Citrus Sinensis ID: 004393

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750------

MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRVKCLSASKGYLWRKLT

cccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccEEccccccccHHHcccc

ccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEEHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHEEEccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccEEEccccccccccccHHHHcc

MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEakdslgddkELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAegggvmaaisnprrsakksttatissnshtQQKLKVqgkgykdkCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIydyvapcfpprYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDnliglgvdeSLAQVCsesgamdplmNSYVERMQATTKKWYLNILdadkvqppkrtedgklytpAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERerlaepapeiglePLCAMINNNLRCYDLAMELStstmealppnyaeqvNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNIlehqpdcppEVVERLVALRDGIPRKDAKEVLQECKEIYEnslvnghppkagfVFSRVKCLsaskgylwrklt

mmsedlgvEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAeakdslgddkELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSttatissnshtqqklkvqgkgykdKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELtierlrvdeEVITDFFreyisinkvenrVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYenslvnghppkAGFVFSRVkclsaskgylwrklt

MMSEDLGveakeaavrevakLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLaeeaaeaegggVMAAISNPRRsakksttatissnsHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQaaererlaepapeIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRVKCLSASKGYLWRKLT

**************VREVAKLLTLPDQLQFIGDMKADYIA***************************ALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNL*****************************LINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEIL**************************************************GYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLA*********************ATTKKWYLNILDADK*********GKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRVKCLSASKGYLWR***

************AAVREVAKLLTLPDQLQFIGD********************************SLALSEQMISQLRENFISI***************QIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFAL************LREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAE******************RSA**ST************KLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVD**********GAMDPLMNSYVERMQATTKKWYLNILDADK***P*RTEDGKLYTPAAVDLFRILGE**************YRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELS*********************KGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKE***********************VFSRVKCLS***GYLWRK**

*********AKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFAL*********VGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISN*****************************YKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRVKCLSASKGYLWRKLT

*MSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRVKCLS***********

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		756	2.2.26 [Sep-21-2011]
Q54BP6		783	Exocyst complex component	yes	no	0.956	0.923	0.243	3e-57
Q19262		796	Exocyst complex component	yes	no	0.892	0.847	0.219	3e-21
Q0V8C2		745	Exocyst complex component	yes	no	0.722	0.732	0.205	5e-17
Q62825		755	Exocyst complex component	yes	no	0.882	0.883	0.200	2e-16
O60645		756	Exocyst complex component	yes	no	0.716	0.716	0.212	4e-15
Q6KAR6		755	Exocyst complex component	yes	no	0.886	0.887	0.196	4e-15
Q9V8K2		738	Exocyst complex component	yes	no	0.724	0.742	0.205	3e-14
A2AV37		780	Exocyst complex component	yes	no	0.870	0.843	0.193	4e-14
P32844		805	Exocyst complex component	yes	no	0.584	0.549	0.196	4e-13
O74846		752	Exocyst complex component	yes	no	0.880	0.885	0.196	5e-13

>sp\|Q54BP6\|EXOC3_DICDI Exocyst complex component 3 OS=Dictyostelium discoideum GN=exoc3 PE=3 SV=1	Back alignment and function desciption

 Score =  223 bits (569), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 188/771 (24%), Positives = 364/771 (47%), Gaps = 48/771 (6%)

Query: 8   VEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQAQTGLESL 67
           + A+ AA++++ +  +  D L  + + K   I +++  ++Q+   V  ++E+++ GLE+L
Sbjct: 15  LSAQSAAIKKIEQNFSNIDSLASVTNHKISLIQQKKTIEAQIKNEVHSELEKSKKGLETL 74

Query: 68  ALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEGMMSISVE 127
             S   I+++ E+F      C E   LI ++  IK ++  R NL   LK+V+ +++I  +
Sbjct: 75  YKSYNRINRMDESFSDTVELCSETSNLIGHYQLIKKVNTVRVNLINILKEVDRLLTIPEK 134

Query: 128 AAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVDQIWETFE 187
           AAE +  L DD  L+  + +L  L+   + AL   ES+ EE+  ++E F  V ++   FE
Sbjct: 135 AAEIEQLLSDDLNLLEIHSKLRELERLHQKALKQFESNFEELEAIKEMFSSVPELSHRFE 194

Query: 188 KTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRS 247
             +W  +SN   +++  P  LV+  +++E +++ +Q+  E+ ++     ++++       
Sbjct: 195 NKIWNIVSNSIDIAQIKPAVLVKVAQIIEREKLHEQKQKEKKSQ---NSLISSEGIHDDD 251

Query: 248 AKKSTTATISSNS----------HTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELV 297
                T    +NS           +           +D+ Y++ R     RF ++L + +
Sbjct: 252 DDDDDTEVNLNNSNKQQNNENENSSSNNNNNYDINNEDEGYDRNRSNYGDRFLEVLIQSI 311

Query: 298 ---FE--------DLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQ 346
              FE        DL   L++   + +EL  + D V  C+PP Y++F   V+ Y  +F  
Sbjct: 312 SGKFEPMFLNSHNDLVQTLKDVNKMVDELFIVMDIVQECYPPSYDLFNFYVDQYHTKFYS 371

Query: 347 MLRLLSDR--------------ANELTNIEILKVTGWVVE-YQDNLIGLGVDESLAQVCS 391
           +    S+                  + +  IL +  WVV+ Y  +L  LG+ +    +  
Sbjct: 372 LFGSFSNLMESSHVNNNYQVVVTKNIPSAHILMLVEWVVKNYSRDLSRLGIQDISPPLL- 430

Query: 392 ESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQV 451
              ++DPL+  Y   ++   ++W  NI++ D    P+   DG+  + A + LF  +  Q+
Sbjct: 431 --DSLDPLIKIYKMHIKQLMREWCDNIINNDNQNKPEVV-DGQYCSLAPIQLFESVASQL 487

