSG+NGHSRRYSDP+QNGD SG + SRRTP+RLPP PPQSGSSYR+
Sbjct: 870 NSSRSGANGHSRRYSDPSQNGDANSGPNSGSRRTPNRLPPAPPQSGSSYRY 920
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120026|ref|XP_002331118.1| predicted protein [Populus trichocarpa] gi|222872846|gb|EEF09977.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356563206|ref|XP_003549855.1| PREDICTED: dynamin-2B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224129484|ref|XP_002328728.1| predicted protein [Populus trichocarpa] gi|222839026|gb|EEE77377.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225460010|ref|XP_002271285.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297734796|emb|CBI17030.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356522123|ref|XP_003529699.1| PREDICTED: dynamin-2B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|6651399|gb|AAF22291.1|AF180732_1 dynamin-like protein 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15218486|ref|NP_172500.1| dynamin-2A [Arabidopsis thaliana] gi|68566309|sp|Q9SE83.2|DRP2A_ARATH RecName: Full=Dynamin-2A; AltName: Full=Dynamin-like protein 6; AltName: Full=Dynamin-related protein 2A gi|332190441|gb|AEE28562.1| dynamin-2A [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110737889|dbj|BAF00882.1| putative phragmoplastin [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15218837|ref|NP_176170.1| dynamin-2B [Arabidopsis thaliana] gi|59799374|sp|Q9LQ55.2|DRP2B_ARATH RecName: Full=Dynamin-2B; AltName: Full=Dynamin-like protein 3; AltName: Full=Dynamin-related protein 2B gi|6526969|dbj|BAA88111.1| dynamin-like protein [Arabidopsis thaliana] gi|15146179|gb|AAK83573.1| At1g59610/T30E16_17 [Arabidopsis thaliana] gi|23397259|gb|AAN31911.1| putative dynamin protein [Arabidopsis thaliana] gi|32815841|gb|AAP88329.1| At1g59610/T30E16_17 [Arabidopsis thaliana] gi|332195473|gb|AEE33594.1| dynamin-2B [Arabidopsis thaliana] gi|343455578|gb|AEM36363.1| At1g59610 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | ||||||
| TAIR|locus:2012763 | 914 | ADL6 "dynamin-like protein 6" | 0.956 | 0.793 | 0.714 | 8.9e-276 | |
| TAIR|locus:2202847 | 920 | DL3 "dynamin-like 3" [Arabidop | 0.957 | 0.789 | 0.697 | 1.2e-271 | |
| TAIR|locus:2101482 | 624 | DL1E "DYNAMIN-like 1E" [Arabid | 0.437 | 0.532 | 0.301 | 5.1e-57 | |
| TAIR|locus:2042371 | 612 | DL1D "DYNAMIN-like 1D" [Arabid | 0.437 | 0.542 | 0.310 | 1.2e-54 | |
| TAIR|locus:2006777 | 614 | DL1C "DYNAMIN-like 1C" [Arabid | 0.435 | 0.537 | 0.303 | 4.6e-51 | |
| TAIR|locus:2076780 | 610 | DL1B "DYNAMIN-like 1B" [Arabid | 0.436 | 0.542 | 0.289 | 1.2e-46 | |
| UNIPROTKB|Q39821 | 610 | Q39821 "Dynamin-related protei | 0.436 | 0.542 | 0.286 | 7.1e-44 | |
| TAIR|locus:2165805 | 610 | DL1 "dynamin-like protein" [Ar | 0.435 | 0.540 | 0.312 | 1e-38 | |
| SGD|S000003924 | 757 | DNM1 "Dynamin-related GTPase i | 0.510 | 0.511 | 0.222 | 6.4e-23 | |
| ASPGD|ASPL0000044708 | 794 | AN8874 [Emericella nidulans (t | 0.510 | 0.487 | 0.202 | 3.5e-22 |
| TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2651 (938.3 bits), Expect = 8.9e-276, P = 8.9e-276
Identities = 528/739 (71%), Positives = 616/739 (83%)
Query: 1 MDDAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEG 60
+D++MI++Y + +DA+LLVI+PA+Q ++SS RAL+IAKE+D +STRT+GII K+DQA
Sbjct: 152 VDESMIAEYAQHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAE 211
Query: 61 DSKALAAVRALLLNQGPPKTSDIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETL 120
+SKALAAV+ALL NQGPPKT+DIPWVAVIGQSV+I+S S + ++SLE AWRAE E+L
Sbjct: 212 NSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQSG--SGENSLETAWRAESESL 269
Query: 121 KRLLSGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGLQGKSQIVQDELLKLGDQILE 180
K +L+GAPQ+KLGR+ALVDT+A QIR+RM LR+P +LSGLQGKSQIVQDEL +LG+Q++
Sbjct: 270 KSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVN 329
Query: 181 NTEGTKALALQLCREFEDKFLQHITGGEGNGWKVVASFEGNFPNRMKQLPLDRHFDMKNV 240
+ EGT+A+AL+LCREFEDKFL H+ GGEG+GWKVVASFEGNFPNR+KQLPLDRHFD+ NV
Sbjct: 330 SAEGTRAIALELCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNV 389
Query: 241 KRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPG 300
KRVVLEADGYQPYLISPEKGLRSLIK VLE+AK+P+RLCVDEVHRVLVDIVSA+ANATPG
Sbjct: 390 KRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLVDIVSASANATPG 449
Query: 301 LGRYPPFKREVVEIASAALDRFKSDAKKMVVALVDMERVFVPPQHFIRLVXXXXXXXXXX 360
LGRYPPFKREVV IASAALD FK++AKKMVVALVDMER FVPPQHFIRLV
Sbjct: 450 LGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRRE 509
Query: 361 ---KYRSSKKAADAEQSILNRATSPQTGGPESGGSLKSMKDKSSPQDKDVQEGSTLKTAG 417
K RSSKK DAEQS+L+RATSPQ GP +GGSLKSMKDK SPQDK+ E S LKTAG
Sbjct: 510 EELKGRSSKKGQDAEQSLLSRATSPQPDGPTAGGSLKSMKDKPSPQDKETPEVSGLKTAG 569
Query: 418 PGGEITAGFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTLEECYIXXXX 477
P GEITAG+L+KKS+KTNGWS+RWFVLNEKTGKLGYTKKQEER+FRG +TLEEC I
Sbjct: 570 PEGEITAGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTITLEECTIEEIP 629
Query: 478 XXXXXXXXXXXXXXX----XXGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLN 533
GP L+FKIT KVPYKTVLKAH+AL+LKAE++ +K EW+N
Sbjct: 630 EDEVEKSKSSKDKKANGPDSKGPGLVFKITCKVPYKTVLKAHNALVLKAESVVDKNEWIN 689
Query: 534 KLRVVIQARGGDVRRDSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLN 593
KL+ VIQARGG V S MRQS S+GSLD M RKP DPEEELRWM+QEVRGYVEAVLN
Sbjct: 690 KLQKVIQARGGQVGSVS---MRQSLSEGSLDKMVRKPIDPEEELRWMSQEVRGYVEAVLN 746
Query: 594 SLNANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTERIGELLQEDKNAKSRRELCQKQST 653
SL ANVPKAVVLCQVEKAKEDMLNQLYSSISA ERI L+QED+N K RRE QKQS+
Sbjct: 747 SLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSS 806
Query: 654 LLSKLIRQLGVHDNRAAAATTWSNDAVEPESSPRNSGSAGGDEWRNAFDAAANGPTDSF- 712
LLSKL RQL +HDNRAAAA+++S+++ ESSPR SG + GD+W NAF++AANGP+DS
Sbjct: 807 LLSKLTRQLSIHDNRAAAASSYSDNS-GTESSPRASGGSSGDDWMNAFNSAANGPSDSLS 865
Query: 713 RSGSNGHSRRYSDPAQNGD 731
+ GS GHSRRYSDPAQNGD
Sbjct: 866 KYGSGGHSRRYSDPAQNGD 884
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| TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2101482 DL1E "DYNAMIN-like 1E" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2042371 DL1D "DYNAMIN-like 1D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2006777 DL1C "DYNAMIN-like 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076780 DL1B "DYNAMIN-like 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q39821 Q39821 "Dynamin-related protein 12A" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
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| TAIR|locus:2165805 DL1 "dynamin-like protein" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| SGD|S000003924 DNM1 "Dynamin-related GTPase involved in mitochondrial organization" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000044708 AN8874 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LQ55 | DRP2B_ARATH | 3, ., 6, ., 5, ., 5 | 0.7109 | 0.9920 | 0.8173 | no | no |
| Q9SE83 | DRP2A_ARATH | 3, ., 6, ., 5, ., 5 | 0.7256 | 0.9920 | 0.8227 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.6.5.5 | 0.991 |
| 3rd Layer | 3.6.5 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 758 | |||
| pfam01031 | 296 | pfam01031, Dynamin_M, Dynamin central region | 2e-25 | |
