Citrus Sinensis ID: 004401

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750------
MGSGLSSLFPCFKPVNHTNRTQPDQTQQQPDLIFASSEPLDETLGHSFCYVRSSNRFLSPTPSDRFVSPSQSLRFSPSRAGPGPRGPQPETGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLSGPLGALSGPLDQNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAFHDKKRPWVVPVLNFVSRKDNNNNSNNNVEDDDADVAKNERENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVSVNENDNTQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETRRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKFGLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPCTAPNRGAASPRSKESWDGSS
cccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccHHcccccccccccccccccccccEEEEEEEccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHcccccccEEcccccccccccccccccccccccccHHHHHHHccccccccccEEEEEcEEEEEEcccccEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccc
cccccEEEEEcccccccccccccccccccccEEEEccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHcccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcHcccccccEEEEEEccccccccccccccccccccccccHHcccccccEEEEcccccccEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHHcccccccccEEEcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEccEEEEEEcccccEEEEEEcccccccccccccccHHHHHHHHHHccccccHccccccHHcccccccccEEEEEEccccccccHHHHHHHHHHHccccccEEEEccEEEEEEEEEccccHHcccHHHcHHHHHHccccccccccEEEEccEEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHHcHcccccccHHHHHHHHHHHHHHHHcccccc
mgsglsslfpcfkpvnhtnrtqpdqtqqqpdlifassepldetlghsfcyvrssnrflsptpsdrfvspsqslrfspsragpgprgpqpetgfraisgasvsantatprtvlqldniyddateptcaggygvKSSIVNVsgfestssfsamplqpvprggaydasergpfflsgplgalsgpldqnaasepgggrvhfsaplgglyvkrkkkrgilgmsgirkafhdkkrpwvvpVLNFVsrkdnnnnsnnnvedddadvaknerendNNVQWALGKAGEDRVHVVVSEEHGWLFVgiydgfngpdapeflMGNLYRAVYNELKGLfwdveepdetvnNVTVSVnendntqeieikndpsvliseneledkerakrvtfesekTETRRRRLWEFLAeddqedgldlsgserfafsvddaisvnkagsAVSRRWLLLSKLKQGLltkhkessqgrkslfpwkfgleekekvEVEENRVEERIVqsgkkrrvgpvdHELVLRALSRALDLTELAYLDMTEKVldtnpelaLMGSCLLVVLMRDEDVYVMNVGDSRAIVAqyqpeavrgsgwmkgqvdtgssmdgiveESSVtlgerggkvaadeaPAQAMKLTAVQLSTDHSTSIEEEIIRIknehpddsqcivndrvKGRLKVTRAfgagflkkpklnDTLLEMFRNeyigtapyisctpslchlrlcprdqflvlssdglyqyLTNQEVVSLVESFmekfpdgdpctapnrgaasprskeswdgss
MGSGLSSLFPCFKPVNHTNRTQPDQTQQQPDLIFASSEPLDETLGHSFCYVRSSNRFLSPTPSDRFVspsqslrfspsragpgprgpqPETGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLSGPLGALSGPLDQNAASepgggrvhfsaplgglyvkrkkkrgiLGMSgirkafhdkkrpwVVPVLNFvsrkdnnnnsnnnvedddadvAKNERENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVsvnendntqeieikndpsvliseneledkerakrvtfesektetrrrRLWEflaeddqedgldLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGlltkhkessqgrkslfpwkfgleekekveveenrveerivqsgkkrrvgpvdhELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVaqyqpeavrgsgwMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIriknehpddsqcivndrVKGRLKVTrafgagflkkpklndTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPdgdpctapnrgaasprskeswdgss
MGSGLSSLFPCFKPVNHTNRtqpdqtqqqpdLIFASSEPLDETLGHSFCYVRSSNRFLSPTPSDRFVSPSQSLrfspsragpgprgpqpETGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFlsgplgalsgplDQNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAFHDKKRPWVVPVLNFVSRkdnnnnsnnnvedddadvakneRENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPdetvnnvtvsvnendntQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETRRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAGSAVSRRWlllsklkqglltkHKESSQGRKSLFPWKFGLeekekveveenrveerIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPCTAPNRGAASPRSKESWDGSS
******************************************TLGHSFCYVR********************************************************RTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGF*****************************************************VHFSAPLGGLYVKRKKKRGILGMSGIRKAFHDKKRPWVVPVLNFV******************************VQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNV**************************************************LWEFL***************RFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLL************LFPWKFGL*************************VGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWM********************************************************IIRI*******SQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFM*****************************
***GLSSLFPCFKPVNH**********QQPDLIFASSEPLDETLGHSFCYVRSSNRFLSPT******************************GFRAISGASVSANTATPRTVLQLDNIYDDATEP***********IVNVSGFESTSSFSAMPLQ******************************************************************************************************************************DRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELK*************************************************************TRRRRLWEFLA*DD******LSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQ*****************PWKFGLEEKEKVEVEENRVE**************V**ELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGW***QVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFM**********************ESWD***
MGSGLSSLFPCFKPVNHTN*********QPDLIFASSEPLDETLGHSFCYVRSSNRFLSPT***************************PETGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLSGPLGALSGPLDQNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAFHDKKRPWVVPVLNFVSRKDNNNNSNNNVEDDDADVAKNERENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVSVNENDNTQEIEIKNDPSVLISENELE*****************RRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLL*********RKSLFPWKFGLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPCT*******************
**SGLSSLFPCFKPVN***********QQPDLIFASSEPLDETLGHSFCYVRSS************************************TGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLSGPLGALSGPLDQ*A************************KRGILGMSGIRKAFHDKKRPWVVPVLNFVS***********************RENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVE*******************************************KRVTF*SEKTETRRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKFGLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPE**********QVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPCTAPNRGAASPRSKE******
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MGSGLSSLFPCFKPVNHTNRTQPDQTQQQPDLIFASSEPLDETLGHSFCYVRSSNRFLSPTPSDRFVSPSQSLRFSPSRAGPGPRGPQPETGFRAISGASVSANTATPRTVLQLDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLSGPLGALSGPLDQNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAFHDKKRPWVVPVLNFVSRKDNNNNSNNNVEDDDADVAKNERENDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVSVNENDNTQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETRRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKFGLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPCTAPNRGAASPRSKESWDGSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query756 2.2.26 [Sep-21-2011]
O82302783 Protein phosphatase 2C 29 yes no 0.929 0.897 0.566 0.0
Q8RWN7856 Protein phosphatase 2C 32 no no 0.914 0.807 0.394 1e-132
Q6ZGY0596 Probable protein phosphat yes no 0.695 0.882 0.382 1e-109
Q9LZ86674 Probable protein phosphat no no 0.738 0.827 0.367 1e-91
Q84T94639 Protein phosphatase 2C 35 no no 0.284 0.336 0.557 4e-68
Q9LQN6662 Probable protein phosphat no no 0.329 0.376 0.518 3e-66
Q9ZV25654 Probable protein phosphat no no 0.301 0.348 0.548 5e-65
Q9SR24650 Probable protein phosphat no no 0.287 0.333 0.528 1e-62
A3AZ89593 Putative protein phosphat no no 0.309 0.394 0.487 4e-55
Q10NB9631 Probable protein phosphat no no 0.298 0.358 0.487 4e-53
>sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/759 (56%), Positives = 510/759 (67%), Gaps = 56/759 (7%)