Query: 452 QIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEPAPEIGLEPLCAMINNNLRCYDLA 511
            I        ++  +   ++  ++ FQ      L E   EI LE + A +NNN +CYD  
Sbjct: 488 DIAAATKCQKLVVGVMEEVVSALMYFQVQSITLLQERNHEIKLENVIAYVNNNSKCYDHT 547

Query: 512 MELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKE 571
             +       L   +   ++F+   +GFL V+K A +   +VIF D  +++ + K Y  E
Sbjct: 548 QTIVDKVSNILDSEHMGYLDFDPVLEGFLNVSKVATQAISSVIFRD--LDECIHKFYTVE 605

Query: 572 WSDGQVTEYLTATFGDYFM-DVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYIREL 630
           W    + + +  TF DY   D++ +I E   +R     L+  I   +  L+  KN   E 
Sbjct: 606 WYQEDLMQPIINTFEDYVTNDIQKYILENYLKRLALLLLDTLIEQLLAQLIGGKNKFNEN 665

Query: 631 TIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPD 690
           T + L  D + + DFF++Y+ ++ V  +V+IL D +++ ++ S+D   + + +++    D
Sbjct: 666 TYKILSNDCDKLLDFFKKYLRLSVVTAKVQILEDFKQMITS-SIDMVPVYFRSVINFHKD 724

Query: 691 CPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRV 741
               VVE ++  R  I + +  EVL + K I E    +   P  G +FSR+
Sbjct: 725 INERVVELVLYQRTDISKSEITEVLGQIKTIVETVHTDPTNPPTG-IFSRM 774

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Dictyostelium discoideum (taxid: 44689)

>sp\|Q19262\|EXOC3_CAEEL Exocyst complex component 3 OS=Caenorhabditis elegans GN=sec-6 PE=3 SV=2	Back alignment and function description

>sp\|Q0V8C2\|EXOC3_BOVIN Exocyst complex component 3 OS=Bos taurus GN=EXOC3 PE=2 SV=1	Back alignment and function description

>sp\|Q62825\|EXOC3_RAT Exocyst complex component 3 OS=Rattus norvegicus GN=Exoc3 PE=1 SV=1	Back alignment and function description

>sp\|O60645\|EXOC3_HUMAN Exocyst complex component 3 OS=Homo sapiens GN=EXOC3 PE=1 SV=2	Back alignment and function description

>sp\|Q6KAR6\|EXOC3_MOUSE Exocyst complex component 3 OS=Mus musculus GN=Exoc3 PE=1 SV=2	Back alignment and function description

>sp\|Q9V8K2\|EXOC3_DROME Exocyst complex component 3 OS=Drosophila melanogaster GN=sec6 PE=2 SV=2	Back alignment and function description

>sp\|A2AV37\|EX3L1_DANRE Exocyst complex component 3-like protein OS=Danio rerio GN=exoc3l1 PE=2 SV=1	Back alignment and function description

>sp\|P32844\|SEC6_YEAST Exocyst complex component SEC6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC6 PE=1 SV=2	Back alignment and function description

>sp\|O74846\|SEC6_SCHPO Exocyst complex component sec6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec6 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
225429246		756	PREDICTED: exocyst complex component 3 [	1.0	1.0	0.866	0.0
224146468		758	predicted protein [Populus trichocarpa]	1.0	0.997	0.857	0.0
359486028		756	PREDICTED: exocyst complex component 3-l	1.0	1.0	0.862	0.0
356506130		756	PREDICTED: exocyst complex component 3-l	1.0	1.0	0.851	0.0
357469701		755	Exocyst complex subunit SEC6 [Medicago t	0.998	1.0	0.837	0.0
255572385		756	exocyst complex component sec6, putative	0.993	0.993	0.863	0.0
356496372		756	PREDICTED: exocyst complex component 3-l	1.0	1.0	0.845	0.0
449446355		756	PREDICTED: exocyst complex component 3-l	1.0	1.0	0.862	0.0
224135427		749	predicted protein [Populus trichocarpa]	0.988	0.997	0.829	0.0
18409922		752	protein SEC6 [Arabidopsis thaliana] gi\|1	0.994	1.0	0.833	0.0

>gi\|225429246\|ref\|XP_002264732.1\| PREDICTED: exocyst complex component 3 [Vitis vinifera] gi\|296088092\|emb\|CBI35451.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1350 bits (3495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/756 (86%), Positives = 711/756 (94%)

Query: 1   MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDSQLSTMVAEQIEQA 60
           M+ EDLG+EAKEAAVREVAKLL LP+ LQ I  +KADYI RQQAND+QLSTMVAEQ+EQA
Sbjct: 1   MIVEDLGIEAKEAAVREVAKLLPLPELLQSISSIKADYITRQQANDAQLSTMVAEQVEQA 60

Query: 61  QTGLESLALSEQMISQLRENFISIERYCQECQTLIENHDQIKLLSNARNNLSTTLKDVEG 120
           Q GLES++ S++ I+QLRENF+SIER CQECQ LIENHDQIKLLSN RNNL+TTLKDVEG
Sbjct: 61  QAGLESISSSQKTINQLRENFLSIERLCQECQNLIENHDQIKLLSNVRNNLNTTLKDVEG 120

Query: 121 MMSISVEAAEAKDSLGDDKELINTYERLTALDGKRRFALAAAESHKEEVGRLREYFEDVD 180
           MMSISVEA+EA+DSL DDKELINTYERLTALDGKRRFALAAA SHKEEVGRLREYFEDVD
Sbjct: 121 MMSISVEASEARDSLSDDKELINTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVD 180

Query: 181 QIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAA 240
           + WETFEKTLWG+ISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGG MA+
Sbjct: 181 RTWETFEKTLWGHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGTMAS 240

Query: 241 ISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFED 300
           I+NPRR+AKKSTTAT SS + TQQKLK+QGK YKDKCYEQIRK VE+RFNKLLTELVFED
Sbjct: 241 IANPRRTAKKSTTATASSRNLTQQKLKIQGKDYKDKCYEQIRKTVEQRFNKLLTELVFED 300