| cd08771 | 278 | cd08771, DLP_1, Dynamin_like protein family includ | 2e-18 | |
| cd01235 | 106 | cd01235, PH_Sbf1_hMTMR5, Set binding factor 1 (als | 2e-10 | |
| pfam02212 | 90 | pfam02212, GED, Dynamin GTPase effector domain | 8e-10 | |
| smart00233 | 102 | smart00233, PH, Pleckstrin homology domain | 1e-08 | |
| cd01252 | 118 | cd01252, PH_GRP1-like, General Receptor for Phosph | 1e-08 | |
| pfam00169 | 101 | pfam00169, PH, PH domain | 4e-08 | |
| smart00302 | 92 | smart00302, GED, Dynamin GTPase effector domain | 5e-08 | |
| cd13276 | 117 | cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin | 2e-07 | |
| cd00821 | 92 | cd00821, PH, Pleckstrin homology (PH) domain | 7e-07 | |
| cd13301 | 108 | cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin | 8e-07 | |
| cd13288 | 120 | cd13288, PH_Ses, Sesquipedalian family Pleckstrin | 2e-06 | |
| cd13263 | 114 | cd13263, PH_RhoGap25-like, Rho GTPase activating p | 7e-06 | |
| cd13250 | 98 | cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin | 1e-05 | |
| cd13273 | 110 | cd13273, PH_SWAP-70, Switch-associated protein-70 | 7e-05 | |
| cd13282 | 96 | cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology | 7e-05 | |
| cd13291 | 107 | cd13291, PH_ORP10_ORP11, Human Oxysterol binding p | 1e-04 | |
| cd13378 | 116 | cd13378, PH_RhoGAP2, Rho GTPase activating protein | 1e-04 | |
| cd01265 | 101 | cd01265, PH_TBC1D2A, TBC1 domain family member 2A | 1e-04 | |
| smart00053 | 240 | smart00053, DYNc, Dynamin, GTPase | 2e-04 | |
| cd13260 | 103 | cd13260, PH_RASA1, RAS p21 protein activator (GTPa | 3e-04 | |
| cd13293 | 88 | cd13293, PH_CpORP2-like, Cryptosporidium-like Oxys | 4e-04 | |
| cd13289 | 90 | cd13289, PH_Osh3p_yeast, Yeast oxysterol binding p | 5e-04 | |
| cd01251 | 105 | cd01251, PH2_ADAP, ArfGAP with dual PH domains Ple | 7e-04 | |
| pfam00350 | 168 | pfam00350, Dynamin_N, Dynamin family | 0.001 | |
| cd13298 | 106 | cd13298, PH1_PH_fungal, Fungal proteins Pleckstrin | 0.001 | |
| cd01247 | 100 | cd01247, PH_FAPP1_FAPP2, Four phosphate adaptor pr | 0.002 | |
| cd13284 | 99 | cd13284, PH_OSBP_ORP4, Human Oxysterol binding pro | 0.004 | |
| cd13324 | 103 | cd13324, PH_Gab-like, Grb2-associated binding prot | 0.004 | |
| cd01233 | 111 | cd01233, PH_KIFIA_KIFIB, KIFIA and KIFIB protein p | 0.004 |
| >gnl|CDD|216255 pfam01031, Dynamin_M, Dynamin central region | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 22/227 (9%)
Query: 148 RMSLRVPKLLSGLQGKSQIVQDELLKLGDQILENTEGTKALALQLCREFEDKFLQHITGG 207
R SL P L S + K Q + EL + GD E+ A L L F F I G
Sbjct: 75 RKSL--PDLKSQINKKLQETEKELERYGDDPPEDPAEKGAFLLDLITAFNQDFKNLIDGE 132
Query: 208 EGNGWKVVASFEGN------------FPNRMKQLPLDRHFDMKNVKRVVLEADGYQPYLI 255
E +++ E + FP +K + + ++ + G + L
Sbjct: 133 E----DDLSTNELSGGARIRYIFHEWFPKLLKSIDPFEKLSDEEIRTAIRNYRGRRLPLF 188
Query: 256 SPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPGLGRYPPFKREVVEIA 315
PEK L+K ++ +EP+ CVD V+ L I A+ L R+P K + E+
Sbjct: 189 VPEKAFELLVKKQIKRLEEPALKCVDLVYEELRRIFLKIAS--KELSRFPNLKEAIKEVV 246
Query: 316 SAALDRFKSDAKKMVVALVDMERVFVPPQH--FIRLVQRRQRREEEQ 360
L +KMV L+DME ++ H FI +Q +++EEE+
Sbjct: 247 EDILREQLEPTEKMVRDLIDMELAYINTNHPDFIGGLQAVKKKEEEE 293
|
This region lies between the GTPase domain, see pfam00350, and the pleckstrin homology (PH) domain, see pfam00169. Length = 296 |
| >gnl|CDD|206738 cd08771, DLP_1, Dynamin_like protein family includes dynamins and Mx proteins | Back alignment and domain information |
|---|
| >gnl|CDD|241268 cd01235, PH_Sbf1_hMTMR5, Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain | Back alignment and domain information |
|---|
| >gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|241283 cd01252, PH_GRP1-like, General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|215766 pfam00169, PH, PH domain | Back alignment and domain information |
|---|
| >gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain | Back alignment and domain information |
|---|
| >gnl|CDD|241430 cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin homolog (PH) 1 (AtPH1) PH domain | Back alignment and domain information |
|---|
| >gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241455 cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin homology (PH) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241442 cd13288, PH_Ses, Sesquipedalian family Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241417 cd13263, PH_RhoGap25-like, Rho GTPase activating protein 25 and related proteins Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241404 cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241427 cd13273, PH_SWAP-70, Switch-associated protein-70 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241436 cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241445 cd13291, PH_ORP10_ORP11, Human Oxysterol binding protein (OSBP) related proteins 10 and 11 (ORP10 and ORP11) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241529 cd13378, PH_RhoGAP2, Rho GTPase activating protein 2 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241296 cd01265, PH_TBC1D2A, TBC1 domain family member 2A pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|197491 smart00053, DYNc, Dynamin, GTPase | Back alignment and domain information |
|---|
| >gnl|CDD|241414 cd13260, PH_RASA1, RAS p21 protein activator (GTPase activating protein) 1 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241447 cd13293, PH_CpORP2-like, Cryptosporidium-like Oxysterol binding protein related protein 2 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241443 cd13289, PH_Osh3p_yeast, Yeast oxysterol binding protein homolog 3 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241282 cd01251, PH2_ADAP, ArfGAP with dual PH domains Pleckstrin homology (PH) domain, repeat 2 | Back alignment and domain information |
|---|
| >gnl|CDD|215874 pfam00350, Dynamin_N, Dynamin family | Back alignment and domain information |
|---|
| >gnl|CDD|241452 cd13298, PH1_PH_fungal, Fungal proteins Pleckstrin homology (PH) domain, repeat 1 | Back alignment and domain information |
|---|
| >gnl|CDD|241278 cd01247, PH_FAPP1_FAPP2, Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241438 cd13284, PH_OSBP_ORP4, Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241478 cd13324, PH_Gab-like, Grb2-associated binding protein family Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241266 cd01233, PH_KIFIA_KIFIB, KIFIA and KIFIB protein pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| KOG0446 | 657 | consensus Vacuolar sorting protein VPS1, dynamin, | 100.0 | |
| PF01031 | 295 | Dynamin_M: Dynamin central region; InterPro: IPR00 | 100.0 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 99.92 | |
| smart00302 | 92 | GED Dynamin GTPase effector domain. | 99.83 | |
| smart00053 | 240 | DYNc Dynamin, GTPase. Large GTPases that mediate v | 99.74 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 99.74 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 99.72 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 99.71 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 99.71 | |
| PF02212 | 92 | GED: Dynamin GTPase effector domain; InterPro: IPR | 99.7 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 99.7 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 99.69 | |
| KOG0447 | 980 | consensus Dynamin-like GTP binding protein [Genera | 99.67 | |
| KOG0930 | 395 | consensus Guanine nucleotide exchange factor Cytoh | 99.67 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 99.66 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 99.65 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 99.63 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 99.62 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 99.59 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 99.59 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 99.57 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 99.51 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 99.47 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 99.47 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 99.43 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 99.41 | |
| cd01263 | 122 | PH_anillin Anillin Pleckstrin homology (PH) domain | 99.29 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 99.28 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 99.25 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 99.24 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 99.19 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 99.17 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 99.16 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 99.07 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 99.02 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 98.91 | |
| cd01230 | 117 | PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 | 98.82 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 98.8 | |
| COG0699 | 546 | Predicted GTPases (dynamin-related) [General funct | 98.69 | |
| KOG1090 | 1732 | consensus Predicted dual-specificity phosphatase [ | 98.69 | |
| cd01234 | 117 | PH_CADPS CADPS (Ca2+-dependent activator protein) | 98.47 | |
| PF15410 | 119 | PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN | 98.3 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 98.24 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 98.05 | |
| cd01259 | 114 | PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr | 97.97 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.96 | |
| PF14593 | 104 | PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A. | 97.9 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 97.87 | |
| KOG3640 | 1116 | consensus Actin binding protein Anillin [Cell cycl | 97.84 | |
| cd01243 | 122 | PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin | 97.82 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.79 | |
| cd01249 | 104 | PH_oligophrenin Oligophrenin Pleckstrin homology ( | 97.59 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 97.57 | |
| cd01239 | 117 | PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom | 97.35 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 97.35 | |
| KOG1739 | 611 | consensus Serine/threonine protein kinase GPBP [Si | 96.93 | |
| KOG3751 | 622 | consensus Growth factor receptor-bound proteins (G | 96.9 | |
| KOG0248 | 936 | consensus Cytoplasmic protein Max-1, contains PH, | 96.88 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 96.78 | |
| PLN02866 | 1068 | phospholipase D | 96.6 | |
| KOG3531 | 1036 | consensus Rho guanine nucleotide exchange factor C | 96.54 | |
| PLN00188 | 719 | enhanced disease resistance protein (EDR2); Provis | 96.36 | |
| cd01224 | 109 | PH_Collybistin Collybistin pleckstrin homology (PH | 96.32 | |
| cd01240 | 116 | PH_beta-ARK Beta adrenergic receptor kinase 1(beta | 95.99 | |
| cd01262 | 89 | PH_PDK1 3-Phosphoinositide dependent protein kinas | 95.8 | |
| KOG1117 | 1186 | consensus Rho- and Arf-GTPase activating protein A | 95.35 | |
| cd01258 | 108 | PH_syntrophin Syntrophin pleckstrin homology (PH) | 95.3 | |
| PF15406 | 112 | PH_6: Pleckstrin homology domain | 95.01 | |
| KOG0932 | 774 | consensus Guanine nucleotide exchange factor EFA6 | 94.92 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 94.83 | |
| KOG1451 | 812 | consensus Oligophrenin-1 and related Rho GTPase-ac | 94.47 | |
| cd01225 | 111 | PH_Cool_Pix Cool (cloned out of library)/Pix (PAK- | 94.39 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 94.39 | |
| KOG1738 | 638 | consensus Membrane-associated guanylate kinase-int | 94.25 | |
| KOG4807 | 593 | consensus F-actin binding protein, regulates actin | 93.95 | |
| KOG1737 | 799 | consensus Oxysterol-binding protein [Lipid transpo | 93.05 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 91.71 | |
| cd01221 | 125 | PH_ephexin Ephexin Pleckstrin homology (PH) domain | 91.71 | |
| KOG3543 | 1218 | consensus Ca2+-dependent activator protein [Signal | 91.68 | |
| cd01226 | 100 | PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin | 91.48 | |
| KOG3723 | 851 | consensus PH domain protein Melted [Signal transdu | 91.33 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 90.96 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 90.73 | |
| PF15404 | 185 | PH_4: Pleckstrin homology domain | 90.31 | |
| cd05135 | 333 | RasGAP_RASAL Ras GTPase activating-like protein (R | 89.98 | |
| KOG1117 | 1186 | consensus Rho- and Arf-GTPase activating protein A | 87.61 | |
| cd01228 | 96 | PH_BCR-related BCR (breakpoint cluster region)-rel | 86.08 | |
| KOG0248 | 936 | consensus Cytoplasmic protein Max-1, contains PH, | 85.67 | |
| cd05128 | 315 | RasGAP_GAP1_like The GAP1 family of Ras GTPase-act | 85.62 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 85.37 | |
| PF10662 | 143 | PduV-EutP: Ethanolamine utilisation - propanediol | 81.82 |
| >KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=668.34 Aligned_cols=481 Identities=28% Similarity=0.410 Sum_probs=395.2
Q ss_pred cHHHHHHhcCCCCeEEEEEecCCCCCchhchHHHHHHHhcCCCCCceeeecCCCCCCCcchhHHHHHHHHHcCCC-CCCC
Q 004370 2 DDAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEGDSKALAAVRALLLNQG-PPKT 80 (758)
Q Consensus 2 ~~~mV~~YI~~~ntIILaVvpAn~~vDlans~aLklArevDP~G~RTIGVlTK~Dlmd~gt~~~~~~~~iL~nk~-pl~~ 80 (758)
.++||+.||++|+||||||+|||+ |++||+||++||+|||+|.||||||||+|+||+||++. .+|.|+. |++
T Consensus 158 I~~mi~~yi~~~~~iILav~~an~--d~ats~alkiarevDp~g~RTigvitK~DlmdkGt~~~----~~L~g~~~~l~- 230 (657)
T KOG0446|consen 158 IKSMIEEYIEKPNRIILAVTPANS--DIATSPALVVAREVDPGGSRTLEVITKFDFMDKGTNAV----TRLVGRPITLK- 230 (657)
T ss_pred HHHHHHHhccccchhhhhccchhh--hhhcCHHHHHHHhhCCCccchhHHhhhHHhhhcCCcce----eeecCCccccc-
Confidence 468999999999999999999996 99999999999999999999999999999999999974 4799998 888
Q ss_pred CCCCEEEEEcCCcccccccccCcccCCCHHHHHHHHHHHHhhcC-CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004370 81 SDIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETLKRLL-SGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSG 159 (758)
Q Consensus 81 ~~lGy~~V~nRs~~~~~~Q~d~i~~~~s~~~a~~~E~~FF~s~~-~~~~~~r~G~~~L~~~Ls~~L~~hI~~~LP~l~~~ 159 (758)
+||++|+||+ |+| |+.++++.+|+.+|+.||.+|| |++...++|+++|+++|+.+|..||+++||.|+..
T Consensus 231 --~g~v~vvnR~------q~d-i~~~k~~~~al~~e~~~f~~~p~y~~~~~~~g~p~La~~L~~~l~~hi~~~lP~l~~~ 301 (657)
T KOG0446|consen 231 --VGYVGVVNRS------QSI-IDFKKSILEALNDEVPSFESVPSYPILLTISGVPYLALLLPGYLQSHIRDQLPELKTK 301 (657)
T ss_pred --cceeeeeccc------hhh-hhhhhhHHHHHHhhhhhhhccccccccccccCcchHHHHHHHHHHHHHHhcCcHHHHH
Confidence 8999999999 777 9999999999999999999999 78778889999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCcchHHHHHhcchhhhhccCCC
Q 004370 160 LQGKSQIVQDELLKLGDQILENTEGTKALALQLCREFEDKFLQHITGGE--------GNGWKVVASFEGNFPNRMKQLPL 231 (758)
Q Consensus 160 I~~~l~~~e~eL~~LG~~~~~~~e~~~~~ll~li~~F~~~f~~~I~G~~--------~gGarI~~if~e~F~~~i~~lp~ 231 (758)
|+.++.+.++||.+||. +++.......++.++++|+..|...+.|.. +||+||+++||+.|+..+.++++
T Consensus 302 i~~~~~~~~~el~~~g~--~~~~~~~~~~ll~~i~~~~~~~~~~v~g~~~~~~~~elsggari~~~F~~~f~~~i~~i~~ 379 (657)
T KOG0446|consen 302 INKLLEKYQDELNRIGA--VDVDLANSAALLAIIREDPRGLRTGVIGKLDLVPTKALSGGARINYPFHGGFPGVIKKLPP 379 (657)
T ss_pred HHHHHHHHHHHHHHhcc--cCCccchhhHHHHHHHHHHHHHHHhhcccccccchhcccchhhhhhhhhhccchhhhcCCc
Confidence 99999999999999997 222222344578899999999999888862 58999999999999999999999
Q ss_pred CcccChhhHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcchHHHH
Q 004370 232 DRHFDMKNVKRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPGLGRYPPFKREV 311 (758)
Q Consensus 232 ~~~~~~~~Vr~~I~~~~G~~~~lf~P~~afe~Lik~qi~~~~~Pa~~cvd~V~~~L~~iv~~~~~~t~~l~rfP~L~~~i 311 (758)
++.+...+|++++.+++|+++++|.|+.+||.+|+.||+.+++|+++||+.||++|.+++.+|...+ .|.|||.|+.++
T Consensus 380 ~~~~~~~~i~~~i~~~~G~~~~lf~p~~afe~lvk~~i~~l~~p~l~~v~~v~~el~~~~~~~~~~~-~l~rfp~l~~~~ 458 (657)
T KOG0446|consen 380 DRKLLGQNIEKLVSEASGIRPSLFVPESSFESLVKGQIQSLRDPSLKCVEEVHRELVRIVADSIRAT-ELKRFPVLYSEL 458 (657)
T ss_pred chhhhHHHHHHHHHhccCCCccccCChHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhH-HHHHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999997633 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh--hHHHHH-HHHhhHHHHHhhhhhhhhhHHHhhhhccCCCCCCCCC
Q 004370 312 VEIASAALDRFKSDAKKMVVALVDMERVFVPPQH--FIRLVQ-RRQRREEEQKYRSSKKAADAEQSILNRATSPQTGGPE 388 (758)
Q Consensus 312 ~~iv~~~L~~~~~~a~~~v~~Lid~E~~yi~tnh--F~~~~q-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 388 (758)
.+++.++++++.++++++|..+|+||.+||||+| |+.... +.+. ..++.
T Consensus 459 ~~~~~~~~~~~~~~t~~~v~~~i~~e~~yinT~h~df~~~~~~al~~-----------------------~~~~~----- 510 (657)
T KOG0446|consen 459 VEIASSLIAEGLDETKKAVKNLIDLEQSYLNTDHPDFRSLTDSALSS-----------------------VTSPS----- 510 (657)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcChhhhhhHHHHHHH-----------------------hhccc-----
Confidence 9999999999999999999999999999999999 887652 2100 00000
Q ss_pred CCCCcccccCCCCCCccccccCCCcccCCCCCccccchhhcccCCCCCcccceeeeecCCcccccccchhhhhccceeec
Q 004370 389 SGGSLKSMKDKSSPQDKDVQEGSTLKTAGPGGEITAGFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTL 468 (758)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~GwL~K~g~~~~~WkkRWFVL~~~sg~L~YyK~~~ek~~kG~I~L 468 (758)
. .+ ..||. +. ..
T Consensus 511 ---------------------------------~------------------------~~--~~~~~-~~--------~~ 522 (657)
T KOG0446|consen 511 ---------------------------------I------------------------AA--MKLIS-AQ--------LL 522 (657)
T ss_pred ---------------------------------c------------------------cc--ccccc-cc--------cc
Confidence 0 00 11111 00 00
Q ss_pred CccccccccccccccCchhhhhcccCCCceEEEEeccCcchhhhhhhhhhhhhccChHHHHHHHHhhHHHHhhcCCcccc
Q 004370 469 EECYIEEVVEDEDAKSSKDKKKQAEKGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLNKLRVVIQARGGDVRR 548 (758)
Q Consensus 469 ~~~~v~~~~~~~~~~s~k~~~~np~~~~~~~F~I~t~~~~k~v~k~~r~~~L~AeS~eE~~~Wv~aiRa~i~~~~~~~~~ 548 (758)
..+... ...+++.++.-... + -..+.
T Consensus 523 ~~~~~~---------------------------------~~~~~~~~~~~~~~-------------~--~~~~~------ 548 (657)
T KOG0446|consen 523 KEELGE---------------------------------CNSALKAIKNAVGS-------------I--RLDPS------ 548 (657)
T ss_pred cccccc---------------------------------ccchhhhhcchhhh-------------h--hhccc------
Confidence 000000 00011111100000 0 00000
Q ss_pred CCCCCCccCCCCCCCCcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHhhhhhccH
Q 004370 549 DSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLNSLNANVPKAVVLCQVEKAKEDMLNQLYSSISAQST 628 (758)
Q Consensus 549 ~~~~~~~~~~~~~slDpq~~~~~~~~~~~~~i~~~V~sY~~iV~k~i~d~VPKai~h~~V~~~k~~Ll~~LY~~~~~~~~ 628 (758)
.+ .-..++++..+ .+.++++|++++.+|++||+++|+|+|||+|||||||.+|+.|+..||..+.. ..
T Consensus 549 ---~~-----~~~~~~~~~~~---~~~~~~~i~~~~~sY~~iv~~~i~d~vpk~i~~~lv~~~k~~l~~~l~~~L~~-~~ 616 (657)
T KOG0446|consen 549 ---DI-----VLSRALVLKKR---ECKETEEISSCPESYLNIVSDKLVDTVPKALNHELLNEFKDDLPNELDQRLYA-GD 616 (657)
T ss_pred ---ch-----hhhhhhhcchh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ch
Confidence 00 00011111222 35679999999999999999999999999999999999999888887777766 36
Q ss_pred HHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Q 004370 629 ERIGELLQEDKNAKSRRELCQKQSTLLSKLIRQLG 663 (758)
Q Consensus 629 ~~~~~Ll~E~~~~~~rR~~~~~~~~~l~~~~~~l~ 663 (758)
++++.||+|+|.+++||+.|++|+++|++|.+.++
T Consensus 617 ~~~~~ll~E~~~i~~~R~~~~~~l~~L~~a~~ii~ 651 (657)
T KOG0446|consen 617 EQLESLLKEDPRIKRRRELQQKRLLALQKALSILA 651 (657)
T ss_pred hHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999877664
|
|
| >PF01031 Dynamin_M: Dynamin central region; InterPro: IPR000375 Dynamin is a microtubule-associated force-producing protein of 100 Kd which is involved in the production of microtubule bundles | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >smart00302 GED Dynamin GTPase effector domain | Back alignment and domain information |
|---|
| >smart00053 DYNc Dynamin, GTPase | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0447 consensus Dynamin-like GTP binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >COG0699 Predicted GTPases (dynamin-related) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A | Back alignment and domain information |
|---|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton] | Back alignment and domain information |
|---|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02866 phospholipase D | Back alignment and domain information |
|---|
| >KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN00188 enhanced disease resistance protein (EDR2); Provisional | Back alignment and domain information |
|---|
| >cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15406 PH_6: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
| >cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15404 PH_4: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras | Back alignment and domain information |
|---|
| >KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1 | Back alignment and domain information |
|---|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 758 | ||||
| 3snh_A | 743 | Crystal Structure Of Nucleotide-Free Human Dynamin1 | 9e-15 | ||
| 3zvr_A | 772 | Crystal Structure Of Dynamin Length = 772 | 3e-14 | ||
| 3t34_A | 360 | Arabidopsis Thaliana Dynamin-Related Protein 1a (At | 2e-06 | ||
| 1jwy_B | 315 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 6e-05 | ||
| 3zys_B | 662 | Human Dynamin 1 Deltaprd Polymer Stabilized With Gm | 6e-05 | ||
| 3szr_A | 608 | Crystal Structure Of Modified Nucleotide-Free Human | 6e-05 | ||
| 3l43_A | 319 | Crystal Structure Of The Dynamin 3 Gtpase Domain Bo | 1e-04 |
| >pdb|3SNH|A Chain A, Crystal Structure Of Nucleotide-Free Human Dynamin1 Length = 743 | Back alignment and structure |
|
| >pdb|3ZVR|A Chain A, Crystal Structure Of Dynamin Length = 772 | Back alignment and structure |
| >pdb|3T34|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission State Length = 360 | Back alignment and structure |
| >pdb|1JWY|B Chain B, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 315 | Back alignment and structure |
| >pdb|3ZYS|B Chain B, Human Dynamin 1 Deltaprd Polymer Stabilized With Gmppcp Length = 662 | Back alignment and structure |
| >pdb|3SZR|A Chain A, Crystal Structure Of Modified Nucleotide-Free Human Mxa Length = 608 | Back alignment and structure |
| >pdb|3L43|A Chain A, Crystal Structure Of The Dynamin 3 Gtpase Domain Bound With Gdp Length = 319 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772 | Back alignment and structure |