Query: 1   MGSGLSSLFPCFKPVNHTNRTQPDQTQQ--QPDLIFASSEPLDETLGHSFCYV-RSSNRF 57
           MGSG SSL PCF    H NR +          DLI +  EPLDETLGHS+CYV  SSNRF
Sbjct: 1   MGSGFSSLLPCFNQ-GHRNRRRHSSAANPSHSDLIDSFREPLDETLGHSYCYVPSSSNRF 59

Query: 58  LSPTPSDRFVSPSQSLRFSPSRAGPGPRGP----QPETGFRAISGASVSANTATPRTVLQ 113
           +SP PSDRFVSP+ S R SP       RG     Q  TGFRAISGASVSANT+  +TVLQ
Sbjct: 60  ISPFPSDRFVSPTASFRLSPPHEPGRIRGSGSSEQLHTGFRAISGASVSANTSNSKTVLQ 119

Query: 114 LDNIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGGAYDASERGPFFLS 173
           L++IYDDATE +  GG  V+ S+VN +GFE TSSFSA+PLQP P        +R   F+S
Sbjct: 120 LEDIYDDATESSFGGG--VRRSVVNANGFEGTSSFSALPLQPGP--------DRSGLFMS 169

Query: 174 GPL--GALSGPLDQNAA--SEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAF--HD 227
           GP+  GA SGPLD  A   S      VHFSAPLGG+Y K+++K+    +S     F    
Sbjct: 170 GPIERGATSGPLDPPAGEISRSNSAGVHFSAPLGGVYSKKRRKKKKKSLS-WHPIFGGEK 228

Query: 228 KKRPWVVPVLNFVSRKDNNNNSNNNVEDDDADVAKNERENDNNVQWALGKAGEDRVHVVV 287
           K+RPWV+PV NFV      N    +VE      A      +N++QWALGKAGEDRV + V
Sbjct: 229 KQRPWVLPVSNFVVGAKKENIVRPDVE------AMAASSGENDLQWALGKAGEDRVQLAV 282