Query: 301 LKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTN 360
           LKAALEEAR IGEEL DIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRAN+LTN
Sbjct: 301 LKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANQLTN 360

Query: 361 IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILD 420
           IEILKVTGWVVEYQDNLIGLGVD+SLAQVCSESGAMDPLMNSYVERMQATTKKWYLNIL+
Sbjct: 361 IEILKVTGWVVEYQDNLIGLGVDDSLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILE 420

Query: 421 ADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAA 480
           ADKVQPPK+TEDGKLYTPAAVDLFRILGEQVQIVRENSTD+MLYRIALA+IQVMIDFQAA
Sbjct: 421 ADKVQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRENSTDVMLYRIALAVIQVMIDFQAA 480

Query: 481 ERERLAEPAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFL 540
           E+ RL EPA EIGLE LCAMINNNLRCYDLA+ELS+ST+EALP NYAEQVNFED CKGFL
Sbjct: 481 EKRRLEEPASEIGLESLCAMINNNLRCYDLALELSSSTLEALPQNYAEQVNFEDTCKGFL 540

Query: 541 EVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERS 600
           EV KEAV  T++VIFEDPGV++LLVKLYQKEW +GQVTEYL ATFGDYFMDVKM+IEERS
Sbjct: 541 EVAKEAVHQTVSVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFMDVKMYIEERS 600

Query: 601 FRRFVEACLEETIVIYIDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVR 660
           FRRFVEACLEET+V+Y+DHLLTQ+NYI+E TIER+R+DEEVI DFFREYIS++KVENRVR
Sbjct: 601 FRRFVEACLEETVVVYVDHLLTQRNYIKEETIERMRLDEEVILDFFREYISVSKVENRVR 660

Query: 661 ILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKE 720
           IL+DLRELASA S+D F LIYTNILEHQPDCP EVVE+LV LR+GIPRKDAKEV+QECKE
Sbjct: 661 ILSDLRELASAESLDTFTLIYTNILEHQPDCPSEVVEKLVGLREGIPRKDAKEVVQECKE 720

Query: 721 IYENSLVNGHPPKAGFVFSRVKCLSASKGYLWRKLT 756
           IYENSLV G+PPKAGFVF +VKCL+ASKG LWRKLT
Sbjct: 721 IYENSLVGGNPPKAGFVFPKVKCLTASKGSLWRKLT 756

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224146468\|ref\|XP_002326016.1\| predicted protein [Populus trichocarpa] gi\|222862891\|gb\|EEF00398.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359486028\|ref\|XP_002268285.2\| PREDICTED: exocyst complex component 3-like [Vitis vinifera] gi\|298204486\|emb\|CBI23761.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356506130\|ref\|XP_003521840.1\| PREDICTED: exocyst complex component 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|357469701\|ref\|XP_003605135.1\| Exocyst complex subunit SEC6 [Medicago truncatula] gi\|355506190\|gb\|AES87332.1\| Exocyst complex subunit SEC6 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|255572385\|ref\|XP_002527131.1\| exocyst complex component sec6, putative [Ricinus communis] gi\|223533554\|gb\|EEF35294.1\| exocyst complex component sec6, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356496372\|ref\|XP_003517042.1\| PREDICTED: exocyst complex component 3-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|449446355\|ref\|XP_004140937.1\| PREDICTED: exocyst complex component 3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224135427\|ref\|XP_002327215.1\| predicted protein [Populus trichocarpa] gi\|222835585\|gb\|EEE74020.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|18409922\|ref\|NP_565026.1\| protein SEC6 [Arabidopsis thaliana] gi\|15028129\|gb\|AAK76688.1\| unknown protein [Arabidopsis thaliana] gi\|22136818\|gb\|AAM91753.1\| unknown protein [Arabidopsis thaliana] gi\|332197115\|gb\|AEE35236.1\| protein SEC6 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
DICTYBASE\|DDB_G0293520		783	exoc3 "exocyst complex subunit	0.608	0.587	0.255	2.1e-61
ASPGD\|ASPL0000042482		759	AN1988 [Emericella nidulans (t	0.568	0.566	0.225	4.4e-23
WB\|WBGene00017284		796	sec-6 [Caenorhabditis elegans	0.555	0.527	0.213	5.3e-20
UNIPROTKB\|G4N9X0		755	MGG_03235 "Uncharacterized pro	0.538	0.539	0.235	1.8e-18
FB\|FBgn0034367		738	sec6 "sec6" [Drosophila melano	0.265	0.272	0.225	2.8e-18
SGD\|S000001330		805	SEC6 "Essential 88kDa subunit	0.297	0.279	0.189	2.3e-17
UNIPROTKB\|E1BUJ3		751	EXOC3L1 "Uncharacterized prote	0.607	0.611	0.208	2.6e-17
UNIPROTKB\|F1NHD9		745	EXOC3 "Uncharacterized protein	0.267	0.271	0.189	1.1e-16
UNIPROTKB\|Q0V8C2		745	EXOC3 "Exocyst complex compone	0.269	0.273	0.237	5.9e-15
UNIPROTKB\|F1PX56		745	EXOC3 "Uncharacterized protein	0.485	0.492	0.203	2.5e-14

DICTYBASE\|DDB_G0293520 exoc3 "exocyst complex subunit 3" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

 Score = 436 (158.5 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
 Identities = 124/485 (25%), Positives = 228/485 (47%)

Query:   273 YKDKCYEQIRKAVERRFNKLLTELVFEDLKAALEEARTIGEELADIYDYVAPCFPPRYEI 332
             Y D+  E + +++  +F  +       DL   L++   + +EL  + D V  C+PP Y++
Sbjct:   299 YGDRFLEVLIQSISGKFEPMFLNS-HNDLVQTLKDVNKMVDELFIVMDIVQECYPPSYDL 357

