Citrus Sinensis ID: 004452

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750---
Protein Sequence
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGHDKHG
Secondary Structure (PSIPRED)
ccccccccccccHHHHHcccccHHcccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccEEEEEcccEEEEEEcccEEEEccccccEEEEEccccccccccccccEEEEEccccEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccEEcccccccccccccccccccccccccHHHHHHcccccccccccEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEcccccEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEEEEcccEEEEEccccccEEEEEcccccccccccHHHHHHHHccccEEEEcccccc
Coil and Loop (DISEMBL)
MFEYERsaltlpkvfsragnskeiklssgkrkaeSVRSCYYALRKRihnepfnsidlsflnapgnrnfygngdeppsrncmlgdpmanhfglqdsnldvmhrkfpdipmdddascrdgptlhrfhggfdhpgeedfsmqqgemheeiphifeenqsfrgngarvvelglpgqvpnlfeadhmeanplstygqtnddagnictlegnqvfrspipdcgapfqdlefssplpempiwttvedsssptitvddsfrekdlhsgdnyalpddsgakdksapgydfvhgnsklKMQMSCDElkneasntEGYLEELSNSLlnftndeeflfmdvdgkemidkSYYDGLSLLlnspneakhdhlpspepetsvtpdylanasaacpvesvenvqlpspatvsdpqfpeqndgimictlntedpeipcnddaflpnnllpssvSIAKrqnfkdagnpfsssvkdfsgnqkvsdqvlmqggstqmvgsqvipgshkhhpvgdsgvkfelhscnssqlaagtscrgsiqnnsmntskdsLQCARLKQDNKEIAMVKDLghtltdsslkkpnfvsngcksherntngvkqeldypaitqeshalnvevgslhipdaepimnpsttepedpsvesddddvpyfsDIEAMILdmdldpddqgiYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGrhskhyikkpevllgratedvvvdidlgregrtnkisrRQVYNVFVKSLFIKIGHDKHG
Flexible Loop (DISEMBL)
mfeyersaltlpkvfsragnskeiklssgkrkaesVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWttvedsssptitVDDSFREKDLHSgdnyalpddsgakdkSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLghtltdsslkkpnFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYEQEvskyqhedtRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKpevllgratedvvvdidlgregrtnkisrrqvynvFVKSLfikighdkhg
Low Complexity Region (SEG)
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTepedpsvesddddvpYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGHDKHG
Disordered region (IsUnstruct)
***********************************VRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFY*******************************************************************************************GARVVELGLPGQVPNLFEA**********YGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEF*******PIWT***********************************************************************LEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLL**********************************************************GIMICTLNTEDPEIPCNDDAFLPN*********************************************************************************************************************************************************************************************************YFSDIEAMILDMDLD***QGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIG*****
Disordered Region (DISOPRED)
**********************************SVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDD******PTLHRFHGG*********************HIFEENQS***********************************************************************************************************ALPDDSGAKDKSAPGYDFV************************YLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLL******************************************************EQNDGIMICTLNTEDPEIPCNDDAFL**************************************************************************************************T*KDSLQ*A*********************************************************************PDAEPIM*******************PYFSDIEAMILDMDLDPDDQGIYEQEV*************RLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGHDK**
Disordered Region (DISEMBL)
MFEYERSALTLPKVFSRAGNS**************VRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNE**************VTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNP*************DDDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGHDKHG
Disordered Region (DISPRO)
********LTLPKVFSR*GNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLP*****TSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIA**********************************************************************AAGTSC****************************AMVKDLGH*LTDSSLKKPNF******************LDYP*****************************************DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGH****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSxxxxxxxxxxxxxxxxxxxxxLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKSLFIKIGHDKHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	753	2.2.26 [Sep-21-2011]
Q99L90	462	Microspherule protein 1 O	yes	no	0.142	0.231	0.341	7e-07
Q96EZ8	462	Microspherule protein 1 O	yes	no	0.142	0.231	0.333	2e-06

>sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 10/117 (8%)

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY--MQRAIL 684
           D V  FSD E +I D  L      + E E++       +R I +LEQ  H +  +  +I 
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSIT 334

Query: 685 SHGA-------FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
             G+        A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct: 335 GMGSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.
Mus musculus (taxid: 10090)

>sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 10/117 (8%)

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY-------- 678
           D V  FSD E +I D  L      + E E+        +R I +LEQ  H +        
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELMVADRRQ-KREIRQLEQELHKWQVLVDSIT 334

Query: 679 -MQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
            M      +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct: 335 GMSSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	753
359492711	1030	PREDICTED: uncharacterized protein LOC10	0.960	0.701	0.520	0.0
302142589	789	unnamed protein product [Vitis vinifera]	0.863	0.823	0.502	1e-180
255538816	776	conserved hypothetical protein [Ricinus	0.622	0.604	0.512	1e-122
449438524	870	PREDICTED: uncharacterized protein LOC10	0.925	0.801	0.428	1e-121
356509648	841	PREDICTED: uncharacterized protein LOC10	0.903	0.808	0.379	1e-112
357466877	845	Microspherule protein [Medicago truncatu	0.880	0.784	0.358	1e-109
356518000	841	PREDICTED: uncharacterized protein LOC10	0.900	0.806	0.375	1e-101
297735058	819	unnamed protein product [Vitis vinifera]	0.841	0.774	0.359	6e-95
224082944	733	predicted protein [Populus trichocarpa]	0.568	0.583	0.461	5e-91
224066050	728	predicted protein [Populus trichocarpa]	0.551	0.570	0.432	1e-84

>gi|359492711|ref|XP_002280739.2| PREDICTED: uncharacterized protein LOC100254089 [Vitis vinifera]

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/771 (52%), Positives = 504/771 (65%), Gaps = 48/771 (6%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M E+ERSA TLP  F+R GNSKE K   GKRKAE++RSCYYALRKRI NEPFNS+DLSFL
Sbjct: 210 MIEFERSASTLPSKFNRFGNSKENKCVPGKRKAETIRSCYYALRKRICNEPFNSMDLSFL 269

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
            AP N N  GNGDEP S N ML DP++NHF  Q+ +LD+MH  FP +  D+ A+   G +
Sbjct: 270 VAPSNSNCVGNGDEPVSPNYMLEDPISNHFRTQEPSLDIMHCAFPQMVTDNAAASGAGTS 329

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQV--PNLFE 178
            H FH    +P +ED  ++Q  +H+EIP I  EN    GN + + ELG P ++   NLFE
Sbjct: 330 AHGFHAAVQNPVKEDLPIEQNSIHKEIPQILGENLPHTGNCSGIDELGEPKELLACNLFE 389

Query: 179 ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTT 237
           AD +EA P ST+   N D GN+C+   GNQ F  P  DCGA F +L +SSPLP MPIW T
Sbjct: 390 ADDLEAKPPSTFDLINSDLGNVCSEFGGNQAFDLPGSDCGASFDNLGYSSPLPGMPIWDT 449

Query: 238 VEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDEL 297
           VE  S+P + VD S  +KD H+ D +ALP+D  AK  S  GYD V   +KLK  M CD+L
Sbjct: 450 VEGISAPDLPVDTSLGKKDHHTEDTFALPNDGHAKINSVSGYDVVPSETKLKNSMPCDQL 509

Query: 298 KNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHD 356
            N  S+ +GYL ELSNSLL+F ND E LFMDVDGK++IDKSYYDGL SLLL+SP ++  D
Sbjct: 510 NN--SSPDGYLAELSNSLLDFPND-ELLFMDVDGKDIIDKSYYDGLNSLLLSSPTDSNQD 566

Query: 357 HLPS-PEPETSVTPD-YLANASAACPVE-----SVE--------NVQLPSPATVSD--PQ 399
           H+P   EPE SV PD YL     AC  E     S+         N + P  +T  D  PQ
Sbjct: 567 HVPDITEPEASVGPDAYLVIPQGACAGELDNNGSIHCGDGHADCNPEAPMLSTAVDLNPQ 626

Query: 400 FPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFS 459
           FPE  +G++ C LNTEDP+IPCNDD FLPN +  S +S A + +F +A NP SS+VKDF+
Sbjct: 627 FPEMCNGVICCALNTEDPDIPCNDDVFLPNQIPLSPLSSAAQLSFHEANNPTSSAVKDFT 686

Query: 460 GNQKVSDQV-------LMQGG----STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQ 508
            NQK S++        L   G    S++M GSQ +     +HPVGD  +KFEL   +S+ 
Sbjct: 687 DNQKSSERCPSLLKRELKSPGQSHVSSRMKGSQALSKIGLNHPVGDCDIKFELTESDSTH 746

Query: 509 LA---AGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVS 565
           +A   AG  C G+   N +N    +     LK++ KEI   + + +  TDS ++KP    
Sbjct: 747 MASRSAGLVC-GNSSLNPVNVKAHTPLPKMLKEETKEIKPARQMSYNSTDSFMEKPVHGF 805

Query: 566 NGCKSH-ERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVES 624
           +G +S+ + N  G+KQE+D  +  Q   AL+           +P++NPS+ + E+  +ES
Sbjct: 806 DGFRSYPQTNACGIKQEVDAISTAQNHQALDFAA-------LDPVVNPSSPDQEEQPIES 858

Query: 625 DDDDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAIL 684
            DDD+PY SDIEAMILDMDLDPDDQ     EVS+YQ+E+T+RAIIRLEQG HSYMQR I 
Sbjct: 859 -DDDIPYVSDIEAMILDMDLDPDDQEYCRGEVSRYQYENTKRAIIRLEQGFHSYMQRTIA 917

Query: 685 SHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQV 735
           +HGAFA+LYGRHSKHYIKKPEVLLGRATEDV VDIDLGREG  NKISRRQ 
Sbjct: 918 THGAFAVLYGRHSKHYIKKPEVLLGRATEDVTVDIDLGREGCANKISRRQA 968

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142589|emb|CBI19792.3| unnamed protein product [Vitis vinifera]

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 372/741 (50%), Positives = 463/741 (62%), Gaps = 91/741 (12%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M E+ERSA TLP  F+R GNSKE K   GKRKAE++RSCYYALRKRI NEPFNS+DLSFL
Sbjct: 72  MIEFERSASTLPSKFNRFGNSKENKCVPGKRKAETIRSCYYALRKRICNEPFNSMDLSFL 131

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
            AP N N  GNGDEP S N ML DP++NHF  Q+ +LD+MH  FP +  D+ A+   G +
Sbjct: 132 VAPSNSNCVGNGDEPVSPNYMLEDPISNHFRTQEPSLDIMHCAFPQMVTDNAAASGAGTS 191

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQV--PNLFE 178
            H FH                     IP I  EN    GN + + ELG P ++   NLFE
Sbjct: 192 AHGFHAA-------------------IPQILGENLPHTGNCSGIDELGEPKELLACNLFE 232

Query: 179 ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTT 237
           AD +EA P ST+   N D GN+C+   GNQ F  P  DCGA F +L +SSPLP MPIW T
Sbjct: 233 ADDLEAKPPSTFDLINSDLGNVCSEFGGNQAFDLPGSDCGASFDNLGYSSPLPGMPIWDT 292

Query: 238 VEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDEL 297
           VE  S+P + VD S  +KD H+ D +ALP+D  AK  S  GYD V   +KLK  M CD+L
Sbjct: 293 VEGISAPDLPVDTSLGKKDHHTEDTFALPNDGHAKINSVSGYDVVPSETKLKNSMPCDQL 352

Query: 298 KNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHD 356
            N  S+ +GYL ELSNSLL+F NDE  LFMDVDGK++IDKSYYDGL SLLL+SP ++  D
Sbjct: 353 NN--SSPDGYLAELSNSLLDFPNDE-LLFMDVDGKDIIDKSYYDGLNSLLLSSPTDSNQD 409

Query: 357 HLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTE 415
           H+P   EPE SV PD    A    P E+     + S A   +PQFPE  +G++ C LNTE
Sbjct: 410 HVPDITEPEASVGPD----AYLVIPQEA----PMLSTAVDLNPQFPEMCNGVICCALNTE 461

Query: 416 DPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGST 475
           DP+IPCNDD FLPN +  S +S A + +F +A NP SS+VKDF+ NQK            
Sbjct: 462 DPDIPCNDDVFLPNQIPLSPLSSAAQLSFHEANNPTSSAVKDFTDNQK------------ 509

Query: 476 QMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCAR 535
                           +GD  +KFEL   +S+ +A+ ++                L C  
Sbjct: 510 ---------------SIGDCDIKFELTESDSTHMASRSA---------------GLVCG- 538

Query: 536 LKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSH-ERNTNGVKQELDYPAITQESHAL 594
               N +I   + + +  TDS ++KP    +G +S+ + N  G+KQE+D  +  Q   AL
Sbjct: 539 ----NSKIKPARQMSYNSTDSFMEKPVHGFDGFRSYPQTNACGIKQEVDAISTAQNHQAL 594

Query: 595 NVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYEQ 654
           +           +P++NPS+ + E+  +ESDDD +PY SDIEAMILDMDLDPDDQ     
Sbjct: 595 DFAA-------LDPVVNPSSPDQEEQPIESDDD-IPYVSDIEAMILDMDLDPDDQEYCRG 646

Query: 655 EVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATED 714
           EVS+YQ+E+T+RAIIRLEQG HSYMQR I +HGAFA+LYGRHSKHYIKKPEVLLGRATED
Sbjct: 647 EVSRYQYENTKRAIIRLEQGFHSYMQRTIATHGAFAVLYGRHSKHYIKKPEVLLGRATED 706

Query: 715 VVVDIDLGREGRTNKISRRQV 735
           V VDIDLGREG  NKISRRQ 
Sbjct: 707 VTVDIDLGREGCANKISRRQA 727

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538816|ref|XP_002510473.1| conserved hypothetical protein [Ricinus communis] gi|223551174|gb|EEF52660.1| conserved hypothetical protein [Ricinus communis]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/492 (51%), Positives = 326/492 (66%), Gaps = 23/492 (4%)

Query: 261 DNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTN 320
           D ++LP +   K+     YD VHG S LK+++  +E+KN  ++TEGYL ELSNSLLNFTN
Sbjct: 216 DTFSLPCNDDTKNTCLSEYD-VHGESSLKLEIPSEEMKNVNASTEGYLAELSNSLLNFTN 274

Query: 321 DEEFLFMDVDGKEMIDKSYYDGLS-LLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAA 378
           +EE LF DVDGK+ IDKSYYDGLS LLLNSPN+   + +P   EP++S+TPDY+ N   A
Sbjct: 275 EEELLFTDVDGKDAIDKSYYDGLSSLLLNSPNDISQERMPDITEPDSSLTPDYIVNQCGA 334

Query: 379 CPVESVENVQLPSPATV--SDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSV 436
              E  E+    +   +  S+ Q PE    ++ICTLNTEDPEIPCNDD    N+L P S 
Sbjct: 335 SHGELDEDRGSDTGDVIGHSEVQLPELCVEVIICTLNTEDPEIPCNDDIVFTNHLRPKSF 394

Query: 437 SIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQ--VLMQGG---------STQMVGSQVIPG 485
           S   R+NF+D+G   SS+VK+FS N K S+   +L+Q           S+QM+ SQV P 
Sbjct: 395 SSVARRNFQDSGKSNSSTVKEFSNNPKTSEGGPILVQRDVVNPGQSHLSSQMIRSQVKPE 454

Query: 486 SHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAM 545
              HHPVGD G KF+L S + + +  G +  GS +N SM      L  A+ K++  E+  
Sbjct: 455 IGSHHPVGDHGNKFDLPSSSFTHMNKGIAYGGSSKNGSMEI----LVAAKPKEETPEVVP 510

Query: 546 VKDLGHTLTDSSLKKPNFVSNGCKSHER-NTNGVKQELDYPAITQESHALNVEVGSLHIP 604
           VK   H   DSS++KP F  +  K H   +  G+KQ+ D PA  Q     + ++ S    
Sbjct: 511 VKHFNHNSVDSSIEKPVFGPDSYKCHAHTDACGLKQDPDAPARIQNHQPAHAKLVSAENA 570

Query: 605 DAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIY-EQEVSKYQHED 663
            +E ++N   ++PE+P +ESDDD +PYFSDIEAMILDMDLDP+DQ +Y  +EVS+YQHED
Sbjct: 571 ASEQVVNYPVSDPEEPPIESDDD-IPYFSDIEAMILDMDLDPEDQDLYLSEEVSRYQHED 629

Query: 664 TRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGR 723
           T+R I+RLEQGA SYMQRAI   GAFA+LYGR SKHYIKK EVLLGRATEDV+VDIDLGR
Sbjct: 630 TKRVIMRLEQGAQSYMQRAIALQGAFAVLYGRRSKHYIKKSEVLLGRATEDVIVDIDLGR 689

Query: 724 EGRTNKISRRQV 735
           EGR NK+SR+Q 
Sbjct: 690 EGRANKVSRKQA 701

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438524|ref|XP_004137038.1| PREDICTED: uncharacterized protein LOC101220419 [Cucumis sativus] gi|449479124|ref|XP_004155512.1| PREDICTED: uncharacterized LOC101220419 [Cucumis sativus]

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 328/766 (42%), Positives = 439/766 (57%), Gaps = 69/766 (9%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M ++ERS+  LP  F++ GN KE K   GKRK  +VR  YY LR+RI NEPFN +DL FL
Sbjct: 68  MIDFERSS-PLPSKFNKFGNPKETKCIGGKRKYGTVRRRYYTLRRRICNEPFNPMDLGFL 126

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMD-DDASCRDGP 119
             P + N+    +EP S NC+   P ++ FGLQ S L ++   F    M+ DDA      
Sbjct: 127 VGPSDSNY--GVEEPISGNCI--PPTSDGFGLQGSELGILQCNFAQNGMNTDDAE----- 177

Query: 120 TLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVEL----GLPGQVPN 175
             H FH    H  E+ FS       E I HI  E+     N + V E+    G P  V +
Sbjct: 178 --HTFHSECQHTVEKHFSRSLENGQEGISHIMGESLPLSANESHVEEMAPSAGFP--VHS 233

Query: 176 LFEADHMEANPLSTYGQ-TNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPI 234
           LF+ D +E    ST+GQ +ND       LE N VF SP+ D GA F ++E+SSPLP MPI
Sbjct: 234 LFDND-LEVRH-STFGQLSNDQRAMGSELEDNDVFNSPVSDSGASFHNVEYSSPLPGMPI 291

Query: 235 WTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKD---KSAPGYDFVHGNSKLKMQ 291
           W    ++S+P + +D  F +KD+  GD++ LPDD G K+       GYD  H + KLK++
Sbjct: 292 W---RNASAPALPIDVGFADKDMPIGDSFDLPDDDGNKNIQNARLAGYD-AHSDLKLKIE 347

Query: 292 MSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLS-LLLNSP 350
           +  D LK+  +  E    ELSNSLLN +N++E LFMDVDGK++IDKSYYDGLS LLLNSP
Sbjct: 348 VQHDHLKSPNATAEVDFAELSNSLLNLSNEDELLFMDVDGKDVIDKSYYDGLSSLLLNSP 407

Query: 351 NEAKHDHLPSP-EPETSVTPDYLANASAACPVESVE-------------NVQLPSPATVS 396
           NE  HD   +    ET    D L +   AC  +  E             +   PSP+   
Sbjct: 408 NEVNHDQTTTGINAETGWPTDALVDPPTACSGKLYEKESHGGVGHLDCSSEAHPSPSASL 467

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
             Q P + +  + C LNTEDPEIP NDD FLP  L P          F+D+     SS K
Sbjct: 468 GSQCPGKGNEPLFCALNTEDPEIPSNDDVFLPP-LTPMG------SQFQDST---FSSTK 517

Query: 457 DFSGNQKVSDQ---VLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGT 513
           DF+ ++K  +    V  +    Q       P   + H VG + V       N ++L+ G 
Sbjct: 518 DFTYDEKSGETQYLVRERKNHGQPRALHGFPERVEKHLVGGASV-------NLNKLSHGN 570

Query: 514 SCRGSIQNN--SMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSH 571
           S   S  NN  S+N + D++Q    K++N EI+ V  LG    ++ ++KP F S+  + +
Sbjct: 571 SRHLSPVNNISSINVNSDAIQPVVFKEENNEISRVNHLGQNFLNAHVEKPGFDSDNVRRY 630

Query: 572 ERNTN-GVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVP 630
             +   G+KQE D  A T + H L+ E G+  +  AE     ST++ +D      +DD+P
Sbjct: 631 TPSAACGIKQEPDILA-TLKDHRLSQEEGTQGVFCAEQDGISSTSDQDDLLSIDSEDDIP 689

Query: 631 YFSDIEAMILDMDLDPDDQGIYE-QEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAF 689
           +FSDIEAMILDMDLDP+DQ +Y  +EV KYQH +TR++IIRLEQGA++  QR+I SHGA 
Sbjct: 690 HFSDIEAMILDMDLDPEDQELYSSEEVLKYQHVETRKSIIRLEQGANACTQRSIASHGAL 749

Query: 690 AILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQV 735
           A+L+GRHS+H+IKK EVLLGRATEDV+VDIDLGREG  NKISRRQ 
Sbjct: 750 AVLHGRHSRHFIKKSEVLLGRATEDVIVDIDLGREGSGNKISRRQA 795

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509648|ref|XP_003523558.1| PREDICTED: uncharacterized protein LOC100786493 [Glycine max]

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 297/782 (37%), Positives = 412/782 (52%), Gaps = 102/782 (13%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M  +E SA  LP  F R G+ KE K+ S  RK+ESVR+ YYA  KRI N    S+DLSFL
Sbjct: 68  MTNFELSASPLPSKFYRFGHLKERKVVSATRKSESVRNLYYARCKRIRNSMLTSMDLSFL 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
               N N+  +G +P S NCM     +NHF    S+LD     FP+  MDD+ +  D   
Sbjct: 128 VDSENGNYAVHGSDPLSGNCMPEGGTSNHF----SSLDPAQYAFPENLMDDNVA-SDRVA 182

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVE-LGLPGQ--VPNLF 177
              F  G D+  EE+F ++   + +E P IFE+N    G    VVE L +P +  +    
Sbjct: 183 AGVFCHGVDNAVEENFPVELKSVLKEEPQIFEDNVPLDG----VVEDLDVPNELAIDGWI 238

Query: 178 EADHMEANPLSTYGQTNDDAGNIC-TLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWT 236
             D +E  PLST    N+D GN+C   + N VF S + +CG  F      S L EMP+W 
Sbjct: 239 GDDGLERMPLSTLDHINNDPGNMCPEFDENNVFDSEL-ECGTSFN----LSSLHEMPVWR 293

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T           D+S +E +L                                    CD 
Sbjct: 294 T-----------DESIQEHNL-----------------------------------PCDG 307

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
             +  +  + YLEELSNSLL+F+++EE + MDVDG E IDKSY+DGL SLL NS N+   
Sbjct: 308 FNDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGDEGIDKSYFDGLTSLLQNSTNDINS 367

Query: 356 DHLPSPEPETSVTPD--YLANASAACPVESVEN---------------VQLPSPATVSDP 398
           D +   +   S+     ++ N S +C  E  +N                Q+ S  + +DP
Sbjct: 368 DQISKKDETESLMASQAHVINQSVSCHKELDDNSGSSSRGLQVVHKLEFQMSSSVSTTDP 427

Query: 399 QFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDF 458
           QFPE  +  M C++NTE  EIP NDD FLP ++ P     + +  FK +  P SSSV   
Sbjct: 428 QFPELINESMPCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKH 487

Query: 459 SGNQKVSDQVLMQGG-------STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAA 511
             +++    + ++         S QM+ S   PG     PVG S VK EL + +++   +
Sbjct: 488 RASERGKTLMHVEKKNPAAPYVSFQMMESPCFPG-----PVGGSKVKCELPANHAAHTVS 542

Query: 512 GTS--CRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCK 569
            +S    G +  N    + D+L  A  K++   I + KD  + + +S +KK    S   +
Sbjct: 543 RSSVIVSGGLGGNDAANTTDALLHANKKEEATSICLAKDPSNHVANSFMKKSAADSKDFR 602

Query: 570 SHER-NTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDD 628
           +H + N + +K E D P   Q+      E+GS  + ++E + NP   + E+  +ES DD+
Sbjct: 603 NHPQPNGSSMKNEQDLPLPLQDHQLQRAELGSSDVLESELVANPPALDEEEQYIES-DDE 661

Query: 629 VPYFSDIEAMILDMDLDPDDQ--GIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSH 686
           +P +SD+EAM+LDMDLDP D     Y +EVS+YQH +++RAI+RLEQG+HS +QRAI SH
Sbjct: 662 LPSYSDVEAMVLDMDLDPHDHQDSYYNEEVSRYQHVESKRAIMRLEQGSHSCIQRAIDSH 721

Query: 687 GAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--SLF 744
           GAFAILY RHSKHYIKKPEVLLGRATE V VDIDLG+ G  N ISRRQ      K  + +
Sbjct: 722 GAFAILYSRHSKHYIKKPEVLLGRATESVPVDIDLGKGGHGNAISRRQAIIKMAKDGTFY 781

Query: 745 IK 746
           IK
Sbjct: 782 IK 783

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466877|ref|XP_003603723.1| Microspherule protein [Medicago truncatula] gi|355492771|gb|AES73974.1| Microspherule protein [Medicago truncatula]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 290/808 (35%), Positives = 404/808 (50%), Gaps = 145/808 (17%)

Query: 3   EYERSALTLPKVFSRAGNSK-EIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLN 61
           ++E S   LP  F +  + K E K  S KRK  +VR+ YYA+RKRI  +   S+D +FL 
Sbjct: 73  DFEHSVSPLPSKFFKIEHLKDEQKDVSVKRKVHTVRNSYYAMRKRIRRDMQTSMDYNFLV 132

Query: 62  APGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTL 121
              N N+  NG+EP   NC+L    +N F    SN D  H   P+  MD D     G   
Sbjct: 133 DSENDNYAVNGNEPLPENCVLEGSTSNDF----SNHDPSHYGLPENFMDVDI----GVAA 184

Query: 122 HRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARV---VELGLPGQVPNLFE 178
             F+ G D   EE+F M Q  + EE P I E+N    G        +EL     +     
Sbjct: 185 QAFYTGVDDTLEENFPMDQNNISEEEPQIHEDNVLLNGTAEEFGDSIEL----DIEKFIG 240

Query: 179 ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSP-LPEMPIWT 236
            D ++    S + Q N+D  N+C+  + + +F SP  +CG  F DLE S P + +MP+W 
Sbjct: 241 DDELDDMSFSAFHQINNDPANLCSEFDEDYMFDSPELECGNSFDDLELSLPDIQDMPVWR 300

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T E  + P                                                 CD 
Sbjct: 301 TEEQDNIP-------------------------------------------------CDG 311

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
            K+  +  +GYLEELSNSLLNFT +EE   MD  GK+ I KSYYDGL SLLLNSP +   
Sbjct: 312 SKDSIACEDGYLEELSNSLLNFTGEEELFLMDSVGKDGIGKSYYDGLSSLLLNSPIDGCS 371

Query: 356 DHLP-SPEPETSVTP-DYLANASAACPVESVENV-------------------------- 387
           + +P + E E  +TP + + N S +C  E  +N                           
Sbjct: 372 NQIPETAEVELLLTPHEDVKNPSVSCRTEVDDNAGKAETELLAAFDAHVKGMSVSCRAEV 431

Query: 388 -------------------QLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLP 428
                              Q+ + A+  DPQFPE  +G++ C +NTEDPE+P NDD FLP
Sbjct: 432 DDNTMSQSNGMEVVQKPEFQMAASASAKDPQFPELINGVVPCIINTEDPEVPSNDDVFLP 491

Query: 429 NNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHK 488
            N  P ++S +     +          K   G Q           S+Q  G+  +PG   
Sbjct: 492 FNEPPPTISCSSESASRRGKVLMQVEQKSSVGAQV----------SSQTTGAHCLPG--- 538

Query: 489 HHPVGDSGVKFEL------HSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKE 542
             PV  S +K+EL      H  + + + A +   G+  N++ N +  +L  A  K+   +
Sbjct: 539 --PVSGSKIKYELSNNHASHRLSRNAIIASSDLGGN--NDATNKTHAALH-ASPKEKPVD 593

Query: 543 IAMVKDLGHTLTDSSLKKPNFVSNGCKSH-ERNTNGVKQELDYPAITQESHALNVEVGSL 601
           ++ VK   + +T+ S KKP  + NG ++H + N + +KQE D     + +   + EVGS 
Sbjct: 594 VSFVKHQSNNVTNLSHKKPA-LGNGLRNHGQPNGSSLKQERDVALPVENNQLQHAEVGSA 652

Query: 602 HIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYE-QEVSKYQ 660
            +   E ++     + E+  +ES DD+VPY+SD+EAM+LDMDL+PDD  +Y+ +EVS+YQ
Sbjct: 653 DVLGPEMVVYSERLDEEEQYIES-DDEVPYYSDVEAMVLDMDLEPDDHDLYDNEEVSRYQ 711

Query: 661 HEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDID 720
           HE+T+RAIIRLEQGAHSYMQRA+ SHGA A+LYGRHSK+YIKK EVL+GR+TE   VDID
Sbjct: 712 HEETKRAIIRLEQGAHSYMQRAMASHGALALLYGRHSKYYIKKTEVLVGRSTEGFHVDID 771

Query: 721 LGREGRTNKISRRQVYNVFVK--SLFIK 746
           LG+ G  N ISRRQ      K  S FIK
Sbjct: 772 LGKGGCANLISRRQAIIKMDKDGSFFIK 799

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518000|ref|XP_003527672.1| PREDICTED: uncharacterized protein LOC100803683 [Glycine max]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 294/784 (37%), Positives = 405/784 (51%), Gaps = 106/784 (13%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M   E SAL LP  F R G+SKE K+ S  RK++SVR+ YYA RKRI N    S+DLSFL
Sbjct: 68  MTNLELSALPLPSKFYRFGHSKERKVVSATRKSDSVRNLYYARRKRIRNSMLTSMDLSFL 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
               N N+  +G +P S NCM     +NHF    S+LD     FP+  MDD+ +  D   
Sbjct: 128 VDSENGNYAAHGSDPLSGNCMPEGGTSNHF----SSLDPSQYAFPENVMDDNVAS-DRVA 182

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVE-LGLPGQ--VPNLF 177
              F  G D    E+F  +   + +E P IFE N    G    VVE L +P +  +    
Sbjct: 183 AGVFCHGVDKAVAENFPAKLKSVLKEEPQIFEGNMPLDG----VVEDLDVPNELAIDGWI 238

Query: 178 EADHMEANPLSTYGQTNDDAGNIC-TLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWT 236
             D +E  PLS     N+D GN+C   + N VF S + +CG  F      S  PEM +W 
Sbjct: 239 GDDGLERMPLSALNHINNDPGNMCPEFDENNVFDSEL-ECGTSFN----LSSRPEMSVWG 293

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T           D+S +E DL                                    CD 
Sbjct: 294 T-----------DESIQEHDL-----------------------------------PCDG 307

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
             +  +  + YLEELSNSLL+F+++EE + MDVDG+E I+KSY+ GL SLL NS N+   
Sbjct: 308 FSDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGEEGIEKSYFGGLTSLLQNSTNDVNS 367

Query: 356 DHLPSPEPETSVTPD--YLANASAACPVESVENV---------------QLPSPATVSDP 398
           D +   +   S+     ++ N S +C  E  +N+               Q+ S    +DP
Sbjct: 368 DQISEKDETESLMASQAHVINQSVSCHKELDDNLGSSSSGLQVVPKLEFQMSSSVAATDP 427

Query: 399 QFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDF 458
           QFP+  +  M C++NTE  EIP NDD FLP ++ P     + +  FK +  P SSSV   
Sbjct: 428 QFPDLINESMSCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKH 487

Query: 459 SGNQKVSDQVLMQ---------GGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQL 509
             +++   + LM            S QM+ S   PG     PVG S V+ EL + ++   
Sbjct: 488 RDSER--GKTLMHVEKKDSVESHASFQMMESPCFPG-----PVGGSKVECELPANHAPHT 540

Query: 510 AAGTS--CRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNG 567
            + +S    G +  N    + D+   A  K++   + + KD  + + +S +KK    S  
Sbjct: 541 VSRSSVTVSGGLGGNEAANTTDAFLHANKKEEATNVGLAKDPNNHVANSFMKKSAVDSKD 600

Query: 568 CKSHER-NTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
            ++H + N   +K E D     Q+      E+GS  + ++E + NP T + E+  +ES D
Sbjct: 601 FRNHPQPNGFSMKTEQDLALPLQDYQLQRAELGSSDVLESELVANPPTLDEEEQYIES-D 659

Query: 627 DDVPYFSDIEAMILDMDLDPDDQ--GIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAIL 684
           +++P +SD+EAM+LDMDLDPDD     Y +EVS+YQH +++RAI+RLE GAHS +QRAI 
Sbjct: 660 EELPSYSDVEAMLLDMDLDPDDHQDSYYNEEVSRYQHVESKRAIMRLELGAHSCIQRAID 719

Query: 685 SHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--S 742
           SHGAFAILY RHSKHYIKKPEVLLGRATE V VDIDLG+ G  N ISRRQ      K  S
Sbjct: 720 SHGAFAILYSRHSKHYIKKPEVLLGRATEGVPVDIDLGKGGHGNAISRRQAIIKMDKDGS 779

Query: 743 LFIK 746
            +IK
Sbjct: 780 FYIK 783

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735058|emb|CBI17420.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 373/768 (48%), Gaps = 134/768 (17%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M ++E SA       +R+GN KE     GKRK ES+R  Y+A+RKRIHN P  + D    
Sbjct: 70  MVQFEPSASNYSFKSNRSGNCKENVEVLGKRKVESIRRKYHAMRKRIHNVP--NADGYMC 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
           N  G        +EPP  +  LGD + +HFGLQD           ++P D          
Sbjct: 128 NGGGCEEHIVLDNEPPVGSYALGDRVLSHFGLQD-----------NVPQD---------- 166

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEAD 180
                                     IPHI  +N    GN +   + GLP +  NLF  +
Sbjct: 167 --------------------------IPHIIGDNLVDFGNCSGFEDRGLPDR--NLFNNN 198

Query: 181 HMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVE 239
             E  PLST    N + GN+ +   G Q   SP+ D  A    + F SPLP +P+W T+E
Sbjct: 199 DFERKPLSTLDSLNTNLGNVGSEFGGGQHCESPVSDGSASLHQMGFPSPLPRVPLWKTIE 258

Query: 240 DSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKN 299
           D S+P + ++ +  ++ + + +   L   +      + GY  VH    LK   +C  L N
Sbjct: 259 DISAPVMPINVNLGDRTVSAEETLTLAAAADGNKPCSSGY-AVHSQPTLKD--TCVGLNN 315

Query: 300 EASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHDHL 358
             + T+G   +LS+SLLNF+++ E LFM+ DGK+ +DKS  D L S+LL+SPNE   D +
Sbjct: 316 STAITDGEFADLSDSLLNFSDENELLFMEADGKDPMDKSCLDNLDSVLLSSPNEVHVDDM 375

Query: 359 PS-PEPETSVTPDYLANASAACPVESV-----------------ENVQLPSPATVSDPQF 400
            +  +PET ++   +    +ACP E V                   V +PS   +S+P  
Sbjct: 376 ANISDPETLISGTSIVIHGSACPAELVVSADPLQSSHSNQEGVHSEVTMPSSTLISNPHS 435

Query: 401 PEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNP-FSSSVKDFS 459
            E  +G+M CTLNTED EIP NDD FLP     ++  I     F++A  P FSS +    
Sbjct: 436 SELQEGVMYCTLNTEDSEIPYNDDNFLPATFASTTQPI-----FEEACEPAFSSDI---- 486

Query: 460 GNQKVSDQV--LMQG--------GSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQL 509
             QK S+Q   LM           + QM+G   +P     H     G + EL        
Sbjct: 487 --QKDSEQAPSLMNKDKNPAPSFKAPQMIGKDRMPEIVPDHQFIGYGNRSEL-------- 536

Query: 510 AAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCK 569
            +G +C                  A   +    I +V     +   S+   PN V +G  
Sbjct: 537 -SGDNC-----------------LATASRHFNSIPVVP----SHHSSAHATPNSVMDGAP 574

Query: 570 SHERNTNGVK-QELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDD 628
              R    VK +E + P    E   L+   GS  +   EPI +  + + E  S    DDD
Sbjct: 575 G--RGVLNVKSREKEAPGTYGEHLFLHAGSGSTKMNFLEPINSLMSDQEESES----DDD 628

Query: 629 VPYFSDIEAMILDMDLDPDDQGIY-EQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHG 687
           VPYFSDIEAMIL+MDL P+DQ  Y   +VS+YQHED R+ IIRLEQ A S MQRAI S  
Sbjct: 629 VPYFSDIEAMILEMDLCPEDQDSYIGSKVSRYQHEDARKVIIRLEQCAQSSMQRAIASQC 688

Query: 688 AFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQV 735
           A AI YGRH KHYIKK EV+LGRAT ++ VDIDL +EGR NKISRRQ 
Sbjct: 689 ALAIFYGRHLKHYIKKAEVILGRATNEIDVDIDLSKEGRANKISRRQA 736

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082944|ref|XP_002306902.1| predicted protein [Populus trichocarpa] gi|222856351|gb|EEE93898.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 220/477 (46%), Positives = 285/477 (59%), Gaps = 49/477 (10%)

Query: 279 YDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKS 338
           YD +H +SKL+M+M  D  +N + +TE +L EL+N L   +NDEE   +DVDGK+     
Sbjct: 228 YDDLHEDSKLQMEMLTDVPQNSSHSTEDFLAELTNYL---SNDEEGSGVDVDGKDFSTDP 284

Query: 339 YYDGL-SLLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVS 396
           Y   L ++LL+SPN     H+PS  EPE+S++ D+   +  +  V     +Q  S  +V 
Sbjct: 285 YIACLNTILLSSPNSENEKHMPSVTEPESSISADW---SHYSVDVVCNSEMQFVSSTSVL 341

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
           DP  PE  DG++ C LN+ED EIPCN D   P    PSS +    ++ +DAG P S  VK
Sbjct: 342 DPH-PEVKDGVICCVLNSEDTEIPCNGDILFPTEWHPSSAASLASRSSQDAGKPNSLFVK 400

Query: 457 DFSGNQKVSDQVLMQ---------GGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSS 507
           +   N+K    V++            S+QM   QV+P     HP GD  +KFEL S  ++
Sbjct: 401 ELISNKKSGVPVVVHRDLDNPRQPRASSQMTRLQVMPERGLLHPAGDHVLKFELPSSEAT 460

Query: 508 -QLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSN 566
            +  AG S  GS Q NS +T  ++L                            K +FVS+
Sbjct: 461 HRGGAGFSSGGSTQFNSADTEMETL----------------------------KLDFVSD 492

Query: 567 GCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
                + N + VKQ  D PA  Q   A +++VGS  I  +E + N S ++P +P ++S D
Sbjct: 493 CFTYPQTNVSAVKQAEDAPAGVQNHQASHMKVGSSDIAASELVENHSISDPAEPPIQS-D 551

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIY-EQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILS 685
           DDVPYFSDIEAMILDMDLDP DQ +Y  +EVS+YQHED +RAIIRLEQGA SYMQR+I S
Sbjct: 552 DDVPYFSDIEAMILDMDLDPQDQDLYCSEEVSRYQHEDMKRAIIRLEQGARSYMQRSIAS 611

Query: 686 HGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS 742
           HGAFA++YGRHSKHYIKKPEVLLGRATEDV VDIDLGREGR NKISRRQ      KS
Sbjct: 612 HGAFAVMYGRHSKHYIKKPEVLLGRATEDVTVDIDLGREGRANKISRRQATIYLDKS 668

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066050|ref|XP_002302003.1| predicted protein [Populus trichocarpa] gi|222843729|gb|EEE81276.1| predicted protein [Populus trichocarpa]

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 270/469 (57%), Gaps = 54/469 (11%)

Query: 279 YDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKS 338
           +D +  +S+LKM++  D  +N + +TE +L EL+N L   +NDEE   +D+DGK+    S
Sbjct: 227 FDDLQKDSELKMEILSDVPQNSSHSTEDFLAELTNYL---SNDEEGASVDMDGKDFSTNS 283

Query: 339 YYDGL-SLLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVS 396
           Y   L ++LL+SPN +  +H P+  EPE S++ D   N S ACP    EN    S  +V 
Sbjct: 284 YIACLNTILLDSPNNSNENHRPNVTEPEASISADCSKNHSGACPGNLWEN--RGSHCSVD 341

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
               PE  DGI+ C LNTED EIP NDD  LP +  P SV+   ++NF+ AG P S S K
Sbjct: 342 ADPHPEVKDGIICCVLNTEDTEIPFNDDIDLPTDWRPRSVTSLVQRNFQHAGKPNSLSAK 401

Query: 457 DFSGNQ------KVSDQVLMQGG----STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNS 506
           +   N+       V+ + L   G    S+QMV  Q +P     HPVGD  +K EL S +S
Sbjct: 402 ELPSNKIGSVVSVVAHRDLENPGQLLASSQMVRLQAMPEPGPVHPVGDHSLKLELPSSDS 461

Query: 507 SQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSN 566
           ++ +AG +  GS Q NS +T  ++L   +LK++  E  M K + +   DS L+KP+ VS+
Sbjct: 462 TRRSAGFAFGGSTQFNSADTKMETLVPTKLKEETTETPMAKHMSNESADSLLEKPSLVSD 521

Query: 567 GCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
                + N + +KQ  D P   Q                             +  V   D
Sbjct: 522 FFTYPQTNVSAIKQVEDAPDRVQ-----------------------------NHQVSHSD 552

Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSH 686
           DDVPYFSDIEAM+    +  D        VS+Y+HEDT+RAI+RLEQGAHSYMQRAI  H
Sbjct: 553 DDVPYFSDIEAMVTVYCIQTD--------VSRYRHEDTKRAIMRLEQGAHSYMQRAIARH 604

Query: 687 GAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQV 735
           GAFA+++GRHSKHYIKK EVLLGRATED +VDIDLGREGR N ISRRQ 
Sbjct: 605 GAFAVIHGRHSKHYIKKSEVLLGRATEDAIVDIDLGREGRRNIISRRQA 653

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	753
TAIR|locus:2096174	702	emb1967 "AT3G54350" [Arabidops	0.438	0.470	0.415	2.8e-82
TAIR|locus:2005644	555	AT1G75530 "AT1G75530" [Arabido	0.135	0.183	0.650	8e-31
TAIR|locus:2036621	525	AT1G60700 "AT1G60700" [Arabido	0.131	0.188	0.456	4.8e-13
UNIPROTKB|E2R2M5	271	MCRS1 "Uncharacterized protein	0.134	0.372	0.345	4.3e-05
RGD|1311607	462	Mcrs1 "microspherule protein 1	0.134	0.218	0.345	5.9e-05
UNIPROTKB|Q7Z372	271	DKFZp686N07218 "Putative uncha	0.134	0.372	0.345	7.2e-05
MGI|MGI:1858420	462	Mcrs1 "microspherule protein 1	0.134	0.218	0.353	9.8e-05
UNIPROTKB|Q08E44	462	MCRS1 "Uncharacterized protein	0.134	0.218	0.345	0.00013
UNIPROTKB|G3V9E0	462	Mcrs1 "Protein Mcrs1" [Rattus	0.134	0.218	0.345	0.00013
UNIPROTKB|H9KYV0	458	MCRS1 "Uncharacterized protein	0.135	0.222	0.330	0.00016

TAIR|locus:2096174 emb1967 "AT3G54350" [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 2.8e-82, Sum P(3) = 2.8e-82
 Identities = 148/356 (41%), Positives = 205/356 (57%)

Query:   385 ENVQLPSPATVS-DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQN 443
             ++V L    T++ DP  PE   G++ C LN EDP+IPCNDD FL NN  P SVS   R+N
Sbjct:   298 DHVMLELDGTIALDPH-PEIVGGVICCLLNEEDPDIPCNDDIFLSNNSRPMSVSSLARRN 356

Query:   444 FKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHP-VGDSGVKFELH 502
             FKD  +P ++ V+D S +++ S+   +Q    +  G   + GS +  P +G      +  
Sbjct:   357 FKDTNSPITTCVRDVSASKEKSEGYSLQA-QKKKPGR--LQGSTQGKPEMGQPSKGSKFR 413

Query:   503 SCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPN 562
             +  S++L    +  GS  +++   S   L      +D K+         T T +      
Sbjct:   414 ASTSTELKNTVAPGGS--SSAQACSNTLLSTGTGAKDGKK--------ETATGTL----- 458

Query:   563 FV-SNGCKSH-ERNTNGVKQELDYPAITQESHALNVEVGSLHI--PDAEPIMNPSTTXXX 618
             FV S+G  +H E+++   K++   P + +  HA + + G + I  P+ E I         
Sbjct:   459 FVGSDGHGNHPEKDSENCKEKNVVPPVNESPHAKDTDDGLIEITVPELE-ITRAEAEAEA 517

Query:   619 XXXXXXXXXXXXYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY 678
                          +SDIEAMILDMDL+PDDQ  ++ EVSKYQ +D +R IIRLEQ AHSY
Sbjct:   518 EAHVCESDEDLPNYSDIEAMILDMDLEPDDQDNFDLEVSKYQSQDMKRTIIRLEQAAHSY 577

Query:   679 MQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
             MQRAI S GAFA+LYGR+SKHYIKKPEVL+GR+TED+ VDIDLGRE R +KISRRQ
Sbjct:   578 MQRAIASRGAFAVLYGRYSKHYIKKPEVLVGRSTEDLAVDIDLGREKRGSKISRRQ 633

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0006312 "mitotic recombination" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

GO:0016246 "RNA interference" evidence=RCA

TAIR|locus:2005644 AT1G75530 "AT1G75530" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
 Identities = 67/103 (65%), Positives = 78/103 (75%)

Query:   632 FSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAI 691
             FSD+EAMILDMDL+P  Q  YE + SKY++E+  R I+RLEQ A SYM R I +HGAFA+
Sbjct:   387 FSDLEAMILDMDLEPIGQDQYELDASKYRNEEMARKIMRLEQSAESYMNRDIAAHGAFAL 446

Query:   692 LYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
             LYG  SKHYI KPEVLLGRAT +  VDIDLGR G   + SRRQ
Sbjct:   447 LYGS-SKHYINKPEVLLGRATGEYPVDIDLGRSGSETRFSRRQ 488

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2036621 AT1G60700 "AT1G60700" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 4.8e-13, P = 4.8e-13
 Identities = 47/103 (45%), Positives = 68/103 (66%)

Query:   634 DIEAMILDMDLDPDDQG--IYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAI 691
             DI+AMI  ++L PDD       +E +  +H   R A+I LEQ   + MQRAI+ HGA A+
Sbjct:   345 DIDAMIRKLNLVPDDSDSCFNREEWNMSKHP--RHALIGLEQCTRTSMQRAIMFHGAIAV 402

Query:   692 LYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
             L+   SKH+++K EV++GR++  + VDIDLG+    +KISRRQ
Sbjct:   403 LHCPDSKHFVRKREVIIGRSSGGLNVDIDLGKYNYGSKISRRQ 445

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2R2M5 MCRS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 39/113 (34%), Positives = 58/113 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQR 681
             FSD E +I D  L D  D+ + E E++       +R I +LEQ  H +         M  
Sbjct:    90 FSDAEDLIDDSKLKDMRDE-VLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMSS 147

Query:   682 AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                 +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   148 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 200

GO:0071339 "MLL1 complex" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

RGD|1311607 Mcrs1 "microspherule protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 39/113 (34%), Positives = 59/113 (52%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQR 681
             FSD E +I D +L D  D+ + E E++       +R I +LEQ  H +         M  
Sbjct:   281 FSDAEDLIDDSELKDMRDE-VLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMSS 338

Query:   682 AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                 +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   339 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

GO:0000123 "histone acetyltransferase complex" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0031011 "Ino80 complex" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO

GO:0043982 "histone H4-K8 acetylation" evidence=ISO

GO:0043984 "histone H4-K16 acetylation" evidence=ISO

GO:0071339 "MLL1 complex" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=ISO

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=ISO

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=ISO

UNIPROTKB|Q7Z372 DKFZp686N07218 "Putative uncharacterized protein DKFZp686N07218" [Homo sapiens (taxid:9606)]

 Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 39/113 (34%), Positives = 57/113 (50%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQR 681
             FSD E +I D  L D  D+ + E E+        +R I +LEQ  H +         M  
Sbjct:    90 FSDAEDLIDDSKLKDMRDE-VLEHELMVADRRQ-KREIRQLEQELHKWQVLVDSITGMSS 147

Query:   682 AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                 +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   148 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 200

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1858420 Mcrs1 "microspherule protein 1" [Mus musculus (taxid:10090)]

 Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 40/113 (35%), Positives = 61/113 (53%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY--MQRAILSHGA 688
             FSD E +I D  L D  D+ + E E++       +R I +LEQ  H +  +  +I   G+
Sbjct:   281 FSDAEDLIDDSKLKDMRDE-VLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMGS 338

Query:   689 -------FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                     A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   339 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

GO:0000123 "histone acetyltransferase complex" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0031011 "Ino80 complex" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO

GO:0043982 "histone H4-K8 acetylation" evidence=ISO

GO:0043984 "histone H4-K16 acetylation" evidence=ISO

GO:0071339 "MLL1 complex" evidence=ISO

UNIPROTKB|Q08E44 MCRS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
 Identities = 39/113 (34%), Positives = 58/113 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQR 681
             FSD E +I D  L D  D+ + E E++       +R I +LEQ  H +         M  
Sbjct:   281 FSDAEDLIDDSKLKDMRDE-VLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMSS 338

Query:   682 AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                 +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   339 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

GO:0071339 "MLL1 complex" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

UNIPROTKB|G3V9E0 Mcrs1 "Protein Mcrs1" [Rattus norvegicus (taxid:10116)]

 Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
 Identities = 39/113 (34%), Positives = 58/113 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQR 681
             FSD E +I D  L D  D+ + E E++       +R I +LEQ  H +         M  
Sbjct:   281 FSDAEDLIDDSKLKDMRDE-VLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMSS 338

Query:   682 AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                 +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   339 PDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQ 391

GO:0000123 "histone acetyltransferase complex" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0071339 "MLL1 complex" evidence=IEA

UNIPROTKB|H9KYV0 MCRS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
 Identities = 37/112 (33%), Positives = 54/112 (48%)

Query:   632 FSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY---------MQRA 682
             FSD E M+ D  L      + E E++       +R I +LEQ  H +         M   
Sbjct:   277 FSDAEDMLDDSKLKDVRDDVLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSITGMNSP 335

Query:   683 ILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQ 734
                    A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q
Sbjct:   336 DFDSQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLALEGPAWKISRKQ 387

GO:0000123 "histone acetyltransferase complex" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0071339 "MLL1 complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.V.1595.1 hypothetical protein (725 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	753
KOG2293	547	consensus Daxx-interacting protein MSP58/p78, cont	100.0
PF13325	199	MCRS_N: N-terminal region of micro-spherule protei	99.17
cd00060	102	FHA Forkhead associated domain (FHA); found in euk	96.76
KOG2293	547	consensus Daxx-interacting protein MSP58/p78, cont	95.98
PF00498	68	FHA: FHA domain; InterPro: IPR000253 The forkhead-	95.57
COG5025	610	Transcription factor of the Forkhead/HNF3 family [	94.95
smart00240	52	FHA Forkhead associated domain. Found in eukaryoti	94.65
TIGR03354	396	VI_FHA type VI secretion system FHA domain protein	85.53
COG1716	191	FOG: FHA domain [Signal transduction mechanisms]	82.36

>KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-36  Score=327.45  Aligned_cols=121  Identities=60%  Similarity=0.886  Sum_probs=111.3

Q ss_pred             CCCCCcchHHHHhhcCCCCCCChhhhhHhhhhcccHHHHHHHHHHHhhHHHHHHHHhccCCceEEEEecceeEeeecCeE
Q 004452          627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEV  706 (753)
Q Consensus       627 d~vpsFSDaE~~Ild~dL~p~Dq~~~~~Elsr~q~~~~kr~I~rLE~e~~~~~~~~~~~~~alAvL~G~~~~y~mr~~eI  706 (753)
                      ++++  ||+|+||+|+||.|.||+....|.+.++.+..++.|.||||...+||||+|+.+||||||||++++||||++||
T Consensus       373 E~Le--~diEami~D~dl~p~~qd~r~le~e~~r~~~l~~~iirleqs~~~~mqrai~~hgAiAvL~Gr~skh~mrk~EV  450 (547)
T KOG2293|consen  373 EELE--SDIEAMILDMDLEPDDQDIRSLEAEKSRSQVLVRSIIRLEQSAESYMQRAIAFHGAIAVLYGRFSKHYMRKKEV  450 (547)
T ss_pred             cccc--chHHHHHhhcccCCcchHHHHHHHHHhhhHHHHHHhhhhhhcccchhhhhhhhcceeEEEechhhHhhhcCcce
Confidence            4556  99999999999999999943444444677888999999999999999999999999999999999999999999


Q ss_pred             EEccCCCCCccceecCCCCCCccccccceEEeeccc--eeEE-ecc
Q 004452          707 LLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS--LFIK-IGH  749 (753)
Q Consensus       707 viGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d--FyI~-ig~  749 (753)
                      +|||+|.+++|||||++||||+|||||||+|||.++  |+|+ .|.
T Consensus       451 tlGRat~d~~VDIDLgkegpatKISRRQa~IkL~n~GsF~IkNlGK  496 (547)
T KOG2293|consen  451 TLGRATGDLKVDIDLGKEGPATKISRRQALIKLKNDGSFFIKNLGK  496 (547)
T ss_pred             EeeccCCCcceeeeccccCccceeeccceeEEeccCCcEEeccCcc
Confidence            999999999999999999999999999999999988  9999 653

>PF13325 MCRS_N: N-terminal region of micro-spherule protein

Probab=99.17  E-value=1.8e-11  Score=123.06  Aligned_cols=71  Identities=27%  Similarity=0.360  Sum_probs=64.8

Q ss_pred             CCCccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhcCCC-CCCChhhhhHhhhhcccHHHHHHHHHHHhhHHHH
Q 004452          606 AEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDL-DPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY  678 (753)
Q Consensus       606 ~~~~~y~ll~DQ~~~~~~~~~d~vpsFSDaE~~Ild~dL-~p~Dq~~~~~Elsr~q~~~~kr~I~rLE~e~~~~  678 (753)
                      +.|++|+||+||.+++.+..++.+++|||+|++|+|.+| .|+|+. +++|+. +++|++||+||+||+|+.+|
T Consensus       123 ~lmkqy~LL~DQ~v~~~~~~~~~~~sfsDaEd~i~d~~l~~~~de~-l~~el~-~~dr~~k~~ir~lE~el~~w  194 (199)
T PF13325_consen  123 RLMKQYHLLPDQSVQPLPKQDDQVLSFSDAEDLIDDSELKDPRDEA-LEHELE-LADRRQKREIRQLENELSRW  194 (199)
T ss_pred             HHHHHhchhhccccCCCCCCCccccccccHHHHhhccccccCcccc-cchhhh-HHhHHHHHHHHHHHHHhhhh
Confidence            479999999999999998874589999999999999999 477875 499997 79999999999999999999

>cd00060 FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins

Probab=96.76  E-value=0.0045  Score=53.07  Aligned_cols=52  Identities=21%  Similarity=0.402  Sum_probs=43.1

Q ss_pred             eEEEEe--cceeEeeec-CeEEEccCCCCCccceecCCCCCCccccccceEEeecc-c-eeEE
Q 004452          689 FAILYG--RHSKHYIKK-PEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK-S-LFIK  746 (753)
Q Consensus       689 lAvL~G--~~~~y~mr~-~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-d-FyI~  746 (753)
                      |.++.|  ...+|.|+. .+++|||+...  +||-|.    ...|||+||+|++.. . +|+.
T Consensus         4 L~~~~~~~~~~~~~l~~~~~~~iGr~~~~--~~i~l~----~~~iS~~H~~i~~~~~~~~~~~   60 (102)
T cd00060           4 LVVLSGDASGRRYYLDPGGTYTIGRDSDN--CDIVLD----DPSVSRRHAVIRYDGDGGVVLI   60 (102)
T ss_pred             EEEecCCCceeEEEECCCCeEEECcCCCc--CCEEcC----CCCeeCcceEEEEcCCCCEEEE
Confidence            566666  788999999 99999999987  677774    789999999999998 4 5554

Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).

>KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms]

Probab=95.98  E-value=0.0036  Score=71.30  Aligned_cols=106  Identities=18%  Similarity=0.202  Sum_probs=84.2

Q ss_pred             CCCccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhcCCC-CCCChhh-hhHhhhhcccHHHH---HHHHHHHhhHHHH--
Q 004452          606 AEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDL-DPDDQGI-YEQEVSKYQHEDTR---RAIIRLEQGAHSY--  678 (753)
Q Consensus       606 ~~~~~y~ll~DQ~~~~~~~~~d~vpsFSDaE~~Ild~dL-~p~Dq~~-~~~Elsr~q~~~~k---r~I~rLE~e~~~~--  678 (753)
                      +.|++|+++++|+++|.... |+ ++|+++|+.+....+ .+.|+++ .+.|.+ ..|++.+   +.|+.||+++.+|  
T Consensus       331 ~l~k~~s~~e~~~v~p~~~s-d~-l~~~~ae~q~~~~~~~~e~DE~Le~diEam-i~D~dl~p~~qd~r~le~e~~r~~~  407 (547)
T KOG2293|consen  331 QLMKQYSCLEDQEVTPQNES-DH-LRRIDAEDQIQGENYNEESDEELESDIEAM-ILDMDLEPDDQDIRSLEAEKSRSQV  407 (547)
T ss_pred             hhhhhcccccccccccccCC-cc-cccccchhccchhhhcccccccccchHHHH-HhhcccCCcchHHHHHHHHHhhhHH
Confidence            47899999999999999877 55 999999999998888 5888874 346775 6899999   9999999999999  


Q ss_pred             HHHHhccCCceEEEEecceeEeee-------cCeEEEccCCCC--Cccceec
Q 004452          679 MQRAILSHGAFAILYGRHSKHYIK-------KPEVLLGRATED--VVVDIDL  721 (753)
Q Consensus       679 ~~~~~~~~~alAvL~G~~~~y~mr-------~~eIviGR~T~~--~~VDIDL  721 (753)
                      |.++++...       .-..+||+       .-.|+-||-++.  .+--|=|
T Consensus       408 l~~~iirle-------qs~~~~mqrai~~hgAiAvL~Gr~skh~mrk~EVtl  452 (547)
T KOG2293|consen  408 LVRSIIRLE-------QSAESYMQRAIAFHGAIAVLYGRFSKHYMRKKEVTL  452 (547)
T ss_pred             HHHHhhhhh-------hcccchhhhhhhhcceeEEEechhhHhhhcCcceEe
Confidence            777775522       23467888       788999997774  3344444

>PF00498 FHA: FHA domain; InterPro: IPR000253 The forkhead-associated (FHA) domain [] is a phosphopeptide recognition domain found in many regulatory proteins

Probab=95.57  E-value=0.021  Score=46.94  Aligned_cols=35  Identities=34%  Similarity=0.429  Sum_probs=27.9

Q ss_pred             EEEccCCCCCccceecCCCCCCccccccceEEeeccc--eeEEe
Q 004452          706 VLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS--LFIKI  747 (753)
Q Consensus       706 IviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d--FyI~i  747 (753)
                      ++|||+   ...||-|.    ...|||+||.|.+..+  |||+-
T Consensus         1 ~~iGR~---~~~di~l~----~~~iSr~Ha~i~~~~~~~~~i~d   37 (68)
T PF00498_consen    1 VTIGRS---PDCDIVLP----DPSISRRHARISFDDDGQFYIED   37 (68)
T ss_dssp             EEEESS---TTSSEEET----STTSSTTSEEEEEETTEEEEEEE
T ss_pred             CEEcCC---CCCCEEEC----CHheeeeeeEEEEeceeeEEEEe
Confidence            689999   34555553    4679999999999988  99993

It displays specificity for phosphothreonine-containing epitopes but will also recognise phosphotyrosine with relatively high affinity. It spans approximately 80-100 amino acid residues folded into an 11-stranded beta sandwich, which sometimes contain small helical insertions between the loops connecting the strands []. To date, genes encoding FHA-containing proteins have been identified in eubacterial and eukaryotic but not archaeal genomes. The domain is present in a diverse range of proteins, such as kinases, phosphatases, kinesins, transcription factors, RNA-binding proteins and metabolic enzymes which partake in many different cellular processes - DNA repair, signal transduction, vesicular transport and protein degradation are just a few examples.; GO: 0005515 protein binding; PDB: 1LGQ_B 1LGP_A 2CSW_A 2PIE_A 3FM8_A 3MDB_B 3GQS_B 1UHT_A 1WLN_A 3POA_A ....

>COG5025 Transcription factor of the Forkhead/HNF3 family [Transcription]

Probab=94.95  E-value=0.0081  Score=70.01  Aligned_cols=61  Identities=25%  Similarity=0.137  Sum_probs=51.1

Q ss_pred             CCceEEEEecceeEeeecCeEEEccCCCC---------------CccceecCCCCCCccccccceEEeeccc---eeEEe
Q 004452          686 HGAFAILYGRHSKHYIKKPEVLLGRATED---------------VVVDIDLGREGRTNKISRRQVYNVFVKS---LFIKI  747 (753)
Q Consensus       686 ~~alAvL~G~~~~y~mr~~eIviGR~T~~---------------~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~i  747 (753)
                      .+++|.|.|..|.||.+..++.+||.+.-               +.+++++   |++++++|+|+.|+.+-+   -+|+|
T Consensus        71 ~qayak~~g~~~t~~v~~~s~a~gr~~~il~s~~~~lt~s~~~~~~~~~~~---~~~k~~~~~~~sIr~Nls~~~a~~~i  147 (610)
T COG5025          71 IQAYAKLAGSNWTYYVPPYSYATGRGLAILNSPDKPLTLSKIYTWIHNTFF---YYAKVVSRWQNSIRHNLSLNDAFIKI  147 (610)
T ss_pred             hhhHHHhcCCCcccccCCeeeeeccccccccCcccCCcccceeeeeeeccc---ccccccchhhhhhhcccccCceEEEE
Confidence            36779999999999999999999997662               3477888   999999999999999855   66665


Q ss_pred             cc
Q 004452          748 GH  749 (753)
Q Consensus       748 g~  749 (753)
                      -|
T Consensus       148 ~g  149 (610)
T COG5025         148 EG  149 (610)
T ss_pred             ec
Confidence            44

>smart00240 FHA Forkhead associated domain

Probab=94.65  E-value=0.034  Score=43.12  Aligned_cols=41  Identities=34%  Similarity=0.510  Sum_probs=29.4

Q ss_pred             EEEccCCCCCccceecCCCCCCccccccceEEeeccc--eeEEecccCC
Q 004452          706 VLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS--LFIKIGHDKH  752 (753)
Q Consensus       706 IviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d--FyI~ig~~~~  752 (753)
                      ++|||+...+  ||-|.  ++.  |||+||.|+++.+  |||+-...++
T Consensus         1 ~~iGr~~~~~--~i~~~--~~~--vs~~H~~i~~~~~~~~~i~d~~s~~   43 (52)
T smart00240        1 VTIGRSSEDC--DIQLP--GPS--ISRRHAEIVYDGGGRFYLIDLGSTN   43 (52)
T ss_pred             CEeCCCCCCC--CEEeC--CCC--cchhHcEEEECCCCeEEEEECCCCC
Confidence            4799998733  44442  443  9999999999976  9998554443

Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.

>TIGR03354 VI_FHA type VI secretion system FHA domain protein

Probab=85.53  E-value=0.82  Score=51.17  Aligned_cols=49  Identities=14%  Similarity=0.201  Sum_probs=38.8

Q ss_pred             EecceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          693 YGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       693 ~G~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      .|....|.+.....+|||+..   .|+=|  ..+...|||+||+|.+..+ |||+
T Consensus        13 ~g~~~~~~f~~~~~~IGR~~~---~d~~l--~d~~~~VS~~Ha~I~~~~g~~~l~   62 (396)
T TIGR03354        13 PGIAAQKTFGTNGGTIGRSED---CDWVL--PDPERHVSGRHARIRYRDGAYLLT   62 (396)
T ss_pred             CCcceEEEECCCCEEEecCCC---CCEEe--CCCCCCcchhhcEEEEECCEEEEE
Confidence            356678899999999999885   23333  3566779999999999977 9998

Members of this protein family are FHA (forkhead-associated) domain-containing proteins that are part of type VI secretion loci in a considerable number of bacteria, most of which are known pathogens. Species include Pseudomonas aeruginosa PAO1, Aeromonas hydrophila, Yersinia pestis, Burkholderia mallei, etc.

>COG1716 FOG: FHA domain [Signal transduction mechanisms]

Probab=82.36  E-value=1.8  Score=41.85  Aligned_cols=53  Identities=25%  Similarity=0.229  Sum_probs=36.0

Q ss_pred             CceEEEEecceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          687 GAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       687 ~alAvL~G~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      ....+......++......+++|| +.  ..||=|    +-..|||+||.|++..+ +||+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~tigr-~~--~~~i~~----~~~~vSR~Ha~l~~~~~~~~~~  125 (191)
T COG1716          72 LAVTIGLDEGSVIVLGEPVTTIGR-DP--DNDIVL----DDDVVSRRHAELRREGNEVFLE  125 (191)
T ss_pred             ceEEEecccCcccccccceEEecc-CC--CCCEEc----CCCccccceEEEEEeCCceEEE
Confidence            333344444556777777999999 22  222222    34889999999999999 7766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	753
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 4e-04
 Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 88/288 (30%)

Query: 3   EYERSALTLPK---VFSRAGNSKEIKLSSGKRK---------AESVRSC-----YYALRK 45
           ++    LT  +   +  +  + +   L               AES+R        +   K
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW---K 348

Query: 46  RIHNEPFNSI---DLSFLNAPGNRNFYG-------NGDEPPSRNCML------GDPM--A 87
            ++ +   +I    L+ L     R  +        +   P     ++       D M   
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 88  NHF---GLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHR-------FHGGFDH----PGE 133
           N      L +          P I ++      +   LHR           FD     P  
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 134 ED---FS--------MQQGEMHEEIPHIFEENQSFRGNGARVVELGL----PGQVPNLFE 178
            D   +S        ++  E       +F     FR    ++          G + N   
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVF---LDFRFLEQKIRHDSTAWNASGSILNTL- 524

Query: 179 ADHMEANPLSTYGQ--TNDDAGN---ICTLE------GNQVFRSPIPD 215
                   L  Y     ++D      +  +          +  S   D
Sbjct: 525 QQ------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 7e-04
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 49/157 (31%)

Query: 561 PNFVSN-GCKSHERNTNGV--KQELDYPAITQESHALN----------------VE--VG 599
             FV N  CK  +     +  K+E+D+  I     A++                V+  V 
Sbjct: 27  DAFVDNFDCKDVQDMPKSILSKEEIDH--IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84

Query: 600 SLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKY 659
            +   + + +M+P  TE   PS+ +      Y    + +  D            Q  +KY
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRM----YIEQRDRLYNDN-----------QVFAKY 129

Query: 660 QHEDTRRAIIRLEQGAHSYMQRAI--LSHGAFAILYG 694
                   + RL+   +  +++A+  L      ++ G
Sbjct: 130 N-------VSRLQP--YLKLRQALLELRPAKNVLIDG 157

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	753
3po8_A	100	RV0020C protein, putative uncharacterized protein	95.93
1lgp_A	116	Cell cycle checkpoint protein CHFR; FHA, tungstate	95.92
1r21_A	128	Antigen KI-67; beta sandwich, cell cycle; NMR {Hom	95.54
2kb3_A	143	Oxoglutarate dehydrogenase inhibitor; forkhead-ass	95.48
1uht_A	118	Expressed protein; FHA domain, beta-sandwich, anti	95.4
2xt9_B	115	Putative signal transduction protein GARA; lyase-s	95.4
2pie_A	138	E3 ubiquitin-protein ligase RNF8; FHA domain, comp	95.31
2kfu_A	162	RV1827 PThr 22; FHA domain, phosphorylation, intra	95.3
3gqs_A	106	Adenylate cyclase-like protein; FHA domain, struct	95.21
1g6g_A	127	Protein kinase RAD53; beta-sandwich, phosphopeptid	95.21
2jpe_A	140	Nuclear inhibitor of protein phosphatase 1; FHA do	94.97
1gxc_A	149	CHK2, CDS1, serine/threonine-protein kinase CHK2;	94.93
3va4_A	132	Mediator of DNA damage checkpoint protein 1; cell	94.86
3oun_A	157	Putative uncharacterized protein TB39.8; peptidogl	94.5
2csw_A	145	Ubiquitin ligase protein RNF8; 11-stranded beta sa	94.45
1g3g_A	164	Protien kinase SPK1; FHA domain, RAD53, phosphopep	93.94
3hx1_A	131	SLR1951 protein; P74513_SYNY3, adenylate cyclase-l	93.85
1mzk_A	139	Kinase associated protein phosphatase; beta sandwi	93.73
2ff4_A	388	Probable regulatory protein EMBR; winged-helix, te	93.57
4ejq_A	154	Kinesin-like protein KIF1A; homodimer, FHA domain,	93.1
3fm8_A	124	Kinesin-like protein KIF13B; kinesin, GAP, GTPase	93.08
1wln_A	120	Afadin; beta sandwich, FHA domain, structural geno	92.95
4h87_A	130	Kanadaptin; FHA domain of PF00498, mRNA processing	92.82
1dmz_A	158	Protein (protein kinase SPK1); beta-sandwich, anti	91.7
3els_A	158	PRE-mRNA leakage protein 1; intrinsically unstruct	91.5
2jqj_A	151	DNA damage response protein kinase DUN1; protein/p	91.39
1qu5_A	182	Protein kinase SPK1; FHA, RAD53, transferase; NMR	89.99
3elv_A	205	PRE-mRNA leakage protein 1; intrinsically unstruct	87.94
3kt9_A	102	Aprataxin; FHA domain, beta sandwich, beta sheet,	85.06
2brf_A	110	Bifunctional polynucleotide phosphatase/kinase; hy	84.31
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	81.64

>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A

Probab=95.93  E-value=0.0082  Score=52.28  Aligned_cols=51  Identities=14%  Similarity=0.264  Sum_probs=39.5

Q ss_pred             EEEecceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          691 ILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       691 vL~G~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      +..|.-.+|.+...+++|||+..   .||-|.    ...|||+||.|.+... |||+ .|
T Consensus        10 ~~~g~g~~~~l~~~~~~IGR~~~---~di~l~----d~~vSr~Ha~i~~~~~~~~l~Dl~   62 (100)
T 3po8_A           10 LDDGSGRTYQLREGSNIIGRGQD---AQFRLP----DTGVSRRHLEIRWDGQVALLADLN   62 (100)
T ss_dssp             ECSSSCCEEECCSEEEEEESSTT---CSEECC----CTTSCSSCEEEEECSSCEEEEECS
T ss_pred             EECCCCcEEEECCCCEEEeCCCC---CCEECC----CCCcChhhCEEEEeCCEEEEEECC
Confidence            34566678999999999999763   355552    3489999999999877 9998 54

>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A

Probab=95.92  E-value=0.015  Score=51.84  Aligned_cols=54  Identities=15%  Similarity=0.194  Sum_probs=39.2

Q ss_pred             ceEEEEec-----ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeec--cc-eeEEe
Q 004452          688 AFAILYGR-----HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV--KS-LFIKI  747 (753)
Q Consensus       688 alAvL~G~-----~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~--~d-FyI~i  747 (753)
                      .+|.|.-.     ...|.+...+++|||+..   .||=|.   ....|||+||.|.+.  .. |||+=
T Consensus         3 ~wg~L~~~~~~~~~~~~~l~~~~~~iGR~~~---~di~l~---~~~~vSr~Ha~i~~~~~~~~~~l~D   64 (116)
T 1lgp_A            3 PWGRLLRLGAEEGEPHVLLRKREWTIGRRRG---CDLSFP---SNKLVSGDHCRIVVDEKSGQVTLED   64 (116)
T ss_dssp             CCEEECCTTCCSSSCCEEECSSEEEEESSTT---SSEECT---TCTTSCTTCEEEEECTTTCCEEEEE
T ss_pred             CEEEEEEeCCCCCccEEEECCCCEEECCCCC---CCEEeC---CCCCCChhHeEEEEECCCCeEEEEE
Confidence            45655433     347889999999999984   455552   235899999999997  33 99985

>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*

Probab=95.54  E-value=0.023  Score=51.55  Aligned_cols=55  Identities=13%  Similarity=0.201  Sum_probs=41.1

Q ss_pred             CceEEEEe---cceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          687 GAFAILYG---RHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       687 ~alAvL~G---~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      ..|-++.|   .--+|.+....++|||+..   .||-|.    ...|||+||.|.+... |||+ .|
T Consensus        13 ~~L~v~~~~~~~g~~~~l~~~~~~IGR~~~---~di~l~----d~~VSr~Ha~i~~~~~~~~l~Dl~   72 (128)
T 1r21_A           13 RRLVTIKRSGVDGPHFPLSLSTCLFGRGIE---CDIRIQ----LPVVSKQHCKIEIHEQEAILHNFS   72 (128)
T ss_dssp             EEEEEEEETTEEEEEEECCSSEEEEESSTT---SSEECC----CTTSCTTCEEEEECSSCEEECCCC
T ss_pred             eEEEEEeCCCCCceEEEECCCCEEECCCCC---CCEEEC----CCCCChhHEEEEEECCEEEEEECC
Confidence            45566664   2456889899999999875   455553    2389999999999877 9998 43

>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A

Probab=95.48  E-value=0.028  Score=52.78  Aligned_cols=55  Identities=22%  Similarity=0.338  Sum_probs=41.8

Q ss_pred             CceEEEEec--ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          687 GAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       687 ~alAvL~G~--~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      ..|-|+.|.  -.+|.+....++|||...   .||-|.    -..|||+||.|.+... |||+ .|
T Consensus        47 ~~L~v~~G~~~g~~~~L~~~~~~IGR~~~---~di~l~----d~~VSr~Ha~I~~~~~~~~l~Dlg  105 (143)
T 2kb3_A           47 ALLVVKRGPNAGARFLLDQPTTTAGRHPE---SDIFLD----DVTVSRRHAEFRINEGEFEVVDVG  105 (143)
T ss_dssp             EEEEEEESTTTTCEEEECSSEEEESSCTT---CSBCCC----CSSCCSSSEEEEEETTEEEEEESC
T ss_pred             EEEEEEeCCCCCeEEEeCCCCeeccCCCC---CCEEeC----CCCcChhhEEEEEECCEEEEEECC
Confidence            346666664  468999999999999864   344442    3589999999999777 9998 43

>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2

Probab=95.40  E-value=0.015  Score=52.10  Aligned_cols=46  Identities=17%  Similarity=0.220  Sum_probs=34.9

Q ss_pred             eeEeeec-CeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          697 SKHYIKK-PEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       697 ~~y~mr~-~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      .+|.+.. ..++|||+...+  ||-|.    -..|||+||.|.+..+ |||+ .|
T Consensus        25 ~~~~l~~~~~~~iGR~~~~~--di~l~----d~~vSr~Ha~i~~~~~~~~l~Dl~   73 (118)
T 1uht_A           25 DALDYKPGSTIRVGRIVRGN--EIAIK----DAGISTKHLRIESDSGNWVIQDLG   73 (118)
T ss_dssp             CBCCBCTTCCEEEESSSTTC--SEECC----SSSSCTTCEEEEECSSSEEEECCC
T ss_pred             cEEEECCCCEEEEcCCCCCC--CEEeC----CCCCchHHeEEEEECCEEEEEECC
Confidence            4677775 689999996544  44442    3679999999999877 9998 54

>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}

Probab=95.40  E-value=0.037  Score=49.48  Aligned_cols=55  Identities=22%  Similarity=0.337  Sum_probs=42.0

Q ss_pred             CceEEEEec--ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          687 GAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       687 ~alAvL~G~--~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      ..|-++.|.  -.+|.+...+++|||+..   .||-|.    ...|||+||.|.+... |||+ .|
T Consensus        12 ~~L~v~~g~~~g~~~~l~~~~~~IGR~~~---~di~l~----d~~vSr~Ha~i~~~~~~~~l~Dl~   70 (115)
T 2xt9_B           12 ALLVVKRGPNAGSRFLLDQPTTSAGRHPD---SDIFLD----DVTVSRRHAEFRLEGGEFQVVDVG   70 (115)
T ss_dssp             EEEEEEESTTTTCEEEECSSEEEEESSTT---SSEECC----STTSCSSCEEEEEETTEEEEEECS
T ss_pred             EEEEEEeCCCCCeEEEECCCCEEECCCCC---CCEEeC----CcccChhheEEEEECCEEEEEECC
Confidence            445666665  467899999999999974   455553    2589999999999877 9998 43

>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2

Probab=95.31  E-value=0.028  Score=51.91  Aligned_cols=46  Identities=22%  Similarity=0.061  Sum_probs=34.2

Q ss_pred             eEeee-cCeEEEccCCCCCccceecCCCCCCccccccceEEeec-cc-eeEE
Q 004452          698 KHYIK-KPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV-KS-LFIK  746 (753)
Q Consensus       698 ~y~mr-~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~-~d-FyI~  746 (753)
                      +|.+. ..+++|||+..   .||-|........|||+||.|.+. .. |||+
T Consensus        21 ~~~l~~~~~~~IGR~~~---~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~   69 (138)
T 2pie_A           21 WLLLEDGCEVTVGRGFG---VTYQLVSKICPLMISRNHCVLKQNPEGQWTIM   69 (138)
T ss_dssp             BEEECTTCCEEEESSSS---SSEECCCSSCTTSSCSSCEEEEECTTSCEEEE
T ss_pred             EEEecCCCeEEECCCCC---CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEE
Confidence            56666 77899999983   566664333335699999999995 43 9998

>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A

Probab=95.30  E-value=0.026  Score=54.32  Aligned_cols=55  Identities=20%  Similarity=0.288  Sum_probs=42.4

Q ss_pred             CceEEEEec--ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          687 GAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       687 ~alAvL~G~--~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      ..|-|+.|.  -.+|.+....++|||...   -||-|.    ...|||+||.|.+..+ |||+ .|
T Consensus        56 ~~L~v~~G~~~g~~~~L~~~~~~IGR~~~---~di~l~----d~~VSr~HA~I~~~~~~~~l~Dlg  114 (162)
T 2kfu_A           56 ALLVVKRGPNAGSRFLLDQAITSAGRHPD---SDIFLD----DVTVSRRHAEFRLENNEFNVVDVG  114 (162)
T ss_dssp             CEEEEEESTTCSCEEETTSSEEEEESCSS---SSEEST----TTSSSSCSEEEEEETTEEEEECCC
T ss_pred             EEEEEEeCCCCCeEEEECCCCEEECCCCC---CCEEEC----CCCcChhhEEEEEECCEEEEEECC
Confidence            345667764  368999999999999864   455553    3589999999999877 9998 54

>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}

Probab=95.21  E-value=0.03  Score=49.28  Aligned_cols=52  Identities=19%  Similarity=0.327  Sum_probs=36.6

Q ss_pred             eEEEEec--ceeEeeec-CeEEEccCCCCCccceecCCCCCCccccccceEEeecc-c-eeEE
Q 004452          689 FAILYGR--HSKHYIKK-PEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK-S-LFIK  746 (753)
Q Consensus       689 lAvL~G~--~~~y~mr~-~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-d-FyI~  746 (753)
                      |-++.|.  -.+|.+.. +.++|||+..++  ||-|.    -..|||+||.|.+.. . |||+
T Consensus         7 L~v~~G~~~g~~~~l~~~~~~~iGR~~~~~--di~l~----d~~vSr~Ha~i~~~~~~~~~l~   63 (106)
T 3gqs_A            7 LKVLAGANIGAEFHLDSGKTYIVGSDPQVA--DIVLS----DMSISRQHAKIIIGNDNSVLIE   63 (106)
T ss_dssp             EEECC-CCTTCEEEECTTCEEEEESCTTTC--SEECC----CTTSCSSCEEEEECTTSCEEEE
T ss_pred             EEEEeCCCCcEEEEECCCCEEEEeECCCcC--CEEeC----CCCcchhhcEEEECCCCcEEEE
Confidence            4555655  34677776 468999997544  44442    257999999999984 4 9998

>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2

Probab=95.21  E-value=0.027  Score=51.21  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=28.0

Q ss_pred             eEEEccCCCCCccceecCCCCCCccccccceEEeec-cc-eeEE
Q 004452          705 EVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV-KS-LFIK  746 (753)
Q Consensus       705 eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~-~d-FyI~  746 (753)
                      .++|||+..   .||-|.  . .+.|||+||.|.+. .. |||+
T Consensus        37 ~~~IGR~~~---~di~l~--~-~~~vSr~Ha~i~~~~~g~~~l~   74 (127)
T 1g6g_A           37 VWTFGRNPA---CDYHLG--N-ISRLSNKHFQILLGEDGNLLLN   74 (127)
T ss_dssp             EEEEESSTT---SSEECC--S-CTTSCSSCEEEEECTTSCEEEE
T ss_pred             CEEECCCCC---CCEEeC--C-CCCCChhHeEEEECCCCcEEEE
Confidence            899999986   466663  2 23699999999995 44 9998

>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}

Probab=94.97  E-value=0.022  Score=52.65  Aligned_cols=53  Identities=23%  Similarity=0.344  Sum_probs=38.4

Q ss_pred             ceEEEEecce--eEeeecC-eEEEccCCCCCccceecCCCCCCccccccceEEeecc--c-eeEE
Q 004452          688 AFAILYGRHS--KHYIKKP-EVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--S-LFIK  746 (753)
Q Consensus       688 alAvL~G~~~--~y~mr~~-eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~--d-FyI~  746 (753)
                      .|-++.|...  +|.+... .++|||+...+  ||-|.    -..|||+||.|.+..  + |||+
T Consensus        36 ~L~v~~g~~~g~~~~l~~~~~~~IGR~~~~~--di~l~----d~~VSr~Ha~i~~~~~~~~~~l~   94 (140)
T 2jpe_A           36 HLDVVKGDKLIEKLIIDEKKYYLFGRNPDLC--DFTID----HQSCSRVHAALVYHKHLKRVFLI   94 (140)
T ss_dssp             BEEEESSSSEEEEECCSSCSBCCBSSCTTTS--SSCCC----CSSSCTTSBEEEEBSSSCCEEEE
T ss_pred             EEEEEcCCCcceEEEeCCCCeEEecCCCccC--CEEeC----CCCcChhheEEEEECCCCcEEEE
Confidence            3566666543  6777775 59999988644  34332    347999999999997  4 9998

>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2

Probab=94.93  E-value=0.023  Score=53.25  Aligned_cols=52  Identities=8%  Similarity=0.063  Sum_probs=36.3

Q ss_pred             EecceeEeeecCeEEEccCCCCCccceecCC-----CCCCccccccceEEeeccc------eeEEe
Q 004452          693 YGRHSKHYIKKPEVLLGRATEDVVVDIDLGR-----EGRTNKISRRQVYNVFVKS------LFIKI  747 (753)
Q Consensus       693 ~G~~~~y~mr~~eIviGR~T~~~~VDIDLs~-----EGpa~kISRrQA~Ikl~~d------FyI~i  747 (753)
                      .+..-.|.+....++|||+..   .||=|..     ......|||+||.|....+      |||+=
T Consensus        37 ~~~~~~i~L~~~~~~IGR~~~---~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D   99 (149)
T 1gxc_A           37 QDGFANLECVNDNYWFGRDKS---CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED   99 (149)
T ss_dssp             STTCCCEEECSSEEEEESSTT---CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             CCCCceEEECCCCEEecCCCC---CCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEE
Confidence            355566889999999999872   3444421     1123359999999999864      88873

>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B

Probab=94.86  E-value=0.038  Score=51.22  Aligned_cols=54  Identities=15%  Similarity=0.274  Sum_probs=41.8

Q ss_pred             CCceEEEEecc---eeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeecc--c-eeEE
Q 004452          686 HGAFAILYGRH---SKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--S-LFIK  746 (753)
Q Consensus       686 ~~alAvL~G~~---~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~--d-FyI~  746 (753)
                      .+.|-|+.|..   .+|.+...+++|||+..   .||-|.    -..|||+||.|.+..  + |||+
T Consensus        24 ~g~L~v~~g~~~~g~~~~L~~~~~~IGR~~~---~di~l~----d~~VSr~HA~i~~~~~~~~~~l~   83 (132)
T 3va4_A           24 IGQLRLFSGTHGPERDFPLYLGKNVVGRSPD---CSVALP----FPSISKQHAVIEISAWNKAPILQ   83 (132)
T ss_dssp             SEEEEECCBTTBSCEEEEECSEEEEEESSTT---SSEECC----CTTSCTTCEEEEECSTTSCCEEE
T ss_pred             cEEEEEEeCCCCCceEEEECCCCEEEccCCC---CCEEeC----CCCcChhHEEEEEEcCCCEEEEE
Confidence            35566777765   78999999999999875   355553    248999999999973  3 9998

>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}

Probab=94.50  E-value=0.037  Score=53.23  Aligned_cols=49  Identities=14%  Similarity=0.283  Sum_probs=38.5

Q ss_pred             EecceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          693 YGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       693 ~G~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      .|.-.+|.+...+++|||+..   .||-|.    -..|||+||+|.+..+ |||+ .+
T Consensus        74 ~g~g~~~~L~~~~~~IGR~~~---~dI~L~----d~~VSr~HA~I~~~~~~~~l~Dlg  124 (157)
T 3oun_A           74 DGSGRTYQLREGSNIIGRGQD---AQFRLP----DTGVSRRHLEIRWDGQVALLADLN  124 (157)
T ss_dssp             TTTCCEEECCSEEEEEESSTT---CSEECC----CTTSCTTCEEEEECSSCEEEEECS
T ss_pred             CCCCeEEEECCCcEEEEeCCC---CCEEeC----CCCcChhHEEEEEECCEEEEEECC
Confidence            455678999999999999764   355552    3489999999999877 9998 53

>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2

Probab=94.45  E-value=0.051  Score=50.65  Aligned_cols=45  Identities=22%  Similarity=0.083  Sum_probs=32.1

Q ss_pred             Eee-ecCeEEEccCCCCCccceecCCCCCCccccccceEEeec-cc-eeEE
Q 004452          699 HYI-KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV-KS-LFIK  746 (753)
Q Consensus       699 y~m-r~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~-~d-FyI~  746 (753)
                      |.+ ...+++|||+..   .||-|........|||+||.|.+. .. |||+
T Consensus        30 ~~l~~~~~~~IGR~~~---~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~   77 (145)
T 2csw_A           30 LLLEDGCEVTVGRGFG---VTYQLVSKICPLMISRNHCVLKQNPEGQWTIM   77 (145)
T ss_dssp             EECCTTCCEEEESSTT---SSEECCCSSCGGGSCTTCEEEEECTTSCEEEE
T ss_pred             EEeCCCCcEEECCCCC---CCEEECCCCcCCCCChhHeEEEEcCCCeEEEE
Confidence            444 667899999983   566664322233599999999995 44 9998

>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*

Probab=93.94  E-value=0.061  Score=51.27  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=28.0

Q ss_pred             eEEEccCCCCCccceecCCCCCCccccccceEEeec-cc-eeEE
Q 004452          705 EVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV-KS-LFIK  746 (753)
Q Consensus       705 eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~-~d-FyI~  746 (753)
                      .++|||+..   .||-|.  . .+.|||+||.|.+. .. |||+
T Consensus        65 ~~~IGR~~~---~di~l~--d-~~~vSr~Ha~I~~~~~g~~~l~  102 (164)
T 1g3g_A           65 VWTFGRNPA---CDYHLG--N-ISRLSNKHFQILLGEDGNLLLN  102 (164)
T ss_dssp             EEEEESSSS---SSEECC--C-CTTTTSSCEEEEECSTTCEEEE
T ss_pred             cEEECCCCC---CCEEeC--C-cCCcChhHEEEEECCCCCEEEE
Confidence            899999876   566663  2 33699999999996 44 9998

>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}

Probab=93.85  E-value=0.15  Score=47.06  Aligned_cols=54  Identities=17%  Similarity=0.216  Sum_probs=39.4

Q ss_pred             CCceEEEEec--ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeecc--c----eeEE
Q 004452          686 HGAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--S----LFIK  746 (753)
Q Consensus       686 ~~alAvL~G~--~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~--d----FyI~  746 (753)
                      ..++-++.+.  ..+|.+....++|||+..   .||-|    +...|||+||+|.+..  +    |||+
T Consensus        10 ~~~~lvv~~~~~~~~~~l~~~~~~IGR~~~---~di~l----~d~~VSr~Ha~I~~~~~~~g~~~~~l~   71 (131)
T 3hx1_A           10 QEHILIILDDAGRREVLLTETFYTIGRSPR---ADIRI----KSQFVSRIHAVLVRKSSDDVQAAYRII   71 (131)
T ss_dssp             CEEEEEEEETTEEEEEEECSSEEEEESSTT---SSEEC----CCSSSCTTCEEEEEC------CCEEEE
T ss_pred             cceEEEEECCCCcEEEEECCCCEEECCCCC---CCEEE----CCCCcChhheEEEEEccCCCceEEEEE
Confidence            4556666654  357889999999999976   45555    2246999999999872  2    8888

>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*

Probab=93.57  E-value=0.17  Score=53.58  Aligned_cols=47  Identities=19%  Similarity=0.234  Sum_probs=37.8

Q ss_pred             cceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          695 RHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       695 ~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      .-.+|.+.+..++|||+..   .||-|.    ...|||+||.|.+..+ |||+ .|
T Consensus       297 ~g~~~~l~~~~~~iGR~~~---~di~l~----~~~vSr~Ha~i~~~~~~~~l~Dl~  345 (388)
T 2ff4_A          297 SGRGYPLQAAATRIGRLHD---NDIVLD----SANVSRHHAVIVDTGTNYVINDLR  345 (388)
T ss_dssp             TCCEEECCSSEEEEESSTT---SSEECC----CTTSCTTCEEEEECSSCEEEEECS
T ss_pred             CCcEEEECCCCEEEecCCC---CeEEEC----CCccChhHeEEEEECCEEEEEECC
Confidence            4578999999999999875   355552    3679999999999877 9998 44

>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A

Probab=93.10  E-value=0.12  Score=48.83  Aligned_cols=44  Identities=23%  Similarity=0.154  Sum_probs=36.9

Q ss_pred             cceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc
Q 004452          695 RHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS  742 (753)
Q Consensus       695 ~~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d  742 (753)
                      ..+.|+++.-.++|||...+...||=|.  |  ..|||+||+|....+
T Consensus        52 ~~lvy~L~~g~t~IGR~~~~~~~DI~L~--~--~~Vs~~H~~i~~~~~   95 (154)
T 4ejq_A           52 ECLLYYIKDGITRVGREDGERRQDIVLS--G--HFIKEEHCVFRSDSR   95 (154)
T ss_dssp             SEEEEECCSEEEEEECSSCSSCCSEECC--C--TTCCSEEEEEEEECT
T ss_pred             ceEEEEeCCCCEEEcCCCCCCCCCEEEC--C--CCcccccEEEEEecC
Confidence            4578999999999999988777888884  3  579999999999754

>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*

Probab=93.08  E-value=0.11  Score=48.03  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=34.8

Q ss_pred             ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeec-cc-eeEE-ec
Q 004452          696 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV-KS-LFIK-IG  748 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~-~d-FyI~-ig  748 (753)
                      .+.|+++. .++|||+..   .||-|.  |+  .|||+||+|... .. +||+ .+
T Consensus        41 ~l~y~L~~-~t~IGR~~~---~DI~L~--~~--~Vs~~Ha~I~~~~~g~~~l~dl~   88 (124)
T 3fm8_A           41 LLVYYLKE-HTLIGSANS---QDIQLC--GM--GILPEHCIIDITSEGQVMLTPQK   88 (124)
T ss_dssp             CCEEECCS-EEEEESSTT---CSEECC--ST--TCCSSCEEEEECTTSCEEEEECT
T ss_pred             eEEEECCC-CeEECCCCC---CCEEEC--CC--CeecceEEEEECCCCeEEEEECC
Confidence            36799987 599999875   577774  43  699999999985 33 9998 54

>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2

Probab=92.95  E-value=0.16  Score=45.71  Aligned_cols=47  Identities=9%  Similarity=-0.033  Sum_probs=35.5

Q ss_pred             ceeEeeecCeEEEccC-CCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          696 HSKHYIKKPEVLLGRA-TEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~-T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      -..|.+...+++|||. +.  ..||-|.    ...|||+||.|..... |||+ .+
T Consensus        28 ~~~~~L~~~~~~IGr~r~~--~~di~l~----~~~vSr~Ha~i~~~~~~~~l~dl~   77 (120)
T 1wln_A           28 PKLYRLQLSVTEVGTEKFD--DNSIQLF----GPGIQPHHCDLTNMDGVVTVTPRS   77 (120)
T ss_dssp             CCEEECCSEEEECSSSCCS--TTCCCCC----CTTCCSSCEEEEESSSCEEEEESC
T ss_pred             cEEEEECCCCEEECCCCCC--CCcEEEC----CCCCchhheEEEEcCCEEEEEECC
Confidence            4579999999999985 33  3445452    3579999999999877 9998 44

>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}

Probab=92.82  E-value=0.2  Score=46.21  Aligned_cols=46  Identities=24%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             ceEEEEecce--eEeeec-CeEEEccCCCCCccceecCCCCCCccccccceEEeec
Q 004452          688 AFAILYGRHS--KHYIKK-PEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFV  740 (753)
Q Consensus       688 alAvL~G~~~--~y~mr~-~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~  740 (753)
                      .|-||.|...  ++.+.. ..++|||+..   .||=|  +  -..|||+||+|.++
T Consensus        22 ~L~v~k~g~~~~~~~L~~~~~~~IGR~~~---~di~l--~--~~~VSr~HA~I~~r   70 (130)
T 4h87_A           22 SLETLKGGTILGTRSLKGTSYCLFGRLSG---CDVCL--E--HPSVSRYHAVLQHR   70 (130)
T ss_dssp             EEEEEETTEEEEEEECTTCSEEEEESSTT---SSEEC--C--CTTSCSSCEEEEEB
T ss_pred             EEEEEECCeeeeeEEeCCCceEEEcCCcC---CCEEe--C--CCCcchhcEEEEEe
Confidence            4667777643  456654 4589999863   45555  2  24699999999763

>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*

Probab=91.70  E-value=0.11  Score=49.17  Aligned_cols=38  Identities=16%  Similarity=0.337  Sum_probs=28.1

Q ss_pred             eeEeeecCe--EEEccCCCCCccceecCCCCCCccccccceEEeecc
Q 004452          697 SKHYIKKPE--VLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK  741 (753)
Q Consensus       697 ~~y~mr~~e--IviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~  741 (753)
                      ..|++....  ++|||+..   .||=|.  .  ..|||+||.|.+..
T Consensus        18 ~~i~L~~~~~~~~IGR~~~---~di~l~--d--~~VSr~Ha~I~~~~   57 (158)
T 1dmz_A           18 ESLEIQQGVNPFFIGRSED---CNCKIE--D--NRLSRVHCFIFKKR   57 (158)
T ss_dssp             CCEEETTSCSCEEEESSTT---SSEECC--C--TTSCSSSEEEEEEE
T ss_pred             eEEEEcCCCceEEECCCCC---CCEEeC--C--CCcChHHeEEEEec
Confidence            467777666  99999863   355552  2  38999999999875

>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}

Probab=91.50  E-value=0.32  Score=46.45  Aligned_cols=55  Identities=18%  Similarity=0.256  Sum_probs=37.4

Q ss_pred             ceEEEEecc------eeEee-ecCeEEEccCCC------------CCccceecCCCCCCccccccceEEeeccc-----e
Q 004452          688 AFAILYGRH------SKHYI-KKPEVLLGRATE------------DVVVDIDLGREGRTNKISRRQVYNVFVKS-----L  743 (753)
Q Consensus       688 alAvL~G~~------~~y~m-r~~eIviGR~T~------------~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-----F  743 (753)
                      -|-|++|..      -+|.+ .+..++|||+..            ....||-|.    -..|||+||+|.+..+     |
T Consensus        33 ~l~v~k~g~~~~~~~~~~~L~~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~----~~~VSr~HA~I~~~~~~~~~~~  108 (158)
T 3els_A           33 ELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIP----EETSSKQHCVIQFRNVRGILKC  108 (158)
T ss_dssp             EEEEEEGGGGGGCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEEC----CTTSCSSCEEEEEEEETTEEEE
T ss_pred             EEEEEeCCccCcccceEEEecCCCceEeccccccccccccccccccccCCEEcC----CCCCCcccEEEEEEccCCeeEE
Confidence            366776643      14545 456789999963            133566552    3489999999999754     8


Q ss_pred             eEE
Q 004452          744 FIK  746 (753)
Q Consensus       744 yI~  746 (753)
                      ||+
T Consensus       109 ~l~  111 (158)
T 3els_A          109 YVM  111 (158)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            888

>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*

Probab=91.39  E-value=0.37  Score=45.08  Aligned_cols=44  Identities=18%  Similarity=0.199  Sum_probs=32.6

Q ss_pred             ceeEeee-cCeEEEccCCCCCccceecCCCCCCccccccceEEee--------ccc-eeEE
Q 004452          696 HSKHYIK-KPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVF--------VKS-LFIK  746 (753)
Q Consensus       696 ~~~y~mr-~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl--------~~d-FyI~  746 (753)
                      -.+|.+. +.+++|||+..   .||-|.    ...|||+||+|.+        ... |||+
T Consensus        29 g~~~~l~~~~~~~IGR~~~---~di~l~----d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~   82 (151)
T 2jqj_A           29 EQKVEITNRNVTTIGRSRS---CDVILS----EPDISTFHAEFHLLQMDVDNFQRNLINVI   82 (151)
T ss_dssp             EEEEEEECCSCEEEESSTT---SSEECC----CTTCCTTSEEEEEEEEEETTEEEEEEEEE
T ss_pred             ceEEEEcCCCeEEeCCCCC---CCEEEC----CCCCccccCEEEEecccCCcCcCCEEEEE
Confidence            3466676 48999999973   456553    3469999999999        334 9998

>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2

Probab=89.99  E-value=0.17  Score=49.31  Aligned_cols=38  Identities=18%  Similarity=0.376  Sum_probs=27.8

Q ss_pred             eeEeeecCe--EEEccCCCCCccceecCCCCCCccccccceEEeecc
Q 004452          697 SKHYIKKPE--VLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK  741 (753)
Q Consensus       697 ~~y~mr~~e--IviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~  741 (753)
                      ..|++....  ++|||+..   .||=|  ..  ..|||+||.|.+..
T Consensus        42 ~~i~L~~~~~~~~IGR~~~---~di~l--~d--~~VSr~HA~I~~~~   81 (182)
T 1qu5_A           42 ESLEIQQGVNPFFIGRSED---CNCKI--ED--NRLSRVHCFIFKKR   81 (182)
T ss_dssp             SCCCBTTCCSSEEESSSTT---SSSCC--CC--TTSCSSCEEEEEEC
T ss_pred             eEEEEcCCCceEEECCCCC---CCEEE--CC--CCcChHHeEEEEec
Confidence            567777666  99999863   23434  22  38999999999875

>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A

Probab=87.94  E-value=0.82  Score=45.89  Aligned_cols=55  Identities=18%  Similarity=0.256  Sum_probs=38.1

Q ss_pred             ceEEEEecc------eeEee-ecCeEEEccCCC------------CCccceecCCCCCCccccccceEEeeccc-----e
Q 004452          688 AFAILYGRH------SKHYI-KKPEVLLGRATE------------DVVVDIDLGREGRTNKISRRQVYNVFVKS-----L  743 (753)
Q Consensus       688 alAvL~G~~------~~y~m-r~~eIviGR~T~------------~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-----F  743 (753)
                      .|-|++|-.      -+|.+ .+..++|||+..            ....||=|.    -..|||+||+|.+..+     |
T Consensus        80 ~L~v~k~g~k~~~~i~~~~L~~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~----dp~VSR~HA~I~~~~~~~~~~~  155 (205)
T 3elv_A           80 ELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIP----EETSSKQHCVIQFRNVRGILKC  155 (205)
T ss_dssp             EEEEEEGGGCTTCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEEC----CTTSCTTCEEEEEEEETTEEEE
T ss_pred             EEEEEeCCCcccccceEEEecCCCceeecccccccccccccccccCccceEEeC----CCCCCcccEEEEEecCCCceeE
Confidence            367777533      25666 568899999953            233566663    2469999999988742     8


Q ss_pred             eEE
Q 004452          744 FIK  746 (753)
Q Consensus       744 yI~  746 (753)
                      ||.
T Consensus       156 ~l~  158 (205)
T 3elv_A          156 YVM  158 (205)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            988

>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0

Probab=85.06  E-value=0.92  Score=40.94  Aligned_cols=39  Identities=28%  Similarity=0.344  Sum_probs=28.6

Q ss_pred             ecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc---eeEE-ecc
Q 004452          702 KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS---LFIK-IGH  749 (753)
Q Consensus       702 r~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~-ig~  749 (753)
                      ....|+|||+..- .|        .-+|+||+|+.|+.+.+   .+|+ +|-
T Consensus        21 ~g~~v~iGR~p~t-~I--------~DkrcSR~h~~L~~~~~~g~v~vk~lg~   63 (102)
T 3kt9_A           21 HLEAVVIGRGPET-KI--------TDKKCSRQQVQLKAECNKGYVKVKQVGV   63 (102)
T ss_dssp             BTCEEEECSSTTT-CC--------CCTTSCSSCEEEEEETTTTEEEEEECSS
T ss_pred             CCCcEEeccCCcc-cc--------ccCcccCcceEEEEecCCCEEEEEECcC
Confidence            4556789999853 22        15799999999999865   4677 663

>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*

Probab=84.31  E-value=0.89  Score=41.70  Aligned_cols=48  Identities=27%  Similarity=0.327  Sum_probs=33.2

Q ss_pred             EecceeEee--ecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc---eeEE-ecc
Q 004452          693 YGRHSKHYI--KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS---LFIK-IGH  749 (753)
Q Consensus       693 ~G~~~~y~m--r~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~-ig~  749 (753)
                      .|.+-+-.|  ...+++|||.....-.         -+|+||+|+.|+.+.+   +.++ +|-
T Consensus        16 ~~~~~~I~Lp~~~g~~viGR~p~t~I~---------DkrcSR~hv~L~ad~~~~~v~vk~lG~   69 (110)
T 2brf_A           16 PGEAPPIFLPSDGQALVLGRGPLTQVT---------DRKCSRTQVELVADPETRTVAVKQLGV   69 (110)
T ss_dssp             TTSSCCEECCSTTCCEEECSBTTTTBC---------CTTSCSSCEEEEEETTTTEEEEEECSS
T ss_pred             CCCCCcEEeccCCCCEEEcCCCCcccc---------cccceeeeEEEEEecCCCEEEEEEccc
Confidence            344556666  4689999999843322         3799999999998755   4455 553

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=81.64  E-value=0.8  Score=47.98  Aligned_cols=59  Identities=12%  Similarity=0.072  Sum_probs=38.3

Q ss_pred             CceEEEEecceeEeeecCeEEEccCCCCCc---cceecCCCCCCccccccceEEeeccc------eeEE
Q 004452          687 GAFAILYGRHSKHYIKKPEVLLGRATEDVV---VDIDLGREGRTNKISRRQVYNVFVKS------LFIK  746 (753)
Q Consensus       687 ~alAvL~G~~~~y~mr~~eIviGR~T~~~~---VDIDLs~EGpa~kISRrQA~Ikl~~d------FyI~  746 (753)
                      +.|.++.+..-.+.+...+.+|||+.+ +.   .|.+++.......|||+||.|....+      +||+
T Consensus        11 g~l~~~~~~~~~~~l~~~~~~iGR~~~-~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~   78 (419)
T 3i6u_A           11 ARLWALQDGFANLECVNDNYWFGRDKS-CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIE   78 (419)
T ss_dssp             EEEEECSSSSCCEEECSSEEEEESSTT-SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEE
T ss_pred             eEeeecCCCCCceEecCCCEEecCCCc-cCEEECCcccccccccccccccceEEEEEcCCCCceEEEEE
Confidence            444445554557899999999999954 22   12233322334789999999976522      7776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	753
d2piea1	127	Ubiquitin ligase protein RNF8 {Human (Homo sapiens	96.34
d2ff4a3	99	Probable regulatory protein EmbR, C-terminal domai	95.9
d1lgpa_	113	Cell cycle checkpoint protein Chfr {Human (Homo sa	95.15
d2affa1	98	Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}	95.14
d1uhta_	118	FHA domain containing protein At4G14490 {Thale cre	95.13
d1gxca_	116	Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}	94.71
d1mzka_	122	Kinase associated protein phosphatase {Thale cress	93.86
d2brfa1	101	Polynucleotide kinase 3'-phosphatase {Human (Homo	92.46
d2g1la1	102	Kinesin-like protein kif1c {Human (Homo sapiens) [	92.18
d1wlna1	107	Afadin {Mouse (Mus musculus) [TaxId: 10090]}	92.15
d1g6ga_	127	Phosphotyrosine binding domain of Rad53 {Baker's y	91.58

>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Ubiquitin ligase protein RNF8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0033  Score=56.13  Aligned_cols=48  Identities=21%  Similarity=-0.038  Sum_probs=36.5

Q ss_pred             ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc--eeEE
Q 004452          696 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS--LFIK  746 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d--FyI~  746 (753)
                      .+.++-...+++|||+.   .+||.|........|||+||+|..+.+  |||+
T Consensus        16 ~~~~l~~~~~~tiGR~~---~~~~~l~~~~~~~~VSR~Ha~i~~~~~g~~~l~   65 (127)
T d2piea1          16 GWLLLEDGCEVTVGRGF---GVTYQLVSKICPLMISRNHCVLKQNPEGQWTIM   65 (127)
T ss_dssp             CBEEECTTCCEEEESSS---SSSEECCCSSCTTSSCSSCEEEEECTTSCEEEE
T ss_pred             CeEEcCCCCEEEeccCC---CccEEECCCCcccccchhheEEEECCCCeEEEE
Confidence            44455578899999974   566666544556689999999999865  9998

>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Probable regulatory protein EmbR, C-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.90  E-value=0.0063  Score=51.57  Aligned_cols=57  Identities=21%  Similarity=0.235  Sum_probs=42.5

Q ss_pred             cCCceEEEEec--ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE-ec
Q 004452          685 SHGAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK-IG  748 (753)
Q Consensus       685 ~~~alAvL~G~--~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~-ig  748 (753)
                      +.+++|.|.+-  --+|.+....++|||+.. +  ||=|  .  ...|||+||.|..+.+ |||+ .+
T Consensus         2 g~~~~~~l~~~~~G~~~~l~~~~~~IGR~~~-~--di~l--~--d~~VSr~Ha~i~~~~~~~~i~Dl~   62 (99)
T d2ff4a3           2 GQQAVAYLHDIASGRGYPLQAAATRIGRLHD-N--DIVL--D--SANVSRHHAVIVDTGTNYVINDLR   62 (99)
T ss_dssp             SSBCCCEEEETTTCCEEECCSSEEEEESSTT-S--SEEC--C--CTTSCTTCEEEEECSSCEEEEECS
T ss_pred             CCccEEEEEcCCCCCEEEECCCCEEEeeCcC-C--CEEE--C--CccccceeEEEEEeCCEEEEEECC
Confidence            35677777643  458999999999999764 3  3333  2  3479999999999877 9998 44

>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Cell cycle checkpoint protein Chfr
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.15  E-value=0.015  Score=50.18  Aligned_cols=46  Identities=15%  Similarity=0.202  Sum_probs=33.5

Q ss_pred             eeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc---eeEEec
Q 004452          697 SKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS---LFIKIG  748 (753)
Q Consensus       697 ~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~ig  748 (753)
                      ..+++.+.+++|||+..   .||-|.   .-..|||+||.|+++.+   |+|.-+
T Consensus        17 ~~~~l~~~~~~iGR~~~---~di~l~---d~~~iSr~Ha~I~~~~~~~~~~~~d~   65 (113)
T d1lgpa_          17 PHVLLRKREWTIGRRRG---CDLSFP---SNKLVSGDHCRIVVDEKSGQVTLEDT   65 (113)
T ss_dssp             CCEEECSSEEEEESSTT---SSEECT---TCTTSCTTCEEEEECTTTCCEEEEEC
T ss_pred             eEEEeCCCCEeeCCCCC---CCeEec---CCCCcChHHeEEEEccceeeEEecCC
Confidence            45788999999999754   556552   12469999999999854   555543

>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Antigen ki-67
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.015  Score=48.61  Aligned_cols=44  Identities=16%  Similarity=0.245  Sum_probs=35.8

Q ss_pred             ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          696 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      --+|.+....++|||+..   -||-|.    ...|||+||.|.+..+ |||+
T Consensus        15 g~~~~L~~~~~~IGr~~~---~di~l~----~~~is~~Ha~i~~~~~~~~i~   59 (98)
T d2affa1          15 GPHFPLSLSTCLFGRGIE---CDIRIQ----LPVVSKQHCKIEIHEQEAILH   59 (98)
T ss_dssp             EEEEECCSSEEEEESSTT---SSEEEC----CTTSCSSBEEEEECSSCEEEE
T ss_pred             ceEEEECCCCEEEeeCCC---CCEEeC----CCCcCceeEEEEEeCCEEEEE
Confidence            357999999999999654   455552    3469999999999988 9999

>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: FHA domain containing protein At4G14490
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.13  E-value=0.0093  Score=52.06  Aligned_cols=52  Identities=15%  Similarity=0.190  Sum_probs=35.8

Q ss_pred             eEEEEecc--eeEeee-cCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          689 FAILYGRH--SKHYIK-KPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       689 lAvL~G~~--~~y~mr-~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      |.++.|..  -+|.++ ...++|||....+  ||-|.    -..|||+||.|.++.+ |||+
T Consensus        15 L~v~~Gp~~g~~~~l~~~~~~~iGR~~~~~--di~l~----d~~VSr~Ha~i~~~~~~~~i~   70 (118)
T d1uhta_          15 LVFVKGPREGDALDYKPGSTIRVGRIVRGN--EIAIK----DAGISTKHLRIESDSGNWVIQ   70 (118)
T ss_dssp             EEESSSTTTTCBCCBCTTCCEEEESSSTTC--SEECC----SSSSCTTCEEEEECSSSEEEE
T ss_pred             EEEEeCCCCCcEEEeCCCCEEEECCCCcCC--eEEeC----ccCcchheeEEEEECCEEEEE
Confidence            44444532  345554 4568899987655  44442    2469999999999988 9999

>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Chk2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.012  Score=51.02  Aligned_cols=48  Identities=13%  Similarity=0.085  Sum_probs=34.2

Q ss_pred             eEeeecCeEEEccCCCCCccce---ecCCCCCCccccccceEEeeccc------eeEE
Q 004452          698 KHYIKKPEVLLGRATEDVVVDI---DLGREGRTNKISRRQVYNVFVKS------LFIK  746 (753)
Q Consensus       698 ~y~mr~~eIviGR~T~~~~VDI---DLs~EGpa~kISRrQA~Ikl~~d------FyI~  746 (753)
                      .+-+.+.+++|||+.. +.+=|   +|+..+....|||+||.|....+      +||+
T Consensus        14 ~~~L~~~~~~iGR~~~-cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~   70 (116)
T d1gxca_          14 NLECVNDNYWFGRDKS-CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIE   70 (116)
T ss_dssp             CEEECSSEEEEESSTT-CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEE
T ss_pred             eEEeCCCCEEeeeCCC-CCeEecCCccccccccceEecceEEEEEecccCCCCEEEEE
Confidence            4667788999999875 44333   34445557789999999987532      7776

>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinase associated protein phosphatase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.86  E-value=0.039  Score=48.06  Aligned_cols=58  Identities=16%  Similarity=0.234  Sum_probs=37.6

Q ss_pred             ceEEEEecc--eeEeeecC-----eEEEccCCCCCccceecCCCCCCccccccceEEeeccc---eeEEecccCC
Q 004452          688 AFAILYGRH--SKHYIKKP-----EVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS---LFIKIGHDKH  752 (753)
Q Consensus       688 alAvL~G~~--~~y~mr~~-----eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~ig~~~~  752 (753)
                      -|.|+.|..  .+|.+...     .++|||+.. +  ||=|  .  -..|||+||.|.++.+   |||+=.+..+
T Consensus         7 ~L~vi~Gp~~g~~~~l~~~~~~~~~~~IGR~~~-~--di~l--~--d~~vSr~Ha~i~~~~~~~~~~v~DlgS~n   74 (122)
T d1mzka_           7 FLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSP-S--DLAL--K--DSEVSGKHAQITWNSTKFKWELVDMGSLN   74 (122)
T ss_dssp             EEEECSSTTCSCEEEECTTCSTTCSEEEESSSS-C--SEEC--C--CTTSSSEEEEEEEETTTTEEEEEETTCSS
T ss_pred             EEEEEECCCCCcEEEecCCCCCcCCEEecCCCC-C--CEEE--C--CCCcCccceEEEEeCCCCEEEEeeCCCCC
Confidence            366776664  56666533     389999754 3  3333  2  3469999999999754   9998333333

>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Polynucleotide kinase 3'-phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.46  E-value=0.04  Score=46.90  Aligned_cols=39  Identities=26%  Similarity=0.181  Sum_probs=27.2

Q ss_pred             EeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc---eeEE
Q 004452          699 HYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS---LFIK  746 (753)
Q Consensus       699 y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---FyI~  746 (753)
                      .......++|||+. +  .+|+.      .+|||+||.|..+.+   +||+
T Consensus        17 l~~~~~~~~iGR~~-~--~~i~d------~~vSr~Ha~i~~~~~~~~~~v~   58 (101)
T d2brfa1          17 LPSDGQALVLGRGP-L--TQVTD------RKCSRTQVELVADPETRTVAVK   58 (101)
T ss_dssp             CCSTTCCEEECSBT-T--TTBCC------TTSCSSCEEEEEETTTTEEEEE
T ss_pred             EecCCCeEEcccCc-c--ccccC------CCcChhheEEEeccCceeEEEE
Confidence            34456789999964 2  33432      579999999998643   6666

>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinesin-like protein kif1c
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=0.084  Score=44.28  Aligned_cols=43  Identities=19%  Similarity=0.179  Sum_probs=32.2

Q ss_pred             ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeecc--c---eeEE
Q 004452          696 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVK--S---LFIK  746 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~--d---FyI~  746 (753)
                      ...|+++..+.+|||..    -||=|  .|+  .|||+||+|+...  +   +||.
T Consensus        16 ~~~y~l~~~~~~iGr~~----~dI~l--~~~--~vs~~Ha~i~~~~~~~~~~~~i~   63 (102)
T d2g1la1          16 CLLYHIKDGVTRVGQVD----MDIKL--TGQ--FIREQHCLFRSIPQPDGEVVVTL   63 (102)
T ss_dssp             CCEEECCSEEEEEESSS----CSEEC--CCT--TCCSEEEEEEEEECTTSCEEEEE
T ss_pred             eEEEEcCCCcEECCCCC----cCEEe--ccc--ceeeeeeEEEEEEcCCCcEEEEe
Confidence            46799999999999953    45656  343  5999999998742  2   6666

>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Afadin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.15  E-value=0.092  Score=44.78  Aligned_cols=46  Identities=13%  Similarity=0.049  Sum_probs=35.7

Q ss_pred             ceeEeeecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          696 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       696 ~~~y~mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      -..|+++...++|||.-.. ..||=|  .|+  .|||+||.|....+ +||+
T Consensus        21 ~~~~~l~~~~~~iG~~rs~-~~dI~L--~~~--~Vs~~Ha~i~~~~~~~~l~   67 (107)
T d1wlna1          21 PKLYRLQLSVTEVGTEKFD-DNSIQL--FGP--GIQPHHCDLTNMDGVVTVT   67 (107)
T ss_dssp             CCEEECCSEEEECSSSCCS-TTCCCC--CCT--TCCSSCEEEEESSSCEEEE
T ss_pred             cEEEEECCCCEEECCCCCC-CCcEEE--CCc--ceeeeEEEEEEcccccEEe
Confidence            4679999999999985332 245555  454  49999999999988 8888

>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Phosphotyrosine binding domain of Rad53
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.58  E-value=0.079  Score=46.50  Aligned_cols=40  Identities=18%  Similarity=0.260  Sum_probs=27.6

Q ss_pred             eecCeEEEccCCCCCccceecCCCCCCccccccceEEeeccc-eeEE
Q 004452          701 IKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQVYNVFVKS-LFIK  746 (753)
Q Consensus       701 mr~~eIviGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-FyI~  746 (753)
                      ..+...+|||+..   .||-|.   ....|||+||.|.++.+ +|+.
T Consensus        33 ~~~~~~~iGR~~~---~d~~l~---d~~~VSr~Ha~i~~~~~~~~~~   73 (127)
T d1g6ga_          33 SIKKVWTFGRNPA---CDYHLG---NISRLSNKHFQILLGEDGNLLL   73 (127)
T ss_dssp             SCCEEEEEESSTT---SSEECC---SCTTSCSSCEEEEECTTSCEEE
T ss_pred             cCCccEEEccCcc---cCccCC---CcchhhHHHHHeeecccEEEEE
Confidence            3445679999753   455552   23579999999999877 4443