Query: 288 SEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVSVNEN 347
            E+ GWLF GIYDGFNGPDAPEFLM NLYRAV++EL+GLFW++EE D+   +++    E 
Sbjct: 283 FEKQGWLFAGIYDGFNGPDAPEFLMANLYRAVHSELQGLFWELEEEDDNPTDISTRELEQ 342

Query: 348 DNTQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETR-RRRLWEFLAEDDQEDGLDL 406
               E  +    S      E E++E  KR+T   E  E + R+RLWE LAE   ED LDL
Sbjct: 343 QGEFEDHVNEMASSSCPATEKEEEEMGKRLTSSLEVVEVKERKRLWELLAEAQAEDALDL 402

Query: 407 SGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKFGLEE 466
           SGS+RFAFSVDDAI    A S  S+RWLLLSKLKQGL    K+   GRK LFPWK G+EE
Sbjct: 403 SGSDRFAFSVDDAIGAGNAVSVGSKRWLLLSKLKQGL---SKQGISGRK-LFPWKSGVEE 458

Query: 467 KEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLDTNPE 526
            E  EV+   VEE + +  K+R+ G VDHELVL+A+S  L+ TE A+L+MT+KVL+TNPE
Sbjct: 459 NETEEVDNVGVEEGVDKRRKRRKAGTVDHELVLKAMSNGLEATEQAFLEMTDKVLETNPE 518

Query: 527 LALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQV---------DTG 577
           LALMGSCLLV LMRD+DVY+MN+GDSRA+VAQYQ E    S     +V         D G
Sbjct: 519 LALMGSCLLVALMRDDDVYIMNIGDSRALVAQYQVEETGESVETAERVEERRNDLDRDDG 578

Query: 578 SSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDD 637
           +    +V+ S  T+         +EAP    KL A+QL+TDHSTSIE+E+ RIKNEHPDD
Sbjct: 579 NKEPLVVDSSDSTVN--------NEAPLPQTKLVALQLTTDHSTSIEDEVTRIKNEHPDD 630

Query: 638 SQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLC 697
           + CIVNDRVKGRLKVTRAFGAGFLK+PKLND LLEMFRNEYIGT PYISCTPSL H RL 
Sbjct: 631 NHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTDPYISCTPSLRHYRLT 690

Query: 698 PRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDPC 736
             DQF+VLSSDGLYQYL+N EVVSL    MEKFPDGDP 
Sbjct: 691 ENDQFMVLSSDGLYQYLSNVEVVSLA---MEKFPDGDPA 726
Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 Back     alignment and function description
>sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZ86|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1 Back     alignment and function description
>sp|Q84T94|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 Back     alignment and function description
>sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SR24|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1 Back     alignment and function description
>sp|A3AZ89|P2C46_ORYSJ Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2 Back     alignment and function description
>sp|Q10NB9|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query756
225427238822 PREDICTED: protein phosphatase 2C 29-lik 0.917 0.844 0.695 0.0
255557627749 protein phosphatase 2c, putative [Ricinu 0.891 0.899 0.675 0.0
449461999781 PREDICTED: protein phosphatase 2C 29-lik 0.923 0.893 0.648 0.0
449521150782 PREDICTED: protein phosphatase 2C 29-lik 0.923 0.892 0.647 0.0
224138072783 predicted protein [Populus trichocarpa] 0.880 0.850 0.629 0.0
297742114754 unnamed protein product [Vitis vinifera] 0.808 0.810 0.652 0.0
356495545737 PREDICTED: protein phosphatase 2C 29-lik 0.879 0.902 0.617 0.0
356510657696 PREDICTED: protein phosphatase 2C 29-lik 0.835 0.908 0.599 0.0
357476701818 Protein phosphatase 2C [Medicago truncat 0.898 0.830 0.560 0.0
3608153743 hypothetical protein [Arabidopsis thalia 0.929 0.946 0.566 0.0
>gi|225427238|ref|XP_002278429.1| PREDICTED: protein phosphatase 2C 29-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  969 bits (2506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/753 (69%), Positives = 596/753 (79%), Gaps = 59/753 (7%)

Query: 1   MGSGLSSLFPCFKPVNHTNRTQPDQTQQQPDLIFASSEPLDETLGHSFCYVRSSNRFLSP 60
           MGSGLS L PCF P + T         ++P+++F +SEPLDETLGHSFCYVRSS RFLSP
Sbjct: 54  MGSGLSQLCPCFVPASRT-------AVEEPEVVFTASEPLDETLGHSFCYVRSSARFLSP 106