Query:   333 FQLMVNLYTERFIQML----RLL-SDRANE-----LT-NI---EILKVTGWVVE-YQDNL 377
             F   V+ Y  +F  +      L+ S   N      +T NI    IL +  WVV+ Y  +L
Sbjct:   358 FNFYVDQYHTKFYSLFGSFSNLMESSHVNNNYQVVVTKNIPSAHILMLVEWVVKNYSRDL 417

Query:   378 IGLGVDESLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYT 437
               LG+ + ++    +S  +DPL+  Y   ++   ++W  NI++ D    P+   DG+  +
Sbjct:   418 SRLGIQD-ISPPLLDS--LDPLIKIYKMHIKQLMREWCDNIINNDNQNKPE-VVDGQYCS 473

Query:   438 PAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQXXXXXXXXXXXXXIGLEPL 497
              A + LF  +  Q+ I        ++  +   ++  ++ FQ             I LE +
Sbjct:   474 LAPIQLFESVASQLDIAAATKCQKLVVGVMEEVVSALMYFQVQSITLLQERNHEIKLENV 533

Query:   498 CAMINNNLRCYDLAMELSTSTMEALPPNYAEQVNFEDACKGFLEVTKEAVRHTLNVIFED 557
              A +NNN +CYD    +       L   +   ++F+   +GFL V+K A +   +VIF D
Sbjct:   534 IAYVNNNSKCYDHTQTIVDKVSNILDSEHMGYLDFDPVLEGFLNVSKVATQAISSVIFRD 593

Query:   558 PGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFM-DVKMFIEERSFRRFVEACLEETIVIY 616
               +++ + K Y  EW    + + +  TF DY   D++ +I E   +R     L+  I   
Sbjct:   594 --LDECIHKFYTVEWYQEDLMQPIINTFEDYVTNDIQKYILENYLKRLALLLLDTLIEQL 651

Query:   617 IDHLLTQKNYIRELTIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDA 676
             +  L+  KN   E T + L  D + + DFF++Y+ ++ V  +V+IL D +++ ++ S+D 
Sbjct:   652 LAQLIGGKNKFNENTYKILSNDCDKLLDFFKKYLRLSVVTAKVQILEDFKQMITS-SIDM 710

Query:   677 FALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGF 736
               + + +++    D    VVE ++  R  I + +  EVL + K I E    +   P  G 
Sbjct:   711 VPVYFRSVINFHKDINERVVELVLYQRTDISKSEITEVLGQIKTIVETVHTDPTNPPTG- 769

Query:   737 VFSRV 741
             +FSR+
Sbjct:   770 IFSRM 774

GO:0006887 "exocytosis" evidence=IEA

GO:0000145 "exocyst" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

ASPGD\|ASPL0000042482 AN1988 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

WB\|WBGene00017284 sec-6 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N9X0 MGG_03235 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

FB\|FBgn0034367 sec6 "sec6" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

SGD\|S000001330 SEC6 "Essential 88kDa subunit of the exocyst complex" [Saccharomyces cerevisiae (taxid:4932)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BUJ3 EXOC3L1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NHD9 EXOC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0V8C2 EXOC3 "Exocyst complex component 3" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PX56 EXOC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		756
pfam06046		557	pfam06046, Sec6, Exocyst complex component Sec6	1e-125
COG5173		742	COG5173, SEC6, Exocyst complex subunit SEC6 [Intra	5e-32

>gnl\|CDD\|218871 pfam06046, Sec6, Exocyst complex component Sec6	Back alignment and domain information

 Score =  383 bits (987), Expect = e-125
 Identities = 159/587 (27%), Positives = 268/587 (45%), Gaps = 51/587 (8%)

Query: 176 FEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGG 235
           F  +D + E F+K LW  I N  +L +E P+ LVRALR+VE +E  D++        +  
Sbjct: 1   FSKLDGLIEKFDKLLWEIIRNLIELVREGPELLVRALRIVEREEKEDEKAEALQEATKDE 60

Query: 236 GVMAAISNPRRSAKKSTTATISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTE 295
               A     R                        +GYKDK  + + ++VE RF +    
Sbjct: 61  NNDDAGRFRGRP-----------------------RGYKDKFLDALEESVEERFEECRER 97

Query: 296 LV-FEDLKAALEEARTIGEELADIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDR 354
            +   DL   LE  R + E+L  + D +AP FPP Y IF+  VN+Y       L+ L+D 
Sbjct: 98  FLGDPDLVQVLENLRWVFEDLIVVKDLLAPLFPPHYNIFKTYVNIYHNALHDFLQELAD- 156

Query: 355 ANELTNIEILKVTGWVVEYQDNLIGLGVD---ESLAQVCSESGAMDPLMNSYVERMQATT 411
             EL   +IL +  W   Y   +  LG+      L  +  +    + L + Y+  +    
Sbjct: 157 -PELEAEDILAILSWDNTYYSFMGKLGLAPDKSDLEPLLLDEL-KEELEDDYLSLIVNKV 214

Query: 412 KKWYLNILDADKV-----QPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRI 466
           ++W  N+L+ +K      QPP   EDG  +TP  VD+F+++ EQ+ +  E+    +L  +
Sbjct: 215 REWMDNLLETEKKEFVAEQPPDIDEDGYYHTPLPVDVFQMIEEQLDVAAESLQAKILVGV 274

Query: 467 ALAIIQVMIDFQAAERERLAEPA-----PEIGLEPLCAMINNNLRCYDLAMELSTSTMEA 521
              + + +   Q A  E L E           +E L A+ N+ L+C D A  L    +  
Sbjct: 275 LEELSKFLRSRQDAWIELLEEELRKYMSVPGLVEYLIALANDQLKCADYASSLLQKYLPK 334