|---|
Score = 259 bits (663), Expect = 8e-76
Identities = 118/664 (17%), Positives = 246/664 (37%), Gaps = 96/664 (14%)
Query: 5 MISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEGDSKA 64
M+ ++V + + ++L + PA D+++ AL+IAKE D RT+G+I+K+D + + A
Sbjct: 179 MLMQFVTKENCLILAVSPANS--DLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDA 236
Query: 65 LAAVRALLLNQGPPKTSDIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETLK-RL 123
R +L N+ P ++ V+ +S + AA AE +
Sbjct: 237 ----RDVLENKLLP--LRRGYIGVVNRS-------QKDIDGKKDITAALAAERKFFLSHP 283
Query: 124 LSGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGLQGKSQIVQDELLKLGDQILENTE 183
+++G L + Q+ N + +P L + LQ + ++ E+ + + ++
Sbjct: 284 SYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPA 343
Query: 184 GTKALALQLCREFEDKFLQHITGGEGN--------GWKVVASFEGNFPNRMKQLPLDRHF 235
LQ+ ++F F + I G G ++ F FP + ++ D
Sbjct: 344 RKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKE 403
Query: 236 DMKNVKRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAA 295
+ + + + L +P+ + +K ++ KEPS CVD V L +
Sbjct: 404 LRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIR--- 460
Query: 296 NATPGLGRYPPFKREVVEIASAALDRFKSDAKKMVVALVDMERVFVPPQH--FIRLVQRR 353
+ L +YP + E+ I + + + K+ V+ L+D+E ++ H FI +
Sbjct: 461 KCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQ 520
Query: 354 QRREEEQKYRSSKKAADAEQSILNRATSPQTGGPESGGSLKSMKDKSSPQDKDVQEGSTL 413
QR + K ++S + G + ++ MK S
Sbjct: 521 QRSNQMNKKKTSGNQDEIL---------VIRKGWLTINNIGIMKGGSKE----------- 560
Query: 414 KTAGPGGEITAGFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTLEECYI 473
WFVL + L + K EE+ + +++++ +
Sbjct: 561 --------------------------YWFVLTAEN--LSWYKDDEEKEKKYMLSVDNLKL 592
Query: 474 EEVVEDEDAKSSKDKKKQAEKGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLN 533
+V + + K +F + YK + A + E + K +L
Sbjct: 593 RDVEKGF----------MSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLR 642
Query: 534 KLRVVIQARGGDVRRDSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLN 593
+ + ++ +GS M E ++ + V Y+ V
Sbjct: 643 AGVYPERVGDKE-------KASETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNK 695
Query: 594 SLNANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTERIGELLQEDKNAKSRRELCQKQST 653
++ +PK ++ + KE + ++L +++ S L++E RR+ +
Sbjct: 696 TVRDLMPKTIMHLMINNTKEFIFSELLANL--YSCGDQNTLMEESAEQAQRRDEMLRMYH 753
Query: 654 LLSK 657
L +
Sbjct: 754 ALKE 757
|
| >3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608 | Back alignment and structure |
|---|
| >3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608 | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118 | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Length = 127 | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117 | Back alignment and structure |
|---|
| >3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A* Length = 360 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129 | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129 | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109 | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120 | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113 | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126 | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109 | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115 | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122 | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108 | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117 | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123 | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126 | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112 | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103 | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148 | Back alignment and structure |
|---|
| >2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A Length = 353 | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 115 | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228 | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130 | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
| >1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B* Length = 315 | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94 | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 130 | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Length = 164 | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* Length = 169 | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149 | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 150 | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 126 | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107 | Back alignment and structure |
|---|
| >3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125 | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* Length = 386 | Back alignment and structure |
|---|
| >2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A* Length = 299 | Back alignment and structure |
|---|
| >3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} Length = 256 | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112 | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Length = 125 | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 | Back alignment and structure |
|---|
| >2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137 | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Length = 129 | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Length = 385 | Back alignment and structure |
|---|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 Length = 402 | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Length = 264 | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466 | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 117 | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| 3zvr_A | 772 | Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito | 100.0 | |
| 3szr_A | 608 | Interferon-induced GTP-binding protein MX1; interf | 100.0 | |
| 3ljb_A | 271 | Interferon-induced GTP-binding protein MX1; four-h | 99.97 | |
| 1dyn_A | 125 | Dynamin; signal transduction protein; 2.20A {Homo | 99.93 | |
| 3t34_A | 360 | Dynamin-related protein 1A, linker, dynamin-relat | 99.9 | |
| 2x2e_A | 353 | Dynamin-1; nitration, hydrolase, membrane fission, | 99.89 | |
| 1wi1_A | 126 | Calcium-dependent activator protein for secretion, | 99.75 | |
| 1v88_A | 130 | Oxysterol binding protein-related protein 8; vesic | 99.74 | |
| 1x1f_A | 149 | Signal-transducing adaptor protein 1; docking prot | 99.73 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 99.72 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 99.72 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 99.72 | |
| 4a6h_A | 120 | Phosphatidylinositol 4,5-bisphosphate-binding Pro | 99.71 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 99.71 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 99.71 | |
| 2dhk_A | 119 | TBC1 domain family member 2; PH domain, paris-1, s | 99.71 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.71 | |
| 2coc_A | 112 | FYVE, rhogef and PH domain containing protein 3; s | 99.71 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 99.7 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 99.69 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 99.69 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 99.68 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 99.68 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 99.68 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 99.67 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 99.67 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 99.67 | |
| 1v5p_A | 126 | Pleckstrin homology domain-containing, family A; T | 99.67 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 99.66 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 99.66 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 99.66 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 99.66 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 99.66 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 99.66 | |
| 1btk_A | 169 | Bruton'S tyrosine kinase; transferase, PH domain, | 99.65 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 99.64 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 99.64 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 99.64 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 99.64 | |
| 2p0d_A | 129 | RHO GTPase-activating protein 9; protein-phosphoin | 99.63 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 99.63 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 99.62 | |
| 2rlo_A | 128 | Centaurin-gamma 1; split PH domain, alternative sp | 99.62 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 99.62 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 99.6 | |
| 2lul_A | 164 | Tyrosine-protein kinase TEC; structural genomics, | 99.6 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 99.59 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 99.59 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 99.58 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 99.57 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 99.57 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 99.56 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 99.54 | |
| 3a8p_A | 263 | T-lymphoma invasion and metastasis-inducing protei | 99.52 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 99.51 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 99.51 | |
| 2dtc_A | 126 | RAL guanine nucleotide exchange factor ralgps1A; P | 99.5 | |
| 1qqg_A | 264 | IRS-1, insulin receptor substrate 1; beta-sandwhic | 99.5 | |
| 2aka_B | 299 | Dynamin-1; fusion protein, GTPase domain, myosin, | 99.49 | |
| 3tca_A | 291 | Amyloid beta A4 precursor protein-binding family 1 | 99.48 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 99.47 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 99.47 | |
| 1jwy_B | 315 | Dynamin A GTPase domain; dynamin, GTPase, GDP, myo | 99.45 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 99.44 | |
| 2fjl_A | 150 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.44 | |
| 3pp2_A | 124 | RHO GTPase-activating protein 27; PH domain, GTPas | 99.43 | |
| 2ys3_A | 137 | UNC-112-related protein 2; PH domain, kindlin-3, s | 99.35 | |
| 2rov_A | 117 | RHO-associated protein kinase 2; ATP-binding, coil | 99.35 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.24 | |
| 2d9w_A | 127 | Docking protein 2; PH domain, structural genomics, | 99.12 | |
| 3a8n_A | 279 | TIAM-1, T-lymphoma invasion and metastasis-inducin | 99.12 | |
| 3hk0_A | 256 | Growth factor receptor-bound protein 10; GRB10, RA | 99.02 | |
| 4f7h_A | 173 | Fermitin family homolog 2; beta-barrel, membrane b | 98.99 | |
| 4gmv_A | 281 | RAS-associated and pleckstrin homology domains-CO | 98.98 | |
| 4bbk_A | 165 | Kindlin-1, fermitin family homolog 1; PH domain, c | 98.87 | |
| 1w1g_A | 151 | HPDK1, 3-phosphoinositide dependent protein kinase | 98.86 | |
| 2coa_A | 125 | Protein kinase C, D2 type; protein kinase D2, PH d | 98.36 | |
| 2d9z_A | 129 | Protein kinase C, NU type; PH domain, structural g | 98.22 | |
| 1v5m_A | 136 | SH2 and PH domain-containing adapter protein APS; | 97.67 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 97.66 | |
| 1v61_A | 132 | RAC/CDC42 guanine nucleotide exchange factor (GEF) | 97.4 | |
| 3ml4_A | 224 | Protein DOK-7; tyrosine phosphorylation, adapter p | 97.2 | |
| 1zc3_B | 113 | Exocyst complex protein EXO84; exocytosis, small G | 96.94 | |
| 1mai_A | 131 | Phospholipase C delta-1; pleckstrin, inositol tris | 96.88 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 96.75 | |
| 1dbh_A | 354 | Protein (human SOS 1); guanine nucleotide exchange | 96.16 | |
| 2pz1_A | 466 | RHO guanine nucleotide exchange factor 4; helical | 96.15 | |
| 3ky9_A | 587 | Proto-oncogene VAV; calponin homology domain, DBL | 96.12 | |
| 2lg1_A | 185 | A-kinase anchor protein 13; metal binding protein; | 96.08 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 96.06 | |
| 2dfk_A | 402 | Collybistin II; DH domain, PH domain, cell cycle; | 96.02 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 95.94 | |
| 1txd_A | 385 | RHO guanine nucleotide exchange factor 12; helical | 95.57 | |
| 3p6a_A | 377 | RHO guanine nucleotide exchange factor 1; regulati | 95.52 | |
| 2j69_A | 695 | Bacterial dynamin-like protein; FZO, FZL, GTPase, | 95.4 | |
| 3odw_A | 536 | RHO guanine nucleotide exchange factor 1; regulati | 95.34 | |
| 1xcg_A | 368 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 95.33 | |
| 3t06_A | 418 | PDZ-rhogef, RHO guanine nucleotide exchange factor | 95.19 | |
| 2z0q_A | 346 | XPLN, RHO guanine nucleotide exchange factor 3; DH | 95.18 | |
| 1kz7_A | 353 | Guanine nucleotide exchange factor DBS; guanine nu | 95.06 | |
| 1nty_A | 311 | Triple functional domain protein; DBL, pleckstrin, | 94.79 | |
| 3qwm_A | 140 | Iqsec1, IQ motif and SEC7 domain-containing protei | 94.68 | |
| 3ksy_A | 1049 | SOS-1, SON of sevenless homolog 1; RAS, RAS activa | 94.0 | |
| 2rgn_B | 354 | RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p | 92.91 | |
| 1foe_A | 377 | T-lymphoma invasion and metastasis inducing protei | 89.63 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 81.9 |
| >3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-99 Score=892.04 Aligned_cols=563 Identities=22% Similarity=0.355 Sum_probs=473.5
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCCCchhchHHHHHHHhcCCCCCceeeecCCCCCCCcchhHHHHHHHHHcCCC-CCCCC
Q 004370 3 DAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEGDSKALAAVRALLLNQG-PPKTS 81 (758)
Q Consensus 3 ~~mV~~YI~~~ntIILaVvpAn~~vDlans~aLklArevDP~G~RTIGVlTK~Dlmd~gt~~~~~~~~iL~nk~-pl~~~ 81 (758)
.+|+..|+.++..|||+|++|+. ++.+++.+.+++++++.|.+||+||||+|++++++.. .+++.++. +++
T Consensus 177 ~~lv~~yi~~~aDlIL~VVDAs~--~~~~~d~l~ll~~L~~~g~pvIlVlNKiDlv~~~~~~----~~il~~~~~~l~-- 248 (772)
T 3zvr_A 177 RDMLMQFVTKENCLILAVSPANS--DLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDA----RDVLENKLLPLR-- 248 (772)
T ss_dssp HHHHHHHHTSTTEEEEEEEETTS--CSSSCHHHHHHHHHCTTCSSEEEEEECTTSSCTTCCS----HHHHTTCSSCCS--
T ss_pred HHHHHHHHhcCCcEEEEEEcCCC--CcchhHHHHHHHHHHhcCCCEEEEEeCcccCCcchhh----HHHHHHHhhhhh--
Confidence 46899999999999999999997 9999999999999999999999999999999987754 34777766 776
Q ss_pred CCCEEEEEcCCcccccccccCcccCCCHHHHHHHHHHHHhhcC-CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004370 82 DIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETLKRLL-SGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGL 160 (758)
Q Consensus 82 ~lGy~~V~nRs~~~~~~Q~d~i~~~~s~~~a~~~E~~FF~s~~-~~~~~~r~G~~~L~~~Ls~~L~~hI~~~LP~l~~~I 160 (758)
+||+.|+++| +.+ ..+-..+.++...|++||..+| |....+++|+..|++.|++.|..||+++||.|+.+|
T Consensus 249 -lg~~~VV~iS------A~~-G~GvdeL~eaI~~e~~ffpe~P~yd~ltDr~g~~~LaEiLrEkL~~hi~~ELP~l~~~I 320 (772)
T 3zvr_A 249 -RGYIGVVNRS------QKD-IDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKL 320 (772)
T ss_dssp -SCEEECCCCC------CEE-SSSSEEHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccCCceEEec------ccc-cccchhHHHHHHHHHHhccCCcchhhhhhcccHHHHHHHHHHHHHHHHHhhCccHHHHH
Confidence 7999999999 444 4566789999999999999998 666678999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCcchHHHHHhcchhhhhccCCCC
Q 004370 161 QGKSQIVQDELLKLGDQILENTEGTKALALQLCREFEDKFLQHITGGE--------GNGWKVVASFEGNFPNRMKQLPLD 232 (758)
Q Consensus 161 ~~~l~~~e~eL~~LG~~~~~~~e~~~~~ll~li~~F~~~f~~~I~G~~--------~gGarI~~if~e~F~~~i~~lp~~ 232 (758)
+.++..++.||++||+++++++..+..+|+++|++|++.|.++|+|++ +||+||+++||+.|+..+.+++++
T Consensus 321 ~~~l~s~~vele~~~~~~~~~~~~~~~~ll~~~~~f~~~~~~~i~G~~~~~~~~el~ggari~~if~~~f~~~~~~~~~~ 400 (772)
T 3zvr_A 321 QSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFD 400 (772)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSSCSHHHHHHHHHHHHHHHHHHHTC---------CCHHHHHHHHHHTHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcccCCCCeeeehhHHHHhHHHHhcCCCc
Confidence 999999999999999998877666677899999999999999999998 589999999999999999999999
Q ss_pred cccChhhHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcchHHHHH
Q 004370 233 RHFDMKNVKRVVLEADGYQPYLISPEKGLRSLIKSVLEMAKEPSRLCVDEVHRVLVDIVSAAANATPGLGRYPPFKREVV 312 (758)
Q Consensus 233 ~~~~~~~Vr~~I~~~~G~~~~lf~P~~afe~Lik~qi~~~~~Pa~~cvd~V~~~L~~iv~~~~~~t~~l~rfP~L~~~i~ 312 (758)
+.++.++|+++|+|++|++|++|+|+.+|+.||++||++|++||++|||.|+++|.+++.+|. .+|.|||+|+++|.
T Consensus 401 ~~~~~~~I~~~i~n~~G~~~~lf~p~~~fe~LVk~QI~rl~ePsl~CVdlV~~eL~~iv~~~~---~~l~RfP~Lr~ei~ 477 (772)
T 3zvr_A 401 EKELRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKCS---EKLQQYPRLREEME 477 (772)
T ss_dssp HHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHG---GGGTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999984 68999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh--hHHHHHHHHhhHHHHHhhhhhhhhhHHHhhhhccCCCCCCCCCCC
Q 004370 313 EIASAALDRFKSDAKKMVVALVDMERVFVPPQH--FIRLVQRRQRREEEQKYRSSKKAADAEQSILNRATSPQTGGPESG 390 (758)
Q Consensus 313 ~iv~~~L~~~~~~a~~~v~~Lid~E~~yi~tnh--F~~~~q~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 390 (758)
+++.++|++++.+|+++|..|||||++|||||| |+++.++.++..+..+ + .
T Consensus 478 ~iv~~~Lre~~~~t~~~V~~LId~E~ayintnHpdf~~~~~~~~~~~~~~~-----~------------~---------- 530 (772)
T 3zvr_A 478 RIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQQRSNQMNK-----K------------K---------- 530 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCTTCCCC-----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhchHHHHHHHHHHhh-----c------------c----------
Confidence 999999999999999999999999999999999 9998776433322111 0 0
Q ss_pred CCcccccCCCCCCccccccCCCcc----cCCCCCccccchhhcc--cCCCCCcccceeeeecCCcccccccchhhhhccc
Q 004370 391 GSLKSMKDKSSPQDKDVQEGSTLK----TAGPGGEITAGFLLKK--SSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRG 464 (758)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~i~~GwL~K~--g~~~~~WkkRWFVL~~~sg~L~YyK~~~ek~~kG 464 (758)
..+|| | +++|||... |+++++-|.+||||+.++ |.|||+++++..++
T Consensus 531 -------------------~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 583 (772)
T 3zvr_A 531 -------------------TSGNQDEILV------IRKGWLTINNIGIMKGGSKEYWFVLTAEN--LSWYKDDEEKEKKY 583 (772)
T ss_dssp --------------------------CCE------EEEEEEEESSSCCC---CCEEEEEEESSE--EEEESSTTCCCEEE
T ss_pred -------------------cccCCccccc------eeeeeeeecccccccCCCccceeeccccc--cccccchhhhcccc
Confidence 12344 5 999999986 677899999999999987 99999999999999
Q ss_pred eeecCccccccccccccccCchhhhhcccCCCceEEEEeccCcchhhhhhhhhhhhhccChHHHHHHHHhh-HHHHhhcC
Q 004370 465 VVTLEECYIEEVVEDEDAKSSKDKKKQAEKGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLNKL-RVVIQARG 543 (758)
Q Consensus 465 ~I~L~~~~v~~~~~~~~~~s~k~~~~np~~~~~~~F~I~t~~~~k~v~k~~r~~~L~AeS~eE~~~Wv~ai-Ra~i~~~~ 543 (758)
+++|+++++++++.+++ + +.++|.|++++ .+||||+|++++|+|+|+++++.|++++ ||+|||++
T Consensus 584 ~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 649 (772)
T 3zvr_A 584 MLSVDNLKLRDVEKGFM--S-----------SKHIFALFNTE-QRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPER 649 (772)
T ss_dssp EEECTTEEEEEC--------------------CEEEEEEETT-SSCSBTTBSEEEEEESSHHHHHHHHHHHHHTTCCBC-
T ss_pred cccccccccchhhhccc--c-----------ccccccccCCc-cccccchhhhhhhhccccccchhhHHhhhhcccCCcc
Confidence 99999999999998863 3 56899999998 7899999999999999999999999998 99999965
Q ss_pred Cccc---cCCCCCCccCCCCCCCCcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH----HHH
Q 004370 544 GDVR---RDSIHPMRQSHSDGSLDTMARKPADPEEELRWMAQEVRGYVEAVLNSLNANVPKAVVLCQVEKAKE----DML 616 (758)
Q Consensus 544 ~~~~---~~~~~~~~~~~~~~slDpq~~~~~~~~~~~~~i~~~V~sY~~iV~k~i~d~VPKai~h~~V~~~k~----~Ll 616 (758)
+... .+++++ .......|||||++|| +++|++||+|||+||+|||+|+|||||||+|||++|+ +||
T Consensus 650 ~~~~~~~~~~~~~-~~~~~~~~~~~q~~~q------~e~~~~l~~sy~~iv~k~~~d~~pk~im~~~vn~~k~~~~~el~ 722 (772)
T 3zvr_A 650 VGDKEKASETEEN-GSDSFMHSMDPQLERQ------VETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELL 722 (772)
T ss_dssp ------------------------CHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTHH
T ss_pred ccccccccccCCc-cccccccCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4321 010111 2334566999999997 9999999999999999999999999999999999997 899
Q ss_pred HHHHhhhhhccHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 004370 617 NQLYSSISAQSTERIGELLQEDKNAKSRRELCQKQSTLLSKLIRQLGVH 665 (758)
Q Consensus 617 ~~LY~~~~~~~~~~~~~Ll~E~~~~~~rR~~~~~~~~~l~~~~~~l~~~ 665 (758)
.+||++++ +++||+|||++++||++|++||++|++|.++++-.
T Consensus 723 ~~ly~~~~------~~~lm~Es~~~~~~r~~~~~~~~~l~~a~~ii~~i 765 (772)
T 3zvr_A 723 ANLYSCGD------QNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDI 765 (772)
T ss_dssp HHHHHTCC------TTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhcccC------HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999985 88999999999999999999999999998887643
|
| >3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B | Back alignment and structure |
|---|
| >3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A | Back alignment and structure |
|---|
| >3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A* | Back alignment and structure |
|---|
| >2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
| >3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* | Back alignment and structure |
|---|
| >2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A* | Back alignment and structure |
|---|
| >3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B* | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} | Back alignment and structure |
|---|
| >2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
| >2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} | Back alignment and structure |
|---|
| >3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* | Back alignment and structure |
|---|
| >4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A | Back alignment and structure |
|---|
| >4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus} | Back alignment and structure |
|---|
| >1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A | Back alignment and structure |
|---|
| >2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus} | Back alignment and structure |
|---|
| >1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B* | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A | Back alignment and structure |
|---|
| >2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A | Back alignment and structure |
|---|
| >2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
| >2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A | Back alignment and structure |
|---|
| >1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A | Back alignment and structure |
|---|
| >3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A | Back alignment and structure |
|---|
| >2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A* | Back alignment and structure |
|---|
| >3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A | Back alignment and structure |
|---|
| >1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A* | Back alignment and structure |
|---|
| >3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens} | Back alignment and structure |
|---|
| >2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A | Back alignment and structure |
|---|
| >1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A | Back alignment and structure |
|---|
| >1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A | Back alignment and structure |
|---|
| >3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens} | Back alignment and structure |
|---|
| >3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A | Back alignment and structure |
|---|
| >2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 | Back alignment and structure |
|---|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 758 | ||||
| d1fgya_ | 127 | b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1 | 1e-16 | |
| d2i5fa1 | 104 | b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie | 3e-14 | |
| d1eaza_ | 103 | b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: | 3e-13 | |
| d1v89a_ | 118 | b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI | 5e-13 | |
| d1v5ua_ | 117 | b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M | 6e-13 | |
| d1x1ga1 | 116 | b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie | 8e-13 | |
| d1plsa_ | 113 | b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta | 1e-12 | |
| d1u5ea1 | 209 | b.55.1.1 (A:14-222) Src-associated adaptor protein | 3e-12 | |
| d1v88a_ | 130 | b.55.1.1 (A:) Oxysterol binding protein-related pr | 3e-12 | |
| d1faoa_ | 100 | b.55.1.1 (A:) Dual adaptor of phosphotyrosine and | 2e-10 | |
| d1btka_ | 169 | b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Hom | 3e-09 | |
| d1u5da1 | 106 | b.55.1.1 (A:108-213) Src kinase-associated phospho | 6e-09 | |
| d1unqa_ | 118 | b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H | 3e-08 | |
| d1droa_ | 122 | b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila | 5e-08 | |
| d1v5pa_ | 126 | b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: | 6e-08 | |
| d1u5fa1 | 111 | b.55.1.1 (A:109-219) Src-associated adaptor protei | 1e-07 | |
| d2coca1 | 99 | b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont | 2e-07 | |
| d2fjla1 | 101 | b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phosph | 6e-07 | |
| d2coda1 | 102 | b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo | 4e-06 | |
| d2dyna_ | 111 | b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId | 7e-06 | |
| d1upqa_ | 107 | b.55.1.1 (A:) Phosphoinositol 3-phosphate binding | 1e-05 | |
| d2coaa1 | 112 | b.55.1.1 (A:8-119) Protein kinase c, d2 type {Huma | 1e-05 | |
| d1wgqa_ | 109 | b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin | 1e-05 | |
| d1wi1a_ | 126 | b.55.1.1 (A:) Calcium-dependent activator protein | 2e-05 | |
| d1qqga1 | 103 | b.55.1.2 (A:12-114) Insulin receptor substrate 1, | 1e-04 | |
| d1maia_ | 119 | b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus | 2e-04 | |
| d2cofa1 | 95 | b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) | 2e-04 | |
| d1wjma_ | 123 | b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), | 3e-04 | |
| d2elba2 | 101 | b.55.1.1 (A:274-374) DCC-interacting protein 13-al | 4e-04 | |
| d1v61a_ | 132 | b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (M | 4e-04 | |
| d1btna_ | 106 | b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), | 7e-04 | |
| d1x1fa1 | 136 | b.55.1.1 (A:8-143) Signal-transducing adaptor prot | 8e-04 | |
| d2dfka2 | 162 | b.55.1.1 (A:240-401) Rho guanine nucleotide exchan | 0.004 |
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
class: All beta proteins fold: PH domain-like barrel superfamily: PH domain-like family: Pleckstrin-homology domain (PH domain) domain: Grp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 74.9 bits (183), Expect = 1e-16
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 425 GFLLKKSSKTNGWSKRWFVLNEKTGKLGYTKKQEERHFRGVVTLEECYIEEVVEDEDAKS 484
G+LLK + W +RWF+L L Y + ++ RG++ LE I EV++ K
Sbjct: 9 GWLLKLGGRVKTWKRRWFIL--TDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPR--KP 64
Query: 485 SKDKKKQAEKGPSLIFKITSKVPYKTVLKAHSALLLKAENMAEKFEWLNKLRVVIQARGG 544
+ + +I ++ + V H + A + EK EW+ ++ I
Sbjct: 65 NCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS---- 120
Query: 545 DVRRDSIHPM 554
RD + M
Sbjct: 121 ---RDPFYDM 127
|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117 | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116 | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 | Back information, alignment and structure |
|---|
| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Length = 130 | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 169 | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106 | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122 | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126 | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111 | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101 | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107 | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} Length = 112 | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109 | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119 | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Length = 123 | Back information, alignment and structure |
|---|
| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Length = 101 | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Length = 132 | Back information, alignment and structure |
|---|
| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106 | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 136 | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| d1jwyb_ | 306 | Dynamin G domain {Dictyostelium discoideum [TaxId: | 99.85 | |
| d2akab1 | 299 | Dynamin G domain {Rat (Rattus norvegicus) [TaxId: | 99.84 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 99.78 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 99.72 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 99.71 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 99.69 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 99.66 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 99.65 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 99.65 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 99.62 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 99.62 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 99.61 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.6 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 99.6 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 99.6 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 99.59 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 99.59 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 99.59 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 99.58 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 99.58 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 99.58 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 99.56 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 99.56 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 99.56 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 99.54 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 99.53 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 99.53 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 99.5 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 99.49 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 99.49 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 99.46 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 99.4 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 99.39 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 99.34 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 98.78 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 98.38 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 98.36 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 98.03 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 97.64 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 97.13 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 96.92 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 96.56 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 96.42 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 96.11 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 94.27 | |
| d2adza1 | 105 | Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1 | 82.81 | |
| d2zkmx3 | 131 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 82.03 |
| >d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: G proteins domain: Dynamin G domain species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.85 E-value=1.5e-21 Score=204.56 Aligned_cols=146 Identities=23% Similarity=0.396 Sum_probs=133.7
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCCCchhchHHHHHHHhcCCCCCceeeecCCCCCCCcchhHHHHHHHHHcCCC-CCCCC
Q 004370 3 DAMISKYVERSDAVLLVIIPATQTPDVSSYRALRIAKEHDADSTRTVGIISKMDQAEGDSKALAAVRALLLNQG-PPKTS 81 (758)
Q Consensus 3 ~~mV~~YI~~~ntIILaVvpAn~~vDlans~aLklArevDP~G~RTIGVlTK~Dlmd~gt~~~~~~~~iL~nk~-pl~~~ 81 (758)
++|+..||.++++|||+|++|+. |+.++.++.+++++||.|.|||||+||+|+.+++.+. ..++.|.. ++.
T Consensus 158 ~~~~~~yi~~~~~~il~v~~~~~--~~~~~~~~~~~~~~~~~~~r~i~Vitk~D~~~~~~~~----~~~l~~~~~~~~-- 229 (306)
T d1jwyb_ 158 RRMVMAYIKKQNAIIVAVTPANT--DLANSDALQLAKEVDPEGKRTIGVITKLDLMDKGTDA----MEVLTGRVIPLT-- 229 (306)
T ss_dssp HHHHHHHHHSTTEEEEEEEESSS--CSTTCSHHHHHHHHCSSCSSEEEEEECTTSSCSSCCC----HHHHTTSSSCCT--
T ss_pred HHHHHHHHhCCCceeEEeecccc--cccccHHHHHHHHhCcCCCeEEEEEeccccccchhHH----HHHHhCCccccc--
Confidence 57999999999999999999997 9999999999999999999999999999999988874 45888887 766
Q ss_pred CCCEEEEEcCCcccccccccCcccCCCHHHHHHHHHHHHhhcC-CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004370 82 DIPWVAVIGQSVAISSVTSSGAAADSSLEAAWRAEVETLKRLL-SGAPQNKLGRVALVDTIAGQIRNRMSLRVPKLLSGL 160 (758)
Q Consensus 82 ~lGy~~V~nRs~~~~~~Q~d~i~~~~s~~~a~~~E~~FF~s~~-~~~~~~r~G~~~L~~~Ls~~L~~hI~~~LP~l~~~I 160 (758)
+||++++|+. +.+ .....+++++++.|.+||.+++ |..+.+++|+.+|+.+|+++|.+||+++||.|+.+|
T Consensus 230 -~~~~~~~~~~------~~~-~~~~~~~~~~~~~E~~~f~~~~~~~~l~~r~Gi~~L~~~L~~~L~~~i~~~lP~i~~~i 301 (306)
T d1jwyb_ 230 -LGFIGVINRS------QED-IIAKKSIRESLKSEILYFKNHPIYKSIANRSGTAYLSKTLNKLLMFHIRDTLPDLKVKV 301 (306)
T ss_dssp -TCEEECCCCC------HHH-HSSSCCHHHHHHHHHHHHHTCTTGGGSGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCceeeecCc------hhh-ccccCCHHHHHHHHHHHHhCCchhcchHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 7999999998 334 5678999999999999999998 677789999999999999999999999999999999
Q ss_pred HHhH
Q 004370 161 QGKS 164 (758)
Q Consensus 161 ~~~l 164 (758)
+++|
T Consensus 302 ~~~L 305 (306)
T d1jwyb_ 302 SKML 305 (306)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9876
|
| >d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
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| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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