Query: 61  TPSDRFVSPSQSLRFSPS-----RAGPGPRGPQPETGFRAISGASVSANTATPRTVLQLD 115
           T SDRFVSPS SLRFSPS     RA  GP    PETGF+AISGASVSANT+TPRTVLQL+
Sbjct: 107 TQSDRFVSPSHSLRFSPSHEPVGRARAGP----PETGFKAISGASVSANTSTPRTVLQLE 162

Query: 116 NIYDDATEPTCAGGYGVKSSIVNVSGFESTSSFSAMPLQPVPRGG-AYDASERGPFFLSG 174
           NIYDDAT+  C GG GVK SIVN  GFEST+SFSA+PLQPVPRGG A    +RG FF+SG
Sbjct: 163 NIYDDATD--CVGG-GVKGSIVN--GFESTASFSALPLQPVPRGGEASGPIDRG-FFMSG 216

Query: 175 PL--GALSGPLDQNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSGIRKAFH----DK 228
           P+  GALSGPLD NA S+  GGRVHFSAPL GLYVK+K+K+GI   S IRKAF+    +K
Sbjct: 217 PIERGALSGPLDANAGSD--GGRVHFSAPLNGLYVKKKRKKGI---SAIRKAFYRNFSEK 271

Query: 229 KRPWVVPVLNFVSRKDNNNNSNNNVEDDDADVAKNERENDNNVQWALGKAGEDRVHVVVS 288
           KRPWVVPVLNFV RK+              D   +E ++++NVQWALGKAGEDRVHVVVS
Sbjct: 272 KRPWVVPVLNFVGRKEVPAA---------GDGGDSEVKSESNVQWALGKAGEDRVHVVVS 322

Query: 289 EEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPD------ETVNNVTV 342
           EEHGWLFVGIYDGFNGPDAPEFLMGNLYRAV+NEL+GLFWDVEE D      +++ +   
Sbjct: 323 EEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELEGLFWDVEEADPIEATNQSMESCVG 382

Query: 343 SVNENDNTQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETRRRRLWEFLAEDDQED 402
            V    N +EI + ++ S         D+  AKRVTF+ E  E RRRRLWEFLAEDDQED
Sbjct: 383 EVGNESNNKEIGVGHEDS----NPPPTDRGSAKRVTFQPEPPEIRRRRLWEFLAEDDQED 438

Query: 403 GLDLSGSERFAFSVDDAISVNKAGSAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKF 462
           GLDLSGS+RFAFSVDDA+SVN AGSAVSRRWLLLSKLK GL +KHKE   GRK LFPW+F
Sbjct: 439 GLDLSGSDRFAFSVDDALSVNNAGSAVSRRWLLLSKLKHGL-SKHKEG-HGRK-LFPWRF 495

Query: 463 GLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRALDLTELAYLDMTEKVLD 522
           GLE+KEKVEV+ NRVEE     G+KR+VGPVDHELVL+A+SRAL+LTELAYLDMT+KVLD
Sbjct: 496 GLEDKEKVEVD-NRVEETSGSRGRKRKVGPVDHELVLKAMSRALELTELAYLDMTDKVLD 554

Query: 523 TNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDG 582
            NPELALMGSCLLVVLMRDEDVYVMNVGDSRA+VAQY+ +    S   KG+    S++D 
Sbjct: 555 QNPELALMGSCLLVVLMRDEDVYVMNVGDSRALVAQYETQEGSSSVESKGEGKNRSNIDD 614

Query: 583 IVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIV 642
           IVE S+    E+  KV  +E   + M+LTA+QLSTDHSTSIEEE+IRIKNEHPDDSQCIV
Sbjct: 615 IVEVSTDGC-EKENKVV-NEDFVKGMRLTALQLSTDHSTSIEEEVIRIKNEHPDDSQCIV 672

Query: 643 NDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQF 702
           NDRVKGRLKVTRAFGAGFLK+PK ND LLEMFRNEYIGTAPYISC+PSLC+ +LCPRDQF
Sbjct: 673 NDRVKGRLKVTRAFGAGFLKQPKWNDVLLEMFRNEYIGTAPYISCSPSLCYHQLCPRDQF 732

Query: 703 LVLSSDGLYQYLTNQEVVSLVESFMEKFPDGDP 735
           L+LSSDGLYQYL+NQEVV  VE FMEKFP+GDP
Sbjct: 733 LILSSDGLYQYLSNQEVVCEVEKFMEKFPEGDP 765