Query: 522 LPPNYAE--QVNFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTE 579
           +   Y E     FE+   GF++++KE +   L +IF D  ++  L KL+ K+W  G++ E
Sbjct: 335 VSSKYEERITEEFEELLDGFVDLSKECISLLLELIFND--LQPALSKLFTKKWYTGELME 392

Query: 580 YLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQK-----NYIRELTIER 634
            +  T  DY  D + ++    F+  +E  L+E +V Y+  L  ++        R+   E+
Sbjct: 393 QIVETIEDYLNDYQEYLHPPLFQELLEELLDELVVEYLRALRNKRLVFKGAEERKQFAEK 452

Query: 635 LRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPE 694
           ++ D E + DFF++      + ++ R+L  L +L      DA  L    +L   PD   +
Sbjct: 453 MKRDAEQLYDFFQKLGDAAYLLSKFRVLEKLLDLLKLEDPDALILEVETLLSSYPDISED 512

Query: 695 VVERLVALRDGIPRKDAKEVLQECKEIYENSLVNGHPPKAGFVFSRV 741
            VE ++  R  + +   K +L   +EI ++   +  PP+   +FSRV
Sbjct: 513 HVEAVLKARGDLDKSMVKALLSRLREIVKSYERDVEPPRT--IFSRV 557

Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner. Length = 557

>gnl\|CDD\|227500 COG5173, SEC6, Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		756
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	100.0
KOG2286		667	consensus Exocyst complex subunit SEC6 [Intracellu	100.0
COG5173		742	SEC6 Exocyst complex subunit SEC6 [Intracellular t	100.0
KOG2180		793	consensus Late Golgi protein sorting complex, subu	100.0
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	99.97
KOG0412		773	consensus Golgi transport complex COD1 protein [In	99.79
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	99.29
PF07393		710	Sec10: Exocyst complex component Sec10; InterPro:	98.79
KOG2176		800	consensus Exocyst complex, subunit SEC15 [Intracel	98.7
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	98.64
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	97.96
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	97.9
PF05664		677	DUF810: Protein of unknown function (DUF810); Inte	97.81
PF10474		234	DUF2451: Protein of unknown function C-terminus (D	96.96
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	96.87
PF10475		291	DUF2450: Protein of unknown function N-terminal do	96.58
KOG2218		737	consensus ER to golgi transport protein/RAD50-inte	96.07
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	96.07
KOG3758		655	consensus Uncharacterized conserved protein [Funct	96.06
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	94.03
smart00762		324	Cog4 COG4 transport protein. This region is found	92.13
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	91.88
KOG2286		667	consensus Exocyst complex subunit SEC6 [Intracellu	90.77
PF08318		331	COG4: COG4 transport protein; InterPro: IPR013167	90.58
PF01843		105	DIL: DIL domain; InterPro: IPR018444 Dilute encode	90.54
PF15469		182	Sec5: Exocyst complex component Sec5	89.83
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	86.96
PF09763		701	Sec3_C: Exocyst complex component Sec3; InterPro:	84.52

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

Probab=100.00  E-value=6.8e-90  Score=797.03  Aligned_cols=541  Identities=29%  Similarity=0.502  Sum_probs=287.8

Q ss_pred             hhcHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHHHHhhhhhhhHHHHHHHHHHccCcccccccCcccccccccccc
Q 004393          176 FEDVDQIWETFEKTLWGYISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGVMAAISNPRRSAKKSTTAT  255 (756)
Q Consensus       176 F~~v~~l~~~f~~~l~~~~~~~l~~~~~~p~~lv~~~rIie~EE~~D~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  255 (756)
                      |++|+.+++.|+++||.++++++++|+.+|++||+|+||||+||++|+++....                    ......
T Consensus         1 F~~v~~l~~~~~~~l~~i~~~~l~~~~~~~~~lv~~~~Iie~EE~~D~~~~~~~--------------------~~~~~~   60 (566)
T PF06046_consen    1 FEDVDELSDEFEKQLWSIVRNSLELVRSDPELLVRAVRIIEREERADERAAARQ--------------------EAQSFQ   60 (566)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhHHHHHHh--------------------hhhccc
Confidence            899999999999999999999999999999999999999999999999987520                    000001


Q ss_pred             cccCcchhhccccCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhhccccCCCcchHHH
Q 004393          256 ISSNSHTQQKLKVQGKGYKDKCYEQIRKAVERRFNKLLTELVFED-LKAALEEARTIGEELADIYDYVAPCFPPRYEIFQ  334 (756)
Q Consensus       256 ~~~~~~~~~~~~~~pr~~k~~~~~~l~~sv~~~~~~~~~~~~~~d-~~~~L~~~~~~~~dL~~v~~~~~~~fP~~~~I~~  334 (756)
                      .+.+.+....++++||+||++|+++|+.+|++||+.+...+.++. +...|+.++|+++||..|++.++|||||+|+||+
T Consensus        61 ~~~f~~~~~~~~~rpr~~r~~~~~~l~~sv~~~~~~~~~~~~~~~~l~~~l~~l~~~~~DL~~v~~~~~~cfPp~~~I~~  140 (566)
T PF06046_consen   61 AARFRSINQGPPGRPRNWRQKFFEALRESVEERFEQAEEREENKSWLARHLEALRWVLEDLQVVKDDVVPCFPPEYDIFN  140 (566)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhCcccCCCCChHHH
Confidence            111222234678999999999999999999999996655443322 4456788789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCChhhHHHHhchhHHHHHHHhcCCCC-cccccccCCCCchhhHHHHHHHHHHHHHHH
Q 004393          335 LMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVD-ESLAQVCSESGAMDPLMNSYVERMQATTKK  413 (756)
Q Consensus       335 ~~~~~yh~~l~~~L~~l~~~~~~l~~~~ll~ll~wv~~Y~~~l~~l~i~-~~~l~~ll~~~~~~~L~~~Y~~~~~~~l~e  413 (756)
                      +|+.+||.+++++|+++.  .+++++++++.||+|+..|++.|+..++. .+.++|+++++.++.|+++|++.++.+|++
T Consensus       141 ~y~~~YH~~l~~~l~~l~--~~~l~~~~ll~ll~W~~~Y~~~m~~~~l~~~~~l~plL~~~~~~~L~~~Yl~~~~~~~~e  218 (566)
T PF06046_consen  141 TYVSMYHNALSDHLQELI--SPDLEANDLLSLLSWVNTYPSIMGHPDLAIKEQLGPLLPDEKLEELEDDYLSRIQKKMKE  218 (566)
T ss_dssp             -----------------------------------------------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc--cCCCCHHHHhhheechhhChHhhcCCcccchhhccCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997  67999999999999977799988876555 778899999999999999999999999999


Q ss_pred             HHHHHHhhcc-----cCCCCCCCCCccccCchhhHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 004393          414 WYLNILDADK-----VQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAEP  488 (756)
Q Consensus       414 wl~~~l~~er-----~~~Pe~d~dg~~~t~~~~dlfqmi~qql~~a~~~~~~~~~~~v~~~~~~~l~~f~~~~~~~l~~~  488 (756)
                      |+.|+++.|+     +.+|+.|.+|+|+|++|+|+||||+||+++|.....+.++..++..+...|..|+..+.+.++++
T Consensus       219 W~~n~l~~E~~~w~~~~~Pe~~~dg~y~t~~~~difqmi~qql~va~~~l~~~v~~~v~~~~~~~l~~~~~~~~~~~~~~  298 (566)
T PF06046_consen  219 WMDNILEQEVKDWSEEKEPEEDEDGYYHTPLPVDIFQMINQQLDVASESLQGKVLQRVLEELANFLKSYQDAWQEFKEEH  298 (566)
T ss_dssp             HHHHHHHHHHHHHHC-S--EE-TTS-EE-HHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCCcCCCCCeecCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999996     67999999999999999999999999999997777765555566666666666666665554322


Q ss_pred             -----------CCCCCchhhHHhccchHHhHHHHHHHHHHhhhhCCcchhhhc--chHHHhhhHHHHHHHHHHHHHHHHh
Q 004393          489 -----------APEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQV--NFEDACKGFLEVTKEAVRHTLNVIF  555 (756)
Q Consensus       489 -----------~~~~~~~~lia~~N~~~~c~e~~~~l~~~~~~~v~~~~~~~i--~~~~~~~~f~~l~~~~~~~L~~~i~  555 (756)
                                 .++.+.+|+||++|||.+|.++++++..++.+.++++|.+.+  +++.+.++|.++++.|++.|++.+|
T Consensus       299 ~~~~~~~~~~~~~~~~~eyliA~~N~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~if  378 (566)
T PF06046_consen  299 FKDRSSVKPKENPPGYLEYLIAVANNCLRCRDYVESLEQKFEEKVSQKYMERISSDLEELMDGFDDLAKECCQYLLEEIF  378 (566)
T ss_dssp             HHHHHHHHHCC--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhcccccccccchHHHHHHHhccHHHHHHHHHHHHHhcccccchHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                       236779999999999999999999999999998888887653  6789999999999999999999999


Q ss_pred             cCCCchHHHhhhccccccCcchhHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccccc-----cHH
Q 004393          556 EDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFVEACLEETIVIYIDHLLTQKNYI-----REL  630 (756)
Q Consensus       556 ~d~~l~p~~~~lft~~W~~~~~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~l~~~~v~~Yi~~l~~~k~~~-----~~~  630 (756)
                      .|  ++|+|+++||++||++++|++||.|++||++||+.||++++|+.|++++++++|.+|+++|+++|..+     ++.
T Consensus       379 ~D--l~p~~~~Lft~~W~~~~~~~~I~~Ti~dY~~d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~  456 (566)
T PF06046_consen  379 ND--LKPHFKKLFTKKWYSGEAVDTICATIEDYLQDFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKE  456 (566)
T ss_dssp             HC--THHHHCTTTSGGGCTS-HHHHHHHHHHHHHHHHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCC
T ss_pred             HH--hHHHHHHhCcCcCcCcchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHH
Confidence            99  99999999999999998899999999999999997799999999999999999999999999987543     578


Q ss_pred             HHHHHHhHHHHHHHHHHcccchhhhhhhhHhHHHHHHhhccCChhhHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCChHh
Q 004393          631 TIERLRVDEEVITDFFREYISINKVENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKD  710 (756)
Q Consensus       631 ~a~~i~~D~~~l~~~F~~l~s~~~v~~~~~~l~~l~~ll~~~~~~~~~~~~~~l~~~~pD~s~~~v~~iL~~R~Dl~r~~  710 (756)
                      +|++|++|++.+++||.++++.+.+.+.+.+|+.|++++.++|++++.++|.+|++.|||++.+||++||.+|||++|++
T Consensus       457 ~a~~i~~D~~~l~~~F~~~~~~~~~~~~~~~l~~l~~ll~~~d~~~i~l~~~~l~~~ypD~~~~~v~alL~~R~D~~r~~  536 (566)
T PF06046_consen  457 AAERIRRDAEQLKSFFSKLGSKSEVKSSFDVLEDLLELLRLEDPEMIKLEVSSLLQKYPDISEEHVEALLALRGDLSRSE  536 (566)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-HS-CCCHHHHHHHHHCC-TT--SHHHHHHHCT-TT--HHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH
Confidence            99999999999999999999877788999999999999988999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCccccccc
Q 004393          711 AKEVLQECKEIYENSLVNGHPPKAGFVFSRV  741 (756)
Q Consensus       711 ~~~~l~~~~~~~~~~l~~~~~~~~~~ifs~i  741 (756)
                      ++++++.+++...+....++||+|+ |||+|
T Consensus       537 ~~~il~~~~~~~~~~~~~~~~~~~~-ifs~i  566 (566)
T PF06046_consen  537 VKEILEILREIIKSYPANAEPPPPT-IFSRI  566 (566)
T ss_dssp             HHHHHHHHHHHHHHHHCCCH------GGGG-
T ss_pred             HHHHHHHHHHHhhccccccCCCCCC-CCCCC
Confidence            9999999999988765444445555 99986

Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []	Back alignment and domain information

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>KOG2218 consensus ER to golgi transport protein/RAD50-interacting protein 1 [Intracellular trafficking, secretion, and vesicular transport; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>KOG3758 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>smart00762 Cog4 COG4 transport protein	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08318 COG4: COG4 transport protein; InterPro: IPR013167 This region is found in yeast oligomeric golgi complex component 4 which is involved in ER to Golgi and intra Golgi transport []	Back alignment and domain information

>PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		756
2fji_1		399	Crystal Structure Of The C-Terminal Domain Of The E		2e-06

>pdb|2FJI|1 Chain 1, Crystal Structure Of The C-Terminal Domain Of The Exocyst Subunit Sec6p Length = 399

Back alignment and structure

Iteration: 1

Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/366 (17%), Positives = 148/366 (40%), Gaps = 47/366 (12%) Query: 397 DPLMNSYVERMQATTKKWYLNILDAD------KVQPPKRTEDGKLYTPAAVDLFRILGEQ 450 + L Y+ + +W N+ A+ + PP DG L+ F++ +Q Sbjct: 10 ETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQ 69 Query: 451 VQI------------VRENSTDIMLYRIALAIIQVMIDFQXXXXXXXXXXXXXIGLEP-- 496 V++ V E +D++ R I ++ + + + P Sbjct: 70 VEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPED 129 Query: 497 ---------LCAMINNNLRCYDLAMELSTSTMEALPPNYAEQV--NFEDACKGFLEVTKE 545 L A+ N+ ++ D A+ +S+ + + Y +Q+ + E GF EV + Sbjct: 130 ECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQC 189 Query: 546 AVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFV 605 + + ++F+D + + +++ K W G + + T +Y +D+K + F F+ Sbjct: 190 SSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFI 247 Query: 606 EACLEETIVIYI-----DHLLTQKNYIRELTIERLRVDEEVITDFFREYISINK-----V 655 + + ETI+ ++ +H KN +E ++ D E+ F + + N+ + Sbjct: 248 DNVIGETIIKFLTALSFEHSFKNKN---NKFLEAMKRDFEIFYQLFVKVLDGNESKDTLI 304 Query: 656 ENRVRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVL 715 ++ +L S +D+ I+ LE D +++ ++ R + + K+++ Sbjct: 305 TQNFTVMEFFMDL-SCEPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIV 363 Query: 716 QECKEI 721 Q+ E+ Sbjct: 364 QQATEM 369

PyMOL of 2fji

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		756
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	2e-63
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	2e-04

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 399	Back alignment and structure

 Score =  216 bits (551), Expect = 2e-63
 Identities = 65/394 (16%), Positives = 154/394 (39%), Gaps = 46/394 (11%)

Query: 397 DPLMNSYVERMQATTKKWYLNILDADK------VQPPKRTEDGKLYTPAAVDLFRILGEQ 450
           + L   Y+  +     +W  N+  A+         PP    DG L+       F++  +Q
Sbjct: 10  ETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQ 69

Query: 451 VQIVRENSTDIMLYRIALAIIQVMIDFQAAERERLAE----------------------- 487
           V++    +   +L  +      ++   Q     +++E                       
Sbjct: 70  VEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPED 129

Query: 488 PAPEIGLEPLCAMINNNLRCYDLAMELSTSTMEALPPNYAEQV--NFEDACKGFLEVTKE 545
             P   +E L A+ N+ ++  D A+ +S+   + +   Y +Q+  + E    GF EV + 
Sbjct: 130 ECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQC 189

Query: 546 AVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFIEERSFRRFV 605
           +    + ++F+D  + +   +++ K W  G   + +  T  +Y +D+K  +    F  F+
Sbjct: 190 SSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFI 247

Query: 606 EACLEETIVIYIDHLLTQKNYIREL--TIERLRVDEEVITDFFREYISINK-----VENR 658
           +  + ETI+ ++  L  + ++  +    +E ++ D E+    F + +  N+     +   
Sbjct: 248 DNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTLITQN 307

Query: 659 VRILTDLRELASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQEC 718
             ++    +L+    +D+   I+   LE   D   +++  ++  R  +   + K+++Q+ 
Sbjct: 308 FTVMEFFMDLSCE-PIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQA 366

Query: 719 KEIYE----NSLVNGHPPKAGFVFSRVKCLSASK 748
            E+      N   NG   +      R       +
Sbjct: 367 TEMLHEYRRNMEANGVDREPTL-MRRFVLEFEKQ 399

PyMOL of 2fji

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		756
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	100.0
3hr0_A		263	COG4; conserved oligomeric golgi complex, intracel	99.22
3ns4_A		271	Vacuolar protein sorting-associated protein 53; GA	99.04
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	98.73
3fhn_A		706	Protein transport protein TIP20; TIP20P, vesicle t	98.04
3mmi_A		386	Myosin-4; globular tail, dilute domain, motor prot	94.62
2f6h_X		419	Myosin-2, type V myosin; mysoin V, cargo binding,	90.45
3vkg_A		3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	81.37

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

Probab=100.00  E-value=1.1e-56  Score=494.33  Aligned_cols=356  Identities=18%  Similarity=0.346  Sum_probs=321.1

Q ss_pred             cccCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc------ccCCCCCCCCCccccCchhhHHHHHHHHHHHHHhhCchh
Q 004393          388 QVCSESGAMDPLMNSYVERMQATTKKWYLNILDAD------KVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRENSTDI  461 (756)
Q Consensus       388 ~~ll~~~~~~~L~~~Y~~~~~~~l~ewl~~~l~~e------r~~~Pe~d~dg~~~t~~~~dlfqmi~qql~~a~~~~~~~  461 (756)
                      +|+|+++.++.|+++|++.++++|++|+.|+++.|      |+.+|+.|.+|+|+|++|+|+|+||++|+++|..++.+.
T Consensus         1 ~~ll~~~~~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~t~~~~dvfqml~eql~~a~~~~~~~   80 (399)
T 2fji_1            1 GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAK   80 (399)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEECHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCeeCCchHHHHHHHHHHHHHHHhCCCcc
Confidence            57888899999999999999999999999999999      778999999999999999999999999999999999985


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcC-----------------------CCCCCCchhhHHhccchHHhHHHHHHHHHHh
Q 004393          462 MLYRIALAIIQVMIDFQAAERERLAE-----------------------PAPEIGLEPLCAMINNNLRCYDLAMELSTST  518 (756)
Q Consensus       462 ~~~~v~~~~~~~l~~f~~~~~~~l~~-----------------------~~~~~~~~~lia~~N~~~~c~e~~~~l~~~~  518 (756)
                      ...+|+..|+..|..|+..|++.+.+                       ..++.+++|+||++|||..|.+++.++..++
T Consensus        81 l~~~v~~~~~~~L~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~liA~~Nn~~~~~e~~~~l~~~~  160 (399)
T 2fji_1           81 ILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKY  160 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCCTTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccccccHHHhhhhhhccHHHHHHHHHHHHHHH
Confidence            66599999999999999998876511                       1235568999999999999999999999999


Q ss_pred             hhhCCcchhhhc--chHHHhhhHHHHHHHHHHHHHHHHhcCCCchHHHhhhccccccCcchhHHHHHhHHHHHHHHHHHh
Q 004393          519 MEALPPNYAEQV--NFEDACKGFLEVTKEAVRHTLNVIFEDPGVEQLLVKLYQKEWSDGQVTEYLTATFGDYFMDVKMFI  596 (756)
Q Consensus       519 ~~~v~~~~~~~i--~~~~~~~~f~~l~~~~~~~L~~~i~~d~~l~p~~~~lft~~W~~~~~v~~i~~ti~dy~~d~~~~L  596 (756)
                      .+.+++.|.+++  +++.+.++|.++++.|++.|++.||.|  |+|+|+++||++||+++.|++||.|++||++||+.||
T Consensus       161 ~~~~~~~~~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~d--l~p~~~~lft~~W~~~~~v~~i~~ti~dy~~d~~~~L  238 (399)
T 2fji_1          161 GKLVSKVYEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQM  238 (399)
T ss_dssp             HTTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT--THHHHTTTTSGGGTTCCHHHHHHHHHHHHHHHHGGGS
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence            999999997766  688999999999999999999999999  9999999999999999899999999999999998899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcccccc---HHHHHHHHhHHHHHHHHHHcccchhh-----hhhhhHhHHHHHHh
Q 004393          597 EERSFRRFVEACLEETIVIYIDHLLTQKNYIR---ELTIERLRVDEEVITDFFREYISINK-----VENRVRILTDLREL  668 (756)
Q Consensus       597 ~~~~~~~l~~~l~~~~v~~Yi~~l~~~k~~~~---~~~a~~i~~D~~~l~~~F~~l~s~~~-----v~~~~~~l~~l~~l  668 (756)
                      +|++|+.|+++++++++.+|+++|++ +..++   +.++++|.+|++.+++||.++++.+.     +.+.+.+|+.|++ 
T Consensus       239 ~~~~~~~l~~~~~~~~v~~Yl~~l~~-~~~~~~~~~~~~~~l~~D~~~l~~~f~~~~~~~~~~~~~v~~~~~~l~~l~~-  316 (399)
T 2fji_1          239 NSVLFVNFIDNVIGETIIKFLTALSF-EHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTLITQNFTVMEFFMD-  316 (399)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGG-CCCCCCGGGHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHH-
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHH-
Confidence            99999999999999999999999998 55455   89999999999999999999998665     7889999999999 


Q ss_pred             hccCChhhHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCChHhHHHHHHHHHHHHHhcc--c--CCCCCCCcccccccccc
Q 004393          669 ASANSVDAFALIYTNILEHQPDCPPEVVERLVALRDGIPRKDAKEVLQECKEIYENSL--V--NGHPPKAGFVFSRVKCL  744 (756)
Q Consensus       669 l~~~~~~~~~~~~~~l~~~~pD~s~~~v~~iL~~R~Dl~r~~~~~~l~~~~~~~~~~l--~--~~~~~~~~~ifs~i~~~  744 (756)
                      |++++++++.++|.+++..|||++++||++||.+|||++|++++++++.|+++..+.-  .  .+.+ .|+|||||+.+.
T Consensus       317 L~~d~~~~i~~~~~~l~~~ypD~~~~~V~aiL~~R~D~~~~~~k~ll~~~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~~  395 (399)
T 2fji_1          317 LSCEPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHEYRRNMEANGVD-REPTLMRRFVLE  395 (399)
T ss_dssp             HHHSCGGGHHHHHHHHHTTCTTCCSHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCGGGGCCCC
T ss_pred             hcCCcHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhHHHHhhccccC-CCCchhhhhhhh
Confidence            9975549999999999999999999999999999999999999999999987765431  1  1223 344599999997


Q ss_pred             cccc
Q 004393          745 SASK  748 (756)
Q Consensus       745 ~~~~  748 (756)
                      ++-|
T Consensus       396 ~~~~  399 (399)
T 2fji_1          396 FEKQ  399 (399)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            7643

PyMOL of 2fji

>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}	Back alignment and structure

>3ns4_A Vacuolar protein sorting-associated protein 53; GARP complex component, helical bundle, membrane tethering C membrane traffic, VPS51; HET: MSE; 2.90A {Saccharomyces cerevisiae}	Back alignment and structure

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}	Back alignment and structure

>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae}	Back alignment and structure

>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae}	Back alignment and structure

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00