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255557627|ref|XP_002519843.1| protein phosphatase 2c, putative [Ricinus communis] gi|223540889|gb|EEF42447.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449461999|ref|XP_004148729.1| PREDICTED: protein phosphatase 2C 29-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449521150|ref|XP_004167593.1| PREDICTED: protein phosphatase 2C 29-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224138072|ref|XP_002326511.1| predicted protein [Populus trichocarpa] gi|222833833|gb|EEE72310.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742114|emb|CBI33901.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495545|ref|XP_003516637.1| PREDICTED: protein phosphatase 2C 29-like [Glycine max] Back     alignment and taxonomy information
>gi|356510657|ref|XP_003524053.1| PREDICTED: protein phosphatase 2C 29-like [Glycine max] Back     alignment and taxonomy information
>gi|357476701|ref|XP_003608636.1| Protein phosphatase 2C [Medicago truncatula] gi|355509691|gb|AES90833.1| Protein phosphatase 2C [Medicago truncatula] Back     alignment and taxonomy information
>gi|3608153|gb|AAC36186.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O82302P2C29_ARATH3, ., 1, ., 3, ., 1, 60.56650.92980.8978yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.946
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query756
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-35
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-30
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-22
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-09
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-06
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 7e-05
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-04
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  132 bits (335), Expect = 7e-35
 Identities = 65/236 (27%), Positives = 90/236 (38%), Gaps = 78/236 (33%)

Query: 494 DHELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSR 553
             E +  AL +A    +   L+         P+ A  G+  +V L+R   +YV NVGDSR
Sbjct: 67  SEEDIEEALRKAFLRADEEILEE----AQDEPDDARSGTTAVVALIRGNKLYVANVGDSR 122

Query: 554 AIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAV 613
           A++                                     R G+              AV
Sbjct: 123 AVLC------------------------------------RNGE--------------AV 132

Query: 614 QLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEM 673
           QL+ DH    EEE  RI+         + N RV G L VTRA G   LK           
Sbjct: 133 QLTKDHKPVNEEERERIEKAGGR----VSNGRVPGVLAVTRALGDFDLK----------- 177

Query: 674 FRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEK 729
                    P +S  P +  ++L   D FL+L+SDGL+  L+NQE V +V S + K
Sbjct: 178 ---------PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK 224

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 756
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.95
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.95
KOG0699542 consensus Serine/threonine protein phosphatase [Si 99.95
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.94
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.9
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.31
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.26
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.2
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.19
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 97.68
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 97.59
KOG0699542 consensus Serine/threonine protein phosphatase [Si 87.8
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-79  Score=659.53  Aligned_cols=304  Identities=53%  Similarity=0.839  Sum_probs=268.8

Q ss_pred             CCCCceeecCcCCCceEEEEEecCcceEEEEEecCCCCCChHHHHHHHHHHHHHHHhhcccccccCCCcccccccccccC
Q 004401          267 NDNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELKGLFWDVEEPDETVNNVTVSVNE  346 (756)
Q Consensus       267 ~~~~~qwa~GkAgEDRvhvv~SEe~gwlFvGIYDGfnGpdA~dfL~~~Ly~~i~~eL~gl~w~~~~~~~~~~~~~~~~~e  346 (756)
                      ...++|||||++||||||+++|||+||+|||||||||||||++||+.|||++|++||++|+|++++.-            
T Consensus        73 ~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f------------  140 (390)
T KOG0700|consen   73 QANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERF------------  140 (390)
T ss_pred             hhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhcccc------------
Confidence            34599999999999999999999999999999999999999999999999999999999999887511            


Q ss_pred             CCcchhhhhcCCCcccccchhhhhHhhhhhccccchhhhHHhhhhhhhhhcccccccccCCCCccccccccchhhccccC
Q 004401          347 NDNTQEIEIKNDPSVLISENELEDKERAKRVTFESEKTETRRRRLWEFLAEDDQEDGLDLSGSERFAFSVDDAISVNKAG  426 (756)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  426 (756)
                                                                                                      
T Consensus       141 --------------------------------------------------------------------------------  140 (390)
T KOG0700|consen  141 --------------------------------------------------------------------------------  140 (390)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cchhhHHHHHHhhhhcccccccccccccccccccccccchhhhHHHHHhHHHHHhhhcCccCcCCCCCHHHHHHHHHHHH
Q 004401          427 SAVSRRWLLLSKLKQGLLTKHKESSQGRKSLFPWKFGLEEKEKVEVEENRVEERIVQSGKKRRVGPVDHELVLRALSRAL  506 (756)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~dhe~Vl~AL~rAl  506 (756)
                                                      +|...+...+.+..+.+.+           ......+..|++||.+||
T Consensus       141 --------------------------------~~e~~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~al~~Af  177 (390)
T KOG0700|consen  141 --------------------------------PSEYKSEELEHLLVYWKQL-----------SSADQRHGDVLEALSKAF  177 (390)
T ss_pred             --------------------------------ccccccchhhhhhhhhhcc-----------cccCccchhHHHHHHHHH
Confidence                                            1111111111111111110           111122678999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCCCcceeeeeeEECCeEEEEEcccCcEEEEEecCCcccCCCCCCCcccCCCCccccccc
Q 004401          507 DLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEE  586 (756)
Q Consensus       507 ~~Te~afle~~~k~l~e~pela~mGSTalVvLI~~edLYVANVGDSRAVL~r~~~~~~~~~~~~~~~~~~~~~l~~i~ee  586 (756)
                      ++||++|++++++++..+|+++.|||||+|++|++.+|||||+|||||||+.....+                       
T Consensus       178 ~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~-----------------------  234 (390)
T KOG0700|consen  178 EATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNG-----------------------  234 (390)
T ss_pred             HHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCC-----------------------
Confidence            999999999999999999999999999999999999999999999999998877321                       


Q ss_pred             cccccccCCCccccCcchhhcccceEEEcCCCCCCChHHHHHHHHhhCCCCCcccccc--cccCcceeeeeccCCccCCC
Q 004401          587 SSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVND--RVKGRLKVTRAFGAGFLKKP  664 (756)
Q Consensus       587 ~~~~l~~~~~~~~~~~~~~~~~~l~a~QLT~DHsps~eeE~~RI~~~gpdd~~~I~n~--RVkG~L~VTRAfGD~~lK~p  664 (756)
                                           ..|.++|||+||++++++|+.||+.+||+|+.+++++  ||+|.|+|||||||++||+|
T Consensus       235 ---------------------~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~  293 (390)
T KOG0700|consen  235 ---------------------SWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWP  293 (390)
T ss_pred             ---------------------CeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecch
Confidence                                 1268999999999999999999999999999999998  99999999999999999999


Q ss_pred             cch-hHHHHhhhhcccCCCCceeeeceEEEEEecCCCeEEEEEccCCCCCCCHHHHHHHHHHhhhc-CCcchHHHHHHHH
Q 004401          665 KLN-DTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEK-FPDGDPCTAPNRG  742 (756)
Q Consensus       665 k~N-~alle~fr~~yigt~PyVS~ePdV~~~rL~~~D~FLVLASDGLwD~LSnEEVV~iV~~f~e~-~p~~dpAq~LVee  742 (756)
                      ++| ++|++||+++|++|+|||+|+|+|++|+|.++|+||||||||||++|||||||.+|..|+.. .|.+++|++||++
T Consensus       294 ~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~  373 (390)
T KOG0700|consen  294 EFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRH  373 (390)
T ss_pred             hhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence            999 99999999999999999999999999999999999999999999999999999999999887 8999999999999


Q ss_pred             HHcCCCC
Q 004401          743 AASPRSK  749 (756)
Q Consensus       743 Al~rgS~  749 (756)
                      |+.+.++
T Consensus       374 aL~~aak  380 (390)
T KOG0700|consen  374 ALGRAAK  380 (390)
T ss_pred             HHhhhhh
Confidence            9988765

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query756
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-13
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 5e-13
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 5e-06
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 5e-04
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-04
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 6e-04
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-04
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 6e-04
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 6e-04
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHP-DDSQCIV-NDRVKGRLKVTRAFGAGFLK------ 662
           +AV LS DH+   E E+ R+K EHP ++++ +V  DR+ G L   RAFG    K      
Sbjct: 235 SAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQ 294
Query: 663 -------KPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLT 715
                    +LND     F      T PY++  P + + RL P+D+FLVL++DGL++ + 
Sbjct: 295 KRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 716 NQEVVSLVESFMEKFPDGDPC 736
            Q+VV +V  ++       P 
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPI 375
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query756
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 5e-44
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-07
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-27
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 6e-24
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 4e-23
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 8e-22
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-21
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-21
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-04
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 3e-21
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-20
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 9e-19
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-17
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 6e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-10
3rnr_A211 Stage II sporulation E family protein; structural 2e-04
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 8e-04
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  164 bits (416), Expect = 5e-44
 Identities = 61/259 (23%), Positives = 93/259 (35%), Gaps = 60/259 (23%)

Query: 508 LTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGS 567
             E    D    +      +A  G+   V  +   D++V N GDSRA+            
Sbjct: 177 SLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAM------------ 224

Query: 568 GWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEI 627
                                  LG +           +    +AV LS DH+   E E+
Sbjct: 225 -----------------------LGVQE----------EDGSWSAVTLSNDHNAQNEREL 251

Query: 628 IRIKNEHPDDSQ--CIVNDRVKGRLKVTRAFGAGFLKKPK-------------LNDTLLE 672
            R+K EHP +     +  DR+ G L   RAFG    K                LND    
Sbjct: 252 QRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311

Query: 673 MFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPD 732
            F      T PY++  P + + RL P+D+FLVL++DGL++ +  Q+VV +V  ++     
Sbjct: 312 KFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHH 371

Query: 733 GDPCTAPNRGAASPRSKES 751
             P           +    
Sbjct: 372 QQPIAVGGYKVTLGQMHGL 390
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query756
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.96
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.95
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.95
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.93
3rnr_A211 Stage II sporulation E family protein; structural 99.9
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 98.82
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 98.59
3f79_A255 Probable two-component response regulator; adaptor 98.29
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 97.94
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 96.12
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=4.5e-42  Score=381.24  Aligned_cols=203  Identities=31%  Similarity=0.398  Sum_probs=163.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh------hhcCCCCCCCcceeeeeeEECCeEEEEEcccCcEEEEEecCCcccCCCCC
Q 004401          497 LVLRALSRALDLTELAYLDMTEKV------LDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWM  570 (756)
Q Consensus       497 ~Vl~AL~rAl~~Te~afle~~~k~------l~e~pela~mGSTalVvLI~~edLYVANVGDSRAVL~r~~~~~~~~~~~~  570 (756)
                      .+.+||++||.++++.|++.....      ....++...||||+++++|.++++||||||||||||++...+        
T Consensus       160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~--------  231 (467)
T 2pnq_A          160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEED--------  231 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTT--------
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCC--------
Confidence            478999999999999998765320      011233456999999999999999999999999999997410        


Q ss_pred             CCcccCCCCccccccccccccccCCCccccCcchhhcccceEEEcCCCCCCChHHHHHHHHhhCCCCC--cccccccccC
Q 004401          571 KGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDS--QCIVNDRVKG  648 (756)
Q Consensus       571 ~~~~~~~~~l~~i~ee~~~~l~~~~~~~~~~~~~~~~~~l~a~QLT~DHsps~eeE~~RI~~~gpdd~--~~I~n~RVkG  648 (756)
                                                           +.|.++|||.||++.++.|+.||.++||...  .++.++||+|
T Consensus       232 -------------------------------------g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G  274 (467)
T 2pnq_A          232 -------------------------------------GSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLG  274 (467)
T ss_dssp             -------------------------------------SCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTT
T ss_pred             -------------------------------------CcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCcccc
Confidence                                                 2457999999999999999999999998653  3556789999


Q ss_pred             cceeeeeccCCccCCCcchhHHHHhhh----------------hcccCCCCceeeeceEEEEEecCCCeEEEEEccCCCC
Q 004401          649 RLKVTRAFGAGFLKKPKLNDTLLEMFR----------------NEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQ  712 (756)
Q Consensus       649 ~L~VTRAfGD~~lK~pk~N~alle~fr----------------~~yigt~PyVS~ePdV~~~rL~~~D~FLVLASDGLwD  712 (756)
                      .|.|||||||..+|.+.   .+...+.                .....++|||+++|+|..++|.++|+|||||||||||
T Consensus       275 ~l~vtRAlGd~~~K~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd  351 (467)
T 2pnq_A          275 LLMPFRAFGDVKFKWSI---DLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE  351 (467)
T ss_dssp             TBSSSBCEECGGGTSCH---HHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHT
T ss_pred             ccccchhcCchhhcccc---hhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccc
Confidence            99999999999998642   2222211                2233478999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhhhcC----C-----------------------------cchHHHHHHHHHHcCC
Q 004401          713 YLTNQEVVSLVESFMEKF----P-----------------------------DGDPCTAPNRGAASPR  747 (756)
Q Consensus       713 ~LSnEEVV~iV~~f~e~~----p-----------------------------~~dpAq~LVeeAl~rg  747 (756)
                      +|+++||+++|..++...    |                             +.++|.+||+.|+..|
T Consensus       352 ~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~  419 (467)
T 2pnq_A          352 TMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNN  419 (467)
T ss_dssp             TSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC--
T ss_pred             cCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCC
Confidence            999999999998876421    1                             2568999999999876
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 756
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-09
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 0.004
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 6e-09
 Identities = 42/238 (17%), Positives = 73/238 (30%), Gaps = 66/238 (27%)

Query: 496 ELVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAI 555
              +  +   +    L   +    + +        GS  + VL+  +  Y +N GDSR +
Sbjct: 90  APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGL 149

Query: 556 VAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQL 615
           + + +                                                       
Sbjct: 150 LCRNRKV--------------------------------------------------HFF 159

Query: 616 STDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFR 675
           + DH  S   E  RI+N        ++  RV G L V+RA G    K             
Sbjct: 160 TQDHKPSNPLEKERIQNAGG----SVMIQRVNGSLAVSRALGDFDYKCVH---------- 205

Query: 676 NEYIGTAPYISCTPSLCHLRL-CPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPD 732
                T   +S  P +  +      DQF++L+ DG++  + N+E+   V S +E   D
Sbjct: 206 -GKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD 262
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query756
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.95
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-41  Score=349.28  Aligned_cols=187  Identities=24%  Similarity=0.292  Sum_probs=163.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeeeeeEECCeEEEEEcccCcEEEEEecCCcccCCCCCCCcccC
Q 004401          497 LVLRALSRALDLTELAYLDMTEKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDT  576 (756)
Q Consensus       497 ~Vl~AL~rAl~~Te~afle~~~k~l~e~pela~mGSTalVvLI~~edLYVANVGDSRAVL~r~~~~~~~~~~~~~~~~~~  576 (756)
                      .+.+||++||..+++.+..+.+    ..+....||||+++++|.++++||+|||||||||++.+                
T Consensus        95 ~~~~al~~a~~~~~~~~~~~~~----~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~----------------  154 (295)
T d1a6qa2          95 NVKNGIRTGFLEIDEHMRVMSE----KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR----------------  154 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----HTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT----------------
T ss_pred             HHHHHHHHHHHHHHHHHhhhhh----hccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc----------------
Confidence            5788999999999998876653    34556679999999999999999999999999999876                


Q ss_pred             CCCccccccccccccccCCCccccCcchhhcccceEEEcCCCCCCChHHHHHHHHhhCCCCCcccccccccCcceeeeec
Q 004401          577 GSSMDGIVEESSVTLGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAF  656 (756)
Q Consensus       577 ~~~l~~i~ee~~~~l~~~~~~~~~~~~~~~~~~l~a~QLT~DHsps~eeE~~RI~~~gpdd~~~I~n~RVkG~L~VTRAf  656 (756)
                                                        .+++||.||++.++.|+.||.+.|+    .+...|+.|.|.+||||
T Consensus       155 ----------------------------------~~~~lT~dH~~~~~~E~~Ri~~~gg----~v~~~r~~g~l~~tRa~  196 (295)
T d1a6qa2         155 ----------------------------------KVHFFTQDHKPSNPLEKERIQNAGG----SVMIQRVNGSLAVSRAL  196 (295)
T ss_dssp             ----------------------------------EEEEECCCCCTTSHHHHHHHHHTTC----CEETTEETTTBSCSBCE
T ss_pred             ----------------------------------cceeeccccCcccHHHHhhHhhcCC----cccccccCCceeeeecc
Confidence                                              7899999999999999999999994    56678999999999999


Q ss_pred             cCCccCCCcchhHHHHhhhhcccCCCCceeeeceEEEEEec-CCCeEEEEEccCCCCCCCHHHHHHHHHHhhhc-CCcch
Q 004401          657 GAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLC-PRDQFLVLSSDGLYQYLTNQEVVSLVESFMEK-FPDGD  734 (756)
Q Consensus       657 GD~~lK~pk~N~alle~fr~~yigt~PyVS~ePdV~~~rL~-~~D~FLVLASDGLwD~LSnEEVV~iV~~f~e~-~p~~d  734 (756)
                      ||..+|....           .....++|+++|++..+.+. ++|.|||||||||||+|+++||+++|...+.. ..+..
T Consensus       197 Gd~~~k~~~~-----------~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~  265 (295)
T d1a6qa2         197 GDFDYKCVHG-----------KGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEK  265 (295)
T ss_dssp             ECGGGSCCTT-----------CCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHH
T ss_pred             CcHHhhhccc-----------cCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHH
Confidence            9999987532           23456789999999999986 56789999999999999999999999776543 45678


Q ss_pred             HHHHHHHHHHcCCCCCCC
Q 004401          735 PCTAPNRGAASPRSKESW  752 (756)
Q Consensus       735 pAq~LVeeAl~rgS~Dsw  752 (756)
                      +|+.|+++|+.+++.|+.
T Consensus       266 ~a~~Lv~~A~~~gs~DNi  283 (295)
T d1a6qa2         266 VCNEVVDTCLYKGSRDNM  283 (295)
T ss_dssp             HHHHHHHHHHHTTCCSCE
T ss_pred             HHHHHHHHHHhcCCCCCe
Confidence            999999999999999974
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure