Citrus Sinensis ID: 004479
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 750 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M3H5 | 819 | Probable cadmium/zinc-tra | yes | no | 0.889 | 0.814 | 0.817 | 0.0 | |
| Q60048 | 711 | Probable cadmium-transpor | yes | no | 0.825 | 0.870 | 0.282 | 2e-73 | |
| P58414 | 707 | Probable cadmium-transpor | yes | no | 0.689 | 0.731 | 0.288 | 4e-70 | |
| P20021 | 727 | Probable cadmium-transpor | yes | no | 0.721 | 0.744 | 0.286 | 2e-68 | |
| Q6GIX1 | 726 | Probable cadmium-transpor | yes | no | 0.72 | 0.743 | 0.285 | 5e-68 | |
| P37386 | 804 | Probable cadmium-transpor | yes | no | 0.72 | 0.671 | 0.287 | 1e-66 | |
| P30336 | 723 | Probable cadmium-transpor | no | no | 0.753 | 0.781 | 0.270 | 4e-66 | |
| O31688 | 637 | Zinc-transporting ATPase | yes | no | 0.718 | 0.846 | 0.293 | 3e-61 | |
| Q59998 | 721 | Zinc-transporting ATPase | N/A | no | 0.826 | 0.859 | 0.294 | 3e-59 | |
| O32219 | 702 | Cadmium, zinc and cobalt- | no | no | 0.737 | 0.787 | 0.283 | 5e-58 |
| >sp|Q9M3H5|HMA1_ARATH Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis thaliana GN=HMA1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/668 (81%), Positives = 602/668 (90%), Gaps = 1/668 (0%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFL 142
S PQK + FAKA W+ LAN+LREHL LCC AAA+FLAAA CPYL P+P IK LQNAF+
Sbjct: 100 SKPQKMLFGFAKAIGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFM 159
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 160 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 219
Query: 203 EFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ PDS L++ V + N+P++SDL+Y+SVPVH VEVGSY+LVG GE
Sbjct: 220 EFFTSRSMVDVKELKESNPDSALLIEVHNGNVPNISDLSYKSVPVHSVEVGSYVLVGTGE 279
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCEVYQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 280 IVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 339
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSKVVVVLSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 340 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 399
Query: 383 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG QVLDALASCHTIAFDKTGTLT
Sbjct: 400 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLT 459
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + I+CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 460 TGGLTCKAIEPIYGHQ-GGTNSSVITCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 518
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG+++ E + KASLGS++FITSL KSEDES++I
Sbjct: 519 GKDLPSIFVESFEYFPGRGLTATVNGVKTVAEESRLRKASLGSIEFITSLFKSEDESKQI 578
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN SSYG+ FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 579 KDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 638
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LKPEDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 639 SSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 698
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQNVALAL+ I LA+LPSVLG
Sbjct: 699 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLG 758
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 759 FVPLWLTV 766
|
Involved in cadmium/zinc transport. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 5 |
| >sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes GN=cadA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/670 (28%), Positives = 338/670 (50%), Gaps = 51/670 (7%)
Query: 85 PQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFLAV 144
P+K F + D +F+R++ +L + LF+A ++ L NA
Sbjct: 67 PEKE--SFTDPEHFTDHQSFIRKNWRLLL--SGLFIAVGYASQIMNGEDFY-LTNALFIF 121
Query: 145 AFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEF 204
A + G S + ++ + + LM A + F+G EG +++ +F ++ E +
Sbjct: 122 AIFIGGYSLFKEGFKNLLKFEFTMETLMTIAIIGAAFIGEWAEGSIVVILFAVSEALERY 181
Query: 205 FTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAV 264
+A ++ L + P LV D R V V D+++G +++ G+ +
Sbjct: 182 SMDKARQSIRSLMDIAPKEALVRRSGTD----------RMVHVDDIQIGDIMIIKPGQKI 231
Query: 265 PVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRI 324
+D V +G + + +TGE P+E + D + G N +G + + TK ++T+++I
Sbjct: 232 AMDGHVVKGYSAVNQAAITGESIPVEKNIDDSVFAGTLNEEGLLEVAVTKRVEDTTISKI 291
Query: 325 VQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYR 384
+ L EEAQ + Q ++D F + Y+ ++V++ IA + P LF ++ VY+
Sbjct: 292 IHLVEEAQGERAPAQAFVDTFAKYYTPAIIVIAALIATVPPLLFGGNW------ETWVYQ 345
Query: 385 ALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTT 443
L ++V PCAL V+ P+A TAI + A+ G+L+KGG L+ + IAFDKTGTLT
Sbjct: 346 GLSVLVVGCPCALVVSTPVAIVTAIGNAAKNGVLVKGGVYLEEIGGLKAIAFDKTGTLTK 405
Query: 444 GGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIG 503
G P+ +I + +I + + AA+E+ + HP+ A++ +
Sbjct: 406 G-------VPVVTDYIELTEATNIQ------HNKNYIIMAALEQLSQHPLASAIIKYGET 452
Query: 504 K--DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRK 561
+ DL S++++ F G+G+ TV+G + G L L + F S+ + + +
Sbjct: 453 REMDLTSINVNDFTSITGKGIRGTVDG-NTYYVGSPVLFKELLASQFTDSIHRQVSDLQL 511
Query: 562 IKEAVNGSSYGRGFVHAALSVNEK-VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGD 620
+G N+K ++++ + D R VI L + + +MLTGD
Sbjct: 512 -----------KGKTAMLFGTNQKLISIVAVADEVRSSSQHVIKRLHELGIEKTIMLTGD 560
Query: 621 HESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVG 680
++++AQ + VG++E+ L P+DKL+++K+ + G + MVG+GINDAPALAAATVG
Sbjct: 561 NQATAQAIGQQVGVSEIEGELMPQDKLDYIKQLKINFGK-VAMVGDGINDAPALAAATVG 619
Query: 681 IVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV 740
I + + TAI ADV L+ +++ +PF V SR+T ++KQN+ +L ++A L +
Sbjct: 620 IAMGGAGTDTAIETADVALMGDDLQKLPFTVKLSRKTLQIIKQNITFSLVIKLIALLLVI 679
Query: 741 LGFLPLWLTV 750
G+L LW+ +
Sbjct: 680 PGWLTLWIAI 689
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes (taxid: 1639) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 266 bits (681), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 296/569 (52%), Gaps = 52/569 (9%)
Query: 187 EGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVP 246
EG +++ +F + + E + +A ++ L + P L+ D + + +
Sbjct: 164 EGSIVVILFAFSEVLERYSMDKARQSIRSLMDIAPKEALIRRDDVEQM----------IA 213
Query: 247 VHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDG 306
V D+++G +++ G+ + +D V +G + I +TGE P+E KV D + G N +G
Sbjct: 214 VSDIQIGDIMIIKPGQKIAMDGVVIKGYSAINQSAITGESIPVEKKVDDEVFAGTLNEEG 273
Query: 307 RMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPF 366
+ +K TK ++T+++I+ L EEAQ + Q ++D+F + Y+ +++++L + ++ P
Sbjct: 274 LLEVKVTKHVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPTIMLIALLVVVVPPL 333
Query: 367 LF--KWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQV 423
F W VY+ L L+V PC+L ++ P++ +AI + A+ G+L+KGG
Sbjct: 334 FFGGDWD--------TWVYQGLSLLVVGCPCSLVISTPVSIVSAIGNSAKNGVLVKGGIY 385
Query: 424 LDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAA 483
L+ + IAFDKTGTLT G +P+ +I + D E+ +L++
Sbjct: 386 LEEIGGLQAIAFDKTGTLTKG-------KPVVTDFIPYSEHMD--------EQNSLSIIT 430
Query: 484 AMEKGTTHPIGRAVVDHSI--GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKA 541
A+E + HP+ A++ ++ D S+ ID F G+G+ VNGI K ++
Sbjct: 431 ALETMSQHPLASAIISKAMIDNVDYKSIEIDNFSSITGKGVKGEVNGITYYIGSSKLFES 490
Query: 542 SLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSD 601
SL I+ +S K+ +G + + + +I + D R +
Sbjct: 491 SLEKSQSISQTYQSLQ-----KQGKTAMLFG--------TESNILAIIAVADEVRESSKE 537
Query: 602 VIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGL 661
VIA+L +MLTGD+ +AQ + +G++++ L PEDKL ++K + G +
Sbjct: 538 VIAQLHKLGIAHTIMLTGDNNDTAQFIGKEIGVSDIKAELMPEDKLTYIKELKQTYGK-V 596
Query: 662 IMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLV 721
M+G+G+NDAPALAA+TVGI + + TA+ ADV L+ +++ +PF V SR+T ++
Sbjct: 597 AMIGDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLKKLPFIVNLSRKTLKII 656
Query: 722 KQNVALALSCIILASLPSVLGFLPLWLTV 750
KQN+ +L +LA L + G+L LW+ +
Sbjct: 657 KQNITFSLGIKLLALLLVLPGWLTLWIAI 685
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P20021|CADA1_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 298/587 (50%), Gaps = 46/587 (7%)
Query: 167 NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLV 226
++ LM A + +G E +++ +F ++ E F R+ ++ L + P LV
Sbjct: 161 DMKTLMTVAVIGATIIGKWAEASIVVILFAISEALERFSMDRSRQSIRSLMDIAPKEALV 220
Query: 227 LNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEV 286
+ + V D+A VG ++V GE + +D + G + + +TGE
Sbjct: 221 RRNGQEIIIHVDDIA----------VGDIMIVKPGEKIAMDGIIVNGLSAVNQAAITGES 270
Query: 287 KPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346
P+ V D + G N +G + +K TK ++T+ +I+ L EEAQ + Q ++D+F
Sbjct: 271 VPVSKAVDDEVFAGTLNEEGLIEVKITKYVEDTTITKIIHLVEEAQGERAPAQAFVDKFA 330
Query: 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYA 405
+ Y+ +++V++ +A++ P F S+ VY+ L ++V PCAL ++ P++
Sbjct: 331 KYYTPIIMVIAALVAVVPPLFFGGSW------DTWVYQGLAVLVVGCPCALVISTPISIV 384
Query: 406 TAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTH 465
+AI + A+KG+L+KGG L+ L + T+AFDKTGTLT G + E +
Sbjct: 385 SAIGNAAKKGVLVKGGVYLEKLGAIKTVAFDKTGTLTKGVPVVTDFEVLNDQV------- 437
Query: 466 DISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLP--SVSIDRFEYFPGRGLT 523
EKE ++ A+E + HP+ A++ + ++P +V ++ F GRG+
Sbjct: 438 --------EEKELFSIITALEYRSQHPLASAIMKKAEQDNIPYSNVQVEEFTSITGRGIK 489
Query: 524 ATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVN 583
VNG G +L L DF + + KI + ++ G L V
Sbjct: 490 GIVNGTTYYI-GSPKLFKELNVSDFSLGF----ENNVKILQNQGKTAMIIGTEKTILGV- 543
Query: 584 EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKP 643
I + D R +VI +L + +MLTGD++ +A + VG++++ L P
Sbjct: 544 -----IAVADEVRETSKNVIQKLHQLGIKQTIMLTGDNQGTANAIGTHVGVSDIQSELMP 598
Query: 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703
+DKL+++K+ + + M+G+G+NDAPALAA+TVGI + + TAI AD+ L+ ++
Sbjct: 599 QDKLDYIKKMQSEYDN-VAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDD 657
Query: 704 ISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
+S +PF V SR+T +++K N+ A+ I+A L + G+L LW+ +
Sbjct: 658 LSKLPFAVRLSRKTLNIIKANITFAIGIKIIALLLVIPGWLTLWIAI 704
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 304/588 (51%), Gaps = 48/588 (8%)
Query: 167 NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLV 226
++ LM A + +G E +++ +F ++ E F RA ++ L + P LV
Sbjct: 160 DMKTLMTVAVIGAAIIGEWAEASIVVVLFAISEALERFSMDRARQSIRSLMDIAPKEALV 219
Query: 227 LNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEV 286
+ + + + V D+ VG ++V GE + +D + G + + +TGE
Sbjct: 220 MRNGQEIM----------IHVDDIAVGDIMIVKPGEKIAMDGIIINGVSAVNQAAITGES 269
Query: 287 KPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346
P+ V D + G N +G + +K TK ++T+++I+ L EEAQ + Q ++D+F
Sbjct: 270 VPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQGERAPAQAFVDKFA 329
Query: 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYA 405
+ Y+ +++V++ +A++ P F S+ VY+ L ++V PCAL ++ P++
Sbjct: 330 KYYTPIIMVIAALVAVVPPLFFGGSW------DTWVYQGLAVLVVGCPCALVISTPISIV 383
Query: 406 TAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTH 465
+AI + A+KG+L+KGG L+ L + IAFDKTGTLT G P+ + K +
Sbjct: 384 SAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKG-------VPVVTDF---KVLN 433
Query: 466 DISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL--PSVSIDRFEYFPGRGLT 523
D EKE ++ A+E + HP+ A++ + ++ V ++ F GRG+
Sbjct: 434 D-----QVEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVEDFTSITGRGIQ 488
Query: 524 ATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVN 583
++G G L L DF S + K+K N +G + +
Sbjct: 489 GNIDGTTYYI-GSPRLFKELNVSDF------SLEFENKVKVLQN-----QGKTAMIIGTD 536
Query: 584 EKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLK 642
+ + +I + D R +VI +L + +MLTGD++ +A+ + VG++++ L
Sbjct: 537 QTILGVIAVADEVRETSKNVIQKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSDIQSELM 596
Query: 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRN 702
P+DKL+++K+ + G + M+G+G+NDAPALAA+TVGI + + TAI AD+ L+ +
Sbjct: 597 PQDKLDYIKKMKAEHGN-VAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGD 655
Query: 703 NISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
++S +PF V SR+T +++K N+ A+ I+A L + G+L LW+ +
Sbjct: 656 DLSKLPFAVRLSRKTLNIIKANITFAIGIKIIALLLVIPGWLTLWIAI 703
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/588 (28%), Positives = 301/588 (51%), Gaps = 48/588 (8%)
Query: 167 NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLV 226
++ LM A + +G E +++ +F ++ E F RA ++ L + P LV
Sbjct: 238 DMKTLMTVAVIGAAIIGEWAEASIVVILFAISEALERFSMDRARQSIRSLMDIAPKEALV 297
Query: 227 LNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEV 286
+ + V D+A VG ++V GE + +D + G + + +TGE
Sbjct: 298 RRNGQEIMIHVDDIA----------VGDIMIVKPGEKIAMDGIIINGVSAVNQAAITGES 347
Query: 287 KPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346
P+ V D + G N +G + +K TK ++T+++I+ L EEAQ + Q ++D+F
Sbjct: 348 VPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQGERAPAQAFVDKFA 407
Query: 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYA 405
+ Y+ +++V++ +A++ P F S+ VY+ L ++V PCAL + P++
Sbjct: 408 KYYTPIIMVIAALVAVVPPLFFGGSW------DTWVYQGLAVLVVGCPCALVITTPISIV 461
Query: 406 TAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTH 465
+AI + A+KG+L+KGG L+ L + IAFDKTGTLT G P+ + K +
Sbjct: 462 SAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKG-------VPVVTDF---KVLN 511
Query: 466 DISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL--PSVSIDRFEYFPGRGLT 523
D EKE ++ A+E + HP+ A++ + ++ V + F GRG+
Sbjct: 512 D-----QVEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVKDFTSITGRGIQ 566
Query: 524 ATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVN 583
++G G L L DF S + K+K N +G + +
Sbjct: 567 GNIDGTTYYI-GSPRLFKELNVSDF------SLEFENKVKVLQN-----QGKTAMIIGTD 614
Query: 584 EKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLK 642
+ + +I + D R +VI +L + +MLTGD++ +A+ + VG++++ L
Sbjct: 615 QTILGVIAVADEVRETSKNVILKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSDIQSELL 674
Query: 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRN 702
P+DKL+++K+ + G + M+G+G+NDAPALAA+TVGI + + TAI AD+ L+ +
Sbjct: 675 PQDKLDYIKKMKAEHGN-VAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGD 733
Query: 703 NISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
++S +PF V SR+T +++K N+ A+ I+A L + G+L LW+ +
Sbjct: 734 DLSKLPFAVRLSRKTLNIIKANITFAIGIKIIALLLVIPGWLTLWIAI 781
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P30336|CADA_BACPE Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus (strain OF4) GN=cadA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 166/614 (27%), Positives = 317/614 (51%), Gaps = 49/614 (7%)
Query: 141 FLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHI 200
FLA F + G+S L ++ + ++ LM A +G E +++ +F ++
Sbjct: 133 FLASMF-IGGLSLFKVGLQNLLRFEFDMKTLMTVAVIGGAIIGEWAEVAIVVILFAISEA 191
Query: 201 AEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGA 260
E F RA ++ L + P LV + + V D+A VG ++V
Sbjct: 192 LERFSMDRARQSIRSLMDIAPKEALVKRNGQEIMIHVDDIA----------VGDIMIVKP 241
Query: 261 GEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNEST 320
G+ + +D V G + + +TGE P+E V + + G N +G + ++ TK ++T
Sbjct: 242 GQKIAMDGVVVSGYSAVNQAAITGESVPVEKTVDNEVFAGTLNEEGLLEVEITKLVEDTT 301
Query: 321 LNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRG 380
+++I+ L EEAQ + Q ++D+F + Y+ ++++++ +A++ P F S+
Sbjct: 302 ISKIIHLVEEAQGERAPSQAFVDKFAKYYTPIIMIIAALVAIVPPLFFDGSW------ET 355
Query: 381 SVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTG 439
+Y+ L ++V PCAL ++ P++ +AI + A+KG+L+KGG L+ + + IAFDKTG
Sbjct: 356 WIYQGLAVLVVGCPCALVISTPISIVSAIGNAAKKGVLVKGGVYLEEMGALKAIAFDKTG 415
Query: 440 TLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVD 499
TLT G + + + + +K+ + EKE L++ A+E + HP+ A++
Sbjct: 416 TLTKG------VPAVTDYNVLNKQIN---------EKELLSIITALEYRSQHPLASAIMK 460
Query: 500 HSIGKDL--PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED 557
+ +++ V ++ F G+G+ VNG +GS L + D
Sbjct: 461 KAEEENITYSDVQVEDFSSITGKGIKGIVNGT----------TYYIGSPKLFKELL-TND 509
Query: 558 ESRKIKEAVNGSSYGRGFVHAALSVNEKV-TLIHLEDRPRPGVSDVIAELKDHARLRVMM 616
+ +++ V + +G + +++ +I + D R +++ +L + +M
Sbjct: 510 FDKDLEQNVT-TLQNQGKTAMIIGTEKEILAVIAVADEVRESSKEILQKLHQLGIKKTIM 568
Query: 617 LTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA 676
LTGD++ +A + VG++++ L P+DKL+ +K+ R G + MVG+G+NDAPALAA
Sbjct: 569 LTGDNKGTANAIGGQVGVSDIEAELMPQDKLDFIKQL-RSEYGNVAMVGDGVNDAPALAA 627
Query: 677 ATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILAS 736
+TVGI + + TA+ ADV L+ +++ +PF V SR+T +++K N+ A++ +A
Sbjct: 628 STVGIAMGGAGTDTALETADVALMGDDLRKLPFTVKLSRKTLNIIKANITFAIAIKFIAL 687
Query: 737 LPSVLGFLPLWLTV 750
L + G+L LW+ +
Sbjct: 688 LLVIPGWLTLWIAI 701
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Bacillus pseudofirmus (strain OF4) (taxid: 398511) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|O31688|ZOSA_BACSU Zinc-transporting ATPase OS=Bacillus subtilis (strain 168) GN=zosA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/596 (29%), Positives = 295/596 (49%), Gaps = 57/596 (9%)
Query: 144 VAFPLVGVSASLDALTDIAGGK-VNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
+AF + G + + + + + K +N+ +LM FAA S +G EG +L+ +F+L+ E
Sbjct: 59 LAFVIGGFAKAKEGIEETLESKTLNVELLMIFAAIGSALIGYWAEGAILIFIFSLSGALE 118
Query: 203 EFFTSRAMVDVKELKENYPD-SVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAG 261
+ +++ D+ L + P+ + L++N + + VPV D++ G I++ G
Sbjct: 119 TYTMNKSSRDLTSLMQLEPEEATLMVNGET-----------KRVPVSDLQAGDMIVIKPG 167
Query: 262 EAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTL 321
E V D + G+ ++ LTGE P+E GD + G N +G + ++ TK +S
Sbjct: 168 ERVAADGIIESGSTSLDESALTGESMPVEKNTGDTVFTGTVNRNGSLTVRVTKANEDSLF 227
Query: 322 NRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGP-FLFKWSFIGTSVCRG 380
+I++L E AQ + Q +++ F Y K V++ ++A+ L P F WS+ T
Sbjct: 228 RKIIKLVESAQNSVSPAQAFIERFENAYVKGVLI-AVALLLFVPHFALGWSWSET----- 281
Query: 381 SVYRALGLMVAASPCALAVAPL-AYATAISSCARKGILLKGGQVLDALASCHTIAFDKTG 439
YRA+ MV ASPCAL + + A + IS+ AR G+L+KG L+ L S IAFDKTG
Sbjct: 282 -FYRAMVFMVVASPCALVASIMPAALSLISNGARNGMLVKGSVFLEQLGSVQMIAFDKTG 340
Query: 440 TLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVD 499
T+T G + I G E E L A+E ++HP+ +A+
Sbjct: 341 TVTKGQPAVETIRIAEGF----------------SEAEVLEAVYAIETQSSHPLAQAITA 384
Query: 500 HSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDES 559
++ + + E G G+ A V+G K +G FI E+ +
Sbjct: 385 YAESRGVNQSGYISIEETSGFGVMAEVSGA----------KWKVGKAGFI-----GEEMA 429
Query: 560 RKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLT 618
+ + G + ++++ I L+D+ RP +V+ EL + ++ MLT
Sbjct: 430 AQFMKQTASDVIQSGHTIVFVKKDDQIAGCIALKDQIRPEAKEVMEEL-NRLGIKTAMLT 488
Query: 619 GDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAAT 678
GDHE +AQ +A G+ V P+ K+N +KR + G + MVG+GINDAPAL AA
Sbjct: 489 GDHEDTAQAIAKEAGMTTVVAECLPDQKVNEIKRLKEEF-GTIAMVGDGINDAPALKAAD 547
Query: 679 VGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIIL 734
VGI + + A+ AD++L++N++ + SR+ ++KQN+ +L+ I L
Sbjct: 548 VGIAMGG-GTDVALETADMVLMKNDLKKLVNMCRLSRKMNRIIKQNIVFSLAVICL 602
|
Couples the hydrolysis of ATP with the transport of zinc into the cell. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|Q59998|ATZN_SYNY3 Zinc-transporting ATPase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ziaA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 208/707 (29%), Positives = 317/707 (44%), Gaps = 87/707 (12%)
Query: 55 CLSHPHINHQHHYHDHHHHHRHNDCSELSGPQKAVIKFAKATRWLDLANF-LREHLQLCC 113
L+ P + + H H H HR S G F L++ L
Sbjct: 72 TLAEPKSSVTLNGHKHPHSHREEGHSHSHGA----------------GEFNLKQELLPVL 115
Query: 114 CAAALFLAAAACPYLLPKPA-IKPLQNAFLAVAFP---LVGVSASLDALTDIAGGKV-NI 168
A ALF A L +P P Q A AV P L G + A +I G++ +
Sbjct: 116 TAIALFTIA----ILFEQPLHNTPGQIAEFAVIIPAYLLSGWTVLKTAGRNILRGQIFDE 171
Query: 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLN 228
+ LM A ++ + E ++ F + + +E+ R+ +K L E PD+
Sbjct: 172 NFLMTIATLGALAIHQLPEAVAVMLFFRVGELFQEYSVGRSRRSIKALLEARPDTA---- 227
Query: 229 VDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKP 288
NL + + V V+V ILV GE VP+D E+ GT+ + LTGE P
Sbjct: 228 ----NLK--RNGTVQQVSPETVQVDDLILVKPGEKVPLDGEILGGTSQVDTSALTGESVP 281
Query: 289 LEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQ 348
K GD I G N G + ++ TK ++ES++ +++ L E A K ++++ +F
Sbjct: 282 GTVKPGDTILAGMINQSGVLTIRVTKLFSESSIAKVLDLVENASSKKASTEKFITQFARY 341
Query: 349 YSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATA 407
Y+ V+V LSLA+AL+ P FI + VYRAL L+V + PC L ++ PL Y
Sbjct: 342 YTPVIVFLSLAVALLPPL-----FIPGADRADWVYRALVLLVISCPCGLVISIPLGYFGG 396
Query: 408 ISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDI 467
I A+ GIL+KG LD+L + T+ FDKTGTLT G FK + + +
Sbjct: 397 IGGAAKHGILIKGSTFLDSLTAVKTVVFDKTGTLTKG--TFKVTQVVTKNGF-------- 446
Query: 468 SCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVN 527
E E L +AA E +THPI ++ + + + + + +E G G+ A V
Sbjct: 447 ------SESELLTLAAKAESHSTHPIALSIRE-AYAQSIADSEVADYEEIAGHGIRAVVQ 499
Query: 528 GIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT 587
G + +D T C + + AV+G YG G++ A + E
Sbjct: 500 --NQVVIAGNDRLLHREKIDHDT--C--DVAGTVVHLAVDG-RYG-GYILIADEIKE--- 548
Query: 588 LIHLEDRPRPGVSDVIAELKDHARL---RVMMLTGDHESSAQRVANAVGINEVYCSLKPE 644
D + ++D R+ + +MLTGD E AQ VA +G++ L PE
Sbjct: 549 -------------DAVQAIRDLKRMGVEKTVMLTGDSEIVAQSVAQQIGLDAFVAELLPE 595
Query: 645 DKLNHVKRTSRDMG-GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703
+K++ +++ G L VG+GINDAP +A A VGI + S AI ADV+L+ +
Sbjct: 596 EKVDEIEQLLDPSGKAKLAFVGDGINDAPVIARADVGIAMGGLGSDAAIETADVVLMTDA 655
Query: 704 ISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
S V + +R+T +V QN+ LAL L +G LW V
Sbjct: 656 PSKVAEAIHVARKTRQIVVQNIVLALGIKALFIALGTIGLATLWEAV 702
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|O32219|CADA_BACSU Cadmium, zinc and cobalt-transporting ATPase OS=Bacillus subtilis (strain 168) GN=cadA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 284/610 (46%), Gaps = 57/610 (9%)
Query: 145 AFPLVGVSASLDALTDIAGGKV-NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEE 203
A+ ++G + A+ +I G+V + H LMA A + + EG ++ + + + +
Sbjct: 123 AYLIIGGDIIIRAVKNIIRGQVFDEHFLMALATIGAFLIQQYPEGVAVMLFYQIGELFQG 182
Query: 204 FFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEA 263
SR+ + L + PD N+ N V DV+ G I+V GE+
Sbjct: 183 AAVSRSRKSISALMDIRPDYA---NLKTKN-------GIEQVSSEDVQTGDIIVVNPGES 232
Query: 264 VPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNR 323
+P+D +V QG+A + LTGE P +A G + G N +G + ++ TK + ES +++
Sbjct: 233 IPLDGKVVQGSAMVDTSALTGESVPRKAAEGQDVMSGFINQNGVLHIEVTKGYQESAVSK 292
Query: 324 IVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVY 383
I+ L + A K + + ++ +F + Y+ VV++++ +A + P + + + VY
Sbjct: 293 ILDLVQNASSRKARTENFITKFAKYYTPAVVIIAVLLAFVPPLV-----LSGAALSDWVY 347
Query: 384 RALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
RAL +V + PCAL V+ PL + I + ++ G+L+KG L+AL FDKTGTLT
Sbjct: 348 RALIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVKYAVFDKTGTLT 407
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
G I+P G T D L AA E + HPI + V +
Sbjct: 408 KGSFEVTEIKPAEGF------TKD----------RLLEAAAYAELHSQHPIAES-VRKAY 450
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GK L S I+ +E G G+ A VNG E G K+L R+
Sbjct: 451 GKMLSSDEIESYEEISGHGIFAKVNGTEI-LAGNKKLM------------------EREQ 491
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
E V + G VH A+ +I + D + + +A+LK + MLTGD +
Sbjct: 492 IEDVPDENAGT-IVHVAVDQRYAGAII-IADEIKEDAAQAVADLKSLGIKQTAMLTGDSK 549
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM--GGGLIMVGEGINDAPALAAATVG 680
+ + V +GI EVY L P+DK+ V+ + LI VG+GIND P LA A +G
Sbjct: 550 QTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLLPSEKLIFVGDGINDTPVLARADIG 609
Query: 681 IVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV 740
+ + S A+ AD++L+ + S + + +++T +V QN+ AL + +
Sbjct: 610 VAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKRTRRIVWQNIGFALGVKAIFLILGA 669
Query: 741 LGFLPLWLTV 750
G +W V
Sbjct: 670 FGIATMWEAV 679
|
Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell. Does not seem to transport copper. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 750 | ||||||
| 255567899 | 820 | heavy metal cation transport atpase, put | 0.994 | 0.909 | 0.776 | 0.0 | |
| 356565533 | 817 | PREDICTED: probable cadmium/zinc-transpo | 0.894 | 0.821 | 0.819 | 0.0 | |
| 224094264 | 825 | heavy metal ATPase [Populus trichocarpa] | 0.978 | 0.889 | 0.727 | 0.0 | |
| 225438839 | 829 | PREDICTED: probable cadmium/zinc-transpo | 0.894 | 0.809 | 0.797 | 0.0 | |
| 15235511 | 819 | putative cadmium/zinc-transporting ATPas | 0.889 | 0.814 | 0.817 | 0.0 | |
| 7710954 | 819 | putative metal ATPase [Arabidopsis thali | 0.889 | 0.814 | 0.815 | 0.0 | |
| 63253545 | 819 | chloroplast heavy metal P-type ATPase pr | 0.889 | 0.814 | 0.814 | 0.0 | |
| 297798152 | 826 | hypothetical protein ARALYDRAFT_490893 [ | 0.889 | 0.807 | 0.815 | 0.0 | |
| 449468396 | 823 | PREDICTED: probable cadmium/zinc-transpo | 0.897 | 0.817 | 0.802 | 0.0 | |
| 449484083 | 824 | PREDICTED: probable cadmium/zinc-transpo | 0.897 | 0.816 | 0.798 | 0.0 |
| >gi|255567899|ref|XP_002524927.1| heavy metal cation transport atpase, putative [Ricinus communis] gi|223535762|gb|EEF37424.1| heavy metal cation transport atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/766 (77%), Positives = 665/766 (86%), Gaps = 20/766 (2%)
Query: 1 METTLLHSTIHVASFPSPTRSIR----LKRVNSLKPTLSFTHPVIRFNFKPLNYRPVNCL 56
METT L I V FPS + S + +R SL +LS I NF + R V C
Sbjct: 1 METTALRHAIGVKGFPSVSYSSKQLAITRRRRSLD-SLSLIFRPISLNF---HNRTVRCT 56
Query: 57 SHPHINHQHHYHDHHHHHRH------------NDCSELSGPQKAVIKFAKATRWLDLANF 104
+H +H HH+H +H+HH H D ELSGPQ+A+I FAKA +W+DLAN
Sbjct: 57 AHSKNHHDHHHHHNHNHHHHHHHHHHHHNHSHGDVEELSGPQRALINFAKAVKWIDLANL 116
Query: 105 LREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGG 164
LRE+LQLCCC+AALF+AAAACPYL+P P +KP+QNAF+ VAFPLVGVSASLDALTD+ GG
Sbjct: 117 LRENLQLCCCSAALFVAAAACPYLIPNPVVKPIQNAFIIVAFPLVGVSASLDALTDVTGG 176
Query: 165 KVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSV 224
KVNIHVLMA AAF+S+FMGN+LEGGLLLAMFNLAHIAEEFFTSR+MVDVKELKE++PDS
Sbjct: 177 KVNIHVLMALAAFSSVFMGNALEGGLLLAMFNLAHIAEEFFTSRSMVDVKELKESHPDSA 236
Query: 225 LVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTG 284
LVL+V+D+ LPD+SDL+Y S+PVHDV+VGS+ILVG GEAVPVDCEV+QG ATITIEHLTG
Sbjct: 237 LVLDVNDEKLPDLSDLSYESIPVHDVKVGSFILVGTGEAVPVDCEVFQGRATITIEHLTG 296
Query: 285 EVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDE 344
E+KP+E KVGDRIPGGARNLDGR+I+KATK W ESTLNRIVQLTEEAQLNKPKLQRWLDE
Sbjct: 297 EIKPVEIKVGDRIPGGARNLDGRIIVKATKMWKESTLNRIVQLTEEAQLNKPKLQRWLDE 356
Query: 345 FGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVAPLAY 404
FGE YSKVVV LS+A+AL+GPFLF W FIGTS CRGSVYRALGLMVAASPCALAVAPLAY
Sbjct: 357 FGEHYSKVVVGLSIAVALLGPFLFNWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAY 416
Query: 405 ATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT 464
A AISSCARKGILLKGGQVLDAL+SCHTIAFDKTGTLTTGGLMFKAIEP++GH + +K T
Sbjct: 417 AIAISSCARKGILLKGGQVLDALSSCHTIAFDKTGTLTTGGLMFKAIEPLFGHELVNKNT 476
Query: 465 HDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTA 524
+ SCCIP+CEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLP VS++ FE FPGRGLTA
Sbjct: 477 NFTSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPFVSVESFECFPGRGLTA 536
Query: 525 TVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNE 584
T+N IES T K LKASLGS++FITSLCKSEDESRKIK+AV SSYG FVHAALSVN+
Sbjct: 537 TLNNIESATGRVKLLKASLGSIEFITSLCKSEDESRKIKDAVKASSYGSDFVHAALSVND 596
Query: 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPE 644
KVTLIHLEDRPR GVSDVIAEL+D ARLRVMMLTGDHESSA RVA +VGI+EV+ SLKPE
Sbjct: 597 KVTLIHLEDRPRAGVSDVIAELEDRARLRVMMLTGDHESSAWRVAKSVGISEVHYSLKPE 656
Query: 645 DKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNI 704
DKLNHVK +RDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD+LLLR++I
Sbjct: 657 DKLNHVKGITRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADILLLRDDI 716
Query: 705 SGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
SG+PFC+AKSRQTTSLVKQNVALAL+CI+LASLPSVLGFLPLWLTV
Sbjct: 717 SGIPFCIAKSRQTTSLVKQNVALALTCIVLASLPSVLGFLPLWLTV 762
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565533|ref|XP_003550994.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/672 (81%), Positives = 612/672 (91%), Gaps = 1/672 (0%)
Query: 80 SELSGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQN 139
+ L+GPQKAVI FAKATRW+DLA+ LREHL LCC + ALF+AAA CP+ LPKP +KPLQN
Sbjct: 88 ANLTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVKPLQN 147
Query: 140 AFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAH 199
+ + VAFPLVGVSASLDAL +I+ GKVNIHVLMA AAFASIFMGNSLEGGLLLAMFNLAH
Sbjct: 148 SLIFVAFPLVGVSASLDALIEISSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAH 207
Query: 200 IAEEFFTSRAMVDVKELKENYPDSVLVLNV-DDDNLPDVSDLAYRSVPVHDVEVGSYILV 258
IAEE+FTSR+MVDV+ELKEN PD LVL+ DDD LP+ DLAY+ VPVHDV VGS+ILV
Sbjct: 208 IAEEYFTSRSMVDVRELKENNPDFALVLDTNDDDKLPNTFDLAYKRVPVHDVTVGSFILV 267
Query: 259 GAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNE 318
G GE+VPVDCEV+QG+ATITIEHLTGEVKPLEAKVGDRIPGG+RNLDGR+I++ KTW E
Sbjct: 268 GTGESVPVDCEVFQGSATITIEHLTGEVKPLEAKVGDRIPGGSRNLDGRIIVEVMKTWKE 327
Query: 319 STLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVC 378
STL+RIVQLTEEAQ NKPKL+RWLDEFGE+YS+VVVVLS+AIA+IGPFLFKW F+ TS C
Sbjct: 328 STLSRIVQLTEEAQSNKPKLERWLDEFGERYSQVVVVLSIAIAVIGPFLFKWPFVSTSAC 387
Query: 379 RGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKT 438
RGS+YRALGLMVAASPCALAVAPLAYA AISSCARKGILLKGG VLDALASCHTIAFDKT
Sbjct: 388 RGSIYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVLDALASCHTIAFDKT 447
Query: 439 GTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVV 498
GTLTTGGL+FKAIEPIYGH +R+ +++ SCCIP CEKEALAVA+AMEKGTTHPIGRAVV
Sbjct: 448 GTLTTGGLVFKAIEPIYGHHVRNNESNVPSCCIPTCEKEALAVASAMEKGTTHPIGRAVV 507
Query: 499 DHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE 558
DHS GKDLPSVS++ FEYFPGRGLTATVN IESGT G K LKASLGS+DFITSLC+SEDE
Sbjct: 508 DHSEGKDLPSVSVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSLCQSEDE 567
Query: 559 SRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLT 618
S KIKEAVN SSYG +VHAALSVN+KVTLIHLEDRPRPGV +VI EL+D A+LRVMMLT
Sbjct: 568 SEKIKEAVNTSSYGSEYVHAALSVNQKVTLIHLEDRPRPGVVNVIQELQDEAKLRVMMLT 627
Query: 619 GDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAAT 678
GDHESSA+RVA+ VGINE +C+LKPEDKL+HVK SRDMGGGLIMVGEGINDAPALAAAT
Sbjct: 628 GDHESSARRVASGVGINEFHCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAAT 687
Query: 679 VGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLP 738
VGIVLA RASATAIAVADVLLLR +IS VPFC+AKSRQTTSL+KQNVALAL+ I++ASLP
Sbjct: 688 VGIVLAHRASATAIAVADVLLLRESISAVPFCIAKSRQTTSLIKQNVALALTSILMASLP 747
Query: 739 SVLGFLPLWLTV 750
SVLGFLPLWLTV
Sbjct: 748 SVLGFLPLWLTV 759
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224094264|ref|XP_002310116.1| heavy metal ATPase [Populus trichocarpa] gi|222853019|gb|EEE90566.1| heavy metal ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/812 (72%), Positives = 639/812 (78%), Gaps = 78/812 (9%)
Query: 1 METTLLHSTIHVASFPSPTRSIRLKRVNSL---KPTLSFTHPVIRFNFKPLNYRPVNCLS 57
METT L I V FPSP+ S+ N+ L VI + P N LS
Sbjct: 1 METTTLRHAIGVTDFPSPSLSLSAAANNNYYYHSSKLLVRKRVIYHQSSLSSKFPFNSLS 60
Query: 58 HP--HINHQHHY--------------------HDHHHHHRHNDCSELSGPQKAVIKFAKA 95
HP N H + HHHHH S+L+GPQ+A++KFAK
Sbjct: 61 HPPRSTNFNHRFILRATGHDHHHDHHDHDHDHCCHHHHHEGGHDSQLTGPQRALLKFAKT 120
Query: 96 TRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASL 155
W+DLAN LREHLQLCCC+AALF+ AAACPY++PKPA+KPLQNA + VAFPLVGVSASL
Sbjct: 121 LGWMDLANLLREHLQLCCCSAALFITAAACPYIIPKPAVKPLQNALMLVAFPLVGVSASL 180
Query: 156 DALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKE 215
DALTDI GGKVNIHVLMA A FASIFMGN+LEGGLLLAMFNLAHI E
Sbjct: 181 DALTDIVGGKVNIHVLMALAGFASIFMGNALEGGLLLAMFNLAHIGAE------------ 228
Query: 216 LKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA 275
YPDS LVL+V+DD PDVSDL+Y+SVPVHD+EVGS I + AVPVDCEV+QG A
Sbjct: 229 --GKYPDSTLVLDVNDDKPPDVSDLSYKSVPVHDIEVGSXIW--SELAVPVDCEVFQGNA 284
Query: 276 TITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNK 335
TITIEHLTGEVKPLEAKVGDRIPGGARN+DGRMI+KATKTW ESTL+RIVQLTEEAQ +K
Sbjct: 285 TITIEHLTGEVKPLEAKVGDRIPGGARNVDGRMIVKATKTWKESTLSRIVQLTEEAQSSK 344
Query: 336 PKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTS------------------- 376
PKLQRWLDEFGEQYSKVVV LS+AIAL+GPFLFKW F+ TS
Sbjct: 345 PKLQRWLDEFGEQYSKVVVGLSIAIALLGPFLFKWPFMSTSGLNNQNEEGKEKTKSTKKT 404
Query: 377 ------------------VCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILL 418
VCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILL
Sbjct: 405 QIRKWWEIGIGIGPVIWHVCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILL 464
Query: 419 KGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEA 478
KGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGH IR+ +T+ SCCIP+CEKEA
Sbjct: 465 KGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHLIRNNRTNFTSCCIPSCEKEA 524
Query: 479 LAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKE 538
LAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVS+D FEYFPG+GL AT+N IESGT GGK
Sbjct: 525 LAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSVDSFEYFPGKGLVATLNNIESGTGGGKL 584
Query: 539 LKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPG 598
LKASLGSV+FI SLCKSEDESRKIKEAVN SSYGR FVHAALSV EKVTLIHLEDRPRPG
Sbjct: 585 LKASLGSVEFIASLCKSEDESRKIKEAVNASSYGRDFVHAALSVEEKVTLIHLEDRPRPG 644
Query: 599 VSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG 658
VSDVI+EL+D AR RVMMLTGDHESSA RVA AVGI+EVYCSLKPEDKLN VK SRDMG
Sbjct: 645 VSDVISELQDQARFRVMMLTGDHESSAWRVAKAVGISEVYCSLKPEDKLNQVKGISRDMG 704
Query: 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTT 718
GGL+MVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLR+ ISGVPFC+AKSRQTT
Sbjct: 705 GGLVMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDTISGVPFCIAKSRQTT 764
Query: 719 SLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
SL+KQNVALAL+ I LASLPSVLGFLPLWLTV
Sbjct: 765 SLIKQNVALALTSIFLASLPSVLGFLPLWLTV 796
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438839|ref|XP_002278549.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Vitis vinifera] gi|296087394|emb|CBI33768.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/671 (79%), Positives = 596/671 (88%)
Query: 80 SELSGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQN 139
S LS Q++ ++ AKA RW DLA+FLRE+L LCCC+ LFLAAAACPYL+PKPA+KPLQN
Sbjct: 101 STLSRTQESFLRIAKAIRWADLADFLRENLHLCCCSTGLFLAAAACPYLIPKPAVKPLQN 160
Query: 140 AFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAH 199
AF+ VAFPLVGVSASLDAL DI GGKVNIHVLMA AAFAS+FMGN LEGGLLLAMFNLAH
Sbjct: 161 AFIFVAFPLVGVSASLDALIDITGGKVNIHVLMALAAFASVFMGNPLEGGLLLAMFNLAH 220
Query: 200 IAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVG 259
IAEE+FTSR++VDVKELKENYPD LVL V+++ P+ S LAY+ VPVHDVEVGSYILV
Sbjct: 221 IAEEYFTSRSVVDVKELKENYPDFALVLEVNNNKPPNFSHLAYKKVPVHDVEVGSYILVK 280
Query: 260 AGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNES 319
GE VPVDCEV+QG +TITIEHLTGE+KP+E VG+RIPGGA NL G MI+KATKTW ES
Sbjct: 281 DGEFVPVDCEVFQGRSTITIEHLTGEMKPVERTVGERIPGGAHNLSGMMIVKATKTWKES 340
Query: 320 TLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCR 379
TL+RIVQLTEEAQLNKPKLQRWLDEFG+ YSKVVVVLS+A+A IGP LFKW FI TSVCR
Sbjct: 341 TLSRIVQLTEEAQLNKPKLQRWLDEFGDHYSKVVVVLSIAVAFIGPLLFKWPFISTSVCR 400
Query: 380 GSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTG 439
GSVYRALGLMVAASPCALAVAPLAYA AIS+CARKGILLKGG VLDALASCHTIAFDKTG
Sbjct: 401 GSVYRALGLMVAASPCALAVAPLAYAIAISACARKGILLKGGHVLDALASCHTIAFDKTG 460
Query: 440 TLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVD 499
TLT+G L FKAIEPIYGH +R+ ++ +SCCIP+CE EALAVAAAME+GTTHPIGRAVVD
Sbjct: 461 TLTSGKLTFKAIEPIYGHGVRAYRSKFVSCCIPSCEIEALAVAAAMERGTTHPIGRAVVD 520
Query: 500 HSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDES 559
H +GKDLP V+++ FE PGRGL+AT+ IESG GG+ LKAS+GS+++I SLCKSEDE
Sbjct: 521 HCVGKDLPPVAVENFESLPGRGLSATLTSIESGIGGGELLKASIGSLEYILSLCKSEDEL 580
Query: 560 RKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTG 619
+KIKEA++ SSYG FVHAALSVN+KVTL+H ED PRPGV DVI L+D A+LRVMMLTG
Sbjct: 581 KKIKEAMSTSSYGSDFVHAALSVNKKVTLLHFEDEPRPGVLDVILALQDQAKLRVMMLTG 640
Query: 620 DHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATV 679
DHESSA RVANAVGI EVYCSLKPEDKLNHVK SR+ GGGLIMVG+GINDAPALAAATV
Sbjct: 641 DHESSAWRVANAVGIKEVYCSLKPEDKLNHVKSISREAGGGLIMVGDGINDAPALAAATV 700
Query: 680 GIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPS 739
GIVLAQRAS TAIAVADVLLLR+NIS VPFCV+KSRQTTSLVKQNVALALSCI+LASLPS
Sbjct: 701 GIVLAQRASGTAIAVADVLLLRDNISAVPFCVSKSRQTTSLVKQNVALALSCILLASLPS 760
Query: 740 VLGFLPLWLTV 750
VLGFLPLWLTV
Sbjct: 761 VLGFLPLWLTV 771
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15235511|ref|NP_195444.1| putative cadmium/zinc-transporting ATPase HMA1 [Arabidopsis thaliana] gi|12643808|sp|Q9M3H5.2|HMA1_ARATH RecName: Full=Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic; AltName: Full=Protein HEAVY METAL ATPASE 1; Flags: Precursor gi|4006855|emb|CAB16773.1| Cu2+-transporting ATPase-like protein [Arabidopsis thaliana] gi|7270710|emb|CAB80393.1| Cu2+-transporting ATPase-like protein [Arabidopsis thaliana] gi|57283989|emb|CAI43274.1| putative metal-transporting ATPase [Arabidopsis thaliana] gi|332661375|gb|AEE86775.1| putative cadmium/zinc-transporting ATPase HMA1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/668 (81%), Positives = 602/668 (90%), Gaps = 1/668 (0%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFL 142
S PQK + FAKA W+ LAN+LREHL LCC AAA+FLAAA CPYL P+P IK LQNAF+
Sbjct: 100 SKPQKMLFGFAKAIGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFM 159
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 160 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 219
Query: 203 EFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ PDS L++ V + N+P++SDL+Y+SVPVH VEVGSY+LVG GE
Sbjct: 220 EFFTSRSMVDVKELKESNPDSALLIEVHNGNVPNISDLSYKSVPVHSVEVGSYVLVGTGE 279
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCEVYQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 280 IVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 339
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSKVVVVLSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 340 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 399
Query: 383 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG QVLDALASCHTIAFDKTGTLT
Sbjct: 400 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLT 459
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + I+CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 460 TGGLTCKAIEPIYGHQ-GGTNSSVITCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 518
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG+++ E + KASLGS++FITSL KSEDES++I
Sbjct: 519 GKDLPSIFVESFEYFPGRGLTATVNGVKTVAEESRLRKASLGSIEFITSLFKSEDESKQI 578
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN SSYG+ FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 579 KDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 638
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LKPEDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 639 SSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 698
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQNVALAL+ I LA+LPSVLG
Sbjct: 699 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLG 758
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 759 FVPLWLTV 766
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7710954|emb|CAB90352.1| putative metal ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/668 (81%), Positives = 601/668 (89%), Gaps = 1/668 (0%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFL 142
S PQK + FAKA W+ LAN+LREHL LCC AAA+FLAAA CPYL P+P IK LQNAF+
Sbjct: 100 SKPQKVLFGFAKAIGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFM 159
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 160 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 219
Query: 203 EFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ PDS L++ V + N+P++SDL+Y+SVPVH VEVGSY+LVG GE
Sbjct: 220 EFFTSRSMVDVKELKESNPDSALLIEVHNGNVPNISDLSYKSVPVHSVEVGSYVLVGTGE 279
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCEVYQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 280 IVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 339
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSKVVVVLSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 340 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 399
Query: 383 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG QVLDALASCHTIAFDKTGTLT
Sbjct: 400 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLT 459
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + I+CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 460 TGGLTCKAIEPIYGHQ-GGTNSSVITCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 518
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG+++ E + KASLGS++FITSL KSEDES++I
Sbjct: 519 GKDLPSIFVESFEYFPGRGLTATVNGVKTVAEESRLRKASLGSIEFITSLFKSEDESKQI 578
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN SSYG+ FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 579 KDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 638
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LK EDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 639 SSAWRVANAVGITEVYCNLKSEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 698
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQNVALAL+ I LA+LPSVLG
Sbjct: 699 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLG 758
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 759 FVPLWLTV 766
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|63253545|gb|AAY34978.1| chloroplast heavy metal P-type ATPase precursor [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/668 (81%), Positives = 601/668 (89%), Gaps = 1/668 (0%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFL 142
S PQK + FAKA W+ LAN+LREHL LCC AAA+FLAAA CPYL P+P IK LQNAF+
Sbjct: 100 SKPQKVLFGFAKAIGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFM 159
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 160 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 219
Query: 203 EFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ PDS L++ V + N+P++SDL+Y+SVPVH V+VGSY+LVG GE
Sbjct: 220 EFFTSRSMVDVKELKESNPDSALLIEVHNGNVPNISDLSYKSVPVHSVKVGSYVLVGTGE 279
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCE YQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 280 IVPVDCEAYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 339
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSKVVVVLSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 340 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 399
Query: 383 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG QVLDALASCHTIAFDKTGTLT
Sbjct: 400 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLT 459
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + I+CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 460 TGGLTCKAIEPIYGHQ-GGTNSSVITCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 518
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG+++ E + KASLGS++FITSL KSEDES++I
Sbjct: 519 GKDLPSIFVESFEYFPGRGLTATVNGVKTVAEESRLRKASLGSIEFITSLFKSEDESKQI 578
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN SSYG+ FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 579 KDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 638
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LKPEDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 639 SSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 698
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQNVALAL+ I LA+LPSVLG
Sbjct: 699 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLG 758
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 759 FVPLWLTV 766
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798152|ref|XP_002866960.1| hypothetical protein ARALYDRAFT_490893 [Arabidopsis lyrata subsp. lyrata] gi|297312796|gb|EFH43219.1| hypothetical protein ARALYDRAFT_490893 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/668 (81%), Positives = 598/668 (89%), Gaps = 1/668 (0%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFL 142
S PQK + FAK W+ LAN+LREHL LCC AAA+FLAAAACPYL PKP IK LQNAF+
Sbjct: 104 SKPQKVLFGFAKTIGWVRLANYLREHLHLCCSAAAMFLAAAACPYLAPKPYIKSLQNAFM 163
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 164 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 223
Query: 203 EFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ PDS L++ V + N+P++SDL+Y+SVPVH VEVGSYILVG GE
Sbjct: 224 EFFTSRSMVDVKELKESNPDSALLIEVLNGNVPNISDLSYKSVPVHSVEVGSYILVGTGE 283
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCEVYQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 284 IVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 343
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSKVVVVLSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 344 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 403
Query: 383 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG QVLDALASCHT+AFDKTGTLT
Sbjct: 404 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTVAFDKTGTLT 463
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + +CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 464 TGGLTCKAIEPIYGHQ-GGNNSSVTTCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 522
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG +S E + KASLGS++FITSL KSEDES++I
Sbjct: 523 GKDLPSIFVESFEYFPGRGLTATVNGAKSVAEESRLRKASLGSIEFITSLFKSEDESKQI 582
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN S YG FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 583 KDAVNASLYGNDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 642
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LKPEDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 643 SSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 702
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQN+ALAL+ I LA+LPSVLG
Sbjct: 703 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNIALALTSIFLAALPSVLG 762
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 763 FVPLWLTV 770
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449468396|ref|XP_004151907.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/674 (80%), Positives = 606/674 (89%), Gaps = 1/674 (0%)
Query: 77 NDCSELSGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKP 136
+D EL+G QKA ++FA+A RW DLAN+LREHL +CC +AALF+ AAA PYL+PKPA+KP
Sbjct: 95 SDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHMCCGSAALFVTAAAFPYLVPKPAVKP 154
Query: 137 LQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFN 196
LQN F+AVAFPLVGVSASLDALTDI+GGKVNIHVLMA AAFASIFMGN LEGGLLL MFN
Sbjct: 155 LQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFN 214
Query: 197 LAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYI 256
+AHIAEE+FT ++M+DVKELKE++PD LVL+V+DDNLPD SDL +R VPV DV+VGSYI
Sbjct: 215 MAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDDNLPDTSDLEHRRVPVRDVKVGSYI 274
Query: 257 LVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTW 316
LVGAGE+VPVDCEVYQG ATIT+EHLTGEV+PL+ KVG+R+PGGARNLDGR+I+KATKTW
Sbjct: 275 LVGAGESVPVDCEVYQGCATITVEHLTGEVRPLQIKVGERVPGGARNLDGRIIVKATKTW 334
Query: 317 NESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTS 376
ESTL+RIVQLTEEAQLNKPKLQRWLDEFGE YSKVVVVLS+A+ALIGP LFKW FI T
Sbjct: 335 EESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTP 394
Query: 377 VCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFD 436
RGSVYRALGLMVAASPCALA APLAYA AISSCARKGILLKGG VLDA+ASCHT+AFD
Sbjct: 395 GFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFD 454
Query: 437 KTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRA 496
KTGTLTTGGL+FKAIEPIYGH I K+ SCCIP+CEKEALAVAAAMEKGTTHPIGRA
Sbjct: 455 KTGTLTTGGLVFKAIEPIYGHKIGGDKSQFASCCIPSCEKEALAVAAAMEKGTTHPIGRA 514
Query: 497 VVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE 556
VVDHS+GKDLPS+S++ EYFPGRGL AT++GI+SG GGK KASLGSVDFITS CKSE
Sbjct: 515 VVDHSVGKDLPSISVESTEYFPGRGLIATLHGIKSGI-GGKLRKASLGSVDFITSFCKSE 573
Query: 557 DESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMM 616
+ESR IK+AV S+YG FVHAALSV++KVTLIHLED+PRPGV D IAEL+ +LRVMM
Sbjct: 574 NESRMIKDAVRASTYGSEFVHAALSVDQKVTLIHLEDQPRPGVIDAIAELQHLGKLRVMM 633
Query: 617 LTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA 676
LTGDH+SSA +VANAVGINEVY SLKPEDKL HVK SR+MGGGLIMVGEGINDAPALAA
Sbjct: 634 LTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAA 693
Query: 677 ATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILAS 736
ATVGIVLA RASATA AVADVLLL+++ISGVPFC+AKSRQTTSL+KQNV LAL+ I+LAS
Sbjct: 694 ATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLIKQNVTLALTSILLAS 753
Query: 737 LPSVLGFLPLWLTV 750
LPSVLGFLPLWLTV
Sbjct: 754 LPSVLGFLPLWLTV 767
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449484083|ref|XP_004156779.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/675 (79%), Positives = 604/675 (89%), Gaps = 2/675 (0%)
Query: 77 NDCSELSGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALFLAAAACPYLLPKPAIKP 136
+D EL+G QKA ++FA+A RW DLAN+LREHL +CC +AALF+ AAA PYL+PKPA+KP
Sbjct: 95 SDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHMCCGSAALFVTAAAFPYLVPKPAVKP 154
Query: 137 LQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFN 196
LQN F+AVAFPLVGVSASLDALTDI+GGKVNIHVLMA AAFASIFMGN LEGGLLL MFN
Sbjct: 155 LQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFN 214
Query: 197 LAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYI 256
+AHIAEE+FT ++M+DVKELKE++PD LVL+V+DDNLPD SDL +R VPV DV+VGSYI
Sbjct: 215 MAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDDNLPDTSDLEHRRVPVRDVKVGSYI 274
Query: 257 LVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTW 316
LVGAGE+VPVDCEVYQG ATIT+EHLTGEV+PL+ KVG+R+PGGARNLDGR+I+KATKTW
Sbjct: 275 LVGAGESVPVDCEVYQGCATITVEHLTGEVRPLQIKVGERVPGGARNLDGRIIVKATKTW 334
Query: 317 NESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTS 376
ESTL+RIVQLTEEAQLNKPKLQRWLDEFGE YSKVVVVLS+A+ALIGP LFKW FI T
Sbjct: 335 EESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTP 394
Query: 377 VCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFD 436
RGSVYRALGLMVAASPCALA APLAYA AISSCARKGILLKGG VLDA+ASCHT+AFD
Sbjct: 395 GFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFD 454
Query: 437 KTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRA 496
KTGTLTTGGL+FKAIEPIYGH I K+ SCCIP+CEKEALAVAAAMEKGTTHPIGRA
Sbjct: 455 KTGTLTTGGLVFKAIEPIYGHKIGGDKSQFASCCIPSCEKEALAVAAAMEKGTTHPIGRA 514
Query: 497 VVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE 556
VVDHS+GKDLPS+S++ EYFPGRGL AT++GI+SG GGK KASLGSVDFITS CKSE
Sbjct: 515 VVDHSVGKDLPSISVESTEYFPGRGLIATLHGIKSGI-GGKLRKASLGSVDFITSFCKSE 573
Query: 557 DESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMM 616
+ESR IK+AV S+YG FVHAALSV++KVTLIHLED+PRPGV D IAEL+ +LRVMM
Sbjct: 574 NESRMIKDAVRASTYGSEFVHAALSVDQKVTLIHLEDQPRPGVIDAIAELQHLGKLRVMM 633
Query: 617 LTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA 676
LTGDH+SSA +VANAVGINEVY SLKPEDKL HVK SR+MGGGLIMVGEGINDAPALAA
Sbjct: 634 LTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAA 693
Query: 677 ATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVK-QNVALALSCIILA 735
ATVGIVLA RASATA AVADVLLL+++ISGVPFC+AKSRQTTSLV + V LAL+ I+LA
Sbjct: 694 ATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLVSFKTVTLALTSILLA 753
Query: 736 SLPSVLGFLPLWLTV 750
SLPSVLGFLPLWLTV
Sbjct: 754 SLPSVLGFLPLWLTV 768
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 750 | ||||||
| TAIR|locus:2115020 | 819 | HMA1 "heavy metal atpase 1" [A | 0.889 | 0.814 | 0.739 | 2.6e-259 | |
| TIGR_CMR|BA_0410 | 641 | BA_0410 "heavy metal-transport | 0.38 | 0.444 | 0.306 | 3.7e-53 | |
| UNIPROTKB|Q87UL7 | 752 | cadA-1 "Cadmium-translocating | 0.352 | 0.351 | 0.303 | 2.5e-52 | |
| TIGR_CMR|CHY_0860 | 686 | CHY_0860 "cation-transporting | 0.352 | 0.384 | 0.281 | 6.3e-45 | |
| TAIR|locus:2119265 | 949 | PAA1 "P-type ATP-ase 1" [Arabi | 0.6 | 0.474 | 0.304 | 9.2e-44 | |
| UNIPROTKB|P0A502 | 718 | ctpC "Probable cation-transpor | 0.38 | 0.396 | 0.270 | 5.4e-43 | |
| UNIPROTKB|Q9KT72 | 768 | VC_1033 "Cation transport ATPa | 0.372 | 0.363 | 0.288 | 3.5e-42 | |
| TIGR_CMR|VC_1033 | 768 | VC_1033 "cation transport ATPa | 0.372 | 0.363 | 0.288 | 3.5e-42 | |
| TIGR_CMR|BA_3859 | 805 | BA_3859 "heavy metal-transport | 0.342 | 0.319 | 0.287 | 5e-42 | |
| TIGR_CMR|DET_0953 | 828 | DET_0953 "copper-translocating | 0.313 | 0.283 | 0.325 | 2.3e-41 |
| TAIR|locus:2115020 HMA1 "heavy metal atpase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2480 (878.1 bits), Expect = 2.6e-259, Sum P(2) = 2.6e-259
Identities = 494/668 (73%), Positives = 540/668 (80%)
Query: 83 SGPQKAVIKFAKATRWLDLANFLREHXXXXXXXXXXXXXXXXXXXXXXXXXIKPLQNAFL 142
S PQK + FAKA W+ LAN+LREH IK LQNAF+
Sbjct: 100 SKPQKMLFGFAKAIGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFM 159
Query: 143 AVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
V FPLVGVSASLDAL DIAGGKVNIHVLMA AAFAS+FMGN+LEGGLLLAMFNLAHIAE
Sbjct: 160 IVGFPLVGVSASLDALMDIAGGKVNIHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAE 219
Query: 203 EFFTSRAMVDVKELKENYXXXXXXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGE 262
EFFTSR+MVDVKELKE+ +Y+SVPVH VEVGSY+LVG GE
Sbjct: 220 EFFTSRSMVDVKELKESNPDSALLIEVHNGNVPNISDLSYKSVPVHSVEVGSYVLVGTGE 279
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VPVDCEVYQG+ATITIEHLTGEVKPLEAK GDR+PGGARNLDGRMI+KATK WN+STLN
Sbjct: 280 IVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATKAWNDSTLN 339
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+IVQLTEEA NKPKLQRWLDEFGE YSK LSLAIA +GPFLFKW F+ T+ CRGSV
Sbjct: 340 KIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPFLFKWPFLSTAACRGSV 399
Query: 383 YRALGLMVAASPCXXXXXXXXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLT 442
YRALGLMVAASPC ISSCARKGILLKG QVLDALASCHTIAFDKTGTLT
Sbjct: 400 YRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLT 459
Query: 443 TGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI 502
TGGL KAIEPIYGH + I+CCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHS+
Sbjct: 460 TGGLTCKAIEPIYGHQ-GGTNSSVITCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSV 518
Query: 503 GKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKI 562
GKDLPS+ ++ FEYFPGRGLTATVNG+++ E + KASLGS++FITSL KSEDES++I
Sbjct: 519 GKDLPSIFVESFEYFPGRGLTATVNGVKTVAEESRLRKASLGSIEFITSLFKSEDESKQI 578
Query: 563 KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622
K+AVN SSYG+ FVHAALSV++KVTLIHLED+PRPGVS VIAELK ARLRVMMLTGDH+
Sbjct: 579 KDAVNASSYGKDFVHAALSVDQKVTLIHLEDQPRPGVSGVIAELKSWARLRVMMLTGDHD 638
Query: 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682
SSA RVANAVGI EVYC+LKPEDKLNHVK +R+ GGGLIMVGEGINDAPALAAATVGIV
Sbjct: 639 SSAWRVANAVGITEVYCNLKPEDKLNHVKNIAREAGGGLIMVGEGINDAPALAAATVGIV 698
Query: 683 LAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVXXXXXXXXXXXXPSVLG 742
LAQRASATAIAVAD+LLLR+NI+GVPFCVAKSRQTTSLVKQNV PSVLG
Sbjct: 699 LAQRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLG 758
Query: 743 FLPLWLTV 750
F+PLWLTV
Sbjct: 759 FVPLWLTV 766
|
|
| TIGR_CMR|BA_0410 BA_0410 "heavy metal-transporting ATPase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 3.7e-53, Sum P(2) = 3.7e-53
Identities = 93/303 (30%), Positives = 145/303 (47%)
Query: 144 VAFPLVGVSASLDALTD-IAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAE 202
+A+ + G + + + + D I ++N+ +LM AA + +G EG +L+ +F L+ E
Sbjct: 60 LAYIVGGYAKAKEGIEDTIEEKELNVEMLMLIAAIGAAMIGYWAEGAILIFIFALSGAME 119
Query: 203 EFFTSRAMVDVKELKENYXXXXXXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGE 262
+ S++ ++ L + VPV +++ IL+ GE
Sbjct: 120 SYTLSKSQKEISALLD----------LQPEEALRISNGTEERVPVGRLQINDIILIKPGE 169
Query: 263 AVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLN 322
VP D ++ G I +TGE P E K GD + G NL G + +K TK +++
Sbjct: 170 RVPADGTIHSGETNIDEAAITGEPIPNEKKHGDEVFAGTVNLRGAIEVKITKPSDQTLFQ 229
Query: 323 RIVQLTEEAQLNKPKLQRWLDEFGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSV 382
+I++L + AQ K Q ++++F Y K + + + FL WS+ T
Sbjct: 230 KIIRLVQSAQSEKSPSQLFIEKFEGTYVKGVLLVVTLMMFVPHFLLDWSWNET------F 283
Query: 383 YRALGLMVAASPCXXXXXXX-XXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 441
YRA+ L+V ASPC IS+ AR GIL KGG L+ LAS IAFDKTGTL
Sbjct: 284 YRAMILLVVASPCALVAAITPATLSAISNGARNGILFKGGIHLERLASVKAIAFDKTGTL 343
Query: 442 TTG 444
T G
Sbjct: 344 TEG 346
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| UNIPROTKB|Q87UL7 cadA-1 "Cadmium-translocating P-type ATPase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 326 (119.8 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 85/280 (30%), Positives = 134/280 (47%)
Query: 166 VNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYXXXXX 225
+NI+ LM+ A +I +G E +++ +F +A + E RA + L +
Sbjct: 194 LNINALMSIAVTGAILIGQWPEAAMVMFLFTVAELIEAKSLDRARNAISGLMQ------- 246
Query: 226 XXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGE 285
+++ + +VE+G+ + + GE V +D EV G +TI +TGE
Sbjct: 247 --LTPELATVKQADGSWQEIEAKNVELGAIVRIKPGERVGLDGEVVSGNSTIDQASITGE 304
Query: 286 VKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEF 345
P+E +GD++ G N G + + T N STL RI+ E AQ ++ QR++D F
Sbjct: 305 SLPVEKTIGDKVFAGTINQAGSLEYRVTAAANNSTLARIIHAVEAAQGSRAPTQRFVDSF 364
Query: 346 GEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCXXXXXX-XXX 404
Y+ ++L +ALI P F + +YRAL L+V A PC
Sbjct: 365 SRIYTPVVFVVALGVALIAPLFFGGQWFDW------IYRALVLLVVACPCALVISTPVTI 418
Query: 405 XXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 444
+++ ARKGIL+KGG L+ +A DKTGTLT G
Sbjct: 419 VSGLAAAARKGILIKGGVYLEMGEKLDYLALDKTGTLTHG 458
|
|
| TIGR_CMR|CHY_0860 CHY_0860 "cation-transporting ATPase, E1-E2 family, selenocysteine-containing" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 6.3e-45, Sum P(3) = 6.3e-45
Identities = 79/281 (28%), Positives = 126/281 (44%)
Query: 165 KVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYXXXX 224
K+ +LM ++ +G E L +F ++ E + +A +KEL
Sbjct: 134 KITSDLLMLTGLIGAMALGELTEAALAAVLFGISEFVENYNLEKARTALKEL-------- 185
Query: 225 XXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTG 284
+ V ++ G +++ GE +PVD + +G ++ +TG
Sbjct: 186 --FAAVPEEALVLKNGEEQLCKVEEIRPGDLVVIKPGEKIPVDGVLKKGRIEVSQAAITG 243
Query: 285 EVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDE 344
E + + G+ + G+ NLDG I++ K E+ + R+ +L EEAQ K Q LD
Sbjct: 244 ESRGILKLPGEEVYAGSINLDGFGIIETQKPSGETVIARMAELIEEAQKEKLPAQTLLDR 303
Query: 345 FGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCXXXXXX-XX 403
F Y+ L+ +A I P L F R +YRAL +V + PC
Sbjct: 304 FAAVYTPLVLALAFLVAFIPPLLLGGEF------RLWIYRALTFLVVSCPCALLIAVPIS 357
Query: 404 XXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 444
+ + AR+GI++KG + L+ LA C TI FDKTGTLT G
Sbjct: 358 VISSLGAAARRGIVVKGSRNLEQLALCDTIVFDKTGTLTRG 398
|
|
| TAIR|locus:2119265 PAA1 "P-type ATP-ase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 9.2e-44, P = 9.2e-44
Identities = 151/496 (30%), Positives = 243/496 (48%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
VP + + VG +++ G+ VP D V G +TI TGE P+ + G ++ G+ NL
Sbjct: 402 VPCNSLSVGDLVVILPGDRVPADGVVKSGRSTIDESSFTGEPLPVTKESGSQVAAGSINL 461
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKXXXXLSLAIALIG 364
+G + ++ ++ E+ + I++L EEAQ + +Q+ +D+ +++ LS A
Sbjct: 462 NGTLTVEVHRSGGETAVGDIIRLVEEAQSREAPVQQLVDKVAGRFTYGVMALSAAT---- 517
Query: 365 PFLFKWSFIGTSVCRGSVYR------ALGL----MVAASPCXXXXXXXXXXXXISSC-AR 413
F F W+ G V +++ AL L +V A PC +S AR
Sbjct: 518 -FTF-WNLFGAHVLPSALHNGSPMSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGAR 575
Query: 414 KGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPN 473
+G+LL+GG +L+ + T+ FDKTGTLT G + E I I H+++
Sbjct: 576 RGLLLRGGDILEKFSLVDTVVFDKTGTLTKGHPV--VTEVI----IPENPRHNLNDTWS- 628
Query: 474 CEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSID--RFEYFPGRGLTATVNGIES 531
E E L +AAA+E TTHP+G+A+V + ++ ++ + F PG G A VN +
Sbjct: 629 -EVEVLMLAAAVESNTTHPVGKAIVKAARARNCQTMKAEDGTFTEEPGSGAVAIVNN-KR 686
Query: 532 GTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHL 591
T G E G+ SL E+ +N S V+ + N +I
Sbjct: 687 VTVGTLEWVKRHGATG--NSLLALEEHE------INNQSV----VYIGVD-NTLAAVIRF 733
Query: 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSLKPEDKLNH 649
ED+ R + V+ L + V ML+GD ++A VA+ VGIN V +KP +K N
Sbjct: 734 EDKVREDAAQVVENLTRQG-IDVYMLSGDKRNAANYVASVVGINHERVIAGVKPAEKKNF 792
Query: 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPF 709
+ ++ + MVG+GINDA ALA++ VG+ + A A A V+ V+L+ N ++ +
Sbjct: 793 INELQKNKKI-VAMVGDGINDAAALASSNVGVAMGGGAGA-ASEVSPVVLMGNRLTQLLD 850
Query: 710 CVAKSRQTTSLVKQNV 725
+ SRQT VKQN+
Sbjct: 851 AMELSRQTMKTVKQNL 866
|
|
| UNIPROTKB|P0A502 ctpC "Probable cation-transporting P-type ATPase C" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 5.4e-43, Sum P(2) = 5.4e-43
Identities = 82/303 (27%), Positives = 134/303 (44%)
Query: 157 ALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKEL 216
AL + GK L++ A AS+ + ++ +L + N+ ++ R + EL
Sbjct: 145 ALRSLRSGKAGTDALVSAATVASLILRENVVALTVLWLLNIGEYLQDLTLRRTRRAISEL 204
Query: 217 KENYXXXXXXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTAT 276
VP+ V++G ++V A+PVD EV G A
Sbjct: 205 LRGNQDTAWVRLTDPSAGSDAATEI--QVPIDTVQIGDEVVVHEHVAIPVDGEVVDGEAI 262
Query: 277 ITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKP 336
+ +TGE P+ VG R+ G+ + GR++++A N++T+ RI+ EEAQL++
Sbjct: 263 VNQSAITGENLPVSVVVGTRVHAGSVVVRGRVVVRAHAVGNQTTIGRIISRVEEAQLDRA 322
Query: 337 KLQRWLDEFGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCX 396
+Q + F ++ +S AIAL+ G V RA+ +++ A PC
Sbjct: 323 PIQTVGENFSRRFVPTSFIVS-AIALL--------------ITGDVRRAMTMLLIACPCA 367
Query: 397 XXXXX-XXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIY 455
I + AR+GIL+KGG L+ I FDKTGTLT G + I ++
Sbjct: 368 VGLSTPTAISAAIGNGARRGILIKGGSHLEQAGRVDAIVFDKTGTLTVGRPVVTNIVAMH 427
Query: 456 GHW 458
W
Sbjct: 428 KDW 430
|
|
| UNIPROTKB|Q9KT72 VC_1033 "Cation transport ATPase, E1-E2 family" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 324 (119.1 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 86/298 (28%), Positives = 141/298 (47%)
Query: 162 AGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYX 221
+G +I LM+ AA ++++G +LE ++L +F + E + SRA V+ L
Sbjct: 206 SGSPFSIETLMSVAAIGALYLGETLEAAMVLLLFLIGERLEAYAASRARTGVQALMALVP 265
Query: 222 XXXXXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH 281
+VP ++ G I V G +P D + A++
Sbjct: 266 ETAIRIEHGERV----------TVPAAQLQPGDVIEVAPGGRLPADGRLL-AAASLDNSA 314
Query: 282 LTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRW 341
LTGE P+E G+R+ G +D + ++ T E+ ++RI+ + EEA+ K L+R+
Sbjct: 315 LTGESLPVELTAGERVSAGCVIVDKVVQIEITSKQGENAIDRILHMIEEAESRKAPLERF 374
Query: 342 LDEFGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCXXXXXX 401
LD+F Y+ ++LA+ ++ P F G + +YR L L++ A PC
Sbjct: 375 LDKFSRWYTPLMMLVALAVIVVPPLAF-----GAD-WQTWIYRGLALLLIACPCALVIST 428
Query: 402 -XXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW 458
+++ AR+G L+KGG L+ L TIAFDKTGTLT G + P+ G W
Sbjct: 429 PAAITSGLAAAARRGALIKGGAALEQLGKIETIAFDKTGTLTEGKPQVTDLIPLQG-W 485
|
|
| TIGR_CMR|VC_1033 VC_1033 "cation transport ATPase, E1-E2 family" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 324 (119.1 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 86/298 (28%), Positives = 141/298 (47%)
Query: 162 AGGKVNIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYX 221
+G +I LM+ AA ++++G +LE ++L +F + E + SRA V+ L
Sbjct: 206 SGSPFSIETLMSVAAIGALYLGETLEAAMVLLLFLIGERLEAYAASRARTGVQALMALVP 265
Query: 222 XXXXXXXXXXXXXXXXXXXAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH 281
+VP ++ G I V G +P D + A++
Sbjct: 266 ETAIRIEHGERV----------TVPAAQLQPGDVIEVAPGGRLPADGRLL-AAASLDNSA 314
Query: 282 LTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRW 341
LTGE P+E G+R+ G +D + ++ T E+ ++RI+ + EEA+ K L+R+
Sbjct: 315 LTGESLPVELTAGERVSAGCVIVDKVVQIEITSKQGENAIDRILHMIEEAESRKAPLERF 374
Query: 342 LDEFGEQYSKXXXXLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCXXXXXX 401
LD+F Y+ ++LA+ ++ P F G + +YR L L++ A PC
Sbjct: 375 LDKFSRWYTPLMMLVALAVIVVPPLAF-----GAD-WQTWIYRGLALLLIACPCALVIST 428
Query: 402 -XXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW 458
+++ AR+G L+KGG L+ L TIAFDKTGTLT G + P+ G W
Sbjct: 429 PAAITSGLAAAARRGALIKGGAALEQLGKIETIAFDKTGTLTEGKPQVTDLIPLQG-W 485
|
|
| TIGR_CMR|BA_3859 BA_3859 "heavy metal-transporting ATPase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 275 (101.9 bits), Expect = 5.0e-42, Sum P(2) = 5.0e-42
Identities = 79/275 (28%), Positives = 131/275 (47%)
Query: 475 EKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTE 534
E+E L + A EK + HP+ A+V+ K + S + FE PG G+ + V G +
Sbjct: 523 EEEILRLVGAAEKKSEHPLAEAIVEGIKEKKIDIPSSETFEAIPGFGIESVVEGKQL-LI 581
Query: 535 GGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLED 593
G + L ++D I + KS +E + G +++N++ ++ + D
Sbjct: 582 GTRRLMKKF-NID-IEEVSKSMEELER-----------EGKTAMLIAINKEYAGIVAVAD 628
Query: 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRT 653
+ I LK L V+M+TGD+ +AQ +A VGI V + PE K VK+
Sbjct: 629 TVKDTSKAAITRLKKMG-LDVVMITGDNTQTAQAIAGQVGIEHVIAEVLPEGKAEEVKKL 687
Query: 654 SRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAK 713
G + MVG+GINDAPALA A +G+ + + A+ AD+ L+R +++ + +
Sbjct: 688 QAQ-GKKVAMVGDGINDAPALATADIGMAIGT-GTDVAMEAADITLIRGDLNSIADAIFM 745
Query: 714 SRQTTSLVKQNVXXXXXXXXXXXXPSVLGFLPLWL 748
S+ T +KQN+ + GFL W+
Sbjct: 746 SKMTIRNIKQNLFWALAYNGLGIPIAAFGFLAPWV 780
|
|
| TIGR_CMR|DET_0953 DET_0953 "copper-translocating P-type ATPase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 82/252 (32%), Positives = 138/252 (54%)
Query: 475 EKEA-LAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGT 533
+K++ L + A+ E+ + HP+ +AVV + K L S F PG GL ATV+G +
Sbjct: 518 DKDSFLTLVASAEQFSEHPLAKAVVKEAARKKLKITSSSEFSALPGAGLKATVSGKQI-L 576
Query: 534 EGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLED 593
G L S + I SL + + E+ K+ EA G + A + ++ + D
Sbjct: 577 IGNANLMQS----NRI-SLAEYQSEADKLWEA------GENLIFVAAD-GKLEGMVAVRD 624
Query: 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRT 653
+ V+AELK + +LR +MLTGD++ +A+R+A+ +G+++ +KPEDK V+
Sbjct: 625 ILKRESQAVVAELKAN-KLRTIMLTGDNQRAAKRIADELGLDQYISEVKPEDKSRLVQEL 683
Query: 654 SRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAK 713
+D G + MVG+GINDAPALA A VGI + + A+ D+ L+ ++ G+ +
Sbjct: 684 -QDQGHFVAMVGDGINDAPALAKADVGIAIGT-GTDIAMETGDITLISGDLFGLTKAIVL 741
Query: 714 SRQTTSLVKQNV 725
S+ T + ++QN+
Sbjct: 742 SKATFNTIRQNL 753
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9M3H5 | HMA1_ARATH | 3, ., 6, ., 3, ., 5 | 0.8173 | 0.8893 | 0.8144 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_VII0826 | heavy metal ATPase (825 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.155910001 | hypothetical protein (172 aa) | • | 0.504 | ||||||||
| eugene3.18960001 | heavy metal ATPase (102 aa) | • | 0.484 | ||||||||
| fgenesh4_pg.C_scaffold_4351000001 | hypothetical protein (166 aa) | • | 0.482 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 750 | |||
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.0 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 0.0 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-142 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-105 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-98 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-75 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-53 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-49 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 3e-37 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-29 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-29 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-21 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-21 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 8e-21 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-16 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-10 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-10 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-09 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-09 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-08 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 8e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-06 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 6e-06 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-06 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-05 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 0.001 | |
| pfam04592 | 238 | pfam04592, SelP_N, Selenoprotein P, N terminal reg | 0.003 | |
| PRK10019 | 279 | PRK10019, PRK10019, nickel/cobalt efflux protein R | 0.004 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 572 bits (1476), Expect = 0.0
Identities = 233/584 (39%), Positives = 324/584 (55%), Gaps = 68/584 (11%)
Query: 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVL 227
+ +LMA AA ++ +G LEG LLL +F++ EE+ + RA +K L E PD+ VL
Sbjct: 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL 60
Query: 228 NVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVK 287
V V +++VG ++V GE VPVD V GT+T+ LTGE
Sbjct: 61 RGGS----------LEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESV 110
Query: 288 PLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGE 347
P+E GD + GA NLDG + + TK +ST+ +IV L EEAQ K K QR++D F
Sbjct: 111 PVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFAR 170
Query: 348 QYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406
Y+ VV+ ++LAI L+ L +W F VYRAL L+V ASPCAL ++ P AY +
Sbjct: 171 YYTPVVLAIALAIWLVPGLLKRWPF--------WVYRALVLLVVASPCALVISAPAAYLS 222
Query: 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD 466
AIS+ AR GIL+KGG L+ALA T+AFDKTGTLTTG + P
Sbjct: 223 AISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------ 270
Query: 467 ISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATV 526
E L +AAA E+ ++HP+ RA+VD++ ++ +++ E PG G+ A V
Sbjct: 271 ----------EVLRLAAAAEQASSHPLARAIVDYARKRE----NVESVEEVPGEGVRAVV 316
Query: 527 NGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKV 586
+G E + L+A++G+ S G+ VH A +
Sbjct: 317 DGGEVRIGNPRSLEAAVGARP---------------------ESAGKTIVHVARD-GTYL 354
Query: 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDK 646
I L D PRP ++ IAELK +V+MLTGD + A+RVA +GI+EV+ L PEDK
Sbjct: 355 GYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPEDK 414
Query: 647 LNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISG 706
L VK R+ G + MVG+GINDAPALAAA VGI + S AI ADV+LL +++S
Sbjct: 415 LEIVKE-LREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473
Query: 707 VPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
+P + +R+T +VKQNV +AL I+L L ++ G LPLWL V
Sbjct: 474 LPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAV 517
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 539 bits (1392), Expect = 0.0
Identities = 217/582 (37%), Positives = 310/582 (53%), Gaps = 47/582 (8%)
Query: 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVL 227
+ +LMA A A+ MG LEG LLL +F L EE RA + L P + VL
Sbjct: 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL 60
Query: 228 NVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVK 287
D VPV +++VG ++V GE +PVD V G + + LTGE
Sbjct: 61 QGDGS---------EEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESM 111
Query: 288 PLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGE 347
P+E K GD + G N DG + ++ TK +STL +IV+L EEAQ +K +QR D
Sbjct: 112 PVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIAS 171
Query: 348 QYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406
Y V+ ++L ++ L G++YRAL ++V A PCAL +A P+A
Sbjct: 172 YYVPAVLAIALLTFVVWLALGAL---------GALYRALAVLVVACPCALGLATPVAILV 222
Query: 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD 466
AI AR+GIL+KGG L+ LA T+ FDKTGTLTTG IEP+
Sbjct: 223 AIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDA--------- 273
Query: 467 ISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATV 526
E+E LA+AAA+E+ ++HP+ RA+V ++ + L + E PG+G+ ATV
Sbjct: 274 -----SISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATV 328
Query: 527 NGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKV 586
+G E + +G+ F+ E S G S G+ V E +
Sbjct: 329 DGGE---------EVRIGNPRFLE--LAIEPISASPDLLNEGESQGK-TVVFVAVDGELL 376
Query: 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDK 646
+I L D+ RP + IA LK ++++MLTGD+ S+A+ VA +GI+EV+ L PEDK
Sbjct: 377 GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLPEDK 436
Query: 647 LNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISG 706
L VK ++ GG + MVG+GINDAPALAAA VGI + S AI AD++LL +++S
Sbjct: 437 LAIVKE-LQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSS 494
Query: 707 VPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWL 748
+P + SR+T ++KQN+A AL ++A + G LPLWL
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWL 536
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 434 bits (1119), Expect = e-142
Identities = 205/699 (29%), Positives = 313/699 (44%), Gaps = 62/699 (8%)
Query: 60 HINHQHHYHDHHHHHRHNDCSELSGPQKAVIKFAKATRWLDLANFLREHLQLCCCAAALF 119
+ + D + A L L L +
Sbjct: 42 TVVYDPEEVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLRRLIIAGLLTLPL 101
Query: 120 LAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFAS 179
L + L + + G A + G++N+ L+A A +
Sbjct: 102 LLLSLGLLLGA-FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGA 160
Query: 180 IFMG--------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDD 231
E +L+ +F L E RA ++ L + P + V+ D
Sbjct: 161 YAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDG 220
Query: 232 DNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEA 291
VPV +V+VG +LV GE +PVD V G++++ LTGE P+E
Sbjct: 221 ---------EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEK 271
Query: 292 KVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSK 351
K GD + G NLDG + ++ T+ ++TL RI++L EEAQ +K +QR D +
Sbjct: 272 KPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331
Query: 352 VVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISS 410
VV+V++ + P + ++YRAL ++V A PCAL +A P A I
Sbjct: 332 VVLVIAALTFALWPLFGGGDW------ETALYRALAVLVIACPCALGLATPTAILVGIGR 385
Query: 411 CARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCC 470
AR+GIL+KGG+ L+ LA T+ FDKTGTLT G +
Sbjct: 386 AARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVA----------------- 428
Query: 471 IPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIE 530
+ E E LA+AAA+E+ + HP+ +A+V + + LP V + FE PGRG+ A V+G
Sbjct: 429 LDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDV--EDFEEIPGRGVEAEVDGER 486
Query: 531 SGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LI 589
+G+ + + D + S G+ V A V+ K+ +I
Sbjct: 487 ----------VLVGNARLLGE--EGIDLPLLSERIEALESEGKTVVFVA--VDGKLVGVI 532
Query: 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNH 649
L D RP + IA LK ++V+MLTGD+ +A+ +A +GI+EV L PEDK
Sbjct: 533 ALADELRPDAKEAIAALKAL-GIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPEDKAEI 591
Query: 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPF 709
V+ + G + MVG+GINDAPALAAA VGI + + AI ADV+L+R+++S VP
Sbjct: 592 VRE-LQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPE 649
Query: 710 CVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWL 748
+ SR T ++KQN+ A +A + G L W+
Sbjct: 650 AIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWI 688
|
Length = 713 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 331 bits (852), Expect = e-105
Identities = 136/581 (23%), Positives = 243/581 (41%), Gaps = 69/581 (11%)
Query: 191 LLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDV 250
+L + + + +A ++ L + ++ + + ++ +P D+
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRN---------GWKEIPAKDL 52
Query: 251 EVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKV----------GDRIPGG 300
G +LV +GE VP D + G+ + +LTGE P+ GD + G
Sbjct: 53 VPGDVVLVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAG 112
Query: 301 ARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAI 360
G +I+ T T +T+ RI + + + LQ D +L L +
Sbjct: 113 TYVFGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFI----FILFLLL 168
Query: 361 ALIGPFLFKWSFIGTSV-CRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILL 418
+ FL+ + ++ RAL ++V P AL A +A A + A+KGIL+
Sbjct: 169 LALAVFLYLFIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILV 228
Query: 419 KGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEA 478
+ L+ L + DKTGTLT + + + G + +
Sbjct: 229 RNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKE----------------DNSS 272
Query: 479 LAVAAAMEKGTTHPIGRAVVDHS---IGKDLPSVSIDRFEYFP----GRGLTATVNGIES 531
VA + P+ +A++ + D + + FP + ++ V
Sbjct: 273 SLVACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVET--- 329
Query: 532 GTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGR--GFVHAALSVN-EKVTL 588
G +L G+ +FI C + +E K R F L + E + L
Sbjct: 330 --PDGSDLLFVKGAPEFILERCNNYEE----KYLELARQGLRVLAFASKELEDDLEFLGL 383
Query: 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLN 648
I ED RP + I ELK A ++V+M+TGD+ +A+ +A +GI +V+ + PE KL
Sbjct: 384 ITFEDPLRPDAKETIEELKA-AGIKVVMITGDNVLTAKAIAKELGI-DVFARVSPEQKLQ 441
Query: 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVP 708
V+ + G + M G+G+NDAPAL A VGI + A A AD++LL +++S +
Sbjct: 442 IVE-ALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDDLSAIV 494
Query: 709 FCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLT 749
V + R+ S +K N+ A++ ++ ++L + + L
Sbjct: 495 KAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLL 535
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 316 bits (811), Expect = 1e-98
Identities = 164/542 (30%), Positives = 264/542 (48%), Gaps = 56/542 (10%)
Query: 190 LLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHD 249
+L+ L E RA + +L + P + +L D + VPV
Sbjct: 59 MLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEI---------EEVPVEL 109
Query: 250 VEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMI 309
++ G + V GE +PVD V +G + + +TGE P+ KVGD + G N G ++
Sbjct: 110 LQPGDIVRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLV 169
Query: 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK 369
++AT T ++TL +IV+L +AQ +K +QR ++ + V + +AIALI
Sbjct: 170 VRATATGEDTTLAQIVRLVRQAQQSKAPIQR----LADKVAGYFVPVVIAIALIT--FVI 223
Query: 370 WSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALA 428
W +G ++ A+ +++ A PCAL +A P A A A+ G+L+K G L+ A
Sbjct: 224 WLILGADF-VFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAA 282
Query: 429 SCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKG 488
+ T+ FDKTGTLT G + G R E LA+AAA+E G
Sbjct: 283 NIDTVVFDKTGTLTQGKPTVTDVHVF-GESDR---------------DELLALAAALEAG 326
Query: 489 TTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDF 548
+ HP+ +A+V ++ K + + F+ PG G+ TV G LG+
Sbjct: 327 SEHPLAKAIVSYAKAKGITLSQVSDFKAIPGIGVEGTVEGH----------TIQLGNEKL 376
Query: 549 ITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELK 607
+ +++E +S ++VN ++ ++ L D+ +P +VI LK
Sbjct: 377 LGEN--GLKTDGEVEEGGGTTSVL-------VAVNGELAGVLALADQLKPEAKEVIQALK 427
Query: 608 DHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEG 667
+ +MLTGD+ +A+ VA +GI V + P+DK +K+ ++ G + MVG+G
Sbjct: 428 -RRGIEPVMLTGDNRKTAKAVAKELGIENVRAEVLPDDKAALIKKL-QEKGKVVAMVGDG 485
Query: 668 INDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVAL 727
INDAPALA A VGI + + AI ADV+LLRN+++ V + SR+T +KQN+
Sbjct: 486 INDAPALAQADVGIAIGA-GTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLW 544
Query: 728 AL 729
A
Sbjct: 545 AF 546
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 7e-75
Identities = 178/591 (30%), Positives = 291/591 (49%), Gaps = 68/591 (11%)
Query: 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVL 227
I LM+ AA ++F+G + E ++L +F + E + SRA V L P++ L
Sbjct: 189 IETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL 248
Query: 228 NVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVK 287
D V + D+ G I V AG +P D ++ A+ LTGE
Sbjct: 249 ----------RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESI 298
Query: 288 PLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGE 347
P+E G+++P GA ++D + L+ S ++RI+ L EEA+ + ++R++D F
Sbjct: 299 PVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSR 358
Query: 348 QYSKVVVVLSLAIALIGPFLF-----KWSFIGTSVCRGSVYRALGLMVAASPCALAVA-P 401
Y+ +++++L + L+ P LF +W +YR L L++ PCAL ++ P
Sbjct: 359 IYTPAIMLVALLVILVPPLLFAAPWQEW-----------IYRGLTLLLIGCPCALVISTP 407
Query: 402 LAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRS 461
A + +++ AR+G L+KGG L+ L T+AFDKTGTLT G I P G
Sbjct: 408 AAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG----- 462
Query: 462 KKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRG 521
E E LA+AAA+E+G+THP+ +A+V + + L + G G
Sbjct: 463 -----------ISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSG 511
Query: 522 LTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALS 581
+ VNG + L + G + + ++ + +I E + G+ V L
Sbjct: 512 IEGQVNGE-------RVLICAPGKLPPL-----ADAFAGQINELESA---GKTVV-LVLR 555
Query: 582 VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL 641
++ + LI L+D R I+ELK ++ +MLTGD+ +A +A +GI + L
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALG-IKGVMLTGDNPRAAAAIAGELGI-DFRAGL 613
Query: 642 KPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAV--ADVLL 699
PEDK+ V ++ L MVG+GINDAPA+ AA++GI + S T +A+ AD L
Sbjct: 614 LPEDKVKAVTELNQHAP--LAMVGDGINDAPAMKAASIGIAM---GSGTDVALETADAAL 668
Query: 700 LRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750
N + G+ + SR T + ++QN+ +AL + + ++LG LWL V
Sbjct: 669 THNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAV 719
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 4e-53
Identities = 154/495 (31%), Positives = 246/495 (49%), Gaps = 52/495 (10%)
Query: 237 VSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDR 296
V+D +SVP+ DV+ G + + G+ VPVD E+ QG A + LTGE P + GD
Sbjct: 328 VTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDS 387
Query: 297 IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVL 356
+ G DG ++ +A+ + +TL+RI+++ +AQ +KP++ + D+ + VVVV+
Sbjct: 388 VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVI 447
Query: 357 SLAIALIGPFLFKWSFIGTSVCRGSVYR---ALGLMVAASPCALAVA-PLAYATAISSCA 412
+L A I W F G + VY A +++ A PCAL +A P++ + + A
Sbjct: 448 ALVSAAI------WYFFGPA--PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAA 499
Query: 413 RKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIP 472
G+L++ L ++ T+ FDKTGTLT G A+ K + +
Sbjct: 500 EFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAV----------KTFNGVD---- 545
Query: 473 NCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESG 532
E +AL +AAA+E+G++HP+ RA++D + LP V+ F G G++ G
Sbjct: 546 --EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVN--GFRTLRGLGVSGEAEGHALL 601
Query: 533 TEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEK-VTLIHL 591
L + + ++ +G L+V+ K L+ +
Sbjct: 602 LGNQALLNEQQVDTKALEAEITAQAS--------------QGATPVLLAVDGKAAALLAI 647
Query: 592 EDRPRPGVSDVIAELK--DHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNH 649
D R SD +A L+ A R++MLTGD+ ++A +A GI+EV + P+ K
Sbjct: 648 RDPLR---SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEA 704
Query: 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPF 709
+KR G + MVG+GINDAPALA A VGI + S AI A + L+R+++ GV
Sbjct: 705 IKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMGG-GSDVAIETAAITLMRHSLMGVAD 762
Query: 710 CVAKSRQTTSLVKQN 724
+A SR T +KQN
Sbjct: 763 ALAISRATLRNMKQN 777
|
Length = 834 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 1e-49
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 190 LLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHD 249
++L + + + E + RA +K LK+ P + + + D +P +
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATV---------IRDGKEEEIPADE 51
Query: 250 VEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMI 309
+ VG +L+ G+ VP D + +G+ + LTGE P+E GD + G L G +
Sbjct: 52 LVVGDIVLLKPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELK 111
Query: 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK 369
+ T T ++ L +I +L EEA+ K LQR LD+ + +V+ L++ + LI
Sbjct: 112 VIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIW----- 166
Query: 370 WSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDA 426
F ++ RAL ++VAA P AL +A PLA A A+KGIL+K L+
Sbjct: 167 --FFRGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-37
Identities = 159/681 (23%), Positives = 254/681 (37%), Gaps = 138/681 (20%)
Query: 171 LMAFAAFASIFMGNSLEGG------LLLAMFNLAH-IAEEFFTSRAMVDVKELKENYPDS 223
L+ AA S F+G+ ++ G LL+ + N +E+ RA ++ LK+
Sbjct: 85 LLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEY---RAEKALEALKKMSSPK 141
Query: 224 VLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIE-HL 282
VL D + +P ++ G +L+ AG+ VP D + + + E L
Sbjct: 142 AKVL----------RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESAL 191
Query: 283 TGEVKPLEAKVGDRIPG---------------GARNLDGRMILKATKTWNESTLNRIVQL 327
TGE P+E K + G + GR T E+ +I +L
Sbjct: 192 TGESLPVE-KQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARL 250
Query: 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALG 387
+ K LQR L++ G+ + +VL + ++G F S AL
Sbjct: 251 LPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGL------LESFLTALA 304
Query: 388 LMVAASPCAL-AVAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 446
L VAA P L AV +A A A+ +++ ++ L S I DKTGTLT +
Sbjct: 305 LAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKM 364
Query: 447 MFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAA----------MEKGTTHPIGRA 496
K I G K D + +AAA P A
Sbjct: 365 TVKKIYINGG-----GKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGA 419
Query: 497 VVDHSIGKDLPSVS---------IDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVD 547
+V+ + + + R + + T+ GK + G+ +
Sbjct: 420 LVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIV----KTDEGKYILFVKGAPE 475
Query: 548 FITSLCKSEDES--------RKIKEAVN----------GSSYGRGFVHAALSVNEKVT-- 587
I CKS E R ++EAV +Y + +++
Sbjct: 476 VILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESD 535
Query: 588 -----LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------ 636
L +ED PR V + I EL++ A ++V M+TGDH +A +A GI
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 637 -----------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPA 673
V+ + PE K V+ + G + M G+G+NDAPA
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVE-ALQKSGHVVAMTGDGVNDAPA 653
Query: 674 LAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQ--------NV 725
L AA VGI + + A AD++LL +N + + V + R+ +K+ NV
Sbjct: 654 LKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713
Query: 726 ALALSCIILASLPSVLGFLPL 746
L+ +I + L FLPL
Sbjct: 714 GEVLTLLIYSLF--NLFFLPL 732
|
Length = 917 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 4e-29
Identities = 124/527 (23%), Positives = 224/527 (42%), Gaps = 64/527 (12%)
Query: 179 SIFMGNSLEGGLLLAMFNL------------AHIAEEFFTSRAMVDVKELKENYPDSVLV 226
+I + G LA+FN A+ AE R LK +
Sbjct: 49 TIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAK 108
Query: 227 LNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEV 286
L DD + V P ++ G +LV AG+ +P D EV +G A++ +TGE
Sbjct: 109 LLRDDGAIDKV--------PADQLKKGDIVLVEAGDVIPCDGEVIEGVASVDESAITGES 160
Query: 287 KPLEAKVGD---RIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLD 343
P+ + G + GG R L ++++ T E+ L+R++ L E AQ K + L
Sbjct: 161 APVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIAL- 219
Query: 344 EFGEQYSKVVVVLSLAIALIGPFLFKWS-FIGTSVCRGSVYRALGLMVAASPCALAVAPL 402
+ +++ L+L L+ L+ ++ + G ++ SV + L+V P +
Sbjct: 220 ------TILLIALTLVFLLVTATLWPFAAYGGNAI---SVTVLVALLVCLIPTTIGGLLS 270
Query: 403 AYATA-ISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRS 461
A A + ++ G+ ++A T+ DKTGT+T G + P G
Sbjct: 271 AIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---- 326
Query: 462 KKTHDISCCIPNCEKEALAVAAAMEK-GTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGR 520
+++ LA AA + P G+++V + K L + D +
Sbjct: 327 -------------DEKTLADAAQLASLADDTPEGKSIVI--LAKQL-GIREDDVQSLHAT 370
Query: 521 GLTATVNGIESGT--EGGKELKASLGSVDFITSLCKSEDE--SRKIKEAVNGSSYGRGFV 576
+ T SG + G+ ++ G+VD I ++ + +AV+ + G
Sbjct: 371 FVEFTAQTRMSGINLDNGRMIRK--GAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTP 428
Query: 577 HAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE 636
N +I+L+D + G+ + A+L+ ++ +M+TGD+ +A +A G+++
Sbjct: 429 LVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMG-IKTIMITGDNRLTAAAIAAEAGVDD 487
Query: 637 VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVL 683
PEDK+ +++ + G + M G+G NDAPALA A VG+ +
Sbjct: 488 FIAEATPEDKIALIRQ-EQAEGKLVAMTGDGTNDAPALAQADVGVAM 533
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 4e-29
Identities = 121/472 (25%), Positives = 205/472 (43%), Gaps = 76/472 (16%)
Query: 237 VSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKP-LEAKVGD 295
+D + VP +++ G +LV AGE +P D EV +G A++ +TGE P + GD
Sbjct: 110 RADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGD 169
Query: 296 R--IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVV 353
+ GG R L + ++ T E+ L+R++ L E A+ K + L S +
Sbjct: 170 FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL---LSGLT 226
Query: 354 VVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPC-------ALAVAPLAYAT 406
++ LA+A + PF + G +V AL +V P A+ +A
Sbjct: 227 LIFLLAVATLYPFA---IYSGGGAASVTVLVAL--LVCLIPTTIGGLLSAIGIA------ 275
Query: 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD 466
+ + ++ G+ ++A T+ DKTGT+T G P+ G
Sbjct: 276 GMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV--------- 326
Query: 467 ISCCIPNCEKEALAVAAAME--KGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTA 524
+E LA AA + T P GR++V + K L +
Sbjct: 327 --------SEEELADAAQLASLADET-PEGRSIV--ELAKK-------LGIELREDDLQS 368
Query: 525 TVNGIE-------SGTE--GGKELKASLGSVD----FITSLCKSEDESRKIKEAVNGSSY 571
+ SG + GG+E++ G+VD ++ E + AV+ S
Sbjct: 369 HAEFVPFTAQTRMSGVDLPGGREIRK--GAVDAIRRYVRERGGHIPE--DLDAAVDEVS- 423
Query: 572 GRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN 630
G + N ++ +I+L+D +PG+ + AEL+ ++ +M+TGD+ +A +A
Sbjct: 424 RLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMG-IKTVMITGDNPLTAAAIAA 482
Query: 631 AVGINEVYCSLKPEDKLNHVKRTSRDMGGGLI-MVGEGINDAPALAAATVGI 681
G+++ PEDKL +++ G L+ M G+G NDAPALA A VG+
Sbjct: 483 EAGVDDFIAEATPEDKLALIRQEQA--EGRLVAMTGDGTNDAPALAQADVGV 532
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 98.3 bits (246), Expect = 3e-21
Identities = 121/470 (25%), Positives = 210/470 (44%), Gaps = 74/470 (15%)
Query: 237 VSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPL--EAKVG 294
A VP ++ G +LV AGE +P D EV +G A++ +TGE P+ E+ G
Sbjct: 110 REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVDESAITGESAPVIRESG-G 168
Query: 295 DR--IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNK-PK---LQRWLDEFGEQ 348
D + GG R L ++++ T ES L+R++ L E A+ K P L L
Sbjct: 169 DFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILL------ 222
Query: 349 YSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPC-------ALAVAP 401
+ + ++ L +A + PF ++ G ++ S+ + L+V P A+ +A
Sbjct: 223 -AGLTIIFLLVVATLPPFA---AYSGGAL---SITVLVALLVCLIPTTIGGLLSAIGIA- 274
Query: 402 LAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRS 461
+ + ++ G+ ++A T+ DKTGT+T G P+ G
Sbjct: 275 -----GMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---- 325
Query: 462 KKTHDISCCIPNCEKEALAVAAAME--KGTTHPIGRAVVD---HSIGKDLPSVSIDRFEY 516
+E LA AA + T P GR++V + +
Sbjct: 326 -------------TEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHATF 371
Query: 517 FPGRGLTATVNGIESGTE-GGKELKASLGSVDFITSLCKSEDES--RKIKEAVNGSSYGR 573
P +A SG + G+E++ G+VD I +S ++ AV+ + +
Sbjct: 372 VP---FSAQTR--MSGVDLDGREIRK--GAVDAIRRYVESNGGHFPAELDAAVDEVA-RK 423
Query: 574 GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV 632
G ++ + +V +I+L+D +PG+ + AEL+ ++ +M+TGD+ +A +A
Sbjct: 424 GGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMG-IKTVMITGDNPLTAAAIAAEA 482
Query: 633 GINEVYCSLKPEDKLNHVKRTSRDMGGGLI-MVGEGINDAPALAAATVGI 681
G+++ PEDKL +++ G L+ M G+G NDAPALA A VG+
Sbjct: 483 GVDDFLAEATPEDKLALIRQEQA--EGRLVAMTGDGTNDAPALAQADVGV 530
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 98.2 bits (244), Expect = 4e-21
Identities = 121/536 (22%), Positives = 219/536 (40%), Gaps = 84/536 (15%)
Query: 238 SDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVG--- 294
D +Y + D++ G + V GE +P D +V +G AT+ +TGE P+ + G
Sbjct: 111 QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKESGGDF 170
Query: 295 DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVV 354
D + GG + ++ T S L++++ L E A K + + +
Sbjct: 171 DNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTP---------NEIALFTL 221
Query: 355 VLSLAIALIGPFLFKW---SFIGTSVCRGSVYRALGLMVAASPCAL--AVAPLAYATAIS 409
+++L I + L + F+ ++ ++ +++A + C + + L A I+
Sbjct: 222 LMTLTIIFLVVILTMYPLAKFLNFNL-------SIAMLIALAVCLIPTTIGGLLSAIGIA 274
Query: 410 SCARK---GILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD 466
R IL K G+ ++ + + DKTGT+T G M A P+
Sbjct: 275 GMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAA 334
Query: 467 ISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATV 526
I + E ++ K DLP + EY P T
Sbjct: 335 YESSIADDTPEGRSIVKLAYKQHI--------------DLPQ---EVGEYIPFTAETRMS 377
Query: 527 NGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEA-----------VNGSSYGRGF 575
+ E K S+ +++KEA V G S G
Sbjct: 378 GVKFTTREVYKGAPNSM---------------VKRVKEAGGHIPVDLDALVKGVSKKGGT 422
Query: 576 VHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635
L NE + +I+L+D + G+ + EL++ + +M TGD+E +A +A G++
Sbjct: 423 PLVVLEDNEILGVIYLKDVIKDGLVERFRELREMG-IETVMCTGDNELTAATIAKEAGVD 481
Query: 636 EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVA 695
KPEDK+N ++ + G + M G+G NDAPALA A VG+ + + +A A
Sbjct: 482 RFVAECKPEDKINVIRE-EQAKGHIVAMTGDGTNDAPALAEANVGLAM-NSGTMSAKEAA 539
Query: 696 DVLLLRNNISGVPFCVAKSRQ--------TTSLVKQNVA---LALSCIILASLPSV 740
+++ L +N + + V +Q TT + ++A L + +A++P++
Sbjct: 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAM 595
|
Length = 673 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 8e-21
Identities = 123/518 (23%), Positives = 198/518 (38%), Gaps = 78/518 (15%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH--LTGEVKPLEAKVGDRIPGGAR 302
+P ++ G + + G+ VP DC +++G I ++ LTGE P+ K GD G+
Sbjct: 105 IPASELVPGDVVRLKIGDIVPADCRLFEGD-YIQVDQAALTGESLPVTKKTGDIAYSGST 163
Query: 303 NLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIAL 362
G T T + + L + + LQ+ L + G + ++ L L
Sbjct: 164 VKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIG------LFLIVLIGVL 217
Query: 363 IG-PFLFKWSFIGTSVCRGSVYRALGLMVAASPCAL-AVAPLAYATAISSCARKGILLKG 420
+ + + G S R + AL L+V P A+ AV + A + A+K ++
Sbjct: 218 VLIELVVLFFGRGES-FREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTR 276
Query: 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALA 480
++ LA + DKTGTLT L I P + + A
Sbjct: 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF-------------NGFDKDDVLLYA 323
Query: 481 VAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELK 540
A+ E+ I AV+ + E+ P + E GK K
Sbjct: 324 ALASREEDQ-DAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFK 382
Query: 541 ASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSV---NEK-----VTLIHLE 592
+ G+ I LC ++ E + E RG+ AL V +E+ + L+ L
Sbjct: 383 VTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGY--RALGVARTDEEGRWHFLGLLPLF 440
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDH------------------------------- 621
D PR + I + + V M+TGDH
Sbjct: 441 DPPRHDTKETIERARHLG-VEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDD 499
Query: 622 --ESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLI-MVGEGINDAPALAAAT 678
+ V +A G EV+ PE K V+ G L+ M G+G+NDAPAL A
Sbjct: 500 LPSGLGEMVEDADGFAEVF----PEHKYEIVEILQ--KRGHLVGMTGDGVNDAPALKKAD 553
Query: 679 VGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQ 716
VGI +A A+ A + AD++L +S + + +SR+
Sbjct: 554 VGIAVAG-ATDAARSAADIVLTEPGLSVIVDAILESRK 590
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 2e-16
Identities = 122/601 (20%), Positives = 217/601 (36%), Gaps = 122/601 (20%)
Query: 240 LAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGDRIP 298
LA VP G + + G+ VP D + + +I +LTGE P+ KV IP
Sbjct: 131 LASTLVP------GDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVS-KVTAPIP 183
Query: 299 GGA-----------------RNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRW 341
R G+ I+ T + + + ++ + + K LQ+
Sbjct: 184 AATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGS--NTEFGAVFKMMQAIEKPKTPLQKS 241
Query: 342 LDEFGEQYSKVVVVLSLAIALIGPFLFK-W---SFIGTSVCRGSVYRALGLMVAASPCAL 397
+D G+Q S V + I L+G F K W I S L VAA P L
Sbjct: 242 MDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVS-----------LAVAAIPEGL 290
Query: 398 A-VAPLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTL-----------TTGG 445
+ + A + ++K +++ ++ L S + I DKTGTL T+ G
Sbjct: 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG 350
Query: 446 LMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKD 505
L + + + A++ + R D +G
Sbjct: 351 LHTMLNAVSLN---QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNP 407
Query: 506 LPSVSIDRFEYFPGRGLTATVNGIES---------------GTEGGKELKASLGSVDFIT 550
I+ F L T + + E+ G+ + +
Sbjct: 408 TDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVL 467
Query: 551 SLCKS------------EDESRKIKEAVN--GSSYGRGFVHAALSVNEKVT---LIHLED 593
C + + I+E S+ R A+ ++T L+ + D
Sbjct: 468 KYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGIND 527
Query: 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------------------ 635
PRPGV + + L +R++M+TGD + +A +A +G+
Sbjct: 528 PPRPGVKEAVTTLITGG-VRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQ 586
Query: 636 ---------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQR 686
V+ PE K+ VK + G + M G+G+NDAPAL A +G+ + Q
Sbjct: 587 QLSQIVPKVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQT 645
Query: 687 ASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILA----SLPSVLG 742
+ A AD++L ++ + + + + + + +K + LS + A +L +++G
Sbjct: 646 GTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG 705
Query: 743 F 743
F
Sbjct: 706 F 706
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-10
Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 34/252 (13%)
Query: 213 VKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQ 272
++ LKE + VL ++ DL VP G + + G+ VP D V
Sbjct: 64 IEALKEYESEHAKVLRDGRWSVIKAKDL----VP------GDIVELAVGDKVPADIRVLS 113
Query: 273 GTATITIEH--LTGEVKPLEAKVGDRIPGG-ARNLDGR-MILKATKTWNESTLNRIV--- 325
T+ ++ LTGE + K + +P A N D + M+ T +V
Sbjct: 114 -LKTLRVDQSILTGESVSVN-KHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTG 171
Query: 326 ----------QLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT 375
++ Q + P LQ+ LDEFGE SKV+ ++ + + +I F +G
Sbjct: 172 MSTEIGKIRDEMRAAEQEDTP-LQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGG 230
Query: 376 SVCRGSVYR---ALGLMVAASPCAL-AVAPLAYATAISSCARKGILLKGGQVLDALASCH 431
+G++Y A+ L VAA P L AV A A+K +++ ++ L
Sbjct: 231 GWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTT 290
Query: 432 TIAFDKTGTLTT 443
I DKTGTLTT
Sbjct: 291 VICSDKTGTLTT 302
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 5e-10
Identities = 53/257 (20%), Positives = 84/257 (32%), Gaps = 84/257 (32%)
Query: 432 TIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTH 491
+ FD GTLT G + + L AAA
Sbjct: 3 AVVFDLDGTLTDGE---PVVP---------------------EAEALLEAAAA------- 31
Query: 492 PIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITS 551
+G A+V + E G V + G+EL
Sbjct: 32 -LGVAIVIAA------------GENLTKEGREELVRRLLLRALAGEELL----------- 67
Query: 552 LCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHAR 611
E+ R V + LI L D PG + + ELK+ A
Sbjct: 68 ----EELLRAGATVVAVLDL------------VVLGLIALTDPLYPGAREALKELKE-AG 110
Query: 612 LRVMMLTGDHESSAQRVANAVGINEV---------YCSLKPEDKLNH--VKRTSRDMGGG 660
+++ +LTGD+ +A +A +G+ + KP+ K+ ++
Sbjct: 111 IKLAILTGDNRLTANAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEE- 169
Query: 661 LIMVGEGINDAPALAAA 677
++MVG+G+ND PA AA
Sbjct: 170 VLMVGDGVNDIPAAKAA 186
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-09
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 43/191 (22%)
Query: 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI---NEVYCSL- 641
+ ++ + D PRP V+D I + + A +RV+M+TGD++ +A+ + +GI +E
Sbjct: 529 IGVVGMLDPPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKS 587
Query: 642 ---KPEDKLNHVKRTSRDMGG---------------------GLI--MVGEGINDAPALA 675
+ D++ K+ + G I M G+G+NDAPAL
Sbjct: 588 FTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALK 647
Query: 676 AATVGIVLAQRASATAIA--VADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS--- 730
A +GI + S T +A +D++L +N + + V + R + +KQ + +S
Sbjct: 648 KADIGIAM---GSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
Query: 731 ----CIILASL 737
CI L +
Sbjct: 705 GEVVCIFLTAA 715
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 8e-09
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 29/149 (19%)
Query: 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI-------NE-- 636
+ ++ ++D RPGV + + E + A + V M+TGD+ +A+ +A GI E
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQ-RAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGK 632
Query: 637 ------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAAT 678
V P DK V +DMG + + G+G NDAPAL A
Sbjct: 633 EFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLML-KDMGEVVAVTGDGTNDAPALKLAD 691
Query: 679 VGIVLAQRASATAIAVADVLLLRNNISGV 707
VG + + A +D++LL +N + +
Sbjct: 692 VGFSMGISGTEVAKEASDIILLDDNFASI 720
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-08
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 65/220 (29%)
Query: 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI----NE----- 636
V LI + D PR V D + + + A ++V+M+TGDH +A+ +A VGI NE
Sbjct: 560 VGLISMIDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDI 618
Query: 637 --------------------------------------------VYCSLKPEDKLNHVKR 652
V+ P+ KL V+
Sbjct: 619 AARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEG 678
Query: 653 TSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712
R G + + G+G+ND+PAL A +G+ + S + AD++LL +N + + V
Sbjct: 679 CQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 737
Query: 713 KSRQTTSLVKQNVALALS----------CIILASLPSVLG 742
+ R +K+++A L+ I+A++P LG
Sbjct: 738 EGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLG 777
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 1e-08
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 47/195 (24%)
Query: 584 EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI--------- 634
E + LI + D PR + + E A + V MLTGD +A+ +A VGI
Sbjct: 636 EFLGLIGIYDPPRNESAGAV-EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR 694
Query: 635 ------------------NEVYCSLK----------PEDKLNHVKRTSRDMGGGLIMVGE 666
+E LK P+ K+ ++ R M G+
Sbjct: 695 DEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHR-RKAFCAMTGD 753
Query: 667 GINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTS------- 719
G+ND+P+L A VGI + S A +D++L +N + + + + R+
Sbjct: 754 GVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVL 813
Query: 720 -LVKQNVALALSCII 733
L+ +NVA A+ II
Sbjct: 814 HLLAENVAEAILLII 828
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 8e-08
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSLKPEDKLNHVKRTS 654
VS+ I EL D + + + +GD + S ++A VGI V+ PE K + R
Sbjct: 33 SEVSETIQELHD--MVDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAK-IIREL 89
Query: 655 RDMGGGLIMVGEGINDAPALAAATVGIVLAQR--ASATAIAVADVLL 699
+ ++MVG G ND AL A +GI Q+ + ADV+L
Sbjct: 90 KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-06
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 32/135 (23%)
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----------------- 635
D P+ + + LK + V +LTGD E A +V + VG++
Sbjct: 549 DPPKETTAPALKALKASG-VTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDE 607
Query: 636 --------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRA 687
++ L P K V + G + +G+GINDAPAL AA +GI +
Sbjct: 608 LANLAERTTLFARLTPMHKERIV-TLLKREGHVVGFMGDGINDAPALRAADIGISV---D 663
Query: 688 SATAIA--VADVLLL 700
A IA AD++LL
Sbjct: 664 GAVDIAREAADIILL 678
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 6e-06
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----------------- 635
D P+ + IA L + + V +LTGD+E R+ VGI+
Sbjct: 514 DPPKESTKEAIAALFKNG-INVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEE 572
Query: 636 --------EVYCSLKPEDK---LNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLA 684
++ L P K + +K+ +G +G+GINDAPAL A VGI +
Sbjct: 573 LARELRKYHIFARLTPMQKSRIIGLLKKAGHTVG----FLGDGINDAPALRKADVGISVD 628
Query: 685 QRASATAIAVADVLLLRNNISGVPFCVAKSRQT 717
A A +D++LL ++ + V + R T
Sbjct: 629 TAADIAKEA-SDIILLEKSLMVLEEGVIEGRNT 660
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 7e-06
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 32/152 (21%)
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----------------- 635
D P+ + IA L+++ + V +LTGD+ ++ VG+
Sbjct: 549 DPPKESAAPAIAALRENG-VAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAA 607
Query: 636 --------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRA 687
V+ L P K + V + + G + +G+GINDAPAL A VGI +
Sbjct: 608 LAREVEERTVFAKLTPLQK-SRVLKALQANGHTVGFLGDGINDAPALRDADVGISV---D 663
Query: 688 SATAIA--VADVLLLRNNISGVPFCVAKSRQT 717
S IA AD++LL ++ + V K R+T
Sbjct: 664 SGADIAKESADIILLEKSLMVLEEGVIKGRET 695
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 8e-05
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 23/217 (10%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIE-HLTGEVKPLE-AKVGDRI-PGGA 301
+ +HD+ VG + + G+ VP D G + E +TGE P++ V D G
Sbjct: 180 ISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGT 239
Query: 302 RNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLS--LA 359
+G + T S +++ +A + LQ L E K + + L
Sbjct: 240 VVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLF 299
Query: 360 IALIGPFLF--KWSFIGTSVCRGS-----VYRALGLMVAASPCALAVAPLAYATAISSCA 412
+ L ++F + A+ ++V A P L PLA A++
Sbjct: 300 LVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGL---PLAVTIALAYSM 356
Query: 413 RKGILLKGGQVLDALASCHT------IAFDKTGTLTT 443
+K ++K ++ LA+C T I DKTGTLT
Sbjct: 357 KK--MMKDNNLVRHLAACETMGSATAICSDKTGTLTQ 391
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 94/446 (21%), Positives = 159/446 (35%), Gaps = 82/446 (18%)
Query: 261 GEAVPVDCEVYQGTATITIEHLTGEVKPL------EAKVGDRIPGGARN------LDGRM 308
+ +P D + G+ + LTGE P+ + D G
Sbjct: 260 EKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTK 319
Query: 309 ILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWL---DEFGEQYSK--VVVVLSLAI-AL 362
IL+ ++ IV T +K +L R + ++ K +L LA+ AL
Sbjct: 320 ILQIRPYPGDTGCLAIVVRTG-FSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLAL 378
Query: 363 IGPFLFKWS-FIGTSVCRGS-VYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLK 419
IG F++ I G + R+L ++ P AL + +++ +KGI
Sbjct: 379 IG-FIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCT 437
Query: 420 GGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEAL 479
++ FDKTGTLT GL + ++ + G+ K + S P+ +AL
Sbjct: 438 SPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497
Query: 480 AVAAAM----------------------------EKGTTHPIGRAVVDHSIGKDLPSVSI 511
A ++ E I V ++L S+ I
Sbjct: 498 ATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQEL-SI-I 555
Query: 512 DRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSY 571
RF++ + + E + G+ + I SLC E +E + SY
Sbjct: 556 RRFQFSSALQRMSVIVSTN--DERSPDA-FVKGAPETIQSLCSPETVPSDYQEVLK--SY 610
Query: 572 GR-GF--------------VHAALSVN--------EKVTLIHLEDRPRPGVSDVIAELKD 608
R G+ + A ++ + I E+ +P +VI ELK
Sbjct: 611 TREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR 670
Query: 609 HARLRVMMLTGDHESSAQRVANAVGI 634
A +R +M+TGD+ +A VA GI
Sbjct: 671 -ASIRTVMITGDNPLTAVHVARECGI 695
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|218163 pfam04592, SelP_N, Selenoprotein P, N terminal region | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.003
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 46 KPLNYRPVNCLSHPHINHQHHYHDHH--HHHRHNDCSELSGPQK 87
KP+ P H H +H+H H HH H H H + S Q+
Sbjct: 175 KPVEAEPRQDHPHHHSHHEHQGHAHHHPHGHHHPGSNSHSESQQ 218
|
SelP is the only known eukaryotic selenoprotein that contains multiple selenocysteine (Sec) residues, and accounts for more than 50% of the selenium content of rat and human plasma. It is thought to be glycosylated. SelP may have antioxidant properties. It can attach to epithelial cells, and may protect vascular endothelial cells against peroxynitrite toxicity. The high selenium content of SelP suggests that it may be involved in selenium intercellular transport or storage. The promoter structure of bovine SelP suggest that it may be involved in countering heavy metal intoxication, and may also have a developmental function. The N-terminal region of SelP can exist independently of the C terminal region. Zebrafish selenoprotein Pb lacks the C terminal Sec-rich region, and a protein encoded by the rat SelP gene and lacking this region has also been reported. N-terminal region contains a conserved SecxxCys motif, which is similar to the CysxxCys found in thioredoxins. It is speculated that the N terminal region may adopt a thioredoxin fold and catalyze redox reactions. The N-terminal region also contains a His-rich region, which is thought to mediate heparin binding. Binding to heparan proteoglycans could account for the membrane binding properties of SelP. The function of the bacterial members of this family is uncharcterised. Length = 238 |
| >gnl|CDD|236641 PRK10019, PRK10019, nickel/cobalt efflux protein RcnA; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 57 SHPHINHQHHYHDHHHHHRHNDCSELSGPQKA 88
H H + H H+HHH H H+ E +
Sbjct: 122 HHDHDHDHDHDHEHHHDHGHHHHHEHGATAEE 153
|
Length = 279 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 750 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.96 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.67 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.15 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.05 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.98 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.87 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.77 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.75 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.7 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.66 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.64 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.6 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.6 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.54 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.5 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.48 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.48 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.48 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.46 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.42 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.38 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.35 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.35 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.33 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.31 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.3 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.29 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.2 | |
| PLN02887 | 580 | hydrolase family protein | 98.18 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.14 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.13 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.06 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.97 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.88 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.85 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.77 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.72 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.65 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.62 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.61 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.48 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.48 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.37 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.28 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.18 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.18 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.16 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.98 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.98 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 96.94 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.93 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.85 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.83 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.78 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.71 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.71 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.67 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.65 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.62 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.61 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.55 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.55 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.5 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.43 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 96.42 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.36 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.36 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.35 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.33 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.32 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.27 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.15 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.03 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.98 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.96 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.85 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.8 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.76 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.76 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.67 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.66 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.66 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.54 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.5 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.5 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.46 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.35 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.35 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 95.25 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.94 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.68 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.6 | |
| PLN02940 | 382 | riboflavin kinase | 94.57 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.49 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.47 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.45 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.3 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 94.04 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.89 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.85 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.58 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.5 | |
| PLN02811 | 220 | hydrolase | 93.43 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.08 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 93.0 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.88 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.72 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.57 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.48 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.04 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.64 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.24 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.9 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 90.63 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.8 | |
| PLN02580 | 384 | trehalose-phosphatase | 88.32 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 88.08 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 87.54 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 87.33 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.06 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 86.9 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 86.52 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 85.82 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.25 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 83.6 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.59 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-127 Score=1095.73 Aligned_cols=593 Identities=34% Similarity=0.501 Sum_probs=527.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHhhh
Q 004479 106 REHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNS 185 (750)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g~~ 185 (750)
++.+...++++++++..+... ..+ +...|+++.++++++++.|||||+.+|+.++++++|||+|++++++++|++|.|
T Consensus 89 ~~~~i~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~ 166 (713)
T COG2217 89 RRLIIAGLLTLPLLLLSLGLL-LGA-FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLY 166 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-cch-hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Confidence 334444555666655433222 111 345678889999999999999999999999999999999999999999999998
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEE
Q 004479 186 --------LEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYIL 257 (750)
Q Consensus 186 --------~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~ 257 (750)
.+++++++++.+|+++|.+.+.|+++++++|+++.|++++++++++ ++++||++||++||+|.
T Consensus 167 ~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~---------~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 167 ATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDG---------EEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCC---------cEEEEEHHHCCCCCEEE
Confidence 8899999999999999999999999999999999999999887642 48999999999999999
Q ss_pred EcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCch
Q 004479 258 VGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPK 337 (750)
Q Consensus 258 v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~ 337 (750)
|+|||+||+||+|++|++.||||+|||||.||+|.+||.|++||+|.+|.++++|+++|.||+++||+++++++|.+|+|
T Consensus 238 VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~ 317 (713)
T COG2217 238 VRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAP 317 (713)
T ss_pred ECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCc
Q 004479 338 LQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGI 416 (750)
Q Consensus 338 ~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gi 416 (750)
+||++||++.+|+|.++++++++++ .|++....++..++++++++|+++|||||+++ |+++..++++++|+||
T Consensus 318 iqrlaDr~a~~fvp~vl~ia~l~f~------~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GI 391 (713)
T COG2217 318 IQRLADRVASYFVPVVLVIAALTFA------LWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGI 391 (713)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHH------HHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCce
Confidence 9999999999999999888888754 24444334567799999999999999999997 9999999999999999
Q ss_pred cccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHH
Q 004479 417 LLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRA 496 (750)
Q Consensus 417 lvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~A 496 (750)
|+|+++++|+++++|+++||||||||+|+|+|+++.+.++ + ++++|++++++|++|+||+++|
T Consensus 392 LiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~----------------e~~~L~laAalE~~S~HPiA~A 454 (713)
T COG2217 392 LIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-D----------------EDELLALAAALEQHSEHPLAKA 454 (713)
T ss_pred EEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-C----------------HHHHHHHHHHHHhcCCChHHHH
Confidence 9999999999999999999999999999999999987755 3 7899999999999999999999
Q ss_pred HHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEE
Q 004479 497 VVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFV 576 (750)
Q Consensus 497 i~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 576 (750)
|++++.+++ ...+..|++++|+|+.+.++|.. +..|+++++.+.....+......+ .....|.+.+
T Consensus 455 Iv~~a~~~~--~~~~~~~~~i~G~Gv~~~v~g~~----------v~vG~~~~~~~~~~~~~~~~~~~~--~~~~~G~t~v 520 (713)
T COG2217 455 IVKAAAERG--LPDVEDFEEIPGRGVEAEVDGER----------VLVGNARLLGEEGIDLPLLSERIE--ALESEGKTVV 520 (713)
T ss_pred HHHHHHhcC--CCCccceeeeccCcEEEEECCEE----------EEEcCHHHHhhcCCCccchhhhHH--HHHhcCCeEE
Confidence 999887766 33456699999999999998743 567889888754322211111111 1123466766
Q ss_pred EEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhh
Q 004479 577 HAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRD 656 (750)
Q Consensus 577 ~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~ 656 (750)
+++. +++.+|+++++|++||+++++|++||+ .|++++||||||+.+|++||+++||++++|+++||||+++|++||++
T Consensus 521 ~va~-dg~~~g~i~~~D~~R~~a~~aI~~L~~-~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPedK~~~V~~l~~~ 598 (713)
T COG2217 521 FVAV-DGKLVGVIALADELRPDAKEAIAALKA-LGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPEDKAEIVRELQAE 598 (713)
T ss_pred EEEE-CCEEEEEEEEeCCCChhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcChHhheccCCcHHHHHHHHHHHhc
Confidence 6654 245699999999999999999999999 59999999999999999999999999999999999999999999988
Q ss_pred cCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 657 MGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILAS 736 (750)
Q Consensus 657 ~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~ 736 (750)
|++|+|||||+||+|||++||||||||. |||+|+|+||++|++||++++++++++||+|+++||||++|+++||.+++
T Consensus 599 -g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~i 676 (713)
T COG2217 599 -GRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676 (713)
T ss_pred -CCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 99999999999999999999999999999999999999999999998887
Q ss_pred HHHHhhcccccccC
Q 004479 737 LPSVLGFLPLWLTV 750 (750)
Q Consensus 737 i~~~~G~l~~~~av 750 (750)
.++++|+++||+|+
T Consensus 677 plA~~g~l~p~~A~ 690 (713)
T COG2217 677 PLAAGGLLTPWIAA 690 (713)
T ss_pred HHHHHhhcCHHHHH
Confidence 77888999999873
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-120 Score=1013.85 Aligned_cols=663 Identities=31% Similarity=0.422 Sum_probs=564.1
Q ss_pred ccccccceeccCCCcceeecccccccccCCCcccccccCCCcccccccccccccccccCCcCCCCccHHHHHHHHHhcCh
Q 004479 19 TRSIRLKRVNSLKPTLSFTHPVIRFNFKPLNYRPVNCLSHPHINHQHHYHDHHHHHRHNDCSELSGPQKAVIKFAKATRW 98 (750)
Q Consensus 19 ~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (750)
.+||.+.+|++++.++.|.+++... .-++.++.+......| ....... ...+. ..-++
T Consensus 171 l~gV~~~sv~~~t~~~~V~~~~~~~-~pr~i~k~ie~~~~~~--------~~~~~~~--------~~~~~-----~l~~~ 228 (951)
T KOG0207|consen 171 LRGVKSFSVSLATDTAIVVYDPEIT-GPRDIIKAIEETGFEA--------SVRPYGD--------TTFKN-----SLKHK 228 (951)
T ss_pred ccCeeEEEEeccCCceEEEeccccc-ChHHHHHHHHhhcccc--------eeeeccc--------cchhh-----hhhhh
Confidence 4699999999999999998753322 1122222222111111 0000000 00010 23356
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccccCC-----------CCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCCC
Q 004479 99 LDLANFLREHLQLCCCAAALFLAAAACPYLLP-----------KPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVN 167 (750)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~ 167 (750)
..+.+|.++++..+++++|++++.++++++.+ .+...+++++|.+++++..|||||..||++|++|+.|
T Consensus 229 ~ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~n 308 (951)
T KOG0207|consen 229 EEIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSAN 308 (951)
T ss_pred hHHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcCCCC
Confidence 67788889999999999999998877765433 2223567888899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCC
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLA---------------MFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDD 232 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~---------------~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~ 232 (750)
||+|++++++++|+++.+.++..++. ++.+++++|...+.|+..++.+|+++.|.++.++.++.
T Consensus 309 MdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~- 387 (951)
T KOG0207|consen 309 MDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGS- 387 (951)
T ss_pred ceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCC-
Confidence 99999999999999998777665555 88999999999999999999999999999999998773
Q ss_pred CCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEE
Q 004479 233 NLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKA 312 (750)
Q Consensus 233 ~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v 312 (750)
.+++||++.|++||+|.|.||++||+||+|++|+++||||++|||++||.|++|++|.+||+|.+|.+.+++
T Consensus 388 --------~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~Vka 459 (951)
T KOG0207|consen 388 --------EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKA 459 (951)
T ss_pred --------cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEE
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc----chhhhHHHHHHHH
Q 004479 313 TKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT----SVCRGSVYRALGL 388 (750)
Q Consensus 313 ~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~----~~~~~~~~~al~v 388 (750)
|++|.||++++|++++++||.+|+|+|+++||++.||+|++++++++++++.+++..|.+... ..+..++..++++
T Consensus 460 T~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisV 539 (951)
T KOG0207|consen 460 TKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISV 539 (951)
T ss_pred EeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheE
Confidence 999999999999999999999999999999999999999999999999887766665544333 4566789999999
Q ss_pred HHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCcccc
Q 004479 389 MVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDI 467 (750)
Q Consensus 389 lv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~ 467 (750)
++++|||+|+++ |++++.|.+..+++|+|+|+++.||.+.++++|+||||||||+|+|.|+++....+.
T Consensus 540 lviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------- 609 (951)
T KOG0207|consen 540 LVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------- 609 (951)
T ss_pred EEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----------
Confidence 999999999998 999999999999999999999999999999999999999999999999999876542
Q ss_pred ccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCC--CCCccccceeeecCCe--EEEEEeCeeeccCCCceeeecc
Q 004479 468 SCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKD--LPSVSIDRFEYFPGRG--LTATVNGIESGTEGGKELKASL 543 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~--~~~~~~~~~~~~~g~g--~~~~v~~~~~~~~~~~~~~~~k 543 (750)
.+..+.|.++++.|..|+||+++||++|+++.. .+...+.+|+++||+| +.+.+++.+ ...
T Consensus 610 -----~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~----------i~i 674 (951)
T KOG0207|consen 610 -----ISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNE----------VLI 674 (951)
T ss_pred -----ccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeE----------Eee
Confidence 248899999999999999999999999997765 3445577899999999 555555532 567
Q ss_pred CchHHHhhhccChhHHHHHHHHhc-ccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCH
Q 004479 544 GSVDFITSLCKSEDESRKIKEAVN-GSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622 (750)
Q Consensus 544 Gs~~~i~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~ 622 (750)
|+.+++.+......+. +..... .+..|.+.+++++ +++.+|++.++|++|||+..+|+.||+ .|++++||||||.
T Consensus 675 GN~~~~~r~~~~~~~~--i~~~~~~~e~~g~tvv~v~v-n~~l~gv~~l~D~vr~~a~~av~~Lk~-~Gi~v~mLTGDn~ 750 (951)
T KOG0207|consen 675 GNKEWMSRNGCSIPDD--ILDALTESERKGQTVVYVAV-NGQLVGVFALEDQVRPDAALAVAELKS-MGIKVVMLTGDND 750 (951)
T ss_pred chHHHHHhcCCCCchh--HHHhhhhHhhcCceEEEEEE-CCEEEEEEEeccccchhHHHHHHHHHh-cCceEEEEcCCCH
Confidence 9999987654433211 222222 2234667777765 467799999999999999999999999 5999999999999
Q ss_pred HHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecC
Q 004479 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRN 702 (750)
Q Consensus 623 ~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~ 702 (750)
.+|+++|+++||++|||+++|+||.++|+++|++ |++|+|||||+||+|||++|||||+||. |+|+|+|+|||+||++
T Consensus 751 ~aA~svA~~VGi~~V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig~-gs~vAieaADIVLmrn 828 (951)
T KOG0207|consen 751 AAARSVAQQVGIDNVYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIGA-GSDVAIEAADIVLMRN 828 (951)
T ss_pred HHHHHHHHhhCcceEEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeecc-ccHHHHhhCCEEEEcc
Confidence 9999999999999999999999999999999998 8999999999999999999999999997 7999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 703 NISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGF 743 (750)
Q Consensus 703 ~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~ 743 (750)
||.+++.+++++|+++++||+|+.|++.||++.+.+++.+|
T Consensus 829 ~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF 869 (951)
T KOG0207|consen 829 DLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVF 869 (951)
T ss_pred chhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecc
Confidence 99999999999999999999999999999976443343333
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-104 Score=931.05 Aligned_cols=557 Identities=32% Similarity=0.515 Sum_probs=502.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHCCCC-ChHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 141 FLAVAFPLVGVSASLDALTDIAGGKV-NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKEN 219 (750)
Q Consensus 141 ~~~~~~~~~g~~~~~~a~~~l~~~~~-~~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~ 219 (750)
+++..+++.||||+++||+.+++|++ |||+|+++|+++++++|.|.+++++++++.+++++|.|.+.|+++.+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l 240 (741)
T PRK11033 161 AFIATTLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL 240 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33345578999999999999999884 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCC
Q 004479 220 YPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPG 299 (750)
Q Consensus 220 ~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~a 299 (750)
.|++++++|+| ++++|++++|+|||+|+|+|||+||+||+|++|++.||||+|||||.|++|++||.||+
T Consensus 241 ~p~~a~vir~g----------~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~a 310 (741)
T PRK11033 241 VPETATRLRDG----------EREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPA 310 (741)
T ss_pred CCCEEEEEECC----------EEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeecc
Confidence 99999999977 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhh
Q 004479 300 GARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCR 379 (750)
Q Consensus 300 Gt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~ 379 (750)
||+|.+|.++++|+++|.+|+++||.+++++++.+|+|+|+++|+++++|+|++++++++++++.++++ ...+.
T Consensus 311 Gt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~------~~~~~ 384 (741)
T PRK11033 311 GATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF------AAPWQ 384 (741)
T ss_pred CCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCCHH
Confidence 999999999999999999999999999999999999999999999999999999999998865532222 12456
Q ss_pred hHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcc
Q 004479 380 GSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW 458 (750)
Q Consensus 380 ~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~ 458 (750)
.++++++++|+++|||||+++ |+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|+++.+.++..
T Consensus 385 ~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~ 464 (741)
T PRK11033 385 EWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS 464 (741)
T ss_pred HHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC
Confidence 689999999999999999997 9999999999999999999999999999999999999999999999999998765432
Q ss_pred cccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCce
Q 004479 459 IRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKE 538 (750)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~ 538 (750)
+++++.+++++|+++.||+++||++++..++.+.....+++..+|+|+.+.++|..
T Consensus 465 ----------------~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~-------- 520 (741)
T PRK11033 465 ----------------ESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGER-------- 520 (741)
T ss_pred ----------------HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEE--------
Confidence 67889999999999999999999999987766655677899999999999887643
Q ss_pred eeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEec
Q 004479 539 LKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLT 618 (750)
Q Consensus 539 ~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlT 618 (750)
+..|+++++.+. ..+....+.+ ....|.+.++++. ++..+|++.++|++|||++++|++||+ .|++++|+|
T Consensus 521 --~~ig~~~~~~~~--~~~~~~~~~~---~~~~g~~~v~va~-~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llT 591 (741)
T PRK11033 521 --VLICAPGKLPPL--ADAFAGQINE---LESAGKTVVLVLR-NDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLT 591 (741)
T ss_pred --EEEecchhhhhc--cHHHHHHHHH---HHhCCCEEEEEEE-CCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEc
Confidence 456888887541 1111111111 1245667777654 355699999999999999999999999 699999999
Q ss_pred CCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEE
Q 004479 619 GDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVL 698 (750)
Q Consensus 619 GD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADiv 698 (750)
||++.+|.++|+++||+ ++++++|+||.++|+++|+. +.|+|||||+||+|||++|||||+||. ++++++++||++
T Consensus 592 Gd~~~~a~~ia~~lgi~-~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adiv 667 (741)
T PRK11033 592 GDNPRAAAAIAGELGID-FRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAA 667 (741)
T ss_pred CCCHHHHHHHHHHcCCC-eecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEE
Confidence 99999999999999996 78999999999999999854 689999999999999999999999996 899999999999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 004479 699 LLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750 (750)
Q Consensus 699 L~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~l~~~~av 750 (750)
++++++..|++++++||+++++||||+.|+++||++++.++++|+++||+|+
T Consensus 668 l~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~ 719 (741)
T PRK11033 668 LTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAV 719 (741)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999999999999999999999999988877889999999863
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-99 Score=906.13 Aligned_cols=561 Identities=29% Similarity=0.447 Sum_probs=494.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHhh----------------hHH-HHHHHHHHHHHHHH
Q 004479 139 NAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGN----------------SLE-GGLLLAMFNLAHIA 201 (750)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g~----------------~~~-~~~i~~~~~l~~~~ 201 (750)
.++++++++++|+||+++||+++++|++|||+|++++++++|++|. |++ ++++++++.+|+++
T Consensus 223 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~l 302 (834)
T PRK10671 223 GLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302 (834)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999999999998752 444 67888899999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeecc
Q 004479 202 EEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH 281 (750)
Q Consensus 202 e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~ 281 (750)
|.+.+.|+++.+++|.++.|++++++|+| ++++|++++|+|||+|+|+|||+||+||+|++|++.||||+
T Consensus 303 e~~~~~~~~~~~~~L~~l~p~~a~~~~~~----------~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~ 372 (834)
T PRK10671 303 EARARQRSSKALEKLLDLTPPTARVVTDE----------GEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAM 372 (834)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeCC----------cEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehh
Confidence 99999999999999999999999999876 67899999999999999999999999999999999999999
Q ss_pred ccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHH
Q 004479 282 LTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIA 361 (750)
Q Consensus 282 LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ 361 (750)
|||||.|+.|++||.||+||+|.+|.+.++|+++|.+|+++||.+++++++.+|+++|+++|+++++|+|++++++++++
T Consensus 373 lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~ 452 (834)
T PRK10671 373 LTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSA 452 (834)
T ss_pred hcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888765
Q ss_pred HHhhhhhhhccccc-chhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCC
Q 004479 362 LIGPFLFKWSFIGT-SVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTG 439 (750)
Q Consensus 362 ii~~~~~~~~~~~~-~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTG 439 (750)
++ |++.+. ..+...+.+++++|+++|||||+++ |+++..++++++|+||++|+++++|+++++|++||||||
T Consensus 453 ~~------~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTG 526 (834)
T PRK10671 453 AI------WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTG 526 (834)
T ss_pred HH------HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCC
Confidence 43 222221 1234567889999999999999997 999999999999999999999999999999999999999
Q ss_pred CCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecC
Q 004479 440 TLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPG 519 (750)
Q Consensus 440 TLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g 519 (750)
|||+|+|+|.++.+..+.. +++++.+++++|.+++||+++||++++.+.. ...+.+|++.+|
T Consensus 527 TLT~g~~~v~~~~~~~~~~----------------~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~--~~~~~~~~~~~g 588 (834)
T PRK10671 527 TLTEGKPQVVAVKTFNGVD----------------EAQALRLAAALEQGSSHPLARAILDKAGDMT--LPQVNGFRTLRG 588 (834)
T ss_pred ccccCceEEEEEEccCCCC----------------HHHHHHHHHHHhCCCCCHHHHHHHHHHhhCC--CCCcccceEecc
Confidence 9999999999987665432 6778999999999999999999999886443 345678999999
Q ss_pred CeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhH
Q 004479 520 RGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGV 599 (750)
Q Consensus 520 ~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a 599 (750)
+|+.+.++|.. +.+|+++++.+.....+..+...+. ....|.+.++++. ++..+|.+.++|++||++
T Consensus 589 ~Gv~~~~~g~~----------~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~v~va~-~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 589 LGVSGEAEGHA----------LLLGNQALLNEQQVDTKALEAEITA--QASQGATPVLLAV-DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred eEEEEEECCEE----------EEEeCHHHHHHcCCChHHHHHHHHH--HHhCCCeEEEEEE-CCEEEEEEEccCcchhhH
Confidence 99998876632 4679999886543322211111111 1234666666654 345699999999999999
Q ss_pred HHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCc
Q 004479 600 SDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 600 ~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdV 679 (750)
+++|++|++ .|++++|+|||++.+|+++++++||+++|+++.|++|.+.++.++++ |+.|+|+|||+||+|||++||+
T Consensus 656 ~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 656 VAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADV 733 (834)
T ss_pred HHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCe
Confidence 999999999 59999999999999999999999999999999999999999999988 8999999999999999999999
Q ss_pred cEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hh-ccccccc
Q 004479 680 GIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV------LG-FLPLWLT 749 (750)
Q Consensus 680 GIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~------~G-~l~~~~a 749 (750)
||+||. +++.++++||++++++++..|++++++||+++++|+||+.|+++||++++.+++ +| ++|||+|
T Consensus 734 gia~g~-g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 734 GIAMGG-GSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred eEEecC-CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHH
Confidence 999996 899999999999999999999999999999999999999999999977644443 35 5787765
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-99 Score=867.15 Aligned_cols=538 Identities=32% Similarity=0.474 Sum_probs=483.1
Q ss_pred HhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 149 VGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMG-----------------NSLEGGLLLAMFNLAHIAEEFFTSRAMV 211 (750)
Q Consensus 149 ~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g-----------------~~~~~~~i~~~~~l~~~~e~~~~~ra~~ 211 (750)
+||||+++||+++++|++|||+|++++++++|++| +|.+++++++++.+++++|.+.++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999863 2344567788889999999999999999
Q ss_pred HHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEee
Q 004479 212 DVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEA 291 (750)
Q Consensus 212 ~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k 291 (750)
.+++|.++.|++++++|+++ ++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~~---------~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k 151 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKDG---------SIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPK 151 (562)
T ss_pred HHHHHHhcCCCEEEEEECCC---------eEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEc
Confidence 99999999999999998753 678999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhc
Q 004479 292 KVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWS 371 (750)
Q Consensus 292 ~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~ 371 (750)
++||.||+||+|.+|.++++|+++|.+|+++||.+++++++.+|+|+|+++|+++++|+|++++++++++++ |.
T Consensus 152 ~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~------~~ 225 (562)
T TIGR01511 152 KVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVI------WL 225 (562)
T ss_pred CCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH------HH
Confidence 999999999999999999999999999999999999999999999999999999999999988887766332 32
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEE
Q 004479 372 FIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKA 450 (750)
Q Consensus 372 ~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~ 450 (750)
.++.+++++++++|||||+++ |+++..++++++|+||++|+++++|+|+++|++|||||||||+|+|+|++
T Consensus 226 --------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~ 297 (562)
T TIGR01511 226 --------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTD 297 (562)
T ss_pred --------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEE
Confidence 268999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCee
Q 004479 451 IEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIE 530 (750)
Q Consensus 451 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~ 530 (750)
+.+.++.. +++++.+++++|++|+||+++||++++.+++.+...+.++++.+|+|+.+.+++.+
T Consensus 298 i~~~~~~~----------------~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~ 361 (562)
T TIGR01511 298 VHVFGDRD----------------RTELLALAAALEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTK 361 (562)
T ss_pred EecCCCCC----------------HHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEE
Confidence 97664432 67889999999999999999999999977766555678999999999999987743
Q ss_pred eccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcC
Q 004479 531 SGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHA 610 (750)
Q Consensus 531 ~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~a 610 (750)
+.+|+++++.+.....++. ...|.+.+++.. ++..+|.+.++|++||+++++|++||+ .
T Consensus 362 ----------~~iG~~~~~~~~~~~~~~~---------~~~g~~~~~~~~-~~~~~g~~~~~d~l~~~a~e~i~~Lk~-~ 420 (562)
T TIGR01511 362 ----------IQLGNEKLLGENAIKIDGK---------AEQGSTSVLVAV-NGELAGVFALEDQLRPEAKEVIQALKR-R 420 (562)
T ss_pred ----------EEEECHHHHHhCCCCCChh---------hhCCCEEEEEEE-CCEEEEEEEecccccHHHHHHHHHHHH-c
Confidence 5689999875432211110 123556665543 355699999999999999999999999 5
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHH
Q 004479 611 RLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASAT 690 (750)
Q Consensus 611 gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~ 690 (750)
|++++|+|||+..+++++++++||+ +|+++.|++|.++++.++++ ++.|+|+|||.||+||+++|||||+||. +++.
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g~-g~~~ 497 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN-VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIGA-GTDV 497 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc-EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeCC-cCHH
Confidence 9999999999999999999999997 99999999999999999987 8999999999999999999999999995 7899
Q ss_pred HHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh-ccccccc
Q 004479 691 AIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV-----LG-FLPLWLT 749 (750)
Q Consensus 691 A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~-----~G-~l~~~~a 749 (750)
++++||++++++++..+++++++||+++++|+||+.|+++||++.+.+++ +| +++||.|
T Consensus 498 a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~g~~~~p~~a 562 (562)
T TIGR01511 498 AIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPIGILLSPAVA 562 (562)
T ss_pred HHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCcC
Confidence 99999999999999999999999999999999999999999988766666 34 4677765
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-98 Score=881.39 Aligned_cols=530 Identities=25% Similarity=0.334 Sum_probs=456.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++|+|.+++++++++.++..++.+.++|+++.+++|.++.|.+++|+|+| ++++|+++
T Consensus 39 ~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg----------~~~~I~~~ 108 (755)
T TIGR01647 39 SWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDG----------KWQEIPAS 108 (755)
T ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC----------EEEEEEhh
Confidence 56667888999999999999999999999988999999999999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
||+|||+|.|++||+|||||+|++|+ ..||||+|||||.|+.|.+|+.+|+||.+.+|.++++|+++|.+|++|||.++
T Consensus 109 ~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~l 188 (755)
T TIGR01647 109 ELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAAL 188 (755)
T ss_pred hCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHH
Confidence 99999999999999999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.+++++.++++++++++++++++. .+....++..++..++++++++|||+|+++ |++++.
T Consensus 189 v~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 189 VQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVL------FFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 9999989999999999999999988877776654332 221123466789999999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHH-
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAM- 485 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~- 485 (750)
++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++++.++. .++++++.+++.+
T Consensus 263 g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~~~l~~a~~~~ 327 (755)
T TIGR01647 263 GAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG---------------FDKDDVLLYAALAS 327 (755)
T ss_pred HHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC---------------CCHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999765321 0255677777755
Q ss_pred hcCCCCchHHHHHhhhcCCC-----CCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-H
Q 004479 486 EKGTTHPIGRAVVDHSIGKD-----LPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-S 559 (750)
Q Consensus 486 e~~s~hP~~~Ai~~~~~~~~-----~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~ 559 (750)
+..+.||+++|+++++.+.+ ++.....+|++ .++++.+.+.+. .+++.+.++||+++.+.+.|+...+ .
T Consensus 328 ~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~-~~k~~~~~v~~~----~~g~~~~~~kGa~e~il~~c~~~~~~~ 402 (755)
T TIGR01647 328 REEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDP-VDKRTEATVEDP----ETGKRFKVTKGAPQVILDLCDNKKEIE 402 (755)
T ss_pred CCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCC-CCCeEEEEEEeC----CCceEEEEEeCChHHHHHhcCCcHHHH
Confidence 47889999999999875432 22222223332 366666666531 1356677899999999999975422 2
Q ss_pred HHHHHHh-cccCCCCcEEEEeecc-C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 560 RKIKEAV-NGSSYGRGFVHAALSV-N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 560 ~~~~~~~-~~~~~g~~~~~~~~~~-~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
+++.+.. .....|.+++.++... + ..+|+++|+||+|||++++|++||+ +|++++|+||||+.||+++|+++||
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCC
Confidence 2222222 1234566777766522 2 3599999999999999999999999 7999999999999999999999999
Q ss_pred ce------------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeC
Q 004479 635 NE------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 635 ~~------------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg 684 (750)
.+ +|||++|+||.++|+.||++ |++|+|+|||+||+|||++||||||||
T Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm~ 560 (755)
T TIGR01647 482 GTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAVA 560 (755)
T ss_pred CCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEec
Confidence 75 99999999999999999998 999999999999999999999999999
Q ss_pred CCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 685 QRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 685 ~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
+ |+|+|+++||++|++|||+.|++++++||++++||+||+.|.++.|+..++
T Consensus 561 ~-gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 561 G-ATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred C-CcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 5 999999999999999999999999999999999999999999998875443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-94 Score=860.62 Aligned_cols=537 Identities=21% Similarity=0.269 Sum_probs=449.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.++++++|++++|.+++++++++.++..++.++++|+++.+++|.++.|.+++|+|++..+ .+|++++|+++
T Consensus 106 ~~lL~~aa~ls~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~----~~g~~~~I~~~ 181 (902)
T PRK10517 106 NILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDK----GENGWLEIPID 181 (902)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccC----CCCeEEEEEHH
Confidence 55666888889999999999999999999999999999999999999999999999999985210 01278999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccCC-------------ccCCCceecceeEEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGD-------------RIPGGARNLDGRMILKATK 314 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~-------------~v~aGt~~~~G~~~v~v~~ 314 (750)
||+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|++
T Consensus 182 eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~a 261 (902)
T PRK10517 182 QLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIA 261 (902)
T ss_pred hCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEE
Confidence 999999999999999999999999975 99999999999999999885 5999999999999999999
Q ss_pred eccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhh
Q 004479 315 TWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASP 394 (750)
Q Consensus 315 ~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P 394 (750)
+|.+|.+|+|.+++++++.+++|+|+.++++++++.+++++++.+++++.. +.. .++..++..++++++++||
T Consensus 262 tG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~------~~~-~~~~~~l~~alsv~V~~~P 334 (902)
T PRK10517 262 TGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING------YTK-GDWWEAALFALSVAVGLTP 334 (902)
T ss_pred eccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH------Hhc-CCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999998887777665543321 111 2456678899999999999
Q ss_pred hhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCc
Q 004479 395 CALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPN 473 (750)
Q Consensus 395 ~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 473 (750)
|+||++ +++++.|..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++....+.
T Consensus 335 e~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~---------------- 398 (902)
T PRK10517 335 EMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK---------------- 398 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC----------------
Confidence 999997 999999999999999999999999999999999999999999999999987543222
Q ss_pred cHHHHHHHHHHH---hcCCCCchHHHHHhhhcCCC-C----CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCc
Q 004479 474 CEKEALAVAAAM---EKGTTHPIGRAVVDHSIGKD-L----PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGS 545 (750)
Q Consensus 474 ~~~~~l~~~a~~---e~~s~hP~~~Ai~~~~~~~~-~----~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs 545 (750)
..++++.+++.. +....||++.|++.++.... . ....+.+++|.+.++.++++... .++.++.+.||+
T Consensus 399 ~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~----~~~~~~~~~KGa 474 (902)
T PRK10517 399 TSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAE----NTEHHQLICKGA 474 (902)
T ss_pred CHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEE----CCCeEEEEEeCc
Confidence 145566655432 23467999999999875432 1 11223344555555555544321 144567899999
Q ss_pred hHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec---------------cCceEEEEEecCCCchh
Q 004479 546 VDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS---------------VNEKVTLIHLEDRPRPG 598 (750)
Q Consensus 546 ~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~---------------~~~~lG~i~~~D~lr~~ 598 (750)
+|.+.++|... +..+++.+.. .....|.+++.++.. +...+|+++|+||+|||
T Consensus 475 ~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~ 554 (902)
T PRK10517 475 LEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKET 554 (902)
T ss_pred hHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhh
Confidence 99999998642 1112222211 123456666665531 11349999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------------eEEecCCHhhHHHHHHHH
Q 004479 599 VSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------EVYCSLKPEDKLNHVKRT 653 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------~v~a~~~P~~K~~~V~~l 653 (750)
++++|++||+ +|++++|+||||+.||.+||+++||+ +||||++|+||.++|+.|
T Consensus 555 a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~L 633 (902)
T PRK10517 555 TAPALKALKA-SGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLL 633 (902)
T ss_pred HHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHH
Confidence 9999999999 79999999999999999999999997 799999999999999999
Q ss_pred HhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 654 SRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCII 733 (750)
Q Consensus 654 ~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~ 733 (750)
|++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+||++|||+.|++++++||++++||++++.|.++.|+
T Consensus 634 q~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~ 711 (902)
T PRK10517 634 KRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 711 (902)
T ss_pred HHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 998 999999999999999999999999999 599999999999999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 004479 734 LASLPS 739 (750)
Q Consensus 734 ~~~i~~ 739 (750)
..++..
T Consensus 712 ~~v~~~ 717 (902)
T PRK10517 712 GNVFSV 717 (902)
T ss_pred HHHHHH
Confidence 655443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-93 Score=855.89 Aligned_cols=528 Identities=20% Similarity=0.256 Sum_probs=444.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE------cCCCCCCCcCCCcE
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLN------VDDDNLPDVSDLAY 242 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r------~~~~~~~~~~~~~~ 242 (750)
..++.++++.+++.++|.+++++++++.++..++.+.++|+++++++|.++.+.+++|+| +| ++
T Consensus 72 ~~iL~~~a~ls~~~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg----------~~ 141 (867)
T TIGR01524 72 IYILAMLMGVSYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNG----------SM 141 (867)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCC----------eE
Confidence 445567888889999999999999999999999999999999999999999999999999 44 89
Q ss_pred EEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccCC-------------ccCCCceecceeE
Q 004479 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGD-------------RIPGGARNLDGRM 308 (750)
Q Consensus 243 ~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~-------------~v~aGt~~~~G~~ 308 (750)
++|+++||+|||+|.+++||+|||||+|++|+. .||||+|||||.|++|.+|+ .+|+||.+.+|.+
T Consensus 142 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~ 221 (867)
T TIGR01524 142 DEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHA 221 (867)
T ss_pred EEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEE
Confidence 999999999999999999999999999999985 99999999999999999875 5999999999999
Q ss_pred EEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHH
Q 004479 309 ILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGL 388 (750)
Q Consensus 309 ~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~v 388 (750)
+++|+++|.+|.+|||.+++++ +..++|+|+.++++++++.+++++++++++++ |.+.. .++..++..++++
T Consensus 222 ~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~------~~~~~-~~~~~~~~~al~l 293 (867)
T TIGR01524 222 QAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMI------NGLMK-GDWLEAFLFALAV 293 (867)
T ss_pred EEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheeh------HHHhc-CCHHHHHHHHHHH
Confidence 9999999999999999999988 77789999999999999988877776655332 21111 2456678999999
Q ss_pred HHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCcccc
Q 004479 389 MVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDI 467 (750)
Q Consensus 389 lv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~ 467 (750)
++++|||+|+++ |++++.+..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++.+..+..
T Consensus 294 ~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~--------- 364 (867)
T TIGR01524 294 AVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGET--------- 364 (867)
T ss_pred HHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCC---------
Confidence 999999999997 9999999999999999999999999999999999999999999999999986543321
Q ss_pred ccCCCccHHHHHHHHHH---HhcCCCCchHHHHHhhhcCCCC-----CCccccceeeecCCeEEE-EEeCeeeccCCCce
Q 004479 468 SCCIPNCEKEALAVAAA---MEKGTTHPIGRAVVDHSIGKDL-----PSVSIDRFEYFPGRGLTA-TVNGIESGTEGGKE 538 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~---~e~~s~hP~~~Ai~~~~~~~~~-----~~~~~~~~~~~~g~g~~~-~v~~~~~~~~~~~~ 538 (750)
.++++.+++. .+..+.||+++|+++++.+... ....+..+++.+.++.++ .+.+ .++.+
T Consensus 365 -------~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~-----~~~~~ 432 (867)
T TIGR01524 365 -------SERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVEN-----RAEVT 432 (867)
T ss_pred -------HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEc-----CCceE
Confidence 4556665542 2334679999999998754311 111233344444454444 4443 13356
Q ss_pred eeeccCchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec------------cC---ceEEEEEe
Q 004479 539 LKASLGSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS------------VN---EKVTLIHL 591 (750)
Q Consensus 539 ~~~~kGs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~------------~~---~~lG~i~~ 591 (750)
+.+.||+++.+.++|... +..+++.+.. .....|.+++.++.. .+ ..+|+++|
T Consensus 433 ~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l 512 (867)
T TIGR01524 433 RLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGF 512 (867)
T ss_pred EEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEe
Confidence 789999999999988642 1112222222 123456666666541 11 24999999
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------------eEEecCCHhhH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------EVYCSLKPEDK 646 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------~v~a~~~P~~K 646 (750)
+||+|||++++|++||+ +|++++|+||||+.||.+||+++||. +||||++|+||
T Consensus 513 ~Dp~R~~~~~aI~~l~~-aGI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 513 LDPPKESTKEAIAALFK-NGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred eCCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 99999999999999999 79999999999999999999999998 79999999999
Q ss_pred HHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004479 647 LNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVA 726 (750)
Q Consensus 647 ~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~ 726 (750)
.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+||++|||+.|++++++||++++||+||+.
T Consensus 592 ~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~ 669 (867)
T TIGR01524 592 SRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669 (867)
T ss_pred HHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 999999999999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 004479 727 LALSCIILASLP 738 (750)
Q Consensus 727 ~al~~~~~~~i~ 738 (750)
|.++.|+..++.
T Consensus 670 ~~ls~n~~~~~~ 681 (867)
T TIGR01524 670 MTASSNFGNVFS 681 (867)
T ss_pred HHHhhhHHHHHH
Confidence 999877655544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-94 Score=820.00 Aligned_cols=491 Identities=21% Similarity=0.300 Sum_probs=404.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceE-EEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEE
Q 004479 193 AMFNLAHIAEEFFTSRAMVDVKELKENYPD-SVL-VLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEV 270 (750)
Q Consensus 193 ~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~-v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~v 270 (750)
+...++.+.|.+.+.|+++++++|+++.|+ +++ |.|+| ++++|++++|+|||+|.|++||+||+||+|
T Consensus 74 ~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg----------~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~v 143 (673)
T PRK14010 74 LTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDG----------SYEMIDASDLKKGHIVRVATGEQIPNDGKV 143 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCC----------EEEEEEHHHcCCCCEEEECCCCcccCCeEE
Confidence 334568888999999999999999999986 786 56665 789999999999999999999999999999
Q ss_pred EeceeeeeeccccCCcceEeeccC---CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHh
Q 004479 271 YQGTATITIEHLTGEVKPLEAKVG---DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGE 347 (750)
Q Consensus 271 l~G~~~Vdes~LTGEs~pv~k~~g---~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~ 347 (750)
++|++.||||+|||||.|+.|++| +.||+||.|.+|.++++|+++|.+|.++||.+++++++.+|+|+|.....+..
T Consensus 144 ieG~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 144 IKGLATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred EEcceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 999999999999999999999999 88999999999999999999999999999999999999999999976555432
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHh
Q 004479 348 QYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDA 426 (750)
Q Consensus 348 ~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~ 426 (750)
.+. +.++++++. + +++.....+...+...+++++.+|||+|+.+ |++...|+.+++|+|+++|+++++|+
T Consensus 224 ~l~-----ii~l~~~~~--~--~~~~~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~ 294 (673)
T PRK14010 224 TLT-----IIFLVVILT--M--YPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVET 294 (673)
T ss_pred HHh-----HHHHHHHHH--H--HHHHhhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHH
Confidence 221 111111110 1 1010001223356677888888999999876 99999999999999999999999999
Q ss_pred hccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCC
Q 004479 427 LASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL 506 (750)
Q Consensus 427 lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~ 506 (750)
+|++|++|||||||||+|++.+.++.+.++.. .++++..++.++..+.||+++||++++++.++
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~----------------~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~ 358 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFIPVKSSS----------------FERLVKAAYESSIADDTPEGRSIVKLAYKQHI 358 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEEeCCCcc----------------HHHHHHHHHHhcCCCCChHHHHHHHHHHHcCC
Confidence 99999999999999999999888876654332 56688888888899999999999999876544
Q ss_pred CCc-cccc-eeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----hHHHHHHHHhcccCCCCcEEEEe
Q 004479 507 PSV-SIDR-FEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-----DESRKIKEAVNGSSYGRGFVHAA 579 (750)
Q Consensus 507 ~~~-~~~~-~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~ 579 (750)
... ...+ .++.+.++.+++..+ ++ .+.||+++++.+.|... .+.++..+.. ...|.+.++++
T Consensus 359 ~~~~~~~~~~pF~~~~k~~gv~~~-------g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~--a~~G~~~l~v~ 427 (673)
T PRK14010 359 DLPQEVGEYIPFTAETRMSGVKFT-------TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGV--SKKGGTPLVVL 427 (673)
T ss_pred CchhhhcceeccccccceeEEEEC-------CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHH--HhCCCeEEEEE
Confidence 321 1112 233344555554321 11 35699999999888632 1111111111 23455655554
Q ss_pred eccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCC
Q 004479 580 LSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 580 ~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
. +...+|+++++||+|||++++|++||+ +|++++|+||||+.||.+||+++||+++|||++||||.++|+.+|++ |+
T Consensus 428 ~-~~~~lG~i~l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~~PedK~~iV~~lQ~~-G~ 504 (673)
T PRK14010 428 E-DNEILGVIYLKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVIREEQAK-GH 504 (673)
T ss_pred E-CCEEEEEEEeecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCceEEcCCCHHHHHHHHHHHHhC-CC
Confidence 2 345699999999999999999999999 69999999999999999999999999999999999999999999998 99
Q ss_pred eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 660 GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCII 733 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~ 733 (750)
.|+|+|||+||||||++|||||||| +|||+|+|+||+||++|||+.|++++++||+++.|+++.+.|.++.|+
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~ 577 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDI 577 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccH
Confidence 9999999999999999999999999 599999999999999999999999999999999999999999997543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-93 Score=816.23 Aligned_cols=507 Identities=24% Similarity=0.338 Sum_probs=419.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccC
Q 004479 189 GLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPD-SVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVD 267 (750)
Q Consensus 189 ~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaD 267 (750)
.++++.+.++.++|.++++|+++.+++|.++.|+ +++|+|+++ ++++|++++|++||+|.|++||+||+|
T Consensus 70 ~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~---------~~~~V~~~eL~~GDiV~v~~Gd~IPaD 140 (679)
T PRK01122 70 LWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPG---------AAEEVPATELRKGDIVLVEAGEIIPAD 140 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCC---------EEEEEEHHHcCCCCEEEEcCCCEEEEE
Confidence 4455556678999999999999999999999886 699998762 389999999999999999999999999
Q ss_pred cEEEeceeeeeeccccCCcceEeeccCCc---cCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHH
Q 004479 268 CEVYQGTATITIEHLTGEVKPLEAKVGDR---IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDE 344 (750)
Q Consensus 268 g~vl~G~~~Vdes~LTGEs~pv~k~~g~~---v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~ 344 (750)
|+|++|.+.||||+|||||.|+.|++|+. ||+||.|.+|.+.++|+++|.+|.++||.+++++++.+|+|+|...+.
T Consensus 141 G~vieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~ 220 (679)
T PRK01122 141 GEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTI 220 (679)
T ss_pred EEEEEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHH
Confidence 99999999999999999999999999998 999999999999999999999999999999999999999999998888
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchH
Q 004479 345 FGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQV 423 (750)
Q Consensus 345 ~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~ 423 (750)
+..+++.+.++..+.+.. +.|+ .+. ..++..++++++++|||+|+.+ |.....++.+++|+|+++|++++
T Consensus 221 l~~~l~~i~l~~~~~~~~-----~~~~-~g~---~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~a 291 (679)
T PRK01122 221 LLAGLTIIFLLVVATLPP-----FAAY-SGG---ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRA 291 (679)
T ss_pred HHHhhhHHHHHHHHHHHH-----HHHH-hCc---hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchH
Confidence 877765543332222211 1121 121 1268889999999999999876 88888999999999999999999
Q ss_pred HHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcC
Q 004479 424 LDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIG 503 (750)
Q Consensus 424 lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~ 503 (750)
+|+||++|++|||||||||+|+|+++++++.++.+ +++++..++.++..+.||.++||++++.+
T Consensus 292 vE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~----------------~~~ll~~a~~~s~~s~hP~~~AIv~~a~~ 355 (679)
T PRK01122 292 VEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVT----------------EEELADAAQLSSLADETPEGRSIVVLAKQ 355 (679)
T ss_pred HHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCC----------------HHHHHHHHHHhcCCCCCchHHHHHHHHHh
Confidence 99999999999999999999999999998765532 66788889999999999999999998865
Q ss_pred C-CCCCc-----cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh--hHHHHHHHHh-cccCCCCc
Q 004479 504 K-DLPSV-----SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE--DESRKIKEAV-NGSSYGRG 574 (750)
Q Consensus 504 ~-~~~~~-----~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~--~~~~~~~~~~-~~~~~g~~ 574 (750)
. +.+.. ....+++.+.+|++++... + ..+.||+++.+.+.|... ...+++.+.. .....|.+
T Consensus 356 ~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~-------g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~ 426 (679)
T PRK01122 356 RFNLRERDLQSLHATFVPFSAQTRMSGVDLD-------G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGT 426 (679)
T ss_pred hcCCCchhhccccceeEeecCcCceEEEEEC-------C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCc
Confidence 2 32211 1223344445577765321 2 357899999998888431 1111222111 11234666
Q ss_pred EEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHH
Q 004479 575 FVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTS 654 (750)
Q Consensus 575 ~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~ 654 (750)
.++++. +...+|+++++|++|||++++|++||+ +|++++|+||||+.||.+||+++||+++|||++||||.++|+.+|
T Consensus 427 ~l~va~-~~~~lG~i~l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~~PedK~~iV~~lQ 504 (679)
T PRK01122 427 PLVVAE-DNRVLGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAGVDDFLAEATPEDKLALIRQEQ 504 (679)
T ss_pred EEEEEE-CCeEEEEEEEeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHHHHHH
Confidence 666653 345699999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS---C 731 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~---~ 731 (750)
++ |+.|+|+|||+||+|||++|||||||| +|||+|+|+||++|++|||++|++++++||++.-+--.--.|++. .
T Consensus 505 ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~ 582 (679)
T PRK01122 505 AE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVA 582 (679)
T ss_pred Hc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHH
Confidence 98 999999999999999999999999999 599999999999999999999999999999998333333455554 3
Q ss_pred HHHHHHHHHhh
Q 004479 732 IILASLPSVLG 742 (750)
Q Consensus 732 ~~~~~i~~~~G 742 (750)
+.++++|+.|.
T Consensus 583 ~~~~i~p~~~~ 593 (679)
T PRK01122 583 KYFAIIPAMFA 593 (679)
T ss_pred HHHHHHHHHHH
Confidence 44567776554
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-93 Score=848.72 Aligned_cols=533 Identities=20% Similarity=0.264 Sum_probs=441.1
Q ss_pred HHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcC
Q 004479 170 VLMAFAAFASIFMG-----------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVS 238 (750)
Q Consensus 170 ~L~~la~~~a~~~g-----------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~ 238 (750)
.++.++++.+++++ +|.+++++++++.++..++.++++|+++++++|.++.|.+++|+|+|..+ .
T Consensus 85 ~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~----~ 160 (903)
T PRK15122 85 YVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAG----A 160 (903)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccC----C
Confidence 44446666777764 46688888888889999999999999999999999999999999985100 0
Q ss_pred CCcEEEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc-----------------------C
Q 004479 239 DLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV-----------------------G 294 (750)
Q Consensus 239 ~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~-----------------------g 294 (750)
+|++++|+++||+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+ +
T Consensus 161 ~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (903)
T PRK15122 161 EPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLP 240 (903)
T ss_pred CCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCccccc
Confidence 1278999999999999999999999999999999986 899999999999999985 2
Q ss_pred CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 004479 295 DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIG 374 (750)
Q Consensus 295 ~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~ 374 (750)
+.+|+||.+.+|.++++|+++|.+|.+|||.+++++ ...++|+|+.++++++++..+.+.++.+++++..+ .
T Consensus 241 n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~------~- 312 (903)
T PRK15122 241 NICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF------T- 312 (903)
T ss_pred ceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------c-
Confidence 579999999999999999999999999999999988 55678999999999998877665555444332211 1
Q ss_pred cchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEe
Q 004479 375 TSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEP 453 (750)
Q Consensus 375 ~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~ 453 (750)
..++..++..++++++++|||+|+++ |++++.+..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++++
T Consensus 313 ~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~ 392 (903)
T PRK15122 313 KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD 392 (903)
T ss_pred cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc
Confidence 12456678899999999999999997 99999999999999999999999999999999999999999999999999875
Q ss_pred cCCcccccCCccccccCCCccHHHHHHHHHH---HhcCCCCchHHHHHhhhcCCCCC-----CccccceeeecCCeEEEE
Q 004479 454 IYGHWIRSKKTHDISCCIPNCEKEALAVAAA---MEKGTTHPIGRAVVDHSIGKDLP-----SVSIDRFEYFPGRGLTAT 525 (750)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~---~e~~s~hP~~~Ai~~~~~~~~~~-----~~~~~~~~~~~g~g~~~~ 525 (750)
.++.. +++++.+++. .+..+.||+++|+++++...+.. ...+.++.+.+.++.+++
T Consensus 393 ~~~~~----------------~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~ 456 (903)
T PRK15122 393 VSGRK----------------DERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSV 456 (903)
T ss_pred CCCCC----------------hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEE
Confidence 44321 3455665542 23456799999999998654321 223445556666777766
Q ss_pred EeCeeeccCCCceeeeccCchHHHhhhccChh-----------HHHHHHHHh-cccCCCCcEEEEeec------------
Q 004479 526 VNGIESGTEGGKELKASLGSVDFITSLCKSED-----------ESRKIKEAV-NGSSYGRGFVHAALS------------ 581 (750)
Q Consensus 526 v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~-----------~~~~~~~~~-~~~~~g~~~~~~~~~------------ 581 (750)
+... .+++++.+.||++|.++++|.... ..+++.+.. .....|.+++.++..
T Consensus 457 v~~~----~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~ 532 (903)
T PRK15122 457 VVED----AQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYS 532 (903)
T ss_pred EEEc----CCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccc
Confidence 6432 145678899999999999986421 111222221 123456666665531
Q ss_pred --cC---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------
Q 004479 582 --VN---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--------------------- 635 (750)
Q Consensus 582 --~~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--------------------- 635 (750)
.+ ..+|+++++||+|||++++|++||+ +|++++|+||||+.||.+||+++||.
T Consensus 533 ~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~ 611 (903)
T PRK15122 533 TADERDLVIRGFLTFLDPPKESAAPAIAALRE-NGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALARE 611 (903)
T ss_pred cccccCcEEEEEEeccCccHHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHH
Confidence 11 3499999999999999999999999 79999999999999999999999997
Q ss_pred ----eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHH
Q 004479 636 ----EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 636 ----~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i 711 (750)
+||||++|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|||+|+++||+||++|||+.|++++
T Consensus 612 v~~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 612 VEERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred hhhCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 799999999999999999998 999999999999999999999999999 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 712 AKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 712 ~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
++||++++||++++.|.++.|+..++
T Consensus 690 ~~gR~i~~nI~k~i~~~ls~n~~~~~ 715 (903)
T PRK15122 690 IKGRETFGNIIKYLNMTASSNFGNVF 715 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999988765433
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-91 Score=844.62 Aligned_cols=553 Identities=20% Similarity=0.276 Sum_probs=440.3
Q ss_pred HHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCceEEEEcCCCCC
Q 004479 169 HVLMAFAAFASIFMG-------------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKEN-YPDSVLVLNVDDDNL 234 (750)
Q Consensus 169 ~~L~~la~~~a~~~g-------------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~-~p~~~~v~r~~~~~~ 234 (750)
..++.++++.+++++ .|.+++++++++.+...+..+.+.++++.+++|.+. .+.+++|+|+|
T Consensus 99 ~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG---- 174 (941)
T TIGR01517 99 LILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGG---- 174 (941)
T ss_pred HHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECC----
Confidence 445556777777776 678887776666555566666777777777777653 46789999987
Q ss_pred CCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEec-eeeeeeccccCCcceEeeccCCc--cCCCceecceeEEEE
Q 004479 235 PDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQG-TATITIEHLTGEVKPLEAKVGDR--IPGGARNLDGRMILK 311 (750)
Q Consensus 235 ~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G-~~~Vdes~LTGEs~pv~k~~g~~--v~aGt~~~~G~~~v~ 311 (750)
++++|+++||+|||+|.|++||+|||||+|++| ++.||||+|||||.|+.|.+|+. +|+||.+.+|.++++
T Consensus 175 ------~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~i 248 (941)
T TIGR01517 175 ------QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRML 248 (941)
T ss_pred ------EEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEE
Confidence 899999999999999999999999999999999 78999999999999999999887 999999999999999
Q ss_pred EEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcc--cc-------cchhhhHH
Q 004479 312 ATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSF--IG-------TSVCRGSV 382 (750)
Q Consensus 312 v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~--~~-------~~~~~~~~ 382 (750)
|+++|.+|.+|||.+++++++ .++|+|+.++++++++.+++++++++++++..+.+.+.. .. ...+...+
T Consensus 249 V~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHF 327 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHH
Confidence 999999999999999998876 568999999999999999888877766554422111110 00 01345678
Q ss_pred HHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCccccc
Q 004479 383 YRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRS 461 (750)
Q Consensus 383 ~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~ 461 (750)
.+++++++++|||+|+++ |++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|++++...+. +..
T Consensus 328 ~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~-~~~ 406 (941)
T TIGR01517 328 IIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQR-FNV 406 (941)
T ss_pred HHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecce-Eec
Confidence 899999999999999997 999999999999999999999999999999999999999999999999998754321 111
Q ss_pred CCccccccCCCccHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCCC-------ccccceeeecCCe
Q 004479 462 KKTHDISCCIPNCEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLPS-------VSIDRFEYFPGRG 521 (750)
Q Consensus 462 ~~~~~~~~~~~~~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~~-------~~~~~~~~~~g~g 521 (750)
.+... ..+....+++..++.+.. ...+|++.|+++++...+.+. ..+..+++.+.++
T Consensus 407 ~~~~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k 483 (941)
T TIGR01517 407 RDVLR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERK 483 (941)
T ss_pred Ccccc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCC
Confidence 11000 000011223332222221 135688899999886433221 1234456666666
Q ss_pred EEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeecc-------
Q 004479 522 LTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALSV------- 582 (750)
Q Consensus 522 ~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~~------- 582 (750)
.++++... ++++++.++||+||.+.++|... +..+.+.+.. .....|.+++.++...
T Consensus 484 ~msvv~~~----~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~ 559 (941)
T TIGR01517 484 FMSVVVKH----SGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP 559 (941)
T ss_pred eEEEEEEe----CCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 66665432 24568899999999999998642 0112222221 1234465555544311
Q ss_pred -----C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------
Q 004479 583 -----N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------------------- 635 (750)
Q Consensus 583 -----~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------------------- 635 (750)
+ ..+|+++++||+||+++++|++||+ +|++++|+||||+.||.++|++|||.
T Consensus 560 ~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~e 638 (941)
T TIGR01517 560 RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEE 638 (941)
T ss_pred cccccccCcEEEEEeeccCCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHH
Confidence 1 3489999999999999999999999 79999999999999999999999996
Q ss_pred --------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCH
Q 004479 636 --------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 636 --------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l 707 (750)
.||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||..|+|+|+++||++|++|+|+.|
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I 717 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASI 717 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHH
Confidence 699999999999999999998 99999999999999999999999999966999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 004479 708 PFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742 (750)
Q Consensus 708 ~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G 742 (750)
++++++||+++++|+||+.|++++|+..+++.++|
T Consensus 718 ~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~ 752 (941)
T TIGR01517 718 VRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVG 752 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998776665544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-91 Score=797.66 Aligned_cols=514 Identities=44% Similarity=0.668 Sum_probs=466.6
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEec
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPV 247 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~ 247 (750)
||+|+++++++++++|+|+++.++++++.++.+++.|.++|+++.+++|.++.|.+++|+|+| +++++++
T Consensus 1 ~~~l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g----------~~~~i~~ 70 (536)
T TIGR01512 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGG----------SLEEVAV 70 (536)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECC----------EEEEEEH
Confidence 589999999999999999999999999999999999999999999999999999999999987 7899999
Q ss_pred CCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 248 HDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 248 ~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|||.++
T Consensus 71 ~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~ 150 (536)
T TIGR01512 71 EELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNL 150 (536)
T ss_pred HHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.++++++++++++++++++++++. .+... +..++.+++++++++|||+|+++ |+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~ 222 (536)
T TIGR01512 151 VEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVP------GLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLS 222 (536)
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHH
Confidence 9999999999999999999999999888877664432 22111 12378899999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHh
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e 486 (750)
++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++.+ .+++.+++++|
T Consensus 223 ~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~----------------------~~~l~~a~~~e 280 (536)
T TIGR01512 223 AISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP----------------------AEVLRLAAAAE 280 (536)
T ss_pred HHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH----------------------HHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998853 36788999999
Q ss_pred cCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHh
Q 004479 487 KGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAV 566 (750)
Q Consensus 487 ~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~ 566 (750)
+.+.||+++||++++.+.+ ...++++.+++|+.+.++|.+ +..|+++++.+....
T Consensus 281 ~~~~hp~~~Ai~~~~~~~~----~~~~~~~~~g~gi~~~~~g~~----------~~ig~~~~~~~~~~~----------- 335 (536)
T TIGR01512 281 QASSHPLARAIVDYARKRE----NVESVEEVPGEGVRAVVDGGE----------VRIGNPRSLEAAVGA----------- 335 (536)
T ss_pred ccCCCcHHHHHHHHHHhcC----CCcceEEecCCeEEEEECCeE----------EEEcCHHHHhhcCCc-----------
Confidence 9999999999999987654 456788899999999887642 457888877543211
Q ss_pred cccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCc-EEEEecCCCHHHHHHHHHHcCCceEEecCCHhh
Q 004479 567 NGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARL-RVMMLTGDHESSAQRVANAVGINEVYCSLKPED 645 (750)
Q Consensus 567 ~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi-~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~ 645 (750)
.....+.+.++++. ++...|.+.++|++||+++++|++|++ .|+ +++|+|||++.+++++++++||+++|+++.|++
T Consensus 336 ~~~~~~~~~~~v~~-~~~~~g~i~~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~~ 413 (536)
T TIGR01512 336 RPESAGKTIVHVAR-DGTYLGYILLSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPED 413 (536)
T ss_pred chhhCCCeEEEEEE-CCEEEEEEEEeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcHH
Confidence 01123445555543 345699999999999999999999999 699 999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 004479 646 KLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNV 725 (750)
Q Consensus 646 K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni 725 (750)
|.++++.++++ ++.|+|+|||.||+||+++||+||++|..+++.++++||++++++++..+++++++||+++++++||+
T Consensus 414 K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 414 KLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 89999999999999999999999999955799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccc
Q 004479 726 ALALSCIILASLPSVLGFLPLWLT 749 (750)
Q Consensus 726 ~~al~~~~~~~i~~~~G~l~~~~a 749 (750)
.|+++||++++.++++|++|||+|
T Consensus 493 ~~a~~~n~~~i~~a~~G~~~p~~a 516 (536)
T TIGR01512 493 VIALGIILLLILLALFGVLPLWLA 516 (536)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHH
Confidence 999999999888899999999987
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-90 Score=794.33 Aligned_cols=533 Identities=40% Similarity=0.610 Sum_probs=472.1
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEec
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPV 247 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~ 247 (750)
||+|++++++.+|++|.|.++.++++++.++.+++.+.++|+++.+++|.++.|.+++++|+++ ++++|+.
T Consensus 1 ~d~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g---------~~~~i~~ 71 (556)
T TIGR01525 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDG---------SEEEVPV 71 (556)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCC---------eEEEEEH
Confidence 6899999999999999999999999999999999999999999999999999999999999853 7899999
Q ss_pred CCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 248 HDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 248 ~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|++|+|.++
T Consensus 72 ~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 72 EELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred HHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.+++++++|++++++++++++++. .+.... ..+.+++++++++|||+|+++ |+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~------~~~~~~---~~~~~~~~vlv~~~P~al~l~~~~~~~~ 222 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVW------LALGAL---GALYRALAVLVVACPCALGLATPVAILV 222 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhccc---hHHHHHHHHHhhccccchhehhHHHHHH
Confidence 9999999999999999999999999888888775432 222111 578999999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHh
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e 486 (750)
++.+++++||++|+++++|+|+++|++|||||||||+|+|+|.++.+.++.. ..+++++.+++++|
T Consensus 223 ~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------~~~~~~l~~a~~~e 288 (556)
T TIGR01525 223 AIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------ISEEELLALAAALE 288 (556)
T ss_pred HHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------ccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997654321 01567888999999
Q ss_pred cCCCCchHHHHHhhhcCCCCCCcccc-ceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHH-HHHHH
Q 004479 487 KGTTHPIGRAVVDHSIGKDLPSVSID-RFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDES-RKIKE 564 (750)
Q Consensus 487 ~~s~hP~~~Ai~~~~~~~~~~~~~~~-~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~-~~~~~ 564 (750)
+.+.||+++||++++++.+.+... . ++++.+++|+.+.++|. ..+.+|+++++...-...+.. ....
T Consensus 289 ~~~~hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~~~gi~~~~~g~---------~~~~lg~~~~~~~~~~~~~~~~~~~~- 357 (556)
T TIGR01525 289 QSSSHPLARAIVRYAKKRGLELPK-QEDVEEVPGKGVEATVDGQ---------EEVRIGNPRLLELAAEPISASPDLLN- 357 (556)
T ss_pred ccCCChHHHHHHHHHHhcCCCccc-ccCeeEecCCeEEEEECCe---------eEEEEecHHHHhhcCCCchhhHHHHH-
Confidence 999999999999999766544322 3 67888999999988762 125678888872111111111 1111
Q ss_pred HhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCC-cEEEEecCCCHHHHHHHHHHcCCceEEecCCH
Q 004479 565 AVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHAR-LRVMMLTGDHESSAQRVANAVGINEVYCSLKP 643 (750)
Q Consensus 565 ~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~ag-i~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P 643 (750)
.....|.+.++++. ++..+|.+.++|++||+++++|++|++ .| ++++|+|||+..++.++++++||+++|+++.|
T Consensus 358 --~~~~~g~~~~~v~~-~~~~~g~i~~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p 433 (556)
T TIGR01525 358 --EGESQGKTVVFVAV-DGELLGVIALRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP 433 (556)
T ss_pred --HHhhCCcEEEEEEE-CCEEEEEEEecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH
Confidence 11234566666654 345699999999999999999999999 58 99999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 004479 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQ 723 (750)
Q Consensus 644 ~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ 723 (750)
++|.++++.+++. ++.|+|+|||.||+||+++||||+++|. +++.+++.||+++.+++++.+++++++||+++++|+|
T Consensus 434 ~~K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 8899999999999999999999999994 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc-cc
Q 004479 724 NVALALSCIILASLPSVLGFLPLW-LT 749 (750)
Q Consensus 724 ni~~al~~~~~~~i~~~~G~l~~~-~a 749 (750)
|+.|+++||++.++++++|++||| +|
T Consensus 512 nl~~a~~~N~~~i~~a~~g~~~p~~~a 538 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAGGLLPLWLLA 538 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 999999999998888899999997 54
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-91 Score=773.11 Aligned_cols=566 Identities=23% Similarity=0.271 Sum_probs=456.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
-.++.++++.||.+.+|.|+..|.+++.+...+..++++|+.+++++|+++.|+.++|+|+| +.+.+++.
T Consensus 62 i~iLL~sA~ISfvl~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~g----------k~~~i~A~ 131 (972)
T KOG0202|consen 62 ILILLLSAAISFVLADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSG----------KLQHILAR 131 (972)
T ss_pred HHHHHHHHHHHHHHHhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecC----------cccceehh
Confidence 56667889999999999999887777777667777889999999999999999999999988 78999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccC--------------CccCCCceecceeEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVG--------------DRIPGGARNLDGRMILKAT 313 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g--------------~~v~aGt~~~~G~~~v~v~ 313 (750)
||+|||+|.++-||+||||.++++-.. .+|||+|||||.|+.|... +.+|+||.+..|.++..|+
T Consensus 132 eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi 211 (972)
T KOG0202|consen 132 ELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVI 211 (972)
T ss_pred ccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEE
Confidence 999999999999999999999998876 8999999999999999532 2379999999999999999
Q ss_pred EeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc---chhhhHHHHHHHHHH
Q 004479 314 KTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT---SVCRGSVYRALGLMV 390 (750)
Q Consensus 314 ~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~---~~~~~~~~~al~vlv 390 (750)
.||.+|.+|+|.+.+++.+..|+|+|+.+|+|+++++.++.++.+.+.++..-+|.++..+. ..+...|..++++.|
T Consensus 212 ~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAV 291 (972)
T KOG0202|consen 212 GTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAV 291 (972)
T ss_pred eccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998777777776665222233333222 234566788999999
Q ss_pred hhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCC------
Q 004479 391 AASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKK------ 463 (750)
Q Consensus 391 ~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~------ 463 (750)
+++|++||++ +++++.|..||+|++++||...++|+||.+++||+|||||||+|+|.+++++..++.......
T Consensus 292 AAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ 371 (972)
T KOG0202|consen 292 AAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGT 371 (972)
T ss_pred HhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCc
Confidence 9999999986 999999999999999999999999999999999999999999999999999876543322210
Q ss_pred -cc-------cc-----ccCCCccHHHHHHHHHHH-----hcC-------CCCchHHHHHhhhcCCCCCCc---------
Q 004479 464 -TH-------DI-----SCCIPNCEKEALAVAAAM-----EKG-------TTHPIGRAVVDHSIGKDLPSV--------- 509 (750)
Q Consensus 464 -~~-------~~-----~~~~~~~~~~~l~~~a~~-----e~~-------s~hP~~~Ai~~~~~~~~~~~~--------- 509 (750)
++ +. .+....+-.+++..++-+ ++. -..|.+-|+...+.+-+++..
T Consensus 372 ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~ 451 (972)
T KOG0202|consen 372 TYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE 451 (972)
T ss_pred eeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc
Confidence 00 00 000111112233333222 211 346999999887754433221
Q ss_pred -------------cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-------------hHHHHHH
Q 004479 510 -------------SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-------------DESRKIK 563 (750)
Q Consensus 510 -------------~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-------------~~~~~~~ 563 (750)
.+.+++|.+.|+.|+++-.... ++..+..|.||++|.++++|+.. ...+.+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~--~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAH--GQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCC--CCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 2356788888998888754332 23446778999999999999542 1122222
Q ss_pred HHh-cccCCCCcEEEEeec-----------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecC
Q 004479 564 EAV-NGSSYGRGFVHAALS-----------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTG 619 (750)
Q Consensus 564 ~~~-~~~~~g~~~~~~~~~-----------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTG 619 (750)
+.. +....|.++...+.. +-.++|++++.||+|++++++|+.|++ +||+|+|+||
T Consensus 530 ~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~-aGIrV~mITG 608 (972)
T KOG0202|consen 530 ANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQ-AGIRVIMITG 608 (972)
T ss_pred HHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHH-cCCEEEEEcC
Confidence 222 223344444433322 112389999999999999999999999 8999999999
Q ss_pred CCHHHHHHHHHHcCCc-------------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCc
Q 004479 620 DHESSAQRVANAVGIN-------------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGI 668 (750)
Q Consensus 620 D~~~tA~~iA~~~GI~-------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~ 668 (750)
||++||.+||+++||. .+|+|++|++|.++|+.||++ |+.|||+|||+
T Consensus 609 D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGV 687 (972)
T KOG0202|consen 609 DNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGV 687 (972)
T ss_pred CCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCc
Confidence 9999999999999995 299999999999999999998 99999999999
Q ss_pred cCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcc
Q 004479 669 NDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLP----SVLGFL 744 (750)
Q Consensus 669 NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~----~~~G~l 744 (750)
|||||||.||||||||.+|||+|+++||+||.||||++|..++++||.+|+||||++.|.++.|+...+. +++|+-
T Consensus 688 NDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p 767 (972)
T KOG0202|consen 688 NDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIP 767 (972)
T ss_pred cchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999889999999999999999999999999999999999999999999988766544 455654
Q ss_pred cccc
Q 004479 745 PLWL 748 (750)
Q Consensus 745 ~~~~ 748 (750)
.|..
T Consensus 768 ~pL~ 771 (972)
T KOG0202|consen 768 EPLI 771 (972)
T ss_pred Cccc
Confidence 4443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-90 Score=828.07 Aligned_cols=548 Identities=21% Similarity=0.284 Sum_probs=449.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++|+|.+++.+++++.+...+..+.++|+++.+++|.++.|.+++|+|+| ++++|+++
T Consensus 64 ~~~L~~aa~ls~~~g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg----------~~~~I~~~ 133 (884)
T TIGR01522 64 ILLLIASAVISVFMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREG----------KLEHVLAS 133 (884)
T ss_pred HHHHHHHHHHHHHHcchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC----------EEEEEEHH
Confidence 55566788889999999999887766666666777788899999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccCC--------------ccCCCceecceeEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGD--------------RIPGGARNLDGRMILKAT 313 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~--------------~v~aGt~~~~G~~~v~v~ 313 (750)
||+|||+|.+++||+|||||+|++|+ ..||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|+
T Consensus 134 eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~ 213 (884)
T TIGR01522 134 TLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVV 213 (884)
T ss_pred HCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEE
Confidence 99999999999999999999999996 799999999999999999874 699999999999999999
Q ss_pred EeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhh
Q 004479 314 KTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAAS 393 (750)
Q Consensus 314 ~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~ 393 (750)
++|.+|.+|+|.+++++++..++|+|+.++++++++.+++++++++++++. |. . ..++...+..++++++++|
T Consensus 214 ~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~~~v~llv~ai 286 (884)
T TIGR01522 214 GTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG-----WF-Q-GKDWLEMFTISVSLAVAAI 286 (884)
T ss_pred EecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-h-cCCHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999887665554443332 21 1 1245678899999999999
Q ss_pred hhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccC--Ccc-----
Q 004479 394 PCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSK--KTH----- 465 (750)
Q Consensus 394 P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~--~~~----- 465 (750)
||+|+++ |++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..++...... ...
T Consensus 287 P~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~ 366 (884)
T TIGR01522 287 PEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEV 366 (884)
T ss_pred cchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcc
Confidence 9999997 99999999999999999999999999999999999999999999999999986543211000 000
Q ss_pred --cc---ccCCCccHHHHHHHHHHHhcC---------CCCchHHHHHhhhcCCCCC-----CccccceeeecCCeEEEEE
Q 004479 466 --DI---SCCIPNCEKEALAVAAAMEKG---------TTHPIGRAVVDHSIGKDLP-----SVSIDRFEYFPGRGLTATV 526 (750)
Q Consensus 466 --~~---~~~~~~~~~~~l~~~a~~e~~---------s~hP~~~Ai~~~~~~~~~~-----~~~~~~~~~~~g~g~~~~v 526 (750)
+. ....+....+++..++.+... ..||+++|+++++.+.+.+ ...+..+++.+.+++++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~ 446 (884)
T TIGR01522 367 IVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVK 446 (884)
T ss_pred cccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEE
Confidence 00 000000123445444433321 1359999999998654432 2234566667777777765
Q ss_pred eCeeeccCCCceeeeccCchHHHhhhccChh------------HHHHHHHHh-cccCCCCcEEEEeeccC----ceEEEE
Q 004479 527 NGIESGTEGGKELKASLGSVDFITSLCKSED------------ESRKIKEAV-NGSSYGRGFVHAALSVN----EKVTLI 589 (750)
Q Consensus 527 ~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~------------~~~~~~~~~-~~~~~g~~~~~~~~~~~----~~lG~i 589 (750)
.... .+++++.+.||+||.++..|.... ..+++.+.. .....|.+++.++.... ..+|++
T Consensus 447 ~~~~---~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli 523 (884)
T TIGR01522 447 CVHR---QDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLV 523 (884)
T ss_pred EEEc---CCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEE
Confidence 4321 245678899999999999986421 112222221 12345667666654321 359999
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------------eEEecCC
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN---------------------------EVYCSLK 642 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~---------------------------~v~a~~~ 642 (750)
+++||+|||++++|++||+ +|++++|+|||++.||.++|+++||. .||||++
T Consensus 524 ~l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~ 602 (884)
T TIGR01522 524 GINDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS 602 (884)
T ss_pred eccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC
Confidence 9999999999999999999 79999999999999999999999997 5999999
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHH
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVK 722 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~ 722 (750)
|+||.++|+.+|++ |++|+|||||+||+|||++|||||+||..|+|+|+++||++|++|||+.+++++++||+++++|+
T Consensus 603 P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~ 681 (884)
T TIGR01522 603 PEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIK 681 (884)
T ss_pred HHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 99999999999999999999999999966999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 004479 723 QNVALALSCIILASLP 738 (750)
Q Consensus 723 ~ni~~al~~~~~~~i~ 738 (750)
+|+.|.++.|+..+++
T Consensus 682 k~i~~~l~~ni~~~~~ 697 (884)
T TIGR01522 682 NFITFQLSTSVAALSL 697 (884)
T ss_pred HHHHHHhhhhHHHHHH
Confidence 9999999998776644
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-92 Score=776.16 Aligned_cols=616 Identities=19% Similarity=0.245 Sum_probs=480.7
Q ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH---HHHHhccccCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHC
Q 004479 87 KAVIKFAKATRWLDLANFLREHLQLCCCAAALF---LAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAG 163 (750)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~ 163 (750)
+++..+-..+|.+++.+.++++...++.+-+-- --..+..+.+|.+..+.+ |.|+++|++++.
T Consensus 92 ~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F-------------l~fvweA~qD~T- 157 (1034)
T KOG0204|consen 92 HDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF-------------LRFVWEALQDVT- 157 (1034)
T ss_pred cchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH-------------HHHHHHHhccch-
Confidence 334444455899999999998877766542221 122466777665555543 567888888764
Q ss_pred CCCChHHHHHHHHHHHHHHhh--------hHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCC
Q 004479 164 GKVNIHVLMAFAAFASIFMGN--------SLEGGLLLAMF---NLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDD 232 (750)
Q Consensus 164 ~~~~~~~L~~la~~~a~~~g~--------~~~~~~i~~~~---~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~ 232 (750)
-+++.+|++.++.+|. |++|+.|++.+ .+..++.+|.++++.+.+++.+ ...+..|+|+|
T Consensus 158 -----LiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k--~~~k~~ViR~G-- 228 (1034)
T KOG0204|consen 158 -----LIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEK--RNIKFQVIRGG-- 228 (1034)
T ss_pred -----HHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhh--hceEEEEEECC--
Confidence 4555688888888874 66776655433 2457789999999988888443 45678899987
Q ss_pred CCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc--CCccCCCceecceeEE
Q 004479 233 NLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV--GDRIPGGARNLDGRMI 309 (750)
Q Consensus 233 ~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~--g~~v~aGt~~~~G~~~ 309 (750)
+.++|++.||+|||++.++.||.|||||++++|+. .+|||+|||||.++.|.+ ++++++||.+++|+++
T Consensus 229 --------~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgk 300 (1034)
T KOG0204|consen 229 --------RRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGK 300 (1034)
T ss_pred --------EEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcce
Confidence 89999999999999999999999999999999965 999999999999999987 5689999999999999
Q ss_pred EEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccc--c------c-----c
Q 004479 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFI--G------T-----S 376 (750)
Q Consensus 310 v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~--~------~-----~ 376 (750)
+.||.+|.+|..|+++.++.+...+++|+|-.+++++..+..+.+.+|++++++....+..... + . .
T Consensus 301 MlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~ 380 (1034)
T KOG0204|consen 301 MLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQ 380 (1034)
T ss_pred EEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHH
Confidence 9999999999999999999999989999999999999999999999888887664333221100 0 0 1
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecC
Q 004479 377 VCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIY 455 (750)
Q Consensus 377 ~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~ 455 (750)
.+...|..+++++|+|+|++||+| ++++++++++|.+.+.|+|..++||+||++++||.|||||||+|+|+|.+.+...
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~ 460 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGS 460 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecc
Confidence 233456677889999999999998 9999999999999999999999999999999999999999999999999987643
Q ss_pred CcccccCCccccccCCCccHHHHHHHHHHH---------------hcCCCCchHHHHHhhhcCCCCCCcc-------ccc
Q 004479 456 GHWIRSKKTHDISCCIPNCEKEALAVAAAM---------------EKGTTHPIGRAVVDHSIGKDLPSVS-------IDR 513 (750)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~---------------e~~s~hP~~~Ai~~~~~~~~~~~~~-------~~~ 513 (750)
.+...... .. .. .+..-.+++-..-+. .+.+.+|.++||+.+....+.+... ..-
T Consensus 461 ~~~k~~~~-~~-~~-l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv 537 (1034)
T KOG0204|consen 461 EHYKVNSP-KS-SN-LPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKV 537 (1034)
T ss_pred ccccccCc-cc-cc-CCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEE
Confidence 32211111 10 01 111122222222221 2335689999999988554432221 223
Q ss_pred eeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh------------hHHHHHHHHhc-ccCCCCcEEEEee
Q 004479 514 FEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE------------DESRKIKEAVN-GSSYGRGFVHAAL 580 (750)
Q Consensus 514 ~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~------------~~~~~~~~~~~-~~~~g~~~~~~~~ 580 (750)
+.|.+.|+.++++-... ++..+.|+||++|.++..|... +....+++.++ ....+.+.++++.
T Consensus 538 ~~FNS~kK~~gvvi~~~----~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy 613 (1034)
T KOG0204|consen 538 YPFNSVKKRMGVVIKLP----DGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAY 613 (1034)
T ss_pred eccCcccceeeEEEEcC----CCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEe
Confidence 45556666666654322 3331389999999999999752 11122222221 1233444444443
Q ss_pred cc------C------------c--eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-----
Q 004479 581 SV------N------------E--KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----- 635 (750)
Q Consensus 581 ~~------~------------~--~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----- 635 (750)
.+ + + .+|+++++||+|||++++|+.|++ ||++|.|+||||..||++||.+|||.
T Consensus 614 ~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~-AGItVRMVTGDNI~TAkAIA~eCGILt~~~d 692 (1034)
T KOG0204|consen 614 RDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR-AGITVRMVTGDNINTAKAIARECGILTPGGD 692 (1034)
T ss_pred eccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH-cCcEEEEEeCCcHHHHHHHHHHcccccCCCc
Confidence 11 1 0 189999999999999999999998 89999999999999999999999995
Q ss_pred ------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHH
Q 004479 636 ------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATA 691 (750)
Q Consensus 636 ------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A 691 (750)
+|+||.+|.||.-+|+.|+++ |++||.+|||+||+|||++||||+|||..||++|
T Consensus 693 ~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 693 FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 399999999999999999988 9999999999999999999999999999999999
Q ss_pred HhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 004479 692 IAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742 (750)
Q Consensus 692 ~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G 742 (750)
+|+|||||+||||++|+++++|||..|.+|+++++|.++.|+.+.+..+.|
T Consensus 772 KEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~ 822 (1034)
T KOG0204|consen 772 KEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVS 822 (1034)
T ss_pred hhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhh
Confidence 999999999999999999999999999999999999999998877766655
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-89 Score=779.17 Aligned_cols=505 Identities=23% Similarity=0.329 Sum_probs=415.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 191 LLAMFNLAHIAEEFFTSRAMVDVKELKENYPDS-VLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 191 i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~-~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++.+.++.++|.+.++|+++.+++|.++.|++ ++|+|+++ ++++|++++|++||+|.|++||+||+||+
T Consensus 73 l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg---------~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~ 143 (675)
T TIGR01497 73 LFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDG---------AIDKVPADQLKKGDIVLVEAGDVIPCDGE 143 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCC---------EEEEEEHHHCCCCCEEEECCCCEEeeeEE
Confidence 344456789999999999999999999998874 88886332 78999999999999999999999999999
Q ss_pred EEeceeeeeeccccCCcceEeeccCCc---cCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 004479 270 VYQGTATITIEHLTGEVKPLEAKVGDR---IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346 (750)
Q Consensus 270 vl~G~~~Vdes~LTGEs~pv~k~~g~~---v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a 346 (750)
|++|++.||||+|||||.||.|++|+. ||+||.|.+|.+.++|+++|.+|.++||.+++++++.+|+|+|...+.+.
T Consensus 144 vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~ 223 (675)
T TIGR01497 144 VIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILL 223 (675)
T ss_pred EEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 999999999999999999999999985 99999999999999999999999999999999999999999998888776
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHH
Q 004479 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLD 425 (750)
Q Consensus 347 ~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE 425 (750)
.++..+.++..+ ++ +. |..+.. ...++..++++++++|||+|+.. |.....++.+++|+|+++|+++++|
T Consensus 224 ~~l~~v~li~~~---~~---~~-~~~~~~--~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE 294 (675)
T TIGR01497 224 IALTLVFLLVTA---TL---WP-FAAYGG--NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVE 294 (675)
T ss_pred HHHHHHHHHHHH---HH---HH-HHHhcC--hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHH
Confidence 554433222211 11 11 111111 12257778999999999999765 6666789999999999999999999
Q ss_pred hhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCC
Q 004479 426 ALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKD 505 (750)
Q Consensus 426 ~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~ 505 (750)
+||++|++|||||||||+|+|+++++++.++.+ .++++.+++.++..++||.++|+++++.+.+
T Consensus 295 ~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~----------------~~~ll~~aa~~~~~s~hP~a~Aiv~~a~~~~ 358 (675)
T TIGR01497 295 ACGDVDTLLLDKTGTITLGNRLASEFIPAQGVD----------------EKTLADAAQLASLADDTPEGKSIVILAKQLG 358 (675)
T ss_pred HhhCCCEEEECCCCcccCCCeEEEEEEecCCCc----------------HHHHHHHHHHhcCCCCCcHHHHHHHHHHHcC
Confidence 999999999999999999999999998754432 6778899999999999999999999886554
Q ss_pred CCCc----cccceeeecCC-eEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh--HHHHHHHHh-cccCCCCcEEE
Q 004479 506 LPSV----SIDRFEYFPGR-GLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED--ESRKIKEAV-NGSSYGRGFVH 577 (750)
Q Consensus 506 ~~~~----~~~~~~~~~g~-g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~--~~~~~~~~~-~~~~~g~~~~~ 577 (750)
.... ...++..++++ |++++... ++ ..+.||+++.+.+.|.... ....+.+.. .....|.+.++
T Consensus 359 ~~~~~~~~~~~~~~pf~~~~~~sg~~~~------~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 359 IREDDVQSLHATFVEFTAQTRMSGINLD------NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred CCccccccccceEEEEcCCCcEEEEEEe------CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEE
Confidence 3221 12234444444 67665321 12 3578999999987664211 011111111 11234666666
Q ss_pred EeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhc
Q 004479 578 AALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM 657 (750)
Q Consensus 578 ~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~ 657 (750)
++. ++..+|+++++|++|||++++|++||+ +|++++|+||||+.+|.++|+++||+++|||++|+||.++|+.+|++
T Consensus 431 va~-~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~- 507 (675)
T TIGR01497 431 VCE-DNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALIRQEQAE- 507 (675)
T ss_pred EEE-CCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHc-
Confidence 654 346799999999999999999999999 69999999999999999999999999999999999999999999998
Q ss_pred CCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 004479 658 GGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS---CIIL 734 (750)
Q Consensus 658 g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~---~~~~ 734 (750)
|+.|+|+|||+||+|||++||||||||. |+++|+++||++|++|||++|++++++||+++-+...-..|+++ .+.+
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm~~-gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeCC-CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 9999999999999999999999999995 89999999999999999999999999999999888877777775 3445
Q ss_pred HHHHHHh
Q 004479 735 ASLPSVL 741 (750)
Q Consensus 735 ~~i~~~~ 741 (750)
+++|+.|
T Consensus 587 ~~~~~~~ 593 (675)
T TIGR01497 587 AIIPAIF 593 (675)
T ss_pred HHHHHHH
Confidence 6677544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-88 Score=808.93 Aligned_cols=543 Identities=27% Similarity=0.353 Sum_probs=443.3
Q ss_pred HHHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEE
Q 004479 169 HVLMAFAAFASIFMGNSL----EGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRS 244 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~----~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~ 244 (750)
..++.+++..+++.+.|. ++..+.+++.+...+..+++.|+.+.+++|++..+.+++|+|+| ++++
T Consensus 83 ~~iL~~~a~~s~~~~~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g----------~~~~ 152 (917)
T COG0474 83 IILLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDG----------KFVE 152 (917)
T ss_pred HHHHHHHHHHHHHhhcccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCC----------cEEE
Confidence 455567778888888873 44466666666667777888888888999999899999999977 8999
Q ss_pred EecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc--------------CCccCCCceecceeEE
Q 004479 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV--------------GDRIPGGARNLDGRMI 309 (750)
Q Consensus 245 V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~--------------g~~v~aGt~~~~G~~~ 309 (750)
|+++||+|||+|.+++||+||||++|+++++ .||||+|||||.|++|.+ .+.+|+||.+.+|.+.
T Consensus 153 i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~ 232 (917)
T COG0474 153 IPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAK 232 (917)
T ss_pred ecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEE
Confidence 9999999999999999999999999999998 999999999999999974 3567999999999999
Q ss_pred EEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHH
Q 004479 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLM 389 (750)
Q Consensus 310 v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vl 389 (750)
+.|++||.+|..|++..++......++|+|+.+++++.++..+.++++++++++..+ .+...+...+.++++++
T Consensus 233 giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~v~l~ 306 (917)
T COG0474 233 GIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF------RGGNGLLESFLTALALA 306 (917)
T ss_pred EEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCccHHHHHHHHHHHH
Confidence 999999999999999999999877789999999999999999988888887665521 11112567899999999
Q ss_pred HhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecC-CcccccCCcccc
Q 004479 390 VAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIY-GHWIRSKKTHDI 467 (750)
Q Consensus 390 v~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~-~~~~~~~~~~~~ 467 (750)
+.++|++|++. .++++.+..+|+++++++|+++++|+||++|+||+|||||||+|+|+|.+++..+ +.... . .
T Consensus 307 va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~----~ 381 (917)
T COG0474 307 VAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-D----K 381 (917)
T ss_pred HhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-c----c
Confidence 99999999986 9999999999999999999999999999999999999999999999999998774 22211 0 0
Q ss_pred ccCCCccHHHHHHHHHHH---hcC------CCCchHHHHHhhhcCCCC--CC-------ccccceeeecCCeEEEEEeCe
Q 004479 468 SCCIPNCEKEALAVAAAM---EKG------TTHPIGRAVVDHSIGKDL--PS-------VSIDRFEYFPGRGLTATVNGI 529 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~~---e~~------s~hP~~~Ai~~~~~~~~~--~~-------~~~~~~~~~~g~g~~~~v~~~ 529 (750)
....+....+.+..++.+ ... ..+|++.||++++.+.+. .. ..+..++|.+.|++|+++...
T Consensus 382 ~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~ 461 (917)
T COG0474 382 DLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKT 461 (917)
T ss_pred ccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEc
Confidence 000000011222222221 122 569999999999976543 21 235678888899999988752
Q ss_pred eeccCCCceeeeccCchHHHhhhccC--------hhHHHHHHHHhcc-cCCCCcEEEE----------------eeccCc
Q 004479 530 ESGTEGGKELKASLGSVDFITSLCKS--------EDESRKIKEAVNG-SSYGRGFVHA----------------ALSVNE 584 (750)
Q Consensus 530 ~~~~~~~~~~~~~kGs~~~i~~~~~~--------~~~~~~~~~~~~~-~~~g~~~~~~----------------~~~~~~ 584 (750)
.+++++.++|||||.|+++|+. ++..+.+.+..+. ..+|.++..+ ..++-.
T Consensus 462 ----~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~ 537 (917)
T COG0474 462 ----DEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLV 537 (917)
T ss_pred ----CCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccce
Confidence 2556899999999999998874 1112222211110 0111111000 000112
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-----------------------------
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----------------------------- 635 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----------------------------- 635 (750)
.+|+++|+||+|+|++++|+.|++ +||++||+||||+.||.+||++|||.
T Consensus 538 ~lGl~g~~Dppr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~ 616 (917)
T COG0474 538 FLGLTGIEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEEL 616 (917)
T ss_pred eehhhhccCCCCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhC
Confidence 389999999999999999999999 89999999999999999999999973
Q ss_pred eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHH
Q 004479 636 EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSR 715 (750)
Q Consensus 636 ~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R 715 (750)
.||||++|+||.++|+.||++ |+.|+|+|||+|||||||+||||||||+.|+|+|+++||+++++|+|..+..++.+||
T Consensus 617 ~VfARvsP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR 695 (917)
T COG0474 617 SVFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGR 695 (917)
T ss_pred cEEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhH
Confidence 299999999999999999999 9999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 004479 716 QTTSLVKQNVALALSCIILASLP 738 (750)
Q Consensus 716 ~~~~~i~~ni~~al~~~~~~~i~ 738 (750)
+++.|+++.+.+.+..|+...+.
T Consensus 696 ~~~~ni~k~i~~~l~~n~~~~~~ 718 (917)
T COG0474 696 RVYVNIKKFILYLLSKNVGEVLT 718 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875544
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-85 Score=794.11 Aligned_cols=549 Identities=21% Similarity=0.256 Sum_probs=443.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++++|.+++++++++.+...+..++++|+++.+++|+++.+.+++|+|+| ++++|+++
T Consensus 65 ~~iL~~aails~~~~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg----------~~~~I~a~ 134 (1053)
T TIGR01523 65 CMVLIIAAAISFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNG----------KSDAIDSH 134 (1053)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCC----------eeeecCHh
Confidence 45566788889999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccC---------------CccCCCceecceeEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVG---------------DRIPGGARNLDGRMILKA 312 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g---------------~~v~aGt~~~~G~~~v~v 312 (750)
||+|||+|.+++||+|||||+|++++ ..||||+|||||.||.|.+. +.+|+||.+.+|.+.+.|
T Consensus 135 eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vV 214 (1053)
T TIGR01523 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGIC 214 (1053)
T ss_pred hCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEE
Confidence 99999999999999999999999985 69999999999999999752 347999999999999999
Q ss_pred EEeccccHHHHHHHHHHHhhc-----------------------------------CCchhHHHHHHHHhHHHHHHHHHH
Q 004479 313 TKTWNESTLNRIVQLTEEAQL-----------------------------------NKPKLQRWLDEFGEQYSKVVVVLS 357 (750)
Q Consensus 313 ~~~g~~t~~~~i~~~v~~a~~-----------------------------------~k~~~q~~~~~~a~~~~~~vl~~a 357 (750)
+++|.+|.+|||.+++.+... .++|+|+.+++++.++..+.++++
T Consensus 215 vatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~ 294 (1053)
T TIGR01523 215 IATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFA 294 (1053)
T ss_pred EEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875431 248999999999998877776666
Q ss_pred HHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEc
Q 004479 358 LAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFD 436 (750)
Q Consensus 358 ~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fD 436 (750)
++++++..+ . .+...+..+++++++++|++|+++ +++++.+..+|+++++++|+.+++|+||++++||+|
T Consensus 295 ~~~~~~~~~--~-------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsD 365 (1053)
T TIGR01523 295 IIVMAAHKF--D-------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSD 365 (1053)
T ss_pred HHHHHHHhh--h-------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEec
Confidence 655433211 0 112456778999999999999986 999999999999999999999999999999999999
Q ss_pred CCCCCcCCceEEEEEEecC-Cc--------ccccC--C---c-----------c----cc--------ccCC-C-----c
Q 004479 437 KTGTLTTGGLMFKAIEPIY-GH--------WIRSK--K---T-----------H----DI--------SCCI-P-----N 473 (750)
Q Consensus 437 KTGTLT~g~~~v~~i~~~~-~~--------~~~~~--~---~-----------~----~~--------~~~~-~-----~ 473 (750)
||||||+|+|+|++++... +. .+... . . . .. .... + .
T Consensus 366 KTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1053)
T TIGR01523 366 KTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMD 445 (1053)
T ss_pred CcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccH
Confidence 9999999999999987532 10 00000 0 0 0 00 0000 0 0
Q ss_pred cHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCC--------------------------------C
Q 004479 474 CEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLP--------------------------------S 508 (750)
Q Consensus 474 ~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~--------------------------------~ 508 (750)
.-.+++..++.+.. ...+|++.|++.++.+.+++ .
T Consensus 446 ~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1053)
T TIGR01523 446 LFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQF 525 (1053)
T ss_pred HHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccccccc
Confidence 01234443333211 13589999999887543321 1
Q ss_pred ccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh-------------HHHHHHHHh-cccCCCCc
Q 004479 509 VSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED-------------ESRKIKEAV-NGSSYGRG 574 (750)
Q Consensus 509 ~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~-------------~~~~~~~~~-~~~~~g~~ 574 (750)
..+..++|.+.+++|+++.... ++++++.|+||+||.++++|.... ..+++.+.. .....|.+
T Consensus 526 ~~~~~~pFds~rK~msvv~~~~---~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlR 602 (1053)
T TIGR01523 526 EFIAEFPFDSEIKRMASIYEDN---HGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602 (1053)
T ss_pred ceEEEeccCCCCCeEEEEEEeC---CCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCe
Confidence 2345677888898888886421 123578899999999999996421 122222222 22344655
Q ss_pred EEEEeec------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH
Q 004479 575 FVHAALS------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN 630 (750)
Q Consensus 575 ~~~~~~~------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~ 630 (750)
++.++.. +-..+|+++++||+||+++++|++||+ +|++++|+|||++.||.+||+
T Consensus 603 vLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~ 681 (1053)
T TIGR01523 603 VLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQ 681 (1053)
T ss_pred EEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 5544321 001389999999999999999999999 899999999999999999999
Q ss_pred HcCCc-------------------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHH
Q 004479 631 AVGIN-------------------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPA 673 (750)
Q Consensus 631 ~~GI~-------------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapA 673 (750)
++||. .||||++|+||.++|+.+|++ |++|+|+|||+||+||
T Consensus 682 ~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapa 760 (1053)
T TIGR01523 682 EVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPS 760 (1053)
T ss_pred HcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHH
Confidence 99994 299999999999999999998 9999999999999999
Q ss_pred HHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004479 674 LAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVL 741 (750)
Q Consensus 674 L~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~ 741 (750)
|++||||||||..|+|+|+++||++|++|||+.|++++++||+++++|++++.|.++.|+..+++.++
T Consensus 761 Lk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 761 LKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred HHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999779999999999999999999999999999999999999999999999877665433
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-85 Score=790.08 Aligned_cols=536 Identities=21% Similarity=0.262 Sum_probs=436.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCC
Q 004479 183 GNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262 (750)
Q Consensus 183 g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge 262 (750)
+.|++++++++++.++..+..+.+.|+++.+++|.++.|.+++|+|+| ++++|+++||+|||+|.|++||
T Consensus 102 ~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg----------~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 102 DNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG----------EKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC----------EEEEeeHHHCCCCCEEEECCCC
Confidence 357788888888888888899999999999999999999999999987 8999999999999999999999
Q ss_pred ccccCcEEEece-eeeeeccccCCcceEeeccCC----------ccCCCceecceeEEEEEEEeccccHHHHHHHHHHHh
Q 004479 263 AVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGD----------RIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEA 331 (750)
Q Consensus 263 ~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~----------~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a 331 (750)
+|||||++++|+ ..||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|+++|.+|.+|++.++++++
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 999999999997 599999999999999999875 589999999999999999999999999999999999
Q ss_pred hcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHH
Q 004479 332 QLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISS 410 (750)
Q Consensus 332 ~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~ 410 (750)
+.+++|+|+.+++++++++.++++++++++++.. ..+ ..+...+..++++++++|||+|+++ |++++.+..+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSL------ILG-YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hhc-CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 9899999999999999998887777766544321 111 2345678889999999999999987 9999999999
Q ss_pred HHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccc----cccCCCccHHHHHHHHHHHh
Q 004479 411 CARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD----ISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 411 ~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~a~~e 486 (750)
|+++|+++|+++++|+||++|++|||||||||+|+|+|++++.. +..+..+.... .........+.++..++.++
T Consensus 325 m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn 403 (997)
T TIGR01106 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD-NQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCN 403 (997)
T ss_pred HHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEEC-CeEEecCCccCCCCccCCcccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999753 22221111000 00000011224555444442
Q ss_pred c----------------CCCCchHHHHHhhhcCCCC-------CCccccceeeecCCeEEEEEeCeeeccCCCceeeecc
Q 004479 487 K----------------GTTHPIGRAVVDHSIGKDL-------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASL 543 (750)
Q Consensus 487 ~----------------~s~hP~~~Ai~~~~~~~~~-------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~k 543 (750)
. ...+|++.|+++++..... ....+..++|.+.+++++++..... .++++++.|+|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~-~~~~~~~~~~K 482 (997)
T TIGR01106 404 RAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENED-PRDPRHLLVMK 482 (997)
T ss_pred CCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccC-CCCceEEEEEe
Confidence 1 1247899999998753211 1223455777778887766543110 11346788999
Q ss_pred CchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec-----------------------cCceEEE
Q 004479 544 GSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS-----------------------VNEKVTL 588 (750)
Q Consensus 544 Gs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~-----------------------~~~~lG~ 588 (750)
|+||.++++|+.. +..+.+.+.. .....|.+++.++.. +-..+|+
T Consensus 483 GApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGl 562 (997)
T TIGR01106 483 GAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562 (997)
T ss_pred CChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEE
Confidence 9999999999631 1122222222 123345555433310 0014999
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------------------
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--------------------------------- 635 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--------------------------------- 635 (750)
++++||+||+++++|++|++ +|++++|+|||++.||.++|+++||.
T Consensus 563 i~i~Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G 641 (997)
T TIGR01106 563 ISMIDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHG 641 (997)
T ss_pred EeccCCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEh
Confidence 99999999999999999999 79999999999999999999999993
Q ss_pred --------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhc
Q 004479 636 --------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVA 695 (750)
Q Consensus 636 --------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aA 695 (750)
.||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||..|+|+|+++|
T Consensus 642 ~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 642 SDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred HHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 199999999999999999998 99999999999999999999999999977999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 696 DVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPS 739 (750)
Q Consensus 696 DivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~ 739 (750)
|++|++|||+.|++++++||+++.|+++++.|.++.|+..+++.
T Consensus 721 DivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 721 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred ceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999987665553
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=781.03 Aligned_cols=554 Identities=21% Similarity=0.255 Sum_probs=443.9
Q ss_pred HHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcC
Q 004479 169 HVLMAFAAFASIFMG----------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVS 238 (750)
Q Consensus 169 ~~L~~la~~~a~~~g----------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~ 238 (750)
..++.++++++++++ .|.+++++++++.+...+..++++|+++.+++|.++.|.+++|+|+|
T Consensus 10 ~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg-------- 81 (917)
T TIGR01116 10 VRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDG-------- 81 (917)
T ss_pred HHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECC--------
Confidence 344446666666664 68899998888888889999999999999999999999999999987
Q ss_pred CCcEEEEecCCcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccC-------------CccCCCceec
Q 004479 239 DLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVG-------------DRIPGGARNL 304 (750)
Q Consensus 239 ~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g-------------~~v~aGt~~~ 304 (750)
++++|+++||+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.++ +.+|+||.+.
T Consensus 82 --~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 82 --RWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred --EEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 8999999999999999999999999999999996 79999999999999999876 6799999999
Q ss_pred ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc---chhhhH
Q 004479 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT---SVCRGS 381 (750)
Q Consensus 305 ~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~---~~~~~~ 381 (750)
+|.+.++|+++|.+|.+|||.+++++++.+++|+|+.+++++.++++++++++++++++....+.....+. ..+...
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999988877776665443311100000010 112234
Q ss_pred HHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcc--
Q 004479 382 VYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW-- 458 (750)
Q Consensus 382 ~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~-- 458 (750)
+..++++++++|||+|+++ +++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++++.++..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 5567899999999999997 9999999999999999999999999999999999999999999999999998654221
Q ss_pred ---c--ccCCccccc---c----C---CCccHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCC---
Q 004479 459 ---I--RSKKTHDIS---C----C---IPNCEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLP--- 507 (750)
Q Consensus 459 ---~--~~~~~~~~~---~----~---~~~~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~--- 507 (750)
+ ....+.... . . .....++++..++.+.. ...+|++.|+++++.+.+..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 0 000000000 0 0 00011223333332221 12589999999887543321
Q ss_pred --------------------CccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----------
Q 004479 508 --------------------SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE----------- 556 (750)
Q Consensus 508 --------------------~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~----------- 556 (750)
...+..++|.+.|++|+++... +++++.|+||+||.++++|+..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-----~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-----STGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-----CCcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 1134456677788888887642 4567889999999999999641
Q ss_pred -hHHHHHHHHhc-ccC-CCCcEEEEeecc-------------------C---ceEEEEEecCCCchhHHHHHHHHHhcCC
Q 004479 557 -DESRKIKEAVN-GSS-YGRGFVHAALSV-------------------N---EKVTLIHLEDRPRPGVSDVIAELKDHAR 611 (750)
Q Consensus 557 -~~~~~~~~~~~-~~~-~g~~~~~~~~~~-------------------~---~~lG~i~~~D~lr~~a~~~I~~Lk~~ag 611 (750)
+..+++.+... ... .|.+++.++... + ..+|+++++||+|++++++|+.||+ +|
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~-aG 553 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRT-AG 553 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHH-CC
Confidence 11222322222 233 455555443211 1 1389999999999999999999999 89
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCc-------------------------------eEEecCCHhhHHHHHHHHHhhcCCe
Q 004479 612 LRVMMLTGDHESSAQRVANAVGIN-------------------------------EVYCSLKPEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 612 i~v~mlTGD~~~tA~~iA~~~GI~-------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~ 660 (750)
++++|+|||+++||.++|+++||. .||||++|+||.++|+.+|++ |++
T Consensus 554 I~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~ 632 (917)
T TIGR01116 554 IRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ-GEI 632 (917)
T ss_pred CEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-CCe
Confidence 999999999999999999999995 299999999999999999987 999
Q ss_pred EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 661 LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV 740 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~ 740 (750)
|+|+|||+||+|||++|||||+|| .|+++|+++||+++.+|||+.|++++++||++++|+++++.|.++.|+...++.+
T Consensus 633 va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 633 VAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred EEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 999999999999999999999999 4899999999999999999999999999999999999999999998876655543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-81 Score=766.08 Aligned_cols=538 Identities=19% Similarity=0.217 Sum_probs=424.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcC
Q 004479 172 MAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVE 251 (750)
Q Consensus 172 ~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~ 251 (750)
..++++++++.++|.+++++++++.+...+..+.++|+.+.++++.. .|..++|+|+| ++++|+++||+
T Consensus 180 ~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg----------~~~~I~s~eLv 248 (1054)
T TIGR01657 180 QVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNG----------KWVTIASDELV 248 (1054)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECC----------EEEEEEcccCC
Confidence 33454555555567788888888888899999999999999998765 57889999987 89999999999
Q ss_pred CCCEEEEc--CCCccccCcEEEeceeeeeeccccCCcceEeeccC------C------------ccCCCceecc------
Q 004479 252 VGSYILVG--AGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVG------D------------RIPGGARNLD------ 305 (750)
Q Consensus 252 ~GDiI~v~--~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g------~------------~v~aGt~~~~------ 305 (750)
|||+|.|+ +|++|||||+|++|++.||||+|||||.|+.|.+. + .+|+||.+.+
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g 328 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG 328 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC
Confidence 99999999 99999999999999999999999999999999863 1 3899999984
Q ss_pred -eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHH
Q 004479 306 -GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYR 384 (750)
Q Consensus 306 -G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~ 384 (750)
|.+.++|++||.+|..|++.+.+...+..++++++...++...+..+ +++.+++..+. ... ....+...+.+
T Consensus 329 ~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~----a~i~~i~~~~~--~~~-~~~~~~~~~l~ 401 (1054)
T TIGR01657 329 DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL----ALIGFIYTIIE--LIK-DGRPLGKIILR 401 (1054)
T ss_pred CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHH----HHHHHHHHHHH--HHH-cCCcHHHHHHH
Confidence 88999999999999999999999888888888888877765544322 22222111111 111 12245677899
Q ss_pred HHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCC
Q 004479 385 ALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKK 463 (750)
Q Consensus 385 al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~ 463 (750)
+++++++++||+||++ +++++.|+.+|+|+||+||++.++|.+|++|++|||||||||+|+|+|.++++.+........
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~ 481 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI 481 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999865432110000
Q ss_pred ccccccCCCccHHHHHHHHHHHh-------cCCCCchHHHHHhhhcC-----CC-----------------CCCccccce
Q 004479 464 THDISCCIPNCEKEALAVAAAME-------KGTTHPIGRAVVDHSIG-----KD-----------------LPSVSIDRF 514 (750)
Q Consensus 464 ~~~~~~~~~~~~~~~l~~~a~~e-------~~s~hP~~~Ai~~~~~~-----~~-----------------~~~~~~~~~ 514 (750)
.... ........+...+.+. ....+|++.|++++... .. .....+..|
T Consensus 482 ~~~~---~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~ 558 (1054)
T TIGR01657 482 VTED---SSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558 (1054)
T ss_pred cccc---cccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEE
Confidence 0000 0011222233233322 23479999999987521 00 011224568
Q ss_pred eeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHh-cccCCCCcEEEEeecc-----------
Q 004479 515 EYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAV-NGSSYGRGFVHAALSV----------- 582 (750)
Q Consensus 515 ~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~----------- 582 (750)
+|.+.+++|+++.... ++++++.++|||||.|.++|......+.+.+.. .....|.+++.++...
T Consensus 559 pF~S~~krMsvvv~~~---~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~ 635 (1054)
T TIGR01657 559 QFSSALQRMSVIVSTN---DERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD 635 (1054)
T ss_pred eecCCCCEEEEEEEEc---CCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh
Confidence 8888998888876432 245678999999999999998532222222211 1234466665544210
Q ss_pred ---------CceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc------------------
Q 004479 583 ---------NEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------------------ 635 (750)
Q Consensus 583 ---------~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------------------ 635 (750)
-..+|+++|+||+||+++++|++||+ +|++++|+||||+.||.+||+++||.
T Consensus 636 ~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~-agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~ 714 (1054)
T TIGR01657 636 LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGK 714 (1054)
T ss_pred ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCC
Confidence 11389999999999999999999999 89999999999999999999999992
Q ss_pred -----------------------------------------------------------------eEEecCCHhhHHHHH
Q 004479 636 -----------------------------------------------------------------EVYCSLKPEDKLNHV 650 (750)
Q Consensus 636 -----------------------------------------------------------------~v~a~~~P~~K~~~V 650 (750)
.||||++|+||.++|
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV 794 (1054)
T TIGR01657 715 PNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLV 794 (1054)
T ss_pred CceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHH
Confidence 299999999999999
Q ss_pred HHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 651 KRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS 730 (750)
Q Consensus 651 ~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~ 730 (750)
+.||+. |++|+|||||+||+||||+||||||||+ +|++ .+||+++++|+|+.++++|++||+++.++++.+.|.+.
T Consensus 795 ~~lq~~-g~~V~m~GDG~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~ 870 (1054)
T TIGR01657 795 ELLQKL-DYTVGMCGDGANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMAL 870 (1054)
T ss_pred HHHHhC-CCeEEEEeCChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 9999999999999999999999999986 3544 88999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 004479 731 CIILASLP 738 (750)
Q Consensus 731 ~~~~~~i~ 738 (750)
|+++..+.
T Consensus 871 ~~~~~~~~ 878 (1054)
T TIGR01657 871 YSLIQFYS 878 (1054)
T ss_pred HHHHHHHH
Confidence 88765443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-81 Score=715.72 Aligned_cols=478 Identities=31% Similarity=0.431 Sum_probs=413.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEE
Q 004479 193 AMFNLAHIAEEFFTSRAMVDVKELKE--NYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEV 270 (750)
Q Consensus 193 ~~~~l~~~~e~~~~~ra~~~l~~L~~--~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~v 270 (750)
++..++.+++.+.++++.+.+++|.+ +.|++++|+|+| +++|++++|+|||+|.+++||+|||||+|
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-----------~~~V~~~~l~~GDiv~v~~G~~iP~Dg~v 72 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-----------WKEIPASDLVPGDIVLVKSGEIVPADGVL 72 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-----------eEEEEHHHCCCCCEEEECCCCEeeeeEEE
Confidence 34556778899999999999999998 899999999853 57899999999999999999999999999
Q ss_pred EeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHH-hHH
Q 004479 271 YQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG-EQY 349 (750)
Q Consensus 271 l~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a-~~~ 349 (750)
++|++.||||+|||||.|+.|.+|+.+++|+.+.+|.+.++|+++|.+|+.++|..++++++..|+++|+..++++ .++
T Consensus 73 l~g~~~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~ 152 (499)
T TIGR01494 73 LSGSCFVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIF 152 (499)
T ss_pred EEccEEEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988999999999999 788
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhc
Q 004479 350 SKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALA 428 (750)
Q Consensus 350 ~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg 428 (750)
++++++++++++++..+. .+ ....+..++.+++++++++|||+|+++ |+++..+..+++++|+++|+++++|+||
T Consensus 153 ~~~~~~la~~~~~~~~~~-~~---~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~ 228 (499)
T TIGR01494 153 ILFVLLIALAVFLFWAIG-LW---DPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELG 228 (499)
T ss_pred HHHHHHHHHHHHHHHHHH-Hc---ccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhcc
Confidence 888877777664432111 11 100255689999999999999999997 9999999999999999999999999999
Q ss_pred cccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCC
Q 004479 429 SCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPS 508 (750)
Q Consensus 429 ~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~ 508 (750)
++|++|||||||||+|+|+|+++++.++ |+.+.||+++|++++++.+..
T Consensus 229 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------------------------~~~s~hp~~~ai~~~~~~~~~-- 277 (499)
T TIGR01494 229 KVDYICSDKTGTLTKNEMSFKKVSVLGG-----------------------------EYLSGHPDERALVKSAKWKIL-- 277 (499)
T ss_pred CCcEEEeeCCCccccCceEEEEEEecCC-----------------------------CcCCCChHHHHHHHHhhhcCc--
Confidence 9999999999999999999999875321 356899999999999865432
Q ss_pred ccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEE
Q 004479 509 VSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTL 588 (750)
Q Consensus 509 ~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~ 588 (750)
...+|+..+ +|+.+.+.+. ++ .++||+++++.+.|...++ ...+ . ...|.+.++++. .+..+|+
T Consensus 278 -~~~~f~~~~-~~~~~~~~~~-----~~---~~~~G~~~~i~~~~~~~~~--~~~~-~--~~~g~~~~~~a~-~~~~~g~ 341 (499)
T TIGR01494 278 -NVFEFSSVR-KRMSVIVRGP-----DG---TYVKGAPEFVLSRVKDLEE--KVKE-L--AQSGLRVLAVAS-KETLLGL 341 (499)
T ss_pred -ceeccCCCC-ceEEEEEecC-----Cc---EEEeCCHHHHHHhhHHHHH--HHHH-H--HhCCCEEEEEEE-CCeEEEE
Confidence 345677776 7887777641 12 3689999999988753211 1111 1 124556666553 3567999
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCc
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGI 668 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~ 668 (750)
+.++|++|++++++|+.|++ +|++++|+|||++.+|.++|+++|| |++++|+||.++|+.+|++ |+.|+|+|||+
T Consensus 342 i~l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~lgi---~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ 416 (499)
T TIGR01494 342 LGLEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKELGI---FARVTPEEKAALVEALQKK-GRVVAMTGDGV 416 (499)
T ss_pred EEecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCc---eeccCHHHHHHHHHHHHHC-CCEEEEECCCh
Confidence 99999999999999999999 7999999999999999999999997 8999999999999999988 99999999999
Q ss_pred cCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 669 NDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGF 743 (750)
Q Consensus 669 NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~ 743 (750)
||+|||++|||||+|| |+++||++|+++++..++.++++||+++++++||+.|+++||++.++++++++
T Consensus 417 nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 417 NDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred hhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 68999999999999999999999999999999999999999988766655543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-68 Score=654.73 Aligned_cols=525 Identities=18% Similarity=0.194 Sum_probs=394.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCc
Q 004479 189 GLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDC 268 (750)
Q Consensus 189 ~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg 268 (750)
++++++..+.+++|++.++|+++.+ .++.++|+|+++ ++++++++||+|||+|.|++||+|||||
T Consensus 58 ~~v~~~~~~~~~~ed~~r~~~d~~~------n~~~~~v~~~~~---------~~~~i~~~~l~~GDiv~l~~g~~iPaD~ 122 (1057)
T TIGR01652 58 AFVLIVTAIKEAIEDIRRRRRDKEV------NNRLTEVLEGHG---------QFVEIPWKDLRVGDIVKVKKDERIPADL 122 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHH------hCcEEEEECCCC---------cEEEeeeecccCCCEEEEcCCCcccceE
Confidence 4455566788999999999998654 467899998632 7899999999999999999999999999
Q ss_pred EEEe-----ceeeeeeccccCCcceEeeccC------------------------------------------------C
Q 004479 269 EVYQ-----GTATITIEHLTGEVKPLEAKVG------------------------------------------------D 295 (750)
Q Consensus 269 ~vl~-----G~~~Vdes~LTGEs~pv~k~~g------------------------------------------------~ 295 (750)
+|++ |.+.||||.|||||.|+.|++. +
T Consensus 123 ~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N 202 (1057)
T TIGR01652 123 LLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDN 202 (1057)
T ss_pred EEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHH
Confidence 9997 7799999999999999999742 2
Q ss_pred ccCCCceecc-eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhh------
Q 004479 296 RIPGGARNLD-GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLF------ 368 (750)
Q Consensus 296 ~v~aGt~~~~-G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~------ 368 (750)
.++.||.+.+ |.+.+.|++||.+|.+++ .......+++++|+.++++..++..+.++++++.+++..++.
T Consensus 203 ~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~ 279 (1057)
T TIGR01652 203 ILLRGCTLRNTDWVIGVVVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKD 279 (1057)
T ss_pred hHhcCCEecCCCeEEEEEEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCC
Confidence 3567888887 999999999999998765 344556678999999999998887777777776666543322
Q ss_pred hhccc-c------cchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHH------HHHHHc----CccccCchHHHhhccc
Q 004479 369 KWSFI-G------TSVCRGSVYRALGLMVAASPCALAVA-PLAYATAI------SSCARK----GILLKGGQVLDALASC 430 (750)
Q Consensus 369 ~~~~~-~------~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~------~~~~~~----gilvk~~~~lE~lg~v 430 (750)
.|+.. . ...+...+.+++.++...+|.+|++. .++...+. .+|.++ ++++|+.+.+|+||++
T Consensus 280 ~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v 359 (1057)
T TIGR01652 280 LWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQV 359 (1057)
T ss_pred ccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCe
Confidence 12110 0 00112256678888899999999875 77766666 567764 5999999999999999
Q ss_pred cEEEEcCCCCCcCCceEEEEEEecCCcccccCCc----------c----------cccc--------------CCCcc--
Q 004479 431 HTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT----------H----------DISC--------------CIPNC-- 474 (750)
Q Consensus 431 ~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~----------~----------~~~~--------------~~~~~-- 474 (750)
++||+|||||||+|+|+++++... |..+..... . .... .....
T Consensus 360 ~~I~sDKTGTLT~N~M~~~~~~i~-g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1057)
T TIGR01652 360 EYIFSDKTGTLTQNIMEFKKCSIA-GVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAK 438 (1057)
T ss_pred eEEEEcCCCceeeeeEEEEEEEEC-CEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhH
Confidence 999999999999999999999743 322211000 0 0000 00000
Q ss_pred -HHHHHHHHHHH-----h---cC-------CCCchHHHHHhhhcCCCCCC---------------------ccccceeee
Q 004479 475 -EKEALAVAAAM-----E---KG-------TTHPIGRAVVDHSIGKDLPS---------------------VSIDRFEYF 517 (750)
Q Consensus 475 -~~~~l~~~a~~-----e---~~-------s~hP~~~Ai~~~~~~~~~~~---------------------~~~~~~~~~ 517 (750)
..+.+...+.+ + .. +.+|.+.|+++++...++.. ..+..+++.
T Consensus 439 ~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 518 (1057)
T TIGR01652 439 RINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFN 518 (1057)
T ss_pred HHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccC
Confidence 11222222211 1 11 46899999999875544321 112235667
Q ss_pred cCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh--HHHHHHHHh-cccCCCCcEEEEeec-------------
Q 004479 518 PGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED--ESRKIKEAV-NGSSYGRGFVHAALS------------- 581 (750)
Q Consensus 518 ~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~--~~~~~~~~~-~~~~~g~~~~~~~~~------------- 581 (750)
+.|++|+++...+ +++++.++||+++.|.++|...+ ..+.+.+.. .....|.+++..+..
T Consensus 519 s~rKrmSviv~~~----~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~ 594 (1057)
T TIGR01652 519 SDRKRMSVIVRNP----DGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEE 594 (1057)
T ss_pred CCCCeEEEEEEeC----CCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHH
Confidence 7787787776432 45688999999999999997421 122222222 123345555443311
Q ss_pred ------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--
Q 004479 582 ------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-- 635 (750)
Q Consensus 582 ------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-- 635 (750)
+-..+|+++++||+|++++++|+.||+ |||++||+|||+.+||.+||++|||.
T Consensus 595 ~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~~ii~~ 673 (1057)
T TIGR01652 595 YNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSCRLLSR 673 (1057)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 011389999999999999999999999 89999999999999999999999872
Q ss_pred ----------------------------------------------------------------------e--EEecCCH
Q 004479 636 ----------------------------------------------------------------------E--VYCSLKP 643 (750)
Q Consensus 636 ----------------------------------------------------------------------~--v~a~~~P 643 (750)
+ ||||++|
T Consensus 674 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP 753 (1057)
T TIGR01652 674 NMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753 (1057)
T ss_pred CCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCH
Confidence 0 8999999
Q ss_pred hhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHH-HHHHHHHHHHH
Q 004479 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCV-AKSRQTTSLVK 722 (750)
Q Consensus 644 ~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i-~~~R~~~~~i~ 722 (750)
+||.++|+.+|+..|++|+|+|||+||+|||++|||||++.+.+..+|+++||++|. +|+.|.+++ .+||.++++++
T Consensus 754 ~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~ 831 (1057)
T TIGR01652 754 SQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRIS 831 (1057)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHH
Confidence 999999999998558999999999999999999999999865444479999999995 599999998 67999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004479 723 QNVALALSCIILASLPS 739 (750)
Q Consensus 723 ~ni~~al~~~~~~~i~~ 739 (750)
+.+.|.+..|++..++.
T Consensus 832 ~~i~~~~~kn~~~~~~~ 848 (1057)
T TIGR01652 832 KMILYFFYKNLIFAIIQ 848 (1057)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998776663
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-70 Score=604.89 Aligned_cols=526 Identities=22% Similarity=0.272 Sum_probs=410.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEE
Q 004479 192 LAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVY 271 (750)
Q Consensus 192 ~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl 271 (750)
...+.+...+..|+..++.+-++...++.|..++|+|+| +...+..+|+++||++.++-|++||||.+++
T Consensus 133 ~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg----------~k~~i~~eelVvGD~v~vk~GdrVPADiRii 202 (1019)
T KOG0203|consen 133 AAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDG----------EKMTINAEELVVGDLVEVKGGDRVPADIRII 202 (1019)
T ss_pred EEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecc----------eeEEechhhcccccceeeccCCcccceeEEE
Confidence 333344455677888999999999999999999999998 7899999999999999999999999999999
Q ss_pred ecee-eeeeccccCCcceEeeccC----------CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHH
Q 004479 272 QGTA-TITIEHLTGEVKPLEAKVG----------DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQR 340 (750)
Q Consensus 272 ~G~~-~Vdes~LTGEs~pv~k~~g----------~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~ 340 (750)
++.. ++|+|+|||||.|..+.+. +.-+.+|...+|..+..|.++|.+|.+|+|..+...-...++|+++
T Consensus 203 s~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ 282 (1019)
T KOG0203|consen 203 SATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAK 282 (1019)
T ss_pred EecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchh
Confidence 9985 9999999999999998763 2246688888999999999999999999999999988899999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCcccc
Q 004479 341 WLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLK 419 (750)
Q Consensus 341 ~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk 419 (750)
.+++|..++..+.+.+++..+++...+ . ..+..++...+.++|+.+|.+|+.. +..+....++|+++++++|
T Consensus 283 ei~~fi~~it~vAi~~~i~fF~~~~~~-g------y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vk 355 (1019)
T KOG0203|consen 283 EIEHFIHIITGVAIFLGISFFILALIL-G------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVK 355 (1019)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhh-c------chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEe
Confidence 999999988887777766665444322 1 2345567778899999999999875 8888889999999999999
Q ss_pred CchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccC--CccccccCC-CccHHHHHHHHHHHhc---------
Q 004479 420 GGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSK--KTHDISCCI-PNCEKEALAVAAAMEK--------- 487 (750)
Q Consensus 420 ~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~--~~~~~~~~~-~~~~~~~l~~~a~~e~--------- 487 (750)
+.++.|+||+..+||.|||||||+|+|+|..+|..+.....+. +......+. ...-.++++.+.-+.+
T Consensus 356 nLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~d 435 (1019)
T KOG0203|consen 356 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDD 435 (1019)
T ss_pred eeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccC
Confidence 9999999999999999999999999999999986443221111 000111111 1112233333332221
Q ss_pred -------CCCCchHHHHHhhhcCC---------CCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhh
Q 004479 488 -------GTTHPIGRAVVDHSIGK---------DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITS 551 (750)
Q Consensus 488 -------~s~hP~~~Ai~~~~~~~---------~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~ 551 (750)
-..++.+.|+++++..- ..+.....+|++.....++....... ++.++.+..||+||.+++
T Consensus 436 vPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~---~~~~~~l~mKGape~il~ 512 (1019)
T KOG0203|consen 436 VPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDP---SDPRFLLVMKGAPERILD 512 (1019)
T ss_pred CceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCC---CCccceeeecCChHHHHh
Confidence 13367778888877321 11111223444444444433322211 356778889999999999
Q ss_pred hccChh-----------HHHHHHHHh-ccc-----------------CCCCcEEEEe----e--ccCceEEEEEecCCCc
Q 004479 552 LCKSED-----------ESRKIKEAV-NGS-----------------SYGRGFVHAA----L--SVNEKVTLIHLEDRPR 596 (750)
Q Consensus 552 ~~~~~~-----------~~~~~~~~~-~~~-----------------~~g~~~~~~~----~--~~~~~lG~i~~~D~lr 596 (750)
+|+... ..+.+.+.. ... .++.+..+-. + ....++|++.+-||+|
T Consensus 513 ~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR 592 (1019)
T KOG0203|consen 513 RCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPR 592 (1019)
T ss_pred hccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCc
Confidence 998620 011111111 111 1122221110 0 0112399999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----------------------------------------
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE---------------------------------------- 636 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~---------------------------------------- 636 (750)
..+++++..||. |||+++|+|||++.||.++|+++||..
T Consensus 593 ~~vP~Av~~Crs-AGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~ 671 (1019)
T KOG0203|consen 593 AAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSS 671 (1019)
T ss_pred ccCchhhhhhhh-hCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCH
Confidence 999999999999 899999999999999999999999741
Q ss_pred -------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 637 -------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 637 -------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
||||.||+||+-+|+..|++ |.+|+.+|||+||+||||.||||||||..|+|+++++||++|+|||
T Consensus 672 ~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDN 750 (1019)
T KOG0203|consen 672 EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 750 (1019)
T ss_pred HHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCc
Confidence 99999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 704 ISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPS 739 (750)
Q Consensus 704 l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~ 739 (750)
|++|+.-+.+||-++.|.|+.|+|.++.|+--+.|.
T Consensus 751 FASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 751 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred chhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 999999999999999999999999999887766664
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-68 Score=557.10 Aligned_cols=477 Identities=24% Similarity=0.379 Sum_probs=377.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEec
Q 004479 195 FNLAHIAEEFFTSRAMVDVKELKENYPD-SVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQG 273 (750)
Q Consensus 195 ~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G 273 (750)
+.+..+.|.+.+.|....-..|++.+.+ .++++++++ +++.|+..+|+.||+|+|+.||.||+||.|++|
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g---------~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG 146 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADG---------SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG 146 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCC---------CeeeccccccccCCEEEEecCCCccCCCeEEee
Confidence 3456677888888877777777665443 567776643 899999999999999999999999999999999
Q ss_pred eeeeeeccccCCcceEeeccC---CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHH
Q 004479 274 TATITIEHLTGEVKPLEAKVG---DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYS 350 (750)
Q Consensus 274 ~~~Vdes~LTGEs~pv~k~~g---~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~ 350 (750)
.++||||.+||||.||-|++| +.|-.||.+++..+++++|....+|.+.|++.++|.++.+|+|-+--++-+-.-++
T Consensus 147 ~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT 226 (681)
T COG2216 147 VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT 226 (681)
T ss_pred eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH
Confidence 999999999999999999998 78999999999999999999999999999999999999999998776654433222
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhh-hHHHHHHHHHHHHHHcCccccCchHHHhhcc
Q 004479 351 KVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALA-VAPLAYATAISSCARKGILLKGGQVLDALAS 429 (750)
Q Consensus 351 ~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~-lap~a~~~~~~~~~~~gilvk~~~~lE~lg~ 429 (750)
.+ ++++++..+-+..+..+ -.-.+...++++|..+|..++ +.+.-=..|+.|+.+.+++-++++++|..|.
T Consensus 227 li-----FL~~~~Tl~p~a~y~~g---~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGD 298 (681)
T COG2216 227 LI-----FLLAVATLYPFAIYSGG---GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGD 298 (681)
T ss_pred HH-----HHHHHHhhhhHHHHcCC---CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCC
Confidence 22 11111111111111101 112466778899999999885 3344446688999999999999999999999
Q ss_pred ccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCc
Q 004479 430 CHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSV 509 (750)
Q Consensus 430 v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~ 509 (750)
+|+++.|||||+|.|+-.-+++.|.+|.+ .+++...+....-..+.|-.++|+..+++.+....
T Consensus 299 vdtliLDKTGTIT~GnR~A~~f~p~~gv~----------------~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~ 362 (681)
T COG2216 299 VDTLLLDKTGTITLGNRQASEFIPVPGVS----------------EEELADAAQLASLADETPEGRSIVELAKKLGIELR 362 (681)
T ss_pred ccEEEecccCceeecchhhhheecCCCCC----------------HHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCC
Confidence 99999999999999999999999988875 67776666666666788999999999876543221
Q ss_pred --cc---cceeeecCC-eEEEEEeCeeeccCCCceeeeccCchHHHhhhccC-----hhHHHHHHHHhcccCCCCcEEEE
Q 004479 510 --SI---DRFEYFPGR-GLTATVNGIESGTEGGKELKASLGSVDFITSLCKS-----EDESRKIKEAVNGSSYGRGFVHA 578 (750)
Q Consensus 510 --~~---~~~~~~~g~-g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~ 578 (750)
.. .+|-.++.+ +++++ + . .++ ..+.||+.+.+.+...+ ..+.+...+... ..|.+...+
T Consensus 363 ~~~~~~~~~fvpFtA~TRmSGv-d---~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs--~~GGTPL~V 432 (681)
T COG2216 363 EDDLQSHAEFVPFTAQTRMSGV-D---L--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVS--RLGGTPLVV 432 (681)
T ss_pred cccccccceeeecceecccccc-c---C--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHH--hcCCCceEE
Confidence 11 123222232 33322 1 1 122 45789999988765442 122222222222 234444443
Q ss_pred eeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC
Q 004479 579 ALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 579 ~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g 658 (750)
. .+++.+|++.++|-+||+.+|-+++||+ .|+|++|+||||+.||.+||++.|+|++.|+++||||.++|++-|.+ |
T Consensus 433 ~-~~~~~~GVI~LkDivK~Gi~ERf~elR~-MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAeatPEdK~~~I~~eQ~~-g 509 (681)
T COG2216 433 V-ENGRILGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAE-G 509 (681)
T ss_pred E-ECCEEEEEEEehhhcchhHHHHHHHHHh-cCCeEEEEeCCCHHHHHHHHHHhCchhhhhcCChHHHHHHHHHHHhc-C
Confidence 3 3466799999999999999999999999 59999999999999999999999999999999999999999999998 9
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTT 718 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~ 718 (750)
+-|+|+|||+||||||++||||+||.+ ||.+|+|++.+|=+|.|..++.+.+.+|++..
T Consensus 510 rlVAMtGDGTNDAPALAqAdVg~AMNs-GTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 510 RLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred cEEEEcCCCCCcchhhhhcchhhhhcc-ccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999986 89999999999999999999999999999875
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=587.88 Aligned_cols=548 Identities=20% Similarity=0.226 Sum_probs=399.7
Q ss_pred CCCCChHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCc
Q 004479 163 GGKVNIHVLMAFAAFASIFMGNS-LEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLA 241 (750)
Q Consensus 163 ~~~~~~~~L~~la~~~a~~~g~~-~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~ 241 (750)
+..+|...+..+-.++-|....| +.+..|+++...+..+..|..+++...++++.+. +..++|+|+| .
T Consensus 191 ~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g----------~ 259 (1140)
T KOG0208|consen 191 KEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDG----------F 259 (1140)
T ss_pred HhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECC----------E
Confidence 34455555555444444444444 4455555555566777788888888888888764 4678999987 8
Q ss_pred EEEEecCCcCCCCEEEEcC-CCccccCcEEEeceeeeeeccccCCcceEeeccC-------------------CccCCCc
Q 004479 242 YRSVPVHDVEVGSYILVGA-GEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVG-------------------DRIPGGA 301 (750)
Q Consensus 242 ~~~V~~~~l~~GDiI~v~~-Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g-------------------~~v~aGt 301 (750)
+++|.++||+|||++.+.+ |-..|||++|++|+|.||||+|||||+|+.|.|- +.+|.||
T Consensus 260 ~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT 339 (1140)
T KOG0208|consen 260 WETVDSSELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGT 339 (1140)
T ss_pred EEEEeccccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccc
Confidence 9999999999999999998 9999999999999999999999999999999873 3478899
Q ss_pred eec------ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc
Q 004479 302 RNL------DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT 375 (750)
Q Consensus 302 ~~~------~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~ 375 (750)
.++ .+...+.|++||..|+-|++++.+-.+.....++-|..-+ |...+..+|++.++...+.+. . ..
T Consensus 340 ~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~----fi~~l~~ia~~gfiy~~i~l~--~-~g 412 (1140)
T KOG0208|consen 340 KVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFK----FILFLVIIALIGFIYTAIVLN--L-LG 412 (1140)
T ss_pred eEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHH----HHHHHHHHHHHHHHHHhHhHH--H-cC
Confidence 876 5789999999999999999999887766544333333333 222323333333222211111 1 12
Q ss_pred chhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEec
Q 004479 376 SVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPI 454 (750)
Q Consensus 376 ~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~ 454 (750)
......+.+++.++.+.+|.|||.+ +++...+.+|+.|+||.|-+++.+...|++|++|||||||||++.+.+..+.+.
T Consensus 413 ~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~ 492 (1140)
T KOG0208|consen 413 VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPV 492 (1140)
T ss_pred CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEec
Confidence 2456689999999999999999987 999999999999999999999999999999999999999999999999999875
Q ss_pred CCcccccCCc------c-------ccccCCCccHHHHHHHHHHH---hc----CCCCchHHHHHhhh-----c-------
Q 004479 455 YGHWIRSKKT------H-------DISCCIPNCEKEALAVAAAM---EK----GTTHPIGRAVVDHS-----I------- 502 (750)
Q Consensus 455 ~~~~~~~~~~------~-------~~~~~~~~~~~~~l~~~a~~---e~----~s~hP~~~Ai~~~~-----~------- 502 (750)
.+........ . ....+.. ....+..-.+.+ .. ...+|++.-..+.. +
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~ 571 (1140)
T KOG0208|consen 493 ERNVDDGPELKVVTEDSLQLFYKLSLRSSSL-PMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEA 571 (1140)
T ss_pred cccccccchhhhhhhhhccceeeccccccCC-chHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchh
Confidence 4321111000 0 0000000 001111111111 11 11234443222211 0
Q ss_pred -----------------------CCCC-CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH
Q 004479 503 -----------------------GKDL-PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE 558 (750)
Q Consensus 503 -----------------------~~~~-~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~ 558 (750)
+.+. ....+..|++.+...+|+++.... ++++.+.|+|||||.|.+.|+.+..
T Consensus 572 ~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~---~e~~~~~ftKGaPE~I~~ic~p~tv 648 (1140)
T KOG0208|consen 572 TREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTG---GEDKMMVFTKGAPESIAEICKPETV 648 (1140)
T ss_pred hhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecC---CCCceEeeccCCHHHHHHhcCcccC
Confidence 0000 122345677877777777765432 4688999999999999999997632
Q ss_pred HHHHHHHhc-ccCCCCcEEEEee--------------------ccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEe
Q 004479 559 SRKIKEAVN-GSSYGRGFVHAAL--------------------SVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMML 617 (750)
Q Consensus 559 ~~~~~~~~~-~~~~g~~~~~~~~--------------------~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~ml 617 (750)
.....+..+ ....|.+++..+- ++-+.+|++.|++++|++++.+|++|.+ |+||++|+
T Consensus 649 P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~-AnIRtVMc 727 (1140)
T KOG0208|consen 649 PADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNR-ANIRTVMC 727 (1140)
T ss_pred CccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHh-hcceEEEE
Confidence 222222221 1233445544321 1122499999999999999999999999 89999999
Q ss_pred cCCCHHHHHHHHHHcCCce-------------------------------------------------------------
Q 004479 618 TGDHESSAQRVANAVGINE------------------------------------------------------------- 636 (750)
Q Consensus 618 TGD~~~tA~~iA~~~GI~~------------------------------------------------------------- 636 (750)
||||..||..|||+|||.+
T Consensus 728 TGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~ 807 (1140)
T KOG0208|consen 728 TGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAM 807 (1140)
T ss_pred cCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEe
Confidence 9999999999999999952
Q ss_pred ------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHH
Q 004479 637 ------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAI 692 (750)
Q Consensus 637 ------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~ 692 (750)
|||||+|+||.++|++||+. |++|+|||||.||+.|||+|||||+++. ..|.
T Consensus 808 sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEAS 883 (1140)
T KOG0208|consen 808 SGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEAS 883 (1140)
T ss_pred cCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHh
Confidence 99999999999999999998 9999999999999999999999999986 3467
Q ss_pred hhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 693 AVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 693 ~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
-+|.+.---.+++.++++|++||..+-.-...++|...|.++..+
T Consensus 884 vAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFi 928 (1140)
T KOG0208|consen 884 VAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFI 928 (1140)
T ss_pred hcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 789999888899999999999999988888888777777665544
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-67 Score=561.84 Aligned_cols=505 Identities=21% Similarity=0.249 Sum_probs=395.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCc
Q 004479 184 NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEA 263 (750)
Q Consensus 184 ~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~ 263 (750)
+|.+...|..++.+...+....++.+-+...+|++....++.|+||| +|.++++.+|+||||+.++.|++
T Consensus 96 DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDG----------kw~E~eAs~lVPGDIlsik~GdI 165 (942)
T KOG0205|consen 96 DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDG----------KWSEQEASILVPGDILSIKLGDI 165 (942)
T ss_pred chhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecC----------eeeeeeccccccCceeeeccCCE
Confidence 46665555555555544444555666667778888777889999998 99999999999999999999999
Q ss_pred cccCcEEEecee-eeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHH
Q 004479 264 VPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWL 342 (750)
Q Consensus 264 VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~ 342 (750)
|||||++++|.- .||+|.|||||.||.|.+||++|+||.+.+|.+.++|++||..|..||-..++.. ..+...+|+.+
T Consensus 166 iPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVL 244 (942)
T KOG0205|consen 166 IPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVL 244 (942)
T ss_pred ecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHH
Confidence 999999999986 8999999999999999999999999999999999999999999999999999988 55668899999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhh-hhhhhhhH-HHHHHHHHHHHHHcCccccC
Q 004479 343 DEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAA-SPCALAVA-PLAYATAISSCARKGILLKG 420 (750)
Q Consensus 343 ~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a-~P~aL~la-p~a~~~~~~~~~~~gilvk~ 420 (750)
+.+..+....+.+.-++..++ ..+.. . ...+.....+.++++. +|.|+|-+ ++.++.|..+++++|.++|.
T Consensus 245 t~IGn~ci~si~~g~lie~~v----my~~q--~-R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkr 317 (942)
T KOG0205|consen 245 TGIGNFCICSIALGMLIEITV----MYPIQ--H-RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (942)
T ss_pred HhhhhHHHHHHHHHHHHHHHh----hhhhh--h-hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHH
Confidence 999887654432222221111 11111 1 1122334455666665 99999875 88999999999999999999
Q ss_pred chHHHhhccccEEEEcCCCCCcCCceEEEE--EE-ecCCcccccCCccccccCCCccHHHHHHHHHHH-hcCCCCchHHH
Q 004479 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKA--IE-PIYGHWIRSKKTHDISCCIPNCEKEALAVAAAM-EKGTTHPIGRA 496 (750)
Q Consensus 421 ~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~--i~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~-e~~s~hP~~~A 496 (750)
..++|.|+.+|++|+|||||||.|+++|.+ +. ...|. ++++++-.|+.. .....+.+++|
T Consensus 318 mtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv----------------~~D~~~L~A~rAsr~en~DAID~A 381 (942)
T KOG0205|consen 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV----------------DKDDVLLTAARASRKENQDAIDAA 381 (942)
T ss_pred HHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC----------------ChHHHHHHHHHHhhhcChhhHHHH
Confidence 999999999999999999999999999987 31 12232 255555554433 33345788899
Q ss_pred HHhhhcCC-----CCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-HHHHHHHh-ccc
Q 004479 497 VVDHSIGK-----DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-SRKIKEAV-NGS 569 (750)
Q Consensus 497 i~~~~~~~-----~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~~~~~~~~-~~~ 569 (750)
++....+. ++...+..+|+.++ ++...++.. ++++.+...||+|+++++.|....+ .++..+.. +..
T Consensus 382 ~v~~L~dPKeara~ikevhF~PFnPV~-Krta~ty~d-----~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~A 455 (942)
T KOG0205|consen 382 IVGMLADPKEARAGIKEVHFLPFNPVD-KRTALTYID-----PDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFA 455 (942)
T ss_pred HHHhhcCHHHHhhCceEEeeccCCccc-cceEEEEEC-----CCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHH
Confidence 98876432 23333334444443 445555544 4788889999999999999986433 22222222 112
Q ss_pred CCCCcEEEEeecc---------C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--
Q 004479 570 SYGRGFVHAALSV---------N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-- 635 (750)
Q Consensus 570 ~~g~~~~~~~~~~---------~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-- 635 (750)
++|.+-..++... . +.+|++-+-||+|.+..++|++-.+ .|++|.|+|||....+...++++|+-
T Consensus 456 eRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~-lGv~VkmitgdqlaI~keTgrrlgmgtn 534 (942)
T KOG0205|consen 456 ERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTN 534 (942)
T ss_pred HhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHh-ccceeeeecchHHHHHHhhhhhhccccC
Confidence 3333322222111 1 1389999999999999999999988 69999999999999999999999983
Q ss_pred ----------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCC
Q 004479 636 ----------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRA 687 (750)
Q Consensus 636 ----------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~ 687 (750)
+=||.+.||+|.++|+.||++ |+.|+|+|||+||+|||+.||+||++.. +
T Consensus 535 mypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi~gmtgdgvndapaLKkAdigiava~-a 612 (942)
T KOG0205|consen 535 MYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHIVGMTGDGVNDAPALKKADIGIAVAD-A 612 (942)
T ss_pred cCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-CceecccCCCcccchhhcccccceeecc-c
Confidence 268999999999999999999 9999999999999999999999999986 8
Q ss_pred cHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 688 SATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSC 731 (750)
Q Consensus 688 s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~ 731 (750)
+|.|+.+||+||+.+.++.+..++..||.++++++..-.++++.
T Consensus 613 tdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 613 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred hhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehh
Confidence 99999999999999999999999999999999999987777654
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=602.75 Aligned_cols=535 Identities=15% Similarity=0.145 Sum_probs=389.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccC
Q 004479 188 GGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVD 267 (750)
Q Consensus 188 ~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaD 267 (750)
-++++++..+++++|+|.++|+++.++ ++.++|++++ ++++++++||+|||+|+|++||+||||
T Consensus 143 L~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~~~~----------~~~~i~~~~i~vGDiv~v~~ge~iPaD 206 (1178)
T PLN03190 143 LAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVLVDD----------QFQEKKWKDIRVGEIIKIQANDTLPCD 206 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEEECC----------eEEEEeHHHCCCCCEEEECCCCEeeee
Confidence 356677778899999999999988653 5789999876 789999999999999999999999999
Q ss_pred cEEEe-----ceeeeeeccccCCcceEeeccCCcc-------------------------CCCceecc------------
Q 004479 268 CEVYQ-----GTATITIEHLTGEVKPLEAKVGDRI-------------------------PGGARNLD------------ 305 (750)
Q Consensus 268 g~vl~-----G~~~Vdes~LTGEs~pv~k~~g~~v-------------------------~aGt~~~~------------ 305 (750)
|+|++ |.++||||+|||||.|+.|.+++.. |.|++..+
T Consensus 207 ~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~l 286 (1178)
T PLN03190 207 MVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNII 286 (1178)
T ss_pred EEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCcccee
Confidence 99998 8899999999999999999876321 12222221
Q ss_pred ---------eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhh-------
Q 004479 306 ---------GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK------- 369 (750)
Q Consensus 306 ---------G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~------- 369 (750)
..+.+.|+++|.||. ++.....+..+++++|+.++++..+++.+.++++++++++..++..
T Consensus 287 lRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~ 363 (1178)
T PLN03190 287 LRGCELKNTAWAIGVAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363 (1178)
T ss_pred eccceecCCceEEEEEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 268899999999998 3333344556789999999999988888777777776665433211
Q ss_pred ---hcccc------c-----chh-hh---HHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHc----------CccccC
Q 004479 370 ---WSFIG------T-----SVC-RG---SVYRALGLMVAASPCALAVA-PLAYATAISSCARK----------GILLKG 420 (750)
Q Consensus 370 ---~~~~~------~-----~~~-~~---~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~----------gilvk~ 420 (750)
|+... . ..+ .. .+...+.++-..+|.+|.+. .+........+.+. ++.+|+
T Consensus 364 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~ 443 (1178)
T PLN03190 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRA 443 (1178)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceecc
Confidence 11000 0 000 01 12223445557899999774 55553323333322 367999
Q ss_pred chHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCc-------------ccc--c-----------------
Q 004479 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT-------------HDI--S----------------- 468 (750)
Q Consensus 421 ~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~-------------~~~--~----------------- 468 (750)
.+..|+||+|++||+|||||||+|+|+++++.. +|..|..... ... .
T Consensus 444 snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i-~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1178)
T PLN03190 444 LNINEDLGQIKYVFSDKTGTLTENKMEFQCASI-WGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKS 522 (1178)
T ss_pred CcchhhhccceEEEEcCCCccccceEEEEEEEE-CCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhc
Confidence 999999999999999999999999999999964 2332221100 000 0
Q ss_pred cCCCcc---HHHHHHHHHHH--------h-----------cCCCCchHHHHHhhhcCCCC-------------------C
Q 004479 469 CCIPNC---EKEALAVAAAM--------E-----------KGTTHPIGRAVVDHSIGKDL-------------------P 507 (750)
Q Consensus 469 ~~~~~~---~~~~l~~~a~~--------e-----------~~s~hP~~~Ai~~~~~~~~~-------------------~ 507 (750)
...... ..+.+...+.+ + ..+.+|.+.|++.++...|+ .
T Consensus 523 ~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~ 602 (1178)
T PLN03190 523 GKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQR 602 (1178)
T ss_pred cccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceec
Confidence 000000 01222222211 1 12348999999999865543 1
Q ss_pred CccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh---hHHHHHHHHh-cccCCCCcEEEEeec--
Q 004479 508 SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE---DESRKIKEAV-NGSSYGRGFVHAALS-- 581 (750)
Q Consensus 508 ~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~-- 581 (750)
...+..++|.+.|++|+++... +++++++++|||++.|+++|... ...++..+.. +....|.+++.++..
T Consensus 603 ~~il~~~pF~S~rKrMSvIv~~----~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l 678 (1178)
T PLN03190 603 FNVLGLHEFDSDRKRMSVILGC----PDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678 (1178)
T ss_pred ceeEEEecccccccEEEEEEEc----CCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeC
Confidence 1123356777888888887542 25678899999999999999742 1122222221 122335444433210
Q ss_pred -----------------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH
Q 004479 582 -----------------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ 626 (750)
Q Consensus 582 -----------------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~ 626 (750)
+-..+|+++++|++|++++++|++|++ +|+++||+|||+++||.
T Consensus 679 ~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi 757 (1178)
T PLN03190 679 NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRT-AGIKVWVLTGDKQETAI 757 (1178)
T ss_pred CHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHH
Confidence 011289999999999999999999999 89999999999999999
Q ss_pred HHHHHcCCc-----------------------------------------------------------------e-----
Q 004479 627 RVANAVGIN-----------------------------------------------------------------E----- 636 (750)
Q Consensus 627 ~iA~~~GI~-----------------------------------------------------------------~----- 636 (750)
+||++|||. +
T Consensus 758 ~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~ 837 (1178)
T PLN03190 758 SIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEE 837 (1178)
T ss_pred HHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHH
Confidence 999977661 0
Q ss_pred ------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCC
Q 004479 637 ------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNI 704 (750)
Q Consensus 637 ------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l 704 (750)
||||++|+||+++|+.+|+..+++|+|+|||+||+|||++|||||++.+.+..+|..+||+++ +.|
T Consensus 838 ~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI--~~F 915 (1178)
T PLN03190 838 QLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAM--GQF 915 (1178)
T ss_pred HHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccch--hhh
Confidence 699999999999999999874579999999999999999999999987666669999999999 789
Q ss_pred CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccccc
Q 004479 705 SGVPFCVA-KSRQTTSLVKQNVALALSCIILASLP-SVLGFLPLWLT 749 (750)
Q Consensus 705 ~~l~~~i~-~~R~~~~~i~~ni~~al~~~~~~~i~-~~~G~l~~~~a 749 (750)
+.|.+++. .||..|+++.+-+.|.+..|+++.++ +++++++.|.+
T Consensus 916 r~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg 962 (1178)
T PLN03190 916 RFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTL 962 (1178)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999987 69999999999999999999888777 67777766543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=474.96 Aligned_cols=478 Identities=20% Similarity=0.251 Sum_probs=343.4
Q ss_pred HHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEE
Q 004479 179 SIFMGN-SLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYIL 257 (750)
Q Consensus 179 a~~~g~-~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~ 257 (750)
-|.+.+ |+.+.+-++|+..-+.--.+++-|+...++.+ ...|.++.|.|++ +|+.+..+||.|||+|.
T Consensus 210 LWCLDeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v~R~k----------KW~~l~seeLlPgDvVS 278 (1160)
T KOG0209|consen 210 LWCLDEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINVYRNK----------KWVKLMSEELLPGDVVS 278 (1160)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEecC----------cceeccccccCCCceEE
Confidence 344444 45555555555444444456666666666655 3467788999987 89999999999999999
Q ss_pred EcC---CCccccCcEEEeceeeeeeccccCCcceEeecc-------------C----CccCCCceec-------------
Q 004479 258 VGA---GEAVPVDCEVYQGTATITIEHLTGEVKPLEAKV-------------G----DRIPGGARNL------------- 304 (750)
Q Consensus 258 v~~---Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~-------------g----~~v~aGt~~~------------- 304 (750)
|.. ...||||.+++.|+|.|||++|||||.|..|.+ + ..+|+||.++
T Consensus 279 I~r~~ed~~vPCDllLL~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~p 358 (1160)
T KOG0209|consen 279 IGRGAEDSHVPCDLLLLRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTP 358 (1160)
T ss_pred eccCcccCcCCceEEEEecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCC
Confidence 977 668999999999999999999999999999986 1 2478999876
Q ss_pred ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhh----h
Q 004479 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCR----G 380 (750)
Q Consensus 305 ~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~----~ 380 (750)
+|.+...|++||.+|..|++++.+--...+-+.-. .+.| +|..+.+++|++.+ .+.|.- +..+.. .
T Consensus 359 Dggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn--~Etf--~FILFLlVFAiaAa-----~Yvwv~-Gskd~~RsrYK 428 (1160)
T KOG0209|consen 359 DGGCVAYVLRTGFETSQGKLVRTILFSAERVTANN--RETF--IFILFLLVFAIAAA-----GYVWVE-GSKDPTRSRYK 428 (1160)
T ss_pred CCCeEEEEEeccccccCCceeeeEEecceeeeecc--HHHH--HHHHHHHHHHHHhh-----heEEEe-cccCcchhhhh
Confidence 78899999999999999999987655443333211 1222 23333333333321 222321 111221 2
Q ss_pred HHHHHHHHHHhhhhhhhhh-HHHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCccc
Q 004479 381 SVYRALGLMVAASPCALAV-APLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWI 459 (750)
Q Consensus 381 ~~~~al~vlv~a~P~aL~l-ap~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~ 459 (750)
-+.-...++...+|.-||+ .++|+-.++..++|.||+|..+-.+.-.|++|..|||||||||+..|.|.++.-......
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~ 508 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG 508 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc
Confidence 2344555666778999999 499999999999999999999999999999999999999999999999999853221110
Q ss_pred ccCCccccccCCCccHHHHHHHHHHH---h-cCCCCchHHHHHhhhcC----CC---------CCCccccceeeecCCeE
Q 004479 460 RSKKTHDISCCIPNCEKEALAVAAAM---E-KGTTHPIGRAVVDHSIG----KD---------LPSVSIDRFEYFPGRGL 522 (750)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~l~~~a~~---e-~~s~hP~~~Ai~~~~~~----~~---------~~~~~~~~~~~~~g~g~ 522 (750)
...+.++. +...-.+|+-+.++ | .-..+|+++|.+++... .+ .+...+..|.+.+..++
T Consensus 509 ~~~~~s~~----p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKR 584 (1160)
T KOG0209|consen 509 ALTPASKA----PNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKR 584 (1160)
T ss_pred cccchhhC----CchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHH
Confidence 00001000 00112233333332 3 34579999999987621 11 12233567888888888
Q ss_pred EEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-HHHHHHHhcccCCCCcEEEEeec--------------------
Q 004479 523 TATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-SRKIKEAVNGSSYGRGFVHAALS-------------------- 581 (750)
Q Consensus 523 ~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~-------------------- 581 (750)
|+++.+.+..-++.+++...||+||.+.++....+. .+++.... ..+|.++......
T Consensus 585 msvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~y--tR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEs 662 (1160)
T KOG0209|consen 585 MSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRY--TRQGSRVLALGYKPLGDMMVSQVRDLKREDVES 662 (1160)
T ss_pred HHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHH--hhccceEEEEecccccccchhhhhhhhhhhhhh
Confidence 888877665445567889999999999887654322 22222111 1234444332211
Q ss_pred cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------
Q 004479 582 VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------- 636 (750)
Q Consensus 582 ~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------- 636 (750)
+-.+.|++.|.-|+|+|++++|++|++ ...+++|+||||+.||.+||+++||.+
T Consensus 663 dLtFaGFlif~CPlK~Ds~~~I~el~~-SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t 741 (1160)
T KOG0209|consen 663 DLTFAGFLIFSCPLKPDSKKTIKELNN-SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGT 741 (1160)
T ss_pred cceeeeeEEEeCCCCccHHHHHHHHhc-cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCc
Confidence 111389999999999999999999998 799999999999999999999999942
Q ss_pred --------------------------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHH
Q 004479 637 --------------------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAP 672 (750)
Q Consensus 637 --------------------------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDap 672 (750)
||||+.|.||..++..|++. |+.++|||||+||+.
T Consensus 742 ~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVG 820 (1160)
T KOG0209|consen 742 IVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVG 820 (1160)
T ss_pred eeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchh
Confidence 99999999999999999998 999999999999999
Q ss_pred HHHhCCccEEeCC
Q 004479 673 ALAAATVGIVLAQ 685 (750)
Q Consensus 673 AL~~AdVGIamg~ 685 (750)
|||+||||||+-.
T Consensus 821 ALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 821 ALKQAHVGVALLN 833 (1160)
T ss_pred hhhhcccceehhc
Confidence 9999999999754
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=442.40 Aligned_cols=505 Identities=21% Similarity=0.209 Sum_probs=359.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCc
Q 004479 184 NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEA 263 (750)
Q Consensus 184 ~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~ 263 (750)
+|...++++.+....++++++.+++.++..+ .+...++..+ .....|+++|++||+|.+..+++
T Consensus 131 y~~pl~fvl~itl~keavdd~~r~~rd~~~N------se~y~~ltr~----------~~~~~~Ss~i~vGDvi~v~K~~R 194 (1051)
T KOG0210|consen 131 YWGPLGFVLTITLIKEAVDDLKRRRRDRELN------SEKYTKLTRD----------GTRREPSSDIKVGDVIIVHKDER 194 (1051)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------hhhheeeccC----------CcccccccccccccEEEEecCCc
Confidence 3445567777788889999999888776544 3333444222 23344999999999999999999
Q ss_pred cccCcEEE-----eceeeeeeccccCCcceEeecc---------------------------------------------
Q 004479 264 VPVDCEVY-----QGTATITIEHLTGEVKPLEAKV--------------------------------------------- 293 (750)
Q Consensus 264 VPaDg~vl-----~G~~~Vdes~LTGEs~pv~k~~--------------------------------------------- 293 (750)
||||.+++ +|++.+-+..|+||+..+.|-|
T Consensus 195 VPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~L 274 (1051)
T KOG0210|consen 195 VPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESL 274 (1051)
T ss_pred CCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcc
Confidence 99999999 5789999999999998877632
Q ss_pred --CCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhc
Q 004479 294 --GDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWS 371 (750)
Q Consensus 294 --g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~ 371 (750)
.+.++++|++.+|.+...|.++|.||+- +.....++.+-..++..++.+.+++...+++++++...+-.+-
T Consensus 275 sventLWanTVvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~---- 347 (1051)
T KOG0210|consen 275 SVENTLWANTVVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG---- 347 (1051)
T ss_pred cccceeeeeeeEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----
Confidence 1347889999999999999999999872 2222234444456788889999988888888877764332221
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhhhh----HHHHHHHHHHHHH-HcCccccCchHHHhhccccEEEEcCCCCCcCCce
Q 004479 372 FIGTSVCRGSVYRALGLMVAASPCALAV----APLAYATAISSCA-RKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 446 (750)
Q Consensus 372 ~~~~~~~~~~~~~al~vlv~a~P~aL~l----ap~a~~~~~~~~~-~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~ 446 (750)
+.|...++|++.++...+|..|-+ +.+.+.--+++-. -.|.++|+...-|+||++.++.+|||||||+|+|
T Consensus 348 ----~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM 423 (1051)
T KOG0210|consen 348 ----SDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEM 423 (1051)
T ss_pred ----CchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchh
Confidence 234556889999999999999854 2222332333222 2578999999999999999999999999999999
Q ss_pred EEEEEEecCCcccccCC-----------cc----c----cc---cCCCcc-HHHH--HHHHHHH----h------cCCCC
Q 004479 447 MFKAIEPIYGHWIRSKK-----------TH----D----IS---CCIPNC-EKEA--LAVAAAM----E------KGTTH 491 (750)
Q Consensus 447 ~v~~i~~~~~~~~~~~~-----------~~----~----~~---~~~~~~-~~~~--l~~~a~~----e------~~s~h 491 (750)
++++++.. ...+..+. +. . .. ...+.. .+.+ |+++... | .+..+
T Consensus 424 ~~KKiHLG-Tv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaS 502 (1051)
T KOG0210|consen 424 EFKKIHLG-TVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAAS 502 (1051)
T ss_pred eeeeeeee-eeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCC
Confidence 99999742 11111000 00 0 00 000000 1112 2222211 1 23446
Q ss_pred chHHHHHhhhcCCCC--------------------CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhh
Q 004479 492 PIGRAVVDHSIGKDL--------------------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITS 551 (750)
Q Consensus 492 P~~~Ai~~~~~~~~~--------------------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~ 551 (750)
|.+-||+++-+..|+ ......-|++.+..++|+.+...+ ..+++..|.||++-.|..
T Consensus 503 PDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e---~~~evtfylKGAD~VMs~ 579 (1051)
T KOG0210|consen 503 PDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDE---TTEEVTFYLKGADVVMSG 579 (1051)
T ss_pred CCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecC---CCceEEEEEecchHHHhc
Confidence 999999988643221 111223466667777788776543 257888899999887765
Q ss_pred hccChhHHHHHHHHhcccCCCCcEEEEe-------------------------------------ec-cCceEEEEEecC
Q 004479 552 LCKSEDESRKIKEAVNGSSYGRGFVHAA-------------------------------------LS-VNEKVTLIHLED 593 (750)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------------------------~~-~~~~lG~i~~~D 593 (750)
.....+..++.. .+..-.|.+...++ +. +-+.+|+.++||
T Consensus 580 iVq~NdWleEE~--gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 580 IVQYNDWLEEEC--GNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred ccccchhhhhhh--hhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 443322111000 00001122211111 00 112389999999
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
+++++++.+++.||+ ||+++||||||+.+||+.||+..++..
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~ 736 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGE 736 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCc
Confidence 999999999999999 899999999999999999999999852
Q ss_pred -----------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHh
Q 004479 637 -----------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIA 693 (750)
Q Consensus 637 -----------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~ 693 (750)
|+||++|+||+++++.+|++.|++|+.+|||.||..|+++||+||++-+++..+|.-
T Consensus 737 Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL 816 (1051)
T KOG0210|consen 737 SLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL 816 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccch
Confidence 899999999999999999987999999999999999999999999988888899999
Q ss_pred hcCEEEecCCCCCHHHHHHH-HHHHHHHHHHH
Q 004479 694 VADVLLLRNNISGVPFCVAK-SRQTTSLVKQN 724 (750)
Q Consensus 694 aADivL~~~~l~~l~~~i~~-~R~~~~~i~~n 724 (750)
+||+.+ ..|+.+.+++.+ ||..|++--+-
T Consensus 817 AADfSI--tqF~Hv~rLLl~HGR~SYkrsa~l 846 (1051)
T KOG0210|consen 817 AADFSI--TQFSHVSRLLLWHGRNSYKRSAKL 846 (1051)
T ss_pred hccccH--HHHHHHHHHhhccccchHHHHHHH
Confidence 999999 579999999886 99888765443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=456.09 Aligned_cols=532 Identities=17% Similarity=0.202 Sum_probs=379.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 190 LLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 190 ~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++....+.+.+|+|.++++++.++ ..+++|.++++ .+++..|++|++||+|.+..++.+|||.+
T Consensus 89 ~vl~~t~iKd~~eD~rR~~~D~~iN------~~~~~v~~~~~---------~~~~~~wk~~~vGd~v~v~~~~~~paD~l 153 (1151)
T KOG0206|consen 89 FVLGITAIKDAIEDYRRHKQDKEVN------NRKVEVLRGDG---------CFVEKKWKDVRVGDIVRVEKDEFVPADLL 153 (1151)
T ss_pred eeehHHHHHHHHhhhhhhhccHHhh------cceeEEecCCc---------eeeeeccceeeeeeEEEeccCCccccceE
Confidence 4556667889999999999988765 45678887642 48899999999999999999999999999
Q ss_pred EEe-----ceeeeeeccccCCcceEeeccC-----------------------------------------------Ccc
Q 004479 270 VYQ-----GTATITIEHLTGEVKPLEAKVG-----------------------------------------------DRI 297 (750)
Q Consensus 270 vl~-----G~~~Vdes~LTGEs~pv~k~~g-----------------------------------------------~~v 297 (750)
+++ |.|+|++++|+||+..+.|+.- ..+
T Consensus 154 lLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~L 233 (1151)
T KOG0206|consen 154 LLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLL 233 (1151)
T ss_pred EecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcc
Confidence 994 5689999999999999888630 012
Q ss_pred CCCceecc-eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhh-------
Q 004479 298 PGGARNLD-GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK------- 369 (750)
Q Consensus 298 ~aGt~~~~-G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~------- 369 (750)
+-|+...+ -.+...|+.+|.+|.+ ++....+..++++++|..+++...++.+++.++++.++...++..
T Consensus 234 lrg~~lrNT~~v~G~vv~tG~dtK~---~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 310 (1151)
T KOG0206|consen 234 LRGSRLRNTEWVYGVVVFTGHDTKL---MQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG 310 (1151)
T ss_pred cCCceeccCcEEEEEEEEcCCcchH---HHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC
Confidence 22444443 3577889999999985 445556888899999999999888888888887777665433322
Q ss_pred -hcccccch----hhhHHHHHHHHHHhhhhhhhhhH-H---HHHHHHHH---HHH----HcCccccCchHHHhhccccEE
Q 004479 370 -WSFIGTSV----CRGSVYRALGLMVAASPCALAVA-P---LAYATAIS---SCA----RKGILLKGGQVLDALASCHTI 433 (750)
Q Consensus 370 -~~~~~~~~----~~~~~~~al~vlv~a~P~aL~la-p---~a~~~~~~---~~~----~~gilvk~~~~lE~lg~v~~i 433 (750)
|++..... ....+..++.++...+|..|.+. - .....-+. .|. .....+|+.+..|.||++++|
T Consensus 311 ~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yI 390 (1151)
T KOG0206|consen 311 EWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYI 390 (1151)
T ss_pred chhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEE
Confidence 11221111 11234445556666788888542 2 11111111 222 357789999999999999999
Q ss_pred EEcCCCCCcCCceEEEEEEecCCcccccCCc------------------------cccc------c--CCCccHHHHHHH
Q 004479 434 AFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT------------------------HDIS------C--CIPNCEKEALAV 481 (750)
Q Consensus 434 ~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~------------------------~~~~------~--~~~~~~~~~l~~ 481 (750)
+.|||||||+|.|++.++.. +|..|..... .+.. . ....+..+....
T Consensus 391 fSDKTGTLT~N~M~F~kCsi-~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~ 469 (1151)
T KOG0206|consen 391 FSDKTGTLTQNSMEFKKCSI-NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRA 469 (1151)
T ss_pred EEcCcCccccceeeeecccc-cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhH
Confidence 99999999999999999964 3433322110 0000 0 011111122222
Q ss_pred HHH--------------HhcCCCCchHHHHHhhhcCCCCCCcc-------------------ccceeeecCCeEEEEEeC
Q 004479 482 AAA--------------MEKGTTHPIGRAVVDHSIGKDLPSVS-------------------IDRFEYFPGRGLTATVNG 528 (750)
Q Consensus 482 ~a~--------------~e~~s~hP~~~Ai~~~~~~~~~~~~~-------------------~~~~~~~~g~g~~~~v~~ 528 (750)
.+. +...+..|.+.|++..+++.++.... ..-.++.+.|++|+++..
T Consensus 470 la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR 549 (1151)
T KOG0206|consen 470 LALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVR 549 (1151)
T ss_pred HhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEE
Confidence 221 12235689999999998654431110 111234556777777655
Q ss_pred eeeccCCCceeeeccCchHHHhhhccChhH--HHH-HHHHhcccCCCCcEEEEee----------------------c--
Q 004479 529 IESGTEGGKELKASLGSVDFITSLCKSEDE--SRK-IKEAVNGSSYGRGFVHAAL----------------------S-- 581 (750)
Q Consensus 529 ~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~----------------------~-- 581 (750)
. +++++.+|+||++..|.+++..... .++ ..+.......|.+..+++. .
T Consensus 550 ~----p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~R 625 (1151)
T KOG0206|consen 550 D----PDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDR 625 (1151)
T ss_pred c----CCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCH
Confidence 3 3679999999999999998874211 010 0111111122222211110 0
Q ss_pred ----------cC---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------
Q 004479 582 ----------VN---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------ 636 (750)
Q Consensus 582 ----------~~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------ 636 (750)
.+ ..+|..++||+++++++++|+.|++ ||||+||||||+.+||.+||..|++.+
T Consensus 626 e~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~-AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~ 704 (1151)
T KOG0206|consen 626 EELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQ-AGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTET 704 (1151)
T ss_pred HHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHH-cCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCC
Confidence 01 1289999999999999999999999 899999999999999999999998731
Q ss_pred --------------------------------------------------------------------EEecCCHhhHHH
Q 004479 637 --------------------------------------------------------------------VYCSLKPEDKLN 648 (750)
Q Consensus 637 --------------------------------------------------------------------v~a~~~P~~K~~ 648 (750)
++||++|.||+.
T Consensus 705 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~ 784 (1151)
T KOG0206|consen 705 SEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKAL 784 (1151)
T ss_pred hhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHH
Confidence 899999999999
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH-HHHHHHHHHHHHHHH
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA-KSRQTTSLVKQNVAL 727 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~ni~~ 727 (750)
+|+..++..+..++.||||.||.+|+++|||||++++.+..+|..+||+.+ ..|+-+.+++. .||..|.++.+.+.+
T Consensus 785 Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLVHGhW~Y~R~a~~ily 862 (1151)
T KOG0206|consen 785 VVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLVHGHWSYIRLAKMILY 862 (1151)
T ss_pred HHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhheeecceeHHHHHHHHHH
Confidence 999998766899999999999999999999999999999999999999999 56777777655 599999999999999
Q ss_pred HHHHHHHHHHH-HHhhccccc
Q 004479 728 ALSCIILASLP-SVLGFLPLW 747 (750)
Q Consensus 728 al~~~~~~~i~-~~~G~l~~~ 747 (750)
.+..|+.+.+. +++.+.+.+
T Consensus 863 fFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 863 FFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred HHHHHHHHHHHHHHhhhcCCC
Confidence 99998877655 566655543
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=301.43 Aligned_cols=220 Identities=27% Similarity=0.421 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 191 LLAMFNLAHIAEEFFTSRAMVDVKELKENYPDS-VLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 191 i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~-~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++++.++.+++.+.++|+++.++++.+..+++ ++|+|++ ++++++++||+|||+|.+++||++||||+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~----------~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ 71 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDG----------RWQKIPSSELVPGDIIILKAGDIVPADGI 71 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETT----------EEEEEEGGGT-TTSEEEEETTEBESSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecc----------ccccchHhhccceeeeecccccccccCcc
Confidence 566777888899999999999999999988887 8899987 89999999999999999999999999999
Q ss_pred EEe-ceeeeeeccccCCcceEeec-----cCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHH
Q 004479 270 VYQ-GTATITIEHLTGEVKPLEAK-----VGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLD 343 (750)
Q Consensus 270 vl~-G~~~Vdes~LTGEs~pv~k~-----~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~ 343 (750)
|++ |.+.||||.+|||+.|+.|. +|+.+|+||.+.+|.+.++|+++|.+|..+++.+.+.+++.+++++++.++
T Consensus 72 ll~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 72 LLESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EEESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred ceeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999 99999999999999999999 999999999999999999999999999999999999999988899999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHhhhhhhhcc-cccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCc
Q 004479 344 EFGEQYSKVVVVLSLAIALIGPFLFKWSF-IGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGG 421 (750)
Q Consensus 344 ~~a~~~~~~vl~~a~~~~ii~~~~~~~~~-~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~ 421 (750)
++..++.+++++++++++++. .+ ....++...+..++++++.+|||+|+++ |+++..++.+++++|+++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIW------FFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------HTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred HHHHHHHhcccccchhhhccc------eecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 999999998887777664332 11 2234566789999999999999999997 999999999999999999999
Q ss_pred hHHHh
Q 004479 422 QVLDA 426 (750)
Q Consensus 422 ~~lE~ 426 (750)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=261.11 Aligned_cols=209 Identities=40% Similarity=0.632 Sum_probs=164.3
Q ss_pred ccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCc
Q 004479 430 CHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSV 509 (750)
Q Consensus 430 v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~ 509 (750)
|++||||||||||+|++.+ .+ .+....+.++...+..+.||++.+++.++...... .
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~-------------------~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~ 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP-------------------PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-K 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES-------------------CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEecCCCcccCeEEE---Ee-------------------ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-h
Confidence 6899999999999999998 11 12678889999999999999999999887542111 1
Q ss_pred cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEE
Q 004479 510 SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLI 589 (750)
Q Consensus 510 ~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i 589 (750)
.+.+|....++|..+.+.+. +. |+++++.+............... ...+...+..+. ....+|.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~-----------~~-g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~ 122 (215)
T PF00702_consen 58 SLESFSEFIGRGISGDVDGI-----------YL-GSPEWIHELGIRVISPDLVEEIQ--ESQGRTVIVLAV-NLIFLGLF 122 (215)
T ss_dssp CCEEEEEETTTEEEEEEHCH-----------EE-HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHCEEEEE-SHEEEEEE
T ss_pred hhhhheeeeecccccccccc-----------cc-ccchhhhhccccccccchhhhHH--HhhCCcccceee-cCeEEEEE
Confidence 16789999999999988762 23 88888876544321111111100 111222233221 34458999
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC--CHhhH--HHHHHHHHhhcCCeEEE
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL--KPEDK--LNHVKRTSRDMGGGLIM 663 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~--~P~~K--~~~V~~l~~~~g~~Vam 663 (750)
.+.|++||+++++|++|++ .|++++|+|||+..+|.++++++||.+ +|+++ +|++| .++++.|+.+ ++.|+|
T Consensus 123 ~~~d~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~ 200 (215)
T PF00702_consen 123 GLRDPLRPGAKEALQELKE-AGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVK-PGEVAM 200 (215)
T ss_dssp EEEEEBHTTHHHHHHHHHH-TTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCT-GGGEEE
T ss_pred eecCcchhhhhhhhhhhhc-cCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcC-CCEEEE
Confidence 9999999999999999999 699999999999999999999999987 99999 99999 9999999966 569999
Q ss_pred EcCCccCHHHHHhCC
Q 004479 664 VGEGINDAPALAAAT 678 (750)
Q Consensus 664 vGDG~NDapAL~~Ad 678 (750)
||||+||++|+++||
T Consensus 201 vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 201 VGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSGGHHHHHHHSS
T ss_pred EccCHHHHHHHHhCc
Confidence 999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-16 Score=138.31 Aligned_cols=112 Identities=30% Similarity=0.432 Sum_probs=100.4
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEecCCHhhHHHHHHHHHhhcCCeEE
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCSLKPEDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~~~P~~K~~~V~~l~~~~g~~Va 662 (750)
..+.++-.-++=++++++|++|++ . +++++.|||...+-...|+-+||+ ++++..-|+.|.+++++|++. +++|.
T Consensus 21 v~~tiatgGklf~ev~e~iqeL~d-~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~-~~k~v 97 (152)
T COG4087 21 VLYTIATGGKLFSEVSETIQELHD-M-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVV 97 (152)
T ss_pred EEEEEccCcEEcHhhHHHHHHHHH-h-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCC-CcEEE
Confidence 366777778888999999999998 4 999999999999999999999996 699999999999999999988 89999
Q ss_pred EEcCCccCHHHHHhCCccEEeCC--CCcHHHHhhcCEEE
Q 004479 663 MVGEGINDAPALAAATVGIVLAQ--RASATAIAVADVLL 699 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIamg~--~~s~~A~~aADivL 699 (750)
|||||+||.+||++||+||..=+ +...-+.++||+++
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi 136 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh
Confidence 99999999999999999997432 23445679999998
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=116.04 Aligned_cols=116 Identities=17% Similarity=0.234 Sum_probs=96.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe--------c-------CCHhhHHHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC--------S-------LKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a--------~-------~~P~~K~~~V~~l~~~~g 658 (750)
+++|++.+.|+.||+ .+ ++.++||-....+..+++++|++++|+ + ..|++|...++.+++. |
T Consensus 68 ~l~pga~ell~~lk~-~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~-~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRE-RF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL-Y 144 (203)
T ss_pred CCCccHHHHHHHHHh-CC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh-C
Confidence 689999999999998 45 999999999999999999999998776 2 4578999999999876 7
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~ 714 (750)
..+.|+|||.||.||++.||+||++.. .+..++.||=.=.-.+.+.+..++..+
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~a--k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFHA--PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEecC--CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 789999999999999999999999985 455555554433335667777776665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.9e-10 Score=117.67 Aligned_cols=116 Identities=19% Similarity=0.364 Sum_probs=100.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
++.|++.+.++.|++ .|+++.++||.....+..+.+++|++.++++ +..+.|.+.++.+.++
T Consensus 181 ~l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~ 259 (322)
T PRK11133 181 PLMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE 259 (322)
T ss_pred CCChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence 588999999999999 6999999999999899999999999876652 2356899999998876
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
.| ..+.++|||.||.+|++.|++||||. +.+..++.||.++-..++..+..++.
T Consensus 260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~n--Akp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 260 YEIPLAQTVAIGDGANDLPMIKAAGLGIAYH--AKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCCChhhEEEEECCHHHHHHHHHCCCeEEeC--CCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 44 57999999999999999999999994 67888999999998888888877653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-09 Score=110.75 Aligned_cols=114 Identities=20% Similarity=0.368 Sum_probs=96.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
+++|++++.++.|++ .|+++.++||.....+..+.+.+|+..+|+. ..+..|..+++.+.++
T Consensus 85 ~~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 85 PLTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CcCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 589999999999999 5999999999999999999999999887752 1234488888877665
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
.| ..+.|+||+.||.+|++.|+++++++ +.+..++.||.+|.+++|..+..+
T Consensus 164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 164 EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 23 35889999999999999999999996 467788999999999988776543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.4e-08 Score=95.85 Aligned_cols=109 Identities=17% Similarity=0.268 Sum_probs=89.5
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeE
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGL 661 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~V 661 (750)
.++.+.+.|.. +|++|++ .|+++.++||+....+..+.+++|+..+|... ..|.+.++.+.++.| +.+
T Consensus 25 ~~~~~~~~~~~------~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~--~~k~~~~~~~~~~~~~~~~~~ 95 (154)
T TIGR01670 25 EIKAFNVRDGY------GIRCALK-SGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ--SNKLIAFSDILEKLALAPENV 95 (154)
T ss_pred EEEEEechhHH------HHHHHHH-CCCEEEEEECCCCHHHHHHHHHcCCCEEEecc--cchHHHHHHHHHHcCCCHHHE
Confidence 35555555442 8999999 59999999999999999999999999887765 456777777765423 579
Q ss_pred EEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
.|+||+.||.++++.|.+++++.. +.+..+..||+++..+.
T Consensus 96 ~~vGDs~~D~~~~~~ag~~~~v~~-~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 96 AYIGDDLIDWPVMEKVGLSVAVAD-AHPLLIPRADYVTRIAG 136 (154)
T ss_pred EEECCCHHHHHHHHHCCCeEecCC-cCHHHHHhCCEEecCCC
Confidence 999999999999999999999986 66788889999996554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.8e-08 Score=100.35 Aligned_cols=104 Identities=27% Similarity=0.417 Sum_probs=86.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----------------Eec-CCHhhHHHHHHHHHh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----------------YCS-LKPEDKLNHVKRTSR 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----------------~a~-~~P~~K~~~V~~l~~ 655 (750)
.+++|++.+.++.+|+ .|.+|+++||-...-+..+|+++|++.+ ... +..+.|.+.++++.+
T Consensus 76 ~~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 6899999999999999 6999999999999999999999999742 222 344789999988887
Q ss_pred hcCCe---EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEE
Q 004479 656 DMGGG---LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLL 699 (750)
Q Consensus 656 ~~g~~---VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL 699 (750)
..|.. +.++|||.||.|+|+.|+.+++++.. ..-...|+...
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~--~~l~~~a~~~~ 199 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK--PKLRALADVRI 199 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC--HHHHHHHHHhc
Confidence 54554 89999999999999999999999853 33444455544
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.3e-08 Score=94.00 Aligned_cols=101 Identities=14% Similarity=0.174 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
..|+.|++ .|+++.++|+.+...++.+.+.+|+..+|....| |.+.++.+.++.| ..++|+||+.||.++++.|
T Consensus 41 ~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~a 117 (169)
T TIGR02726 41 MGVIVLQL-CGIDVAIITSKKSGAVRHRAEELKIKRFHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRV 117 (169)
T ss_pred HHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCCCcEEEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHC
Confidence 57889999 6999999999999999999999999998887643 3444554444323 5699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEecCCCC
Q 004479 678 TVGIVLAQRASATAIAVADVLLLRNNIS 705 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~~~~l~ 705 (750)
+++++|+. +.+..++.||+|...++=.
T Consensus 118 g~~~am~n-A~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 118 GLAVAVGD-AVADVKEAAAYVTTARGGH 144 (169)
T ss_pred CCeEECcC-chHHHHHhCCEEcCCCCCC
Confidence 99999996 7788899999988654433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.6e-08 Score=97.42 Aligned_cols=112 Identities=20% Similarity=0.370 Sum_probs=89.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec---------------CCHhhHHHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------------LKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------------~~P~~K~~~V~~l~~~~g 658 (750)
++.|++.+.++.|++ . +++.++|+-....+..+.+++|+.++|+. ..|+.|...++.++.. +
T Consensus 68 ~~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~-~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSL-G 144 (205)
T ss_pred CCCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHh-C
Confidence 468999999999998 6 89999999999999999999999765432 2578899999988877 7
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCE-EEecCCCCCHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADV-LLLRNNISGVPFCV 711 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADi-vL~~~~l~~l~~~i 711 (750)
..+.|||||.||.++.+.|++|+..+. ..+...+.++. ++ +++..+...+
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFRP-PANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEECC-CHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999999999999999999875 33333445565 33 4555554443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.7e-08 Score=94.47 Aligned_cols=96 Identities=18% Similarity=0.279 Sum_probs=83.0
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
.+|+.|++ .|+++.++||.....+..+++++|+..+|.. .++|...++.+.++.| ..++||||+.||.++++.|
T Consensus 55 ~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~a 131 (183)
T PRK09484 55 YGIRCLLT-SGIEVAIITGRKSKLVEDRMTTLGITHLYQG--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKV 131 (183)
T ss_pred HHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCceeecC--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHC
Confidence 68999998 5999999999999999999999999988874 3568888877766534 4699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEe
Q 004479 678 TVGIVLAQRASATAIAVADVLLL 700 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~ 700 (750)
.++++++. +.+..+..||+++-
T Consensus 132 G~~~~v~~-~~~~~~~~a~~v~~ 153 (183)
T PRK09484 132 GLSVAVAD-AHPLLLPRADYVTR 153 (183)
T ss_pred CCeEecCC-hhHHHHHhCCEEec
Confidence 99999875 66778888999984
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=95.07 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=94.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
++.+++.++|++|++ .|+++++.||-+...+..++++++++.
T Consensus 18 ~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 18 MISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred ccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 488999999999999 699999999999999999999999851
Q ss_pred ----------------------------------------EEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCH
Q 004479 637 ----------------------------------------VYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDA 671 (750)
Q Consensus 637 ----------------------------------------v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDa 671 (750)
.+.+++| -+|...++.+.+..| ..++++||+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 1123233 367777777766433 3599999999999
Q ss_pred HHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 672 PALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 672 pAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
+|++.|+.|++|++ +.+..++.||++..+++=.++.++
T Consensus 177 ~ml~~ag~~vam~n-a~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 177 DLFRVVGFKVAVAN-ADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHHhCCCeEEcCC-ccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999996 889999999999977666666554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.1e-07 Score=93.23 Aligned_cols=101 Identities=23% Similarity=0.363 Sum_probs=82.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
+++|++.+.++.|++ .|+++.++|+-....+..+.+.+|+..+|+. ..|..|.+.++.+.++
T Consensus 80 ~~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~ 158 (201)
T TIGR01491 80 SLRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE 158 (201)
T ss_pred CCCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence 589999999999999 5999999999999999999999999876642 2345677787777654
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD 696 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD 696 (750)
.| +.+.|+||+.||.++++.|+++++++.. ......++|
T Consensus 159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~-~~~~~~a~~ 200 (201)
T TIGR01491 159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDE-GHADYLAKD 200 (201)
T ss_pred hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC-ccchhhccc
Confidence 22 3599999999999999999999999763 334555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.9e-07 Score=94.46 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=92.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------------------------------------
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-------------------------------------- 636 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 636 (750)
+.+.+.++|++|++ .|+++++.||-....+..+.+++|+..
T Consensus 21 i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 21 LSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred cCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 78999999999999 699999999999999999999999851
Q ss_pred -----------------------------------------------EEecCCHhh--HHHHHHHHHhhcC---CeEEEE
Q 004479 637 -----------------------------------------------VYCSLKPED--KLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 637 -----------------------------------------------v~a~~~P~~--K~~~V~~l~~~~g---~~Vamv 664 (750)
.+.+..|.. |..-++.+.+..| ..++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001122221 4444444444322 358999
Q ss_pred cCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 665 GEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 665 GDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
||+.||.+|++.|++|++|++ +.+..++.||++..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~N-a~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVAN-ADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEecC-ccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999996 88999999999998888888887764
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.5e-07 Score=94.59 Aligned_cols=117 Identities=21% Similarity=0.384 Sum_probs=96.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------------------------------------
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-------------------------------------- 636 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 636 (750)
+.+.++++|+++++ .|+++++.||-....+..+.+++|+..
T Consensus 21 i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 21 ISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred cCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 89999999999999 599999999999999999999999961
Q ss_pred -------------------------------------------------------------------------------E
Q 004479 637 -------------------------------------------------------------------------------V 637 (750)
Q Consensus 637 -------------------------------------------------------------------------------v 637 (750)
.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 0
Q ss_pred EecCCHh--hHHHHHHHHHhhcCCe---EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 638 YCSLKPE--DKLNHVKRTSRDMGGG---LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 638 ~a~~~P~--~K~~~V~~l~~~~g~~---VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+-+..|. +|..-++.+.+..|-. |+++||+.||.+||+.|+.|+|||. +.+.+++.||++...++=.++..+++
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N-a~~~~k~~A~~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN-ADEELKELADYVTTSNDEDGVAEALE 258 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC-CCHHHHhhCCcccCCccchHHHHHHH
Confidence 0122222 3555566666644544 9999999999999999999999997 69999999998888888888888776
Q ss_pred H
Q 004479 713 K 713 (750)
Q Consensus 713 ~ 713 (750)
.
T Consensus 259 ~ 259 (264)
T COG0561 259 K 259 (264)
T ss_pred H
Confidence 4
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.1e-07 Score=93.21 Aligned_cols=53 Identities=25% Similarity=0.391 Sum_probs=48.0
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
..|+++|||.||.+||+.|+.|+||++ +.+..++.||+|..+++=.++.++++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~N-A~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGN-AIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecC-ccHHHHHhcCeeccCCCcchHHHHHH
Confidence 469999999999999999999999996 89999999999998888888887774
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.4e-07 Score=90.71 Aligned_cols=113 Identities=20% Similarity=0.361 Sum_probs=86.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEec-------------------CCHhhHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCS-------------------LKPEDKLNHVKR 652 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~-------------------~~P~~K~~~V~~ 652 (750)
+++|++++.++.|++ .|+++.++||.....+..+.+.+|+. ++|+. ..+..|.+.++.
T Consensus 84 ~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 84 RLSPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 478999999999999 59999999999999999999999996 46642 112458888888
Q ss_pred HHhhcC-CeEEEEcCCccCHHHHHh--CCccEEeCCCC-cHHHHhhcCEEEecCCCCCHHH
Q 004479 653 TSRDMG-GGLIMVGEGINDAPALAA--ATVGIVLAQRA-SATAIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 653 l~~~~g-~~VamvGDG~NDapAL~~--AdVGIamg~~~-s~~A~~aADivL~~~~l~~l~~ 709 (750)
++++.| ..+.|+||+.||..|.++ ++++++.|... .+.....+|+++ +++..+..
T Consensus 163 ~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 163 IKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred HHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 876533 468999999999999777 57777766422 233345689988 45555544
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.9e-07 Score=89.04 Aligned_cols=91 Identities=21% Similarity=0.389 Sum_probs=77.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC-------------------CHhhHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL-------------------KPEDKLNHVKR 652 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~-------------------~P~~K~~~V~~ 652 (750)
++-|++++.+..|+++ |.++.++||--..-+..||.++||+. +||+. ....|.++++.
T Consensus 88 ~lT~Gi~eLv~~L~~~-~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHAR-GTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred ccCCCHHHHHHHHHHc-CCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 4679999999999995 99999999999999999999999985 66653 23569999999
Q ss_pred HHhh-cCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 653 TSRD-MGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 653 l~~~-~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
+++. .-+.++|||||.||.+|++.||-=|+.|+
T Consensus 167 lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 167 LRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGG 200 (227)
T ss_pred HHhCCChheeEEecCCccccccCCchhhhhccCC
Confidence 9874 23679999999999999999887777664
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=6e-07 Score=94.77 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=45.4
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCE--EEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADV--LLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADi--vL~~~~l~~l~~~i~ 712 (750)
..|+.+|||-||.+||+.|+.|+|||+ +.+.+++.||. +..+++=.++.++++
T Consensus 205 ~~v~afGD~~NDi~Ml~~ag~~vAm~N-a~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 205 ADCMAFGDAMNDREMLGSVGRGFIMGN-AMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred HHeEEecCCHHHHHHHHHcCCceeccC-ChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 469999999999999999999999996 88999999996 555667777777664
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.3e-06 Score=89.33 Aligned_cols=116 Identities=19% Similarity=0.275 Sum_probs=93.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
.+.+.+.++|++|++ .|+++++.||-+...+..+.+++|+..
T Consensus 15 ~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 15 AINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred ccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 477899999999999 699999999999999999999999631
Q ss_pred --------------------------------------E-------EecCCH--hhHHHHHHHHHhhcC---CeEEEEcC
Q 004479 637 --------------------------------------V-------YCSLKP--EDKLNHVKRTSRDMG---GGLIMVGE 666 (750)
Q Consensus 637 --------------------------------------v-------~a~~~P--~~K~~~V~~l~~~~g---~~VamvGD 666 (750)
+ +.+..| -.|..-++.+.++.| ..++++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0 112223 257777777765433 46999999
Q ss_pred CccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCC----HHHHH
Q 004479 667 GINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISG----VPFCV 711 (750)
Q Consensus 667 G~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~----l~~~i 711 (750)
+.||.+|++.|++|+||++ +.+..++.||.|..+++-.+ +...+
T Consensus 174 ~~NDi~m~~~ag~~vam~N-a~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVAN-AQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred CHhhHHHHHhcCceEEcCC-hhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 9999999999999999996 88899999999987777777 55544
|
catalyze the same reaction as SPP. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.2e-06 Score=91.97 Aligned_cols=53 Identities=25% Similarity=0.342 Sum_probs=44.9
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC--EEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD--VLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD--ivL~~~~l~~l~~~i~ 712 (750)
..|+++|||.||.+||+.|+.|+||++ +.+..++.|| .|..+++=.++.++++
T Consensus 207 ~~viafGD~~NDi~Ml~~ag~~vAm~N-A~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 207 KDCIAFGDGMNDAEMLSMAGKGCIMGN-AHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHeEEEcCCcccHHHHHHcCCCeeecC-CcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 459999999999999999999999996 8999999988 6666666667776664
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.1e-07 Score=88.23 Aligned_cols=77 Identities=29% Similarity=0.500 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC-------------CHh-h--HHHHHHHH-----
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL-------------KPE-D--KLNHVKRT----- 653 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~-------------~P~-~--K~~~V~~l----- 653 (750)
+++.+.|+.+++ .|++++++||+....++.+++.+|++. +++.- +|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence 788899999999 699999999999999999999999985 44432 222 3 99999999
Q ss_pred -HhhcCCeEEEEcCCccCHHHHH
Q 004479 654 -SRDMGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 654 -~~~~g~~VamvGDG~NDapAL~ 675 (750)
+.. ...+.++|||.||.|||+
T Consensus 171 ~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 EDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HTHT-CCEEEEEESSGGGHHHHH
T ss_pred cCCC-CCeEEEEECCHHHHHHhC
Confidence 233 688999999999999986
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.1e-06 Score=86.25 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=78.9
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec------------------CCHhhHHHHHHHH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS------------------LKPEDKLNHVKRT 653 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~------------------~~P~~K~~~V~~l 653 (750)
..+++|++.+.++.+++ .|++++++||-....+..+++.+|++++++. +.++.|.+.++++
T Consensus 85 ~~~~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~ 163 (202)
T TIGR01490 85 ESILYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAEL 163 (202)
T ss_pred HHhccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHH
Confidence 45789999999999999 5999999999999999999999999876643 2346788888887
Q ss_pred HhhcC---CeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 654 SRDMG---GGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 654 ~~~~g---~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
.++.+ ..+.++||+.||.|+++.|+.++++..
T Consensus 164 ~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 164 LAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 65423 268899999999999999999999874
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.6e-06 Score=87.88 Aligned_cols=53 Identities=23% Similarity=0.376 Sum_probs=47.4
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
..++++||+.||.+|++.|++|++||. +.+..++.||++..+++=.++.++++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vamgn-a~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAMGN-ADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEecC-chHHHHHhCCEEEecCCCCcHHHHHH
Confidence 359999999999999999999999996 67778999999998888888888775
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=2e-06 Score=87.45 Aligned_cols=90 Identities=14% Similarity=0.285 Sum_probs=75.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC-ceEEec-C----------CH------------hhHHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI-NEVYCS-L----------KP------------EDKLN 648 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI-~~v~a~-~----------~P------------~~K~~ 648 (750)
-+++|++.+.++.|++ .|+++.++||........+.+.++. ..+++. + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 5799999999999999 5999999999999999999988743 445441 1 13 35899
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeC
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg 684 (750)
+++.++.. ...+.|+|||.||.+|++.||+.++=+
T Consensus 148 ~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 99998876 678899999999999999999977754
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.5e-06 Score=85.08 Aligned_cols=83 Identities=28% Similarity=0.461 Sum_probs=70.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe-------------------cCCHhhHHHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC-------------------SLKPEDKLNHVKRTS 654 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a-------------------~~~P~~K~~~V~~l~ 654 (750)
+++|++.+.++.|++ .|++++++||.....++.+++.+|+..+++ ...+..|...++.++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 368999999999999 599999999999999999999999986554 134578999999877
Q ss_pred hhcC---CeEEEEcCCccCHHHHHhC
Q 004479 655 RDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 655 ~~~g---~~VamvGDG~NDapAL~~A 677 (750)
++.| ..+.|+|||.||.||++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6422 4689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.7e-06 Score=85.39 Aligned_cols=116 Identities=23% Similarity=0.377 Sum_probs=94.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------------------------------
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------ 636 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------ 636 (750)
..+.+++.+++++|++ .|+++++.||-....+..+.+++++..
T Consensus 14 ~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 14 GKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 4577999999999999 699999999999999999999999851
Q ss_pred --------------------------------------------------------------------------------
Q 004479 637 -------------------------------------------------------------------------------- 636 (750)
Q Consensus 637 -------------------------------------------------------------------------------- 636 (750)
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence
Q ss_pred ---EEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHH
Q 004479 637 ---VYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 637 ---v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~ 708 (750)
-+-+++| -.|..-++.+.+..| ..++++||+-||.+||+.++.|+||+. +++..++.||.+....+=.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~n-a~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGN-ATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETT-S-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcC-CCHHHHHhCCEEecCCCCChHH
Confidence 1223344 468888888876433 578999999999999999999999996 8899999999998765446665
Q ss_pred HH
Q 004479 709 FC 710 (750)
Q Consensus 709 ~~ 710 (750)
++
T Consensus 252 ~~ 253 (254)
T PF08282_consen 252 KA 253 (254)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.5e-06 Score=88.03 Aligned_cols=51 Identities=33% Similarity=0.485 Sum_probs=44.5
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
..++++||+.||.+|++.|+.|++|+. +.+..++.||++..+++=.++.++
T Consensus 205 ~~~~~~GD~~nD~~m~~~~~~~~a~~n-a~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 205 EDVIAFGDGMNDIEMLEAAGYGVAMGN-ADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred HHEEEeCCcHHhHHHHHhCCceeEecC-chHHHHHhCCEEecCCCCcchhhh
Confidence 469999999999999999999999985 788899999999987776666553
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.6e-06 Score=77.92 Aligned_cols=113 Identities=19% Similarity=0.305 Sum_probs=89.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
-.|+.|.+ +|+++-++||-+....+.=|+++||..+|-. -++|....+.|.++.+ .-|+++||-.||-|+|++.
T Consensus 42 ~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~v 118 (170)
T COG1778 42 HGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGIKHLYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKV 118 (170)
T ss_pred HHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCCceeeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHc
Confidence 35778888 7999999999999999999999999988876 4689999998887533 4699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEecCC----CCCHHHHHHHHHHH
Q 004479 678 TVGIVLAQRASATAIAVADVLLLRNN----ISGVPFCVAKSRQT 717 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~~~~----l~~l~~~i~~~R~~ 717 (750)
..+++... +-.--++.||+|+-... +..+.++|..++..
T Consensus 119 Gls~a~~d-Ah~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~ 161 (170)
T COG1778 119 GLSVAVAD-AHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGK 161 (170)
T ss_pred CCcccccc-cCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCc
Confidence 99999976 66677788898875432 33344444444433
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.9e-06 Score=93.22 Aligned_cols=52 Identities=31% Similarity=0.501 Sum_probs=47.2
Q ss_pred eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 660 GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
.|+++|||.||.+||+.|+.|||||+ +.+..++.||+|..+++=.++.++++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgN-A~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSN-GAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCC-CCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 58999999999999999999999996 89999999999988888888887765
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.6e-06 Score=81.33 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=73.2
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec---------------------CCH--hh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS---------------------LKP--ED 645 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~---------------------~~P--~~ 645 (750)
-+++|++.+.++.|++ .|+++.++|+.+......+.+..|+.. +++. ..| ..
T Consensus 71 ~~l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 4789999999999998 599999999999999999999999864 4431 111 24
Q ss_pred HHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 646 KLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 646 K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
|.++++.++++....+.|+|||.||..|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999876424789999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1e-05 Score=82.71 Aligned_cols=118 Identities=22% Similarity=0.338 Sum_probs=86.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec---------CCHhh--HHHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------LKPED--KLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------~~P~~--K~~~V~~l~~~~g~~V 661 (750)
.++.|++.+.++.|++ .|+++.++||........+.+..|+.+.|.. ..|+. -...++.++.. ...+
T Consensus 92 ~~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~ 169 (226)
T PRK13222 92 SRLYPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-PEEM 169 (226)
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-hhhe
Confidence 5688999999999999 5999999999999999999999999653321 22321 13334444333 4679
Q ss_pred EEEcCCccCHHHHHhCCc-cEEeCC--C-CcHHHHhhcCEEEecCCCCCHHHHHHHH
Q 004479 662 IMVGEGINDAPALAAATV-GIVLAQ--R-ASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 662 amvGDG~NDapAL~~AdV-GIamg~--~-~s~~A~~aADivL~~~~l~~l~~~i~~~ 714 (750)
.|+||+.||..+.+.|++ +|.+.. . ..+.....+|+++ +++..+...+..+
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 999999999999999988 555432 1 2344455788888 7888888776543
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.1e-05 Score=82.24 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=72.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEec---C--------C--H----------hhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCS---L--------K--P----------EDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~---~--------~--P----------~~K~~ 648 (750)
+++|++.+.++.|++ .|+++.++||-....+..+.+.+ +. .+++. . . | ..|..
T Consensus 74 ~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 74 EIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 689999999999999 59999999999999999999988 64 36543 1 1 1 24888
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
.++.++.. ...+.|+|||.||.+|.++||+.++
T Consensus 152 ~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 99888776 6789999999999999999999777
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.9e-05 Score=79.27 Aligned_cols=116 Identities=28% Similarity=0.369 Sum_probs=89.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----Ee-cCC------HhhHHHHHHHHHhhcCCe
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----YC-SLK------PEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~a-~~~------P~~K~~~V~~l~~~~g~~ 660 (750)
...+-|+++++++.|++ .|++..++|+++...+..+.+..|+... ++ +-. |+.....++.+... .+.
T Consensus 87 ~~~~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~~~ 164 (220)
T COG0546 87 ESRLFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-PEE 164 (220)
T ss_pred cCccCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-hhh
Confidence 45678999999999999 6999999999999999999999999753 33 323 33344444444333 346
Q ss_pred EEEEcCCccCHHHHHhCC---ccEEeCCC-CcHHHHhhcCEEEecCCCCCHHHHH
Q 004479 661 LIMVGEGINDAPALAAAT---VGIVLAQR-ASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 661 VamvGDG~NDapAL~~Ad---VGIamg~~-~s~~A~~aADivL~~~~l~~l~~~i 711 (750)
+.||||..||..|=++|+ ||+..|.. ........+|+++ +++..|...+
T Consensus 165 ~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 165 ALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred eEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 999999999999999998 77888753 4556677799999 6677766554
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=9.6e-05 Score=83.62 Aligned_cols=89 Identities=26% Similarity=0.330 Sum_probs=75.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC-ceEEe-----cCCHhhHHHHHHHHHhhcCCeEEEEcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI-NEVYC-----SLKPEDKLNHVKRTSRDMGGGLIMVGEG 667 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI-~~v~a-----~~~P~~K~~~V~~l~~~~g~~VamvGDG 667 (750)
|++|++.+.++++|+ .|+++.++|+-++..++.+++.+|+ +.+.+ ++.|+.|.+.+++...+ +.+.|+||.
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~~~~kg~~K~~~l~~~l~~--~~~~yvGDS 148 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDGTTNLKGAAKAAALVEAFGE--RGFDYAGNS 148 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCccccCCchHHHHHHHHhCc--cCeeEecCC
Confidence 588999999999999 5999999999999999999999997 66664 35778887766643322 236889999
Q ss_pred ccCHHHHHhCCccEEeCC
Q 004479 668 INDAPALAAATVGIVLAQ 685 (750)
Q Consensus 668 ~NDapAL~~AdVGIamg~ 685 (750)
.||.|+++.|+-.++++.
T Consensus 149 ~~Dlp~~~~A~~av~Vn~ 166 (479)
T PRK08238 149 AADLPVWAAARRAIVVGA 166 (479)
T ss_pred HHHHHHHHhCCCeEEECC
Confidence 999999999999999986
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.7e-05 Score=69.15 Aligned_cols=91 Identities=23% Similarity=0.396 Sum_probs=68.3
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC----ceEEe-----------------------cCC
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI----NEVYC-----------------------SLK 642 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI----~~v~a-----------------------~~~ 642 (750)
....++++++.+.+++|++ .|++++++||.....+..+.+++|+ ..+++ +-.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 3456899999999999999 5999999999999999999999998 33443 223
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHh-CCccEE
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA-ATVGIV 682 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~-AdVGIa 682 (750)
|+.+..+.+.+... ...+.|+||+.||..+++. ..-+|+
T Consensus 99 ~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 99 PDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceee
Confidence 33333444443333 4679999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00011 Score=74.05 Aligned_cols=114 Identities=24% Similarity=0.343 Sum_probs=80.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec--C-CHhhHHHHHHHHHhhc---CCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS--L-KPEDKLNHVKRTSRDM---GGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~--~-~P~~K~~~V~~l~~~~---g~~Vam 663 (750)
++.|++.+++++|++ .|+++.++|+.+...+..+-+..|+.+ +++. . .|.-|.+..+...++. ...+.|
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 678999999999999 599999999999999999999999954 3321 1 1122333333333221 356999
Q ss_pred EcCCccCHHHHHhCCccE---EeCC-CCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 664 VGEGINDAPALAAATVGI---VLAQ-RASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGI---amg~-~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
|||+.+|..+-+++++.. .-|. ...+...+.+|+++ +++..+..+
T Consensus 154 igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~ 202 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLAL 202 (205)
T ss_pred EcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHH
Confidence 999999999999998753 2332 12334566799987 555555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00019 Score=74.99 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=42.2
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCc---HHHHhh--c-CEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRAS---ATAIAV--A-DVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s---~~A~~a--A-DivL~~~~l~~l~~~i~ 712 (750)
..+.++||+.||.+||+.|+.|+||++ +. +..++. | ++|-.+++=.++.++++
T Consensus 195 ~~~~a~GD~~ND~~Ml~~ag~~vam~N-a~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 195 IKVVGLGDSPNDLPLLEVVDLAVVVPG-PNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred ceEEEEcCCHhhHHHHHHCCEEEEeCC-CCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 359999999999999999999999997 54 356665 4 47766777777777664
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00018 Score=73.01 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=79.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE----e-cCCHhhH--HHHHHHHHhhc---CCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY----C-SLKPEDK--LNHVKRTSRDM---GGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~----a-~~~P~~K--~~~V~~l~~~~---g~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+.....+..+-+..|+.+.| + +..+..| .+.++.+.++. ...+.|
T Consensus 82 ~~~~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 160 (214)
T PRK13288 82 TEYETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM 160 (214)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence 477999999999999 59999999999999999999999997643 2 1111112 22333333221 356899
Q ss_pred EcCCccCHHHHHhCCc---cEEeCCCCc-HHHHhhcCEEEecCCCCCHHHHH
Q 004479 664 VGEGINDAPALAAATV---GIVLAQRAS-ATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 664 vGDG~NDapAL~~AdV---GIamg~~~s-~~A~~aADivL~~~~l~~l~~~i 711 (750)
|||..+|..|-++|++ |+.-|.... +.....+|+++ +++..+...+
T Consensus 161 iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 161 VGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 9999999999999987 344443222 23344688887 5666666544
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00027 Score=74.54 Aligned_cols=40 Identities=10% Similarity=0.285 Sum_probs=36.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
+-+.++++|++|++ .|+++++.||-....+..+.+++|++
T Consensus 25 i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 45789999999999 59999999999999999999999884
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0002 Score=75.53 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=83.2
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----E-ecCCHhhH--HHHHHHHHhhc---CCeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----Y-CSLKPEDK--LNHVKRTSRDM---GGGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~-a~~~P~~K--~~~V~~l~~~~---g~~Va 662 (750)
.++.|++.++++.|++ .|+++.++|+-+...+..+.++.|+... + ++..|..| .+.++.+.++. ...+.
T Consensus 100 ~~~~~g~~e~L~~Lk~-~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKK-QGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 4788999999999998 5999999999999999999999998653 2 22233333 23344433322 35699
Q ss_pred EEcCCccCHHHHHhCCcc-EEe--CCC-CcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 663 MVGEGINDAPALAAATVG-IVL--AQR-ASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG-Iam--g~~-~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
||||+.||..+.+.|++- +++ |.. ..+.....+|.++ +++..+..++.
T Consensus 179 ~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 999999999999999973 333 321 2233445799988 66777765543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00028 Score=74.47 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=69.2
Q ss_pred HHHHhcCCcEEEEe---cCCCHHHHHHHHHHcCCc----eEEecCCHh-hHHHHHHHHHhhc---C-CeEEEEcCCccCH
Q 004479 604 AELKDHARLRVMML---TGDHESSAQRVANAVGIN----EVYCSLKPE-DKLNHVKRTSRDM---G-GGLIMVGEGINDA 671 (750)
Q Consensus 604 ~~Lk~~agi~v~ml---TGD~~~tA~~iA~~~GI~----~v~a~~~P~-~K~~~V~~l~~~~---g-~~VamvGDG~NDa 671 (750)
+.+++ .++...++ +...........+..|+. ..+-+..|. .|..-++.+.+.. . ..|+++||+.||.
T Consensus 142 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi 220 (273)
T PRK00192 142 RLAKD-REFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDL 220 (273)
T ss_pred HHHHh-cccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhH
Confidence 34444 34544433 444444444545566764 223343333 7888888877542 3 7899999999999
Q ss_pred HHHHhCCccEEeCCCCcHHHH----hhc-CEEEe--cCCCCCHHHHHH
Q 004479 672 PALAAATVGIVLAQRASATAI----AVA-DVLLL--RNNISGVPFCVA 712 (750)
Q Consensus 672 pAL~~AdVGIamg~~~s~~A~----~aA-DivL~--~~~l~~l~~~i~ 712 (750)
+|++.|++|++|++ +.+..+ +.| +.+.. .++=.++.++++
T Consensus 221 ~m~~~ag~~vam~N-A~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 221 PMLEAADIAVVVPG-PDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred HHHHhCCeeEEeCC-CCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 99999999999996 777777 555 56663 444556666554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00029 Score=71.87 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=77.9
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC-------CHhhHHHHHHHHHhhcC---CeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL-------KPEDKLNHVKRTSRDMG---GGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~-------~P~~K~~~V~~l~~~~g---~~Va 662 (750)
-++.|++.++++.|++ .|+++.++|+........+.++.||...|... .+.-+.+..+.+.++.| ..+.
T Consensus 91 ~~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKA-QGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4678999999999999 59999999999999999999999997533221 11122234444443323 4689
Q ss_pred EEcCCccCHHHHHhCCccEEeCCCCc---HHHHhhcCEEEecCCCCCHH
Q 004479 663 MVGEGINDAPALAAATVGIVLAQRAS---ATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIamg~~~s---~~A~~aADivL~~~~l~~l~ 708 (750)
|+||..||..+-+.|++....-..+. +.-...+|+++ .++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 99999999999999997654322121 11123577776 4555443
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00048 Score=69.57 Aligned_cols=112 Identities=22% Similarity=0.331 Sum_probs=77.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-CCHhhH--HHHHHHHHhhcC---CeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-LKPEDK--LNHVKRTSRDMG---GGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-~~P~~K--~~~V~~l~~~~g---~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+-+...+..+.+..|+.. +++. -.+..| .+.+..+.++.| ..+.|
T Consensus 85 ~~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 85 SVFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence 588999999999999 599999999999999999999999854 3332 111112 233333333222 56999
Q ss_pred EcCCccCHHHHHhCCccEE-e--CCCC-cHHHHhhcCEEEecCCCCCHH
Q 004479 664 VGEGINDAPALAAATVGIV-L--AQRA-SATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGIa-m--g~~~-s~~A~~aADivL~~~~l~~l~ 708 (750)
+||..||..+.++|++-.. + |... .......+|+++ +++..+.
T Consensus 164 igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 9999999999999997643 3 2211 123334688887 5555544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0011 Score=69.74 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=80.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
.+-+++.++|+.|++..|+.++++||-.......+.+.+++.-
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 4558899999999873489999999999999998887776420
Q ss_pred ------------------------------------------------EEecCCHh--hHHHHHHHHHhhcC---CeEEE
Q 004479 637 ------------------------------------------------VYCSLKPE--DKLNHVKRTSRDMG---GGLIM 663 (750)
Q Consensus 637 ------------------------------------------------v~a~~~P~--~K~~~V~~l~~~~g---~~Vam 663 (750)
.+-++.|. +|..-++.+.+..| ..+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 11223332 45555655554433 56899
Q ss_pred EcCCccCHHHHHhC----CccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 664 VGEGINDAPALAAA----TVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 664 vGDG~NDapAL~~A----dVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+||+.||-+|++.+ +.||+||... ..|++.| ++...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeC--CCHHHHHHHHH
Confidence 99999999999999 9999999632 4478877 45666655543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.002 Score=67.87 Aligned_cols=114 Identities=19% Similarity=0.277 Sum_probs=81.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC---CH-hhHHHHHHHHHhhc---CCeEEEEcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL---KP-EDKLNHVKRTSRDM---GGGLIMVGE 666 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~---~P-~~K~~~V~~l~~~~---g~~VamvGD 666 (750)
++.|++.+.++.|++ .|+++.++|+.+...+..+-+..|+.+.|..+ .| ..|.+..+.+.++. ...++||||
T Consensus 142 ~l~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECC
Confidence 578999999999999 59999999999999999999999997533211 11 12444444443321 346999999
Q ss_pred CccCHHHHHhCCccEE---eCCCCcH--HHHhhcCEEEecCCCCCHHHHH
Q 004479 667 GINDAPALAAATVGIV---LAQRASA--TAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 667 G~NDapAL~~AdVGIa---mg~~~s~--~A~~aADivL~~~~l~~l~~~i 711 (750)
..+|..|-++|.+-.. -|. .+. .....+|+++ +++..|+.++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~-~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGF-NDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCC-CCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 9999999999987532 332 222 2234589988 6777776654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0027 Score=64.24 Aligned_cols=91 Identities=12% Similarity=0.082 Sum_probs=72.0
Q ss_pred CCchhHHHHHH-HHHhcCCcEEEEecCCCHHHHHHHHHHc---CCceEEe--------------cCCHhhHHHHHHHHHh
Q 004479 594 RPRPGVSDVIA-ELKDHARLRVMMLTGDHESSAQRVANAV---GINEVYC--------------SLKPEDKLNHVKRTSR 655 (750)
Q Consensus 594 ~lr~~a~~~I~-~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI~~v~a--------------~~~P~~K~~~V~~l~~ 655 (750)
.++|++.+.|+ .+++ .|.+++++|+=....++.+|+.. |++++.| .+.-++|+..+++.-.
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 47899999996 7887 59999999999999999999884 4344322 2555889988876542
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
......-+-||..||.|+|+.||-.++++.
T Consensus 173 ~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 173 SPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 212445578999999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0047 Score=64.49 Aligned_cols=119 Identities=13% Similarity=0.220 Sum_probs=83.1
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc----eEEecC-----------C--H----hhHHHHHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----EVYCSL-----------K--P----EDKLNHVK 651 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----~v~a~~-----------~--P----~~K~~~V~ 651 (750)
-++||++.+.++.|++ .|+++.++||=....+..+.+++|+. .++|+. . | ..|.+.+.
T Consensus 120 l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4689999999999999 69999999999999999999999994 342211 1 2 34665544
Q ss_pred H-HHhhc-----CCeEEEEcCCccCHHHHHhC---CccEEeC--CCCcH----HHHhhcCEEEecCCCCCHHHHHH
Q 004479 652 R-TSRDM-----GGGLIMVGEGINDAPALAAA---TVGIVLA--QRASA----TAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 652 ~-l~~~~-----g~~VamvGDG~NDapAL~~A---dVGIamg--~~~s~----~A~~aADivL~~~~l~~l~~~i~ 712 (750)
. ..+.. ...|.|+|||.||.+|-.-. .-=|.+| ..--+ .=.++=||||.+|.=-.++..+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~il 274 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSIL 274 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHHH
Confidence 2 22211 35799999999999996433 1123333 21112 23467899999998877777653
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0034 Score=63.53 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=73.0
Q ss_pred CCchhHHHHH-HHHHhcCCcEEEEecCCCHHHHHHHHHHcCC---ceEEe--------------cCCHhhHHHHHHHHHh
Q 004479 594 RPRPGVSDVI-AELKDHARLRVMMLTGDHESSAQRVANAVGI---NEVYC--------------SLKPEDKLNHVKRTSR 655 (750)
Q Consensus 594 ~lr~~a~~~I-~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI---~~v~a--------------~~~P~~K~~~V~~l~~ 655 (750)
.++|++.+.| +.|++ .|.+++++|+-....+..+++.+|+ +++.| .+.-++|+..+++.-.
T Consensus 95 ~~~pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 4589999999 56887 6999999999999999999999994 54322 2566899988876532
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
......-+-||..||.|+|+.|+-.++++.
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 213445578999999999999999999975
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0014 Score=67.56 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhhcCC---eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC----EEEecCCCCCHHHHHH
Q 004479 645 DKLNHVKRTSRDMGG---GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD----VLLLRNNISGVPFCVA 712 (750)
Q Consensus 645 ~K~~~V~~l~~~~g~---~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD----ivL~~~~l~~l~~~i~ 712 (750)
.|...++.+.++.|. .++++||+.||.+|++.++.||+|++ +.+..++.|| ++.-.++=.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n-a~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN-HDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC-CcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 788888888776442 58999999999999999999999996 7788889999 6654455556666654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=64.96 Aligned_cols=113 Identities=20% Similarity=0.125 Sum_probs=77.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----Ee-cC----CHhh--HHHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----YC-SL----KPED--KLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~a-~~----~P~~--K~~~V~~l~~~~g~~Va 662 (750)
++.|++.+.++.|++ .|+++.++|+.+...+..+-+..|+.+. ++ .. .|.- =...++.+.-. ...+.
T Consensus 95 ~~~pg~~~~L~~L~~-~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p~~~l 172 (229)
T PRK13226 95 QLFDGVEGMLQRLEC-AGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-PTDCV 172 (229)
T ss_pred eeCCCHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-hhhEE
Confidence 578999999999999 5999999999999999988899998642 22 21 2221 12333333322 35699
Q ss_pred EEcCCccCHHHHHhCCccE---EeCCC--CcHHHHhhcCEEEecCCCCCHHHH
Q 004479 663 MVGEGINDAPALAAATVGI---VLAQR--ASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGI---amg~~--~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
||||..||..+-++|.+-. .-|.. ........+|+++ +++..|...
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 9999999999999998763 23321 1112234689988 555555443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0042 Score=69.68 Aligned_cols=161 Identities=19% Similarity=0.274 Sum_probs=122.0
Q ss_pred EEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----------------------------
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----------------------------- 636 (750)
Q Consensus 586 lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----------------------------- 636 (750)
.|++...-+.|++....|+.|-+ +-+|.+-.+-.++...+-.|+++||..
T Consensus 818 ~GlVs~~Yea~ldiVriIdgL~n-aCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~q 896 (1354)
T KOG4383|consen 818 CGLVSLHYEAILDIVRIIDGLDN-ACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQ 896 (1354)
T ss_pred hhhhhhhccchhhHHHHHHHhhh-hheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhcc
Confidence 79999999999999999999998 899999999999999999999999951
Q ss_pred --------------------------------------------------------------------------EEecCC
Q 004479 637 --------------------------------------------------------------------------VYCSLK 642 (750)
Q Consensus 637 --------------------------------------------------------------------------v~a~~~ 642 (750)
.|..++
T Consensus 897 kpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcn 976 (1354)
T KOG4383|consen 897 KPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCN 976 (1354)
T ss_pred CcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCC
Confidence 799999
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHH--HHhCCccEEeCCC------------CcHHH-Hhhc------------
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPA--LAAATVGIVLAQR------------ASATA-IAVA------------ 695 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapA--L~~AdVGIamg~~------------~s~~A-~~aA------------ 695 (750)
|+.--++|+-+|+. |++++.+|.-.|-... .-+||++|++-.- ++.+. .++.
T Consensus 977 peamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqL 1055 (1354)
T KOG4383|consen 977 PEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQL 1055 (1354)
T ss_pred HHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccc
Confidence 99999999999988 9999999998886553 3688999887421 11111 1122
Q ss_pred -----CEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhcccccc
Q 004479 696 -----DVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL---PSVLGFLPLWL 748 (750)
Q Consensus 696 -----DivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i---~~~~G~l~~~~ 748 (750)
|+-+-...+-++.++|.-+|..+..+|..+.|.+...+...+ +.-+-++|+.+
T Consensus 1056 naL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~ 1116 (1354)
T KOG4383|consen 1056 NALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIF 1116 (1354)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 333333334456688888999999999999888754333322 23334566543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.004 Score=64.73 Aligned_cols=101 Identities=11% Similarity=0.219 Sum_probs=75.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------------------------------
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------ 636 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------ 636 (750)
.+..|...++++++++ .|+.++..||-.....+.+.+++++..
T Consensus 20 ~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 20 NQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred hHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567888999999998 488999999999999999988888631
Q ss_pred -----------------------------------------------------EEe-----cCCH--hhHHHHHHHHHhh
Q 004479 637 -----------------------------------------------------VYC-----SLKP--EDKLNHVKRTSRD 656 (750)
Q Consensus 637 -----------------------------------------------------v~a-----~~~P--~~K~~~V~~l~~~ 656 (750)
+++ +..| -.|..-++.++++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 111 2233 2466666666654
Q ss_pred cC---CeEEEEcCCccCHHHHHh-CCccEEeCCCCcHHHHhhc
Q 004479 657 MG---GGLIMVGEGINDAPALAA-ATVGIVLAQRASATAIAVA 695 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~-AdVGIamg~~~s~~A~~aA 695 (750)
.| ..|+++||+.||.+|++. ++.|++|++ +.+..++.+
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n-a~~~~k~~~ 220 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN-AQEELLQWY 220 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECC-CHHHHHHHH
Confidence 33 569999999999999998 789999996 666556543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0046 Score=65.04 Aligned_cols=115 Identities=21% Similarity=0.295 Sum_probs=78.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----EEec-CCHhhH---HHHHHHHHhhcC----Ce
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-----VYCS-LKPEDK---LNHVKRTSRDMG----GG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-----v~a~-~~P~~K---~~~V~~l~~~~g----~~ 660 (750)
++-|++.++++.|++ .|+++.++||.....+..+-+..|+.. +++. -.+..| .-+.+.+++. | ..
T Consensus 101 ~~~pg~~elL~~L~~-~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l-~~~~~~e 178 (267)
T PRK13478 101 TPIPGVLEVIAALRA-RGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIEL-GVYDVAA 178 (267)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHc-CCCCCcc
Confidence 567999999999999 599999999999998888777766532 3322 111112 2233333332 3 45
Q ss_pred EEEEcCCccCHHHHHhCCc---cEEeCCCC------------------------cHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 661 LIMVGEGINDAPALAAATV---GIVLAQRA------------------------SATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdV---GIamg~~~------------------------s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+.||||..+|..|-+.|.+ |+.-|... .......+|+++ +++..+...+.
T Consensus 179 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 179 CVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred eEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 8999999999999999986 55544321 122334588888 77777776653
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0033 Score=62.82 Aligned_cols=84 Identities=20% Similarity=0.251 Sum_probs=63.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe----------cCCHhhHHHHHHHHHhhcCCeE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC----------SLKPEDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a----------~~~P~~K~~~V~~l~~~~g~~V 661 (750)
.+++.+++.++++.|++ .|+++.++||-....+..+-+.+|+...|. .-.|+--...++.+.-. ...+
T Consensus 104 ~~~~~~~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~-~~~~ 181 (197)
T TIGR01548 104 EDETLLTPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVE-ACHA 181 (197)
T ss_pred ccccccCHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcC-cccE
Confidence 45577788999999998 599999999999999999999999975331 11233334444444433 4579
Q ss_pred EEEcCCccCHHHHHhC
Q 004479 662 IMVGEGINDAPALAAA 677 (750)
Q Consensus 662 amvGDG~NDapAL~~A 677 (750)
.||||+.+|..|-++|
T Consensus 182 i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 182 AMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEeCCHHHHHHHHhC
Confidence 9999999999887664
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0069 Score=61.97 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=37.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.+..-+++.++|++|++ .|+++++.||-....+..+.+++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 45566789999999999 5999999999999999999999997
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0067 Score=63.18 Aligned_cols=84 Identities=23% Similarity=0.272 Sum_probs=63.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ec-----CCHhhHHHHHHHHHhhcC----C
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CS-----LKPEDKLNHVKRTSRDMG----G 659 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~-----~~P~~K~~~V~~l~~~~g----~ 659 (750)
++.|++.+.++.|++ .|+++.++|+.....+..+-++.|+...| +. ..|. ..-+.+.+++. | .
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l-~~~~~~ 175 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIEL-GVYDVA 175 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHc-CCCCch
Confidence 567999999999999 59999999999999999998888875532 21 1232 22333444433 3 3
Q ss_pred eEEEEcCCccCHHHHHhCCcc
Q 004479 660 GLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVG 680 (750)
.+.||||..+|..|-+.|.+-
T Consensus 176 ~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 176 ACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred heEEECCcHHHHHHHHHCCCe
Confidence 489999999999999999854
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0084 Score=55.64 Aligned_cols=86 Identities=21% Similarity=0.257 Sum_probs=63.1
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCC--------HHHHHHHHHHcCCceEEe---cCCHhhHHHHHHHHHhhc----
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDH--------ESSAQRVANAVGINEVYC---SLKPEDKLNHVKRTSRDM---- 657 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~--------~~tA~~iA~~~GI~~v~a---~~~P~~K~~~V~~l~~~~---- 657 (750)
-++.|++.++++.|++ .|+++.++|+.. ......+.+++|+...+. .-.+.-|.+..+.+.++.
T Consensus 24 ~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 3678999999999999 699999999998 788889999999863222 111122334444443332
Q ss_pred CCeEEEEcC-CccCHHHHHhCCc
Q 004479 658 GGGLIMVGE-GINDAPALAAATV 679 (750)
Q Consensus 658 g~~VamvGD-G~NDapAL~~AdV 679 (750)
...+.|||| -.+|..+-+.+.+
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred hhheEEEcCCCcccHHHHHHCCC
Confidence 367999999 5999999988875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.011 Score=61.80 Aligned_cols=42 Identities=5% Similarity=0.143 Sum_probs=37.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
+..-+.+.++|++|++ .|+.+++.||-.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4466789999999999 59999999999999999999999984
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0084 Score=62.73 Aligned_cols=110 Identities=16% Similarity=0.303 Sum_probs=75.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-----CCHhhHHHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPEDKLNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~P~~K~~~V~~l~~~~---g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-....+..+-+.+|+.. +++. -.|. .++.....++. ...+
T Consensus 109 ~l~pg~~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~--Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 109 RLRPGSREFVQALKK-HEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPD--PEMFMYAAERLGFIPERC 185 (260)
T ss_pred ccCCCHHHHHHHHHH-CCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCC--HHHHHHHHHHhCCChHHe
Confidence 578999999999999 599999999999999999999999964 3221 1232 22333222221 3569
Q ss_pred EEEcCCccCHHHHHhCCccE-EeCCCCcHHHHhhcCEEEecCCCCCHH
Q 004479 662 IMVGEGINDAPALAAATVGI-VLAQRASATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGI-amg~~~s~~A~~aADivL~~~~l~~l~ 708 (750)
.||||..+|..|-++|.+-. ++.+..+......+|.++ ++++.+.
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 99999999999999999743 333222232334578876 4555443
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0093 Score=62.00 Aligned_cols=109 Identities=16% Similarity=0.210 Sum_probs=75.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ecC----CHhh--HHHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CSL----KPED--KLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~~----~P~~--K~~~V~~l~~~~g~~Va 662 (750)
++.|++.++++.|++ .|+++.++|+-....+..+-+.+|+.+.| ++- .|.- =....+.+.-. ...+.
T Consensus 108 ~l~pgv~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~l 185 (248)
T PLN02770 108 KPLNGLYKLKKWIED-RGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS-KDHTF 185 (248)
T ss_pred CcCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCC-hhHEE
Confidence 578999999999999 59999999999999999999999986422 222 2222 12223333222 35699
Q ss_pred EEcCCccCHHHHHhCCcc---EEeCCCCcHHHHhhcCEEEecCCCCC
Q 004479 663 MVGEGINDAPALAAATVG---IVLAQRASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG---Iamg~~~s~~A~~aADivL~~~~l~~ 706 (750)
||||..+|..|-++|.+- +.-|....+.....+|.++ +++..
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 999999999999999864 3223211222234688887 56665
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0071 Score=61.44 Aligned_cols=113 Identities=20% Similarity=0.328 Sum_probs=78.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--e----EEec-----CCHhhHHHHHHHHHhhcC---
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--E----VYCS-----LKPEDKLNHVKRTSRDMG--- 658 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~----v~a~-----~~P~~K~~~V~~l~~~~g--- 658 (750)
.++.||+.+.++.|++ .|+++.++|+-.......+-+..|+. + +++. -.|. .++.....++.|
T Consensus 86 ~~l~~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~--p~~~~~a~~~~~~~~ 162 (220)
T TIGR03351 86 PVALPGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPA--PDLILRAMELTGVQD 162 (220)
T ss_pred CccCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCC--HHHHHHHHHHcCCCC
Confidence 4799999999999999 59999999999999999999999986 4 3332 2232 233333222213
Q ss_pred -CeEEEEcCCccCHHHHHhCCccE--EeCCC-CcH--HHHhhcCEEEecCCCCCHHHH
Q 004479 659 -GGLIMVGEGINDAPALAAATVGI--VLAQR-ASA--TAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 659 -~~VamvGDG~NDapAL~~AdVGI--amg~~-~s~--~A~~aADivL~~~~l~~l~~~ 710 (750)
..+.||||+.+|..|-++|++.. ++..+ .+. .....+|.++ ++++.+..+
T Consensus 163 ~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 163 VQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred hhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 46999999999999999999986 23221 121 1223577777 556555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0071 Score=68.84 Aligned_cols=117 Identities=13% Similarity=0.167 Sum_probs=81.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec------CCHhhHHHHHHHHHhh-cCCeEEEEcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS------LKPEDKLNHVKRTSRD-MGGGLIMVGE 666 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~------~~P~~K~~~V~~l~~~-~g~~VamvGD 666 (750)
++.|++.+.++.||+ .|+++.++|+-....+..+-+.+|+...|.. ..+..|-+.+....++ .-..+.||||
T Consensus 330 ~l~pG~~e~L~~Lk~-~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGD 408 (459)
T PRK06698 330 ALYPNVKEIFTYIKE-NNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGD 408 (459)
T ss_pred CcCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeC
Confidence 688999999999999 5999999999999999999999999643221 1111232333333322 1356999999
Q ss_pred CccCHHHHHhCCcc-EEeCCC-CcHHHHhhcCEEEecCCCCCHHHHHHH
Q 004479 667 GINDAPALAAATVG-IVLAQR-ASATAIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 667 G~NDapAL~~AdVG-Iamg~~-~s~~A~~aADivL~~~~l~~l~~~i~~ 713 (750)
..+|..|-+.|.+- |++... ..+.....+|+++ ++++.+..++..
T Consensus 409 s~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 409 RLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred CHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 99999999999973 344221 1222234588887 667766665543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0068 Score=62.22 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=63.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecC----CCHHHHHHHHHHcCC--c----eEEecCCH--hhHHHHHHHHHhhcCCe
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTG----DHESSAQRVANAVGI--N----EVYCSLKP--EDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTG----D~~~tA~~iA~~~GI--~----~v~a~~~P--~~K~~~V~~l~~~~g~~ 660 (750)
-.+.|++++.++.|++ .|+++.++|| -...|+..+.+..|+ . .+++.-++ .+|... +++. +.
T Consensus 113 a~p~~Ga~elL~~L~~-~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~---l~~~--~i 186 (237)
T PRK11009 113 SIPKEVARQLIDMHVK-RGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQW---LKKK--NI 186 (237)
T ss_pred CcchHHHHHHHHHHHH-CCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHH---HHhc--CC
Confidence 3477889999999998 5999999999 457799999999999 4 34444333 445553 3433 35
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.|+||..+|..+-+.|++-
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCc
Confidence 89999999999999998864
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=64.67 Aligned_cols=72 Identities=14% Similarity=0.284 Sum_probs=49.1
Q ss_pred cCCHh--hHHHHHHHHHhhc---C---CeEEEEcCCccCHHHHHhCC-ccEEeCCCCcHHHHhh--------cCEEEec-
Q 004479 640 SLKPE--DKLNHVKRTSRDM---G---GGLIMVGEGINDAPALAAAT-VGIVLAQRASATAIAV--------ADVLLLR- 701 (750)
Q Consensus 640 ~~~P~--~K~~~V~~l~~~~---g---~~VamvGDG~NDapAL~~Ad-VGIamg~~~s~~A~~a--------ADivL~~- 701 (750)
++.|. .|..-++.|+++. | ..+..+||+.||.+||+.++ .||+|++ +.+..++. ++++..+
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N-A~~elk~~a~~~~~~~~~~~~a~~ 246 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN-AQEELLQWYAENAKDNPKIIHATE 246 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC-CcHHHHHHHHhhccCCCcEEEcCC
Confidence 34444 3777777776653 2 36899999999999999999 6999997 66666653 2555442
Q ss_pred CCCCCHHHHHH
Q 004479 702 NNISGVPFCVA 712 (750)
Q Consensus 702 ~~l~~l~~~i~ 712 (750)
.+-.++.++++
T Consensus 247 ~~~~GI~~al~ 257 (413)
T PLN02382 247 RCAAGIIQAIG 257 (413)
T ss_pred CCccHHHHHHH
Confidence 34455555553
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0069 Score=62.18 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC----CHHHHHHHHHHcCCceE----EecCC-H---hhHHHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD----HESSAQRVANAVGINEV----YCSLK-P---EDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD----~~~tA~~iA~~~GI~~v----~a~~~-P---~~K~~~V~~l~~~~g~~V 661 (750)
.+.+++++.++.|++ .|+++.++|+- ...++..+.+.+|+.+. ++.-. + .+|. ..+++. | .+
T Consensus 114 ~p~~~a~elL~~l~~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~-~-i~ 187 (237)
T TIGR01672 114 IPKEVARQLIDMHQR-RGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDK-N-IR 187 (237)
T ss_pred cchhHHHHHHHHHHH-CCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhC-C-Ce
Confidence 455569999999999 59999999996 77899999999999753 33211 0 1243 344443 4 57
Q ss_pred EEEcCCccCHHHHHhCCcc
Q 004479 662 IMVGEGINDAPALAAATVG 680 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVG 680 (750)
.|+||..||..+-+.|.+-
T Consensus 188 i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 188 IHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred EEEeCCHHHHHHHHHCCCC
Confidence 9999999999999888753
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0044 Score=53.68 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=45.3
Q ss_pred CCCCchHHHHHhhhcCCCC---------CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccC
Q 004479 488 GTTHPIGRAVVDHSIGKDL---------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKS 555 (750)
Q Consensus 488 ~s~hP~~~Ai~~~~~~~~~---------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~ 555 (750)
....|.+.||+.++...+. ....+..++|.+.+++|+++.. +++.++.++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-----~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-----NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-----CCCEEEEEcCCChHHHHHhcCC
Confidence 3566888888887755422 2234556777888888888874 2345777999999999999974
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.014 Score=58.43 Aligned_cols=40 Identities=13% Similarity=0.360 Sum_probs=35.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
++.+++.+++++|+++ |++++++||-.......+.++++.
T Consensus 17 ~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~ 56 (204)
T TIGR01484 17 ELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPL 56 (204)
T ss_pred cCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCC
Confidence 4778999999999994 899999999999999999887553
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.022 Score=56.26 Aligned_cols=118 Identities=20% Similarity=0.314 Sum_probs=91.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------------------- 635 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------------------- 635 (750)
++-|++.++.+.|++. ...+++|---.+-++++|..+|+.
T Consensus 83 ~lvPgA~etm~~l~~~--~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER--WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc--CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4669999999999863 678888888999999999999994
Q ss_pred ------eEEecCCHhhHHHHHHHHH---------------hhc--CCeEEEEcCCccCHHHHHhCC-cc-EEeCCCCcHH
Q 004479 636 ------EVYCSLKPEDKLNHVKRTS---------------RDM--GGGLIMVGEGINDAPALAAAT-VG-IVLAQRASAT 690 (750)
Q Consensus 636 ------~v~a~~~P~~K~~~V~~l~---------------~~~--g~~VamvGDG~NDapAL~~Ad-VG-Iamg~~~s~~ 690 (750)
++|.|+.|.+-.+++...+ ... ....+.|||.+.|..+|+.+. -| +|+.-+|..-
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1788888876555555443 211 234688999999999999874 22 4444456788
Q ss_pred HHhhcCEEEecCCCCCHHHHHHH
Q 004479 691 AIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 691 A~~aADivL~~~~l~~l~~~i~~ 713 (750)
|..-||+.+..++.+++..+|.+
T Consensus 241 al~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccccceEEeccchhhhhHHHHH
Confidence 89999999999999998888875
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.016 Score=67.15 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=35.2
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.-+.+.++|++|++ .|+.+++.||-.......+++++|+
T Consensus 434 i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 44678999999999 6999999999999999999999986
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.02 Score=56.31 Aligned_cols=114 Identities=28% Similarity=0.350 Sum_probs=67.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCC--ceEEec----------CCH--h
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGI--NEVYCS----------LKP--E 644 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI--~~v~a~----------~~P--~ 644 (750)
.+.|++.+++++|++ .|+++.++|..+. .....+-+..|+ +.++.. ..| +
T Consensus 29 ~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~ 107 (181)
T PRK08942 29 IPIPGSIEAIARLKQ-AGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPG 107 (181)
T ss_pred EECCCHHHHHHHHHH-CCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHH
Confidence 357999999999999 5999999998763 112233345665 444421 122 2
Q ss_pred hHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccE-EeCCCCcH--HHHhhc--CEEEecCCCCCHHHHH
Q 004479 645 DKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGI-VLAQRASA--TAIAVA--DVLLLRNNISGVPFCV 711 (750)
Q Consensus 645 ~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGI-amg~~~s~--~A~~aA--DivL~~~~l~~l~~~i 711 (750)
-=...++.+.-. ...+.||||..+|..+-++|++-. .+..+... .....+ |+++ +++..+..++
T Consensus 108 ~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l 176 (181)
T PRK08942 108 MLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQAL 176 (181)
T ss_pred HHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHH
Confidence 223333333322 367999999999999999998642 22211111 112235 7776 5565555543
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=58.41 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=73.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---eEEec-----CCHhhHHHHHHHHHhh--cCCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN---EVYCS-----LKPEDKLNHVKRTSRD--MGGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~---~v~a~-----~~P~~K~~~V~~l~~~--~g~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+.+...+...-+..|+. .+.+. ..|+- .-+...+++. ....+.|
T Consensus 83 ~~~pg~~e~L~~L~~-~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p-~~~~~~~~~~g~~p~~~l~ 160 (218)
T PRK11587 83 TALPGAIALLNHLNK-LGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEP-DAYLLGAQLLGLAPQECVV 160 (218)
T ss_pred eeCcCHHHHHHHHHH-cCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCc-HHHHHHHHHcCCCcccEEE
Confidence 578999999999999 59999999998877777776777874 22221 12321 1122222222 1367999
Q ss_pred EcCCccCHHHHHhCCcc-EEeCCCCcHHHHhhcCEEEecCCCCCH
Q 004479 664 VGEGINDAPALAAATVG-IVLAQRASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 664 vGDG~NDapAL~~AdVG-Iamg~~~s~~A~~aADivL~~~~l~~l 707 (750)
|||..+|..|-+.|.+- |++...........+|+++ ++++.+
T Consensus 161 igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 161 VEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred EecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe--cchhhe
Confidence 99999999999999974 5554322223344678877 445543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.012 Score=58.66 Aligned_cols=85 Identities=15% Similarity=0.250 Sum_probs=63.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhH--HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDK--LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K--~~~V~~l~~~~g~~Va 662 (750)
++.|++.+++++|++ .|+++.++|+-+......+.+.+|+.+ +++ ...|.-. ....+.+.-. -..+.
T Consensus 92 ~~~~~~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p~~~~ 169 (198)
T TIGR01428 92 PPHPDVPAGLRALKE-RGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-PDEVL 169 (198)
T ss_pred CCCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-hhhEE
Confidence 578999999999999 599999999999999999999999853 332 2234322 2222222222 35689
Q ss_pred EEcCCccCHHHHHhCCcc
Q 004479 663 MVGEGINDAPALAAATVG 680 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG 680 (750)
||||+.+|..+-++|.+-
T Consensus 170 ~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFK 187 (198)
T ss_pred EEeCCHHHHHHHHHCCCc
Confidence 999999999998888765
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.019 Score=58.28 Aligned_cols=90 Identities=22% Similarity=0.316 Sum_probs=65.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhh--cCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRD--MGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~--~g~~Va 662 (750)
++.|++.++++.|++ .|+++.++|+=+.......-+.+|+.. +++ +..|... -+.+.+++. ....+.
T Consensus 94 ~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 94 RVYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPK-IFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHH-HHHHHHHHcCCChhhEE
Confidence 578999999999999 599999999988888888889999964 222 2234322 122223322 135699
Q ss_pred EEcCCc-cCHHHHHhCCcc-EEeCC
Q 004479 663 MVGEGI-NDAPALAAATVG-IVLAQ 685 (750)
Q Consensus 663 mvGDG~-NDapAL~~AdVG-Iamg~ 685 (750)
||||.. +|..+-++|++- |.+..
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECC
Confidence 999998 999999999863 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.018 Score=61.56 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=70.2
Q ss_pred ecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-EE----e--------------cCCHhhHHHHHH
Q 004479 591 LEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-VY----C--------------SLKPEDKLNHVK 651 (750)
Q Consensus 591 ~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-v~----a--------------~~~P~~K~~~V~ 651 (750)
..+++.|++.++++.|++ .|+++.++||-...++..+.+.+|+.. .| + +-.|+-|...++
T Consensus 184 ~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~ 262 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFW 262 (300)
T ss_pred ccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHH
Confidence 468899999999999999 599999999999999999999998875 11 1 223445555555
Q ss_pred HHHhhcCCeEEEEcCCccCHHHHHhCCccE
Q 004479 652 RTSRDMGGGLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 652 ~l~~~~g~~VamvGDG~NDapAL~~AdVGI 681 (750)
++....-..+.||||..+|+-+-+.|.+-.
T Consensus 263 ~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 263 EKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 543211267999999999999999998763
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.033 Score=61.06 Aligned_cols=109 Identities=15% Similarity=0.260 Sum_probs=76.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-----CCHhhH--HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPEDK--LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~P~~K--~~~V~~l~~~~g~~Va 662 (750)
++.||+.+.++.|++ .|+++.++|+-....+..+-+..||.+ +++. -.|+.. ...++.+.-. ...+.
T Consensus 216 ~l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~-Peecl 293 (381)
T PLN02575 216 RLRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI-PERCI 293 (381)
T ss_pred CcCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC-cccEE
Confidence 477999999999999 599999999999999999999999964 3222 133322 2233333322 46799
Q ss_pred EEcCCccCHHHHHhCCccEE-eCCCCcHHH-HhhcCEEEecCCCCCH
Q 004479 663 MVGEGINDAPALAAATVGIV-LAQRASATA-IAVADVLLLRNNISGV 707 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIa-mg~~~s~~A-~~aADivL~~~~l~~l 707 (750)
||||..+|..|-+.|.+-.. +.. +.+.. ...+|+++ +++..+
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECC-CCChhHhcCCCEEE--CCHHHH
Confidence 99999999999999987533 332 22222 23588887 566655
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.024 Score=55.28 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=64.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCC-HHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhc---CCeEEEEcCCc
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDH-ESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM---GGGLIMVGEGI 668 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~-~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~---g~~VamvGDG~ 668 (750)
..+-|++.++++.|++ .|+++.++|+-+ ...+..+.+.+|+...+....|... ..+...++. ...+.||||..
T Consensus 42 ~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~~~~KP~p~--~~~~~l~~~~~~~~~~l~IGDs~ 118 (170)
T TIGR01668 42 NEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGIPVLPHAVKPPGC--AFRRAHPEMGLTSEQVAVVGDRL 118 (170)
T ss_pred CCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCCEEEcCCCCCChH--HHHHHHHHcCCCHHHEEEECCcc
Confidence 3578999999999999 599999999988 6788889999998765444455433 333332221 35699999998
Q ss_pred -cCHHHHHhCCcc
Q 004479 669 -NDAPALAAATVG 680 (750)
Q Consensus 669 -NDapAL~~AdVG 680 (750)
.|..+-+.|++-
T Consensus 119 ~~Di~aA~~aGi~ 131 (170)
T TIGR01668 119 FTDVMGGNRNGSY 131 (170)
T ss_pred hHHHHHHHHcCCe
Confidence 799999998873
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.023 Score=55.63 Aligned_cols=86 Identities=16% Similarity=0.252 Sum_probs=59.5
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHH--------HHHHHHHHcCCceEEec----------CCHhhH--HHHHHHHH
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHES--------SAQRVANAVGINEVYCS----------LKPEDK--LNHVKRTS 654 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~--------tA~~iA~~~GI~~v~a~----------~~P~~K--~~~V~~l~ 654 (750)
+.|++++++++|++ .|+++.++|+.... .....-+..|++.++-. ..|.-. ...++++.
T Consensus 29 ~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~ 107 (173)
T PRK06769 29 LFPFTKASLQKLKA-NHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG 107 (173)
T ss_pred ECCCHHHHHHHHHH-CCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999999999 59999999987641 23444567889886632 123221 23333332
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
-. -+.+.||||..+|..|-++|++-..
T Consensus 108 ~~-p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 108 LD-LTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CC-HHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 22 2569999999999999999987544
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.016 Score=56.92 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=60.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhhc---CCe
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRDM---GGG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~~---g~~ 660 (750)
-++.|++.++++.|++ .|+++.++|+- ..+..+-+.+|+.+ +++ ...|.. ++.+...++. .+.
T Consensus 87 ~~~~~g~~~~l~~l~~-~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~--~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 87 AEVLPGIENFLKRLKK-KGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHP--ETFLLAAELLGVSPNE 161 (185)
T ss_pred CCCCcCHHHHHHHHHH-cCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCCh--HHHHHHHHHcCCCHHH
Confidence 4689999999999999 59999999986 56788888899853 333 123332 2333333221 356
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.||||..+|..+-+.|++-
T Consensus 162 ~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCe
Confidence 89999999999999998774
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.039 Score=56.19 Aligned_cols=111 Identities=16% Similarity=0.298 Sum_probs=73.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cC----CHhhHHHHHHHHHhhcC----Ce
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SL----KPEDKLNHVKRTSRDMG----GG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~----~P~~K~~~V~~l~~~~g----~~ 660 (750)
++.|++.++++.|++ |+++.++|......+...-++.|+.+ +++ +- .|. .++.+...++.| ..
T Consensus 95 ~~~~g~~~~L~~L~~--~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~--p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 95 TPLPGAVELLNALRG--KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPD--VAIFDYALEQMGNPDRSR 170 (224)
T ss_pred ccCccHHHHHHHHHh--CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCC--HHHHHHHHHHcCCCCccc
Confidence 478999999999994 69999999999998888888999853 332 22 342 233333322223 46
Q ss_pred EEEEcCCc-cCHHHHHhCCcc-EEeCCCCcH-HHHhhcCEEEecCCCCCHHHH
Q 004479 661 LIMVGEGI-NDAPALAAATVG-IVLAQRASA-TAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 661 VamvGDG~-NDapAL~~AdVG-Iamg~~~s~-~A~~aADivL~~~~l~~l~~~ 710 (750)
+.||||.. +|..+-++|.+- |.+...+.. .....+|+++ +++..+..+
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 221 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQL 221 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHH
Confidence 99999998 799999999975 444321211 1112467776 556555544
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.025 Score=57.32 Aligned_cols=111 Identities=13% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEecC-----CHhhH--HHHHHHH-HhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCSL-----KPEDK--LNHVKRT-SRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~~-----~P~~K--~~~V~~l-~~~~g~~V 661 (750)
++.|++.+.+++|++ . +++.++|+-.......+-+++|+.. +++.- .|+.. ...++.+ .-. -..+
T Consensus 97 ~~~~g~~~~L~~l~~-~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~~~ 173 (224)
T TIGR02254 97 QLLPGAFELMENLQQ-K-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS-KEEV 173 (224)
T ss_pred eeCccHHHHHHHHHh-c-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-chhe
Confidence 578999999999998 6 8999999999999999999999953 44321 24332 2223333 212 2569
Q ss_pred EEEcCCc-cCHHHHHhCCcc-EEeCCC-CcHHHHhhcCEEEecCCCCCHHH
Q 004479 662 IMVGEGI-NDAPALAAATVG-IVLAQR-ASATAIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 662 amvGDG~-NDapAL~~AdVG-Iamg~~-~s~~A~~aADivL~~~~l~~l~~ 709 (750)
.||||.. +|..+-+.+++- |..... .+......+|.++ ++++.|..
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 9999998 899999999863 333211 1211223456665 45555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.038 Score=53.94 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=65.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecC-CCHHHHHHHHHHcCCc---------e----EEecCCH-hhH--HHHHHHHHh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTG-DHESSAQRVANAVGIN---------E----VYCSLKP-EDK--LNHVKRTSR 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTG-D~~~tA~~iA~~~GI~---------~----v~a~~~P-~~K--~~~V~~l~~ 655 (750)
-+++|++.+.++.|++ .|+++.++|+ |....+..+-+.+|+. . +++.-.| ..| ..+.+.+.+
T Consensus 44 ~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 3578999999999999 6999999996 4899999999999986 3 2222222 222 233444432
Q ss_pred hc-----CCeEEEEcCCccCHHHHHhCCccEEe
Q 004479 656 DM-----GGGLIMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 656 ~~-----g~~VamvGDG~NDapAL~~AdVGIam 683 (750)
.. -..+.||||...|..|-++|.+-...
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 21 25799999999999999988875543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.025 Score=57.87 Aligned_cols=92 Identities=12% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cCCHhhH--HHHHHHHHhhc---CCeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SLKPEDK--LNHVKRTSRDM---GGGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~~P~~K--~~~V~~l~~~~---g~~Va 662 (750)
-++.|++.+.++.|++ .|+++.++|.-+...+...-+..|+.+ +++ .-....| .++.+...++. ...+.
T Consensus 92 ~~~~~g~~e~L~~Lk~-~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKA-SGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHh-CCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 3578999999999999 599999999999999888888899853 332 2111122 33444333322 34699
Q ss_pred EEcCCccCHHHHHhCCcc--EEeCC
Q 004479 663 MVGEGINDAPALAAATVG--IVLAQ 685 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG--Iamg~ 685 (750)
||||..+|..+-++|++. +++..
T Consensus 171 ~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 999999999999999885 44443
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.027 Score=53.99 Aligned_cols=87 Identities=14% Similarity=0.254 Sum_probs=68.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcC----Cce------------------EEec--CCHhhHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVG----INE------------------VYCS--LKPEDKLNH 649 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~G----I~~------------------v~a~--~~P~~K~~~ 649 (750)
.++|+-++.++.++++ +++++++|+--..--..+=++++ |.. ++-. .---+|...
T Consensus 73 ~Idp~fKef~e~ike~-di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~v 151 (220)
T COG4359 73 KIDPGFKEFVEWIKEH-DIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV 151 (220)
T ss_pred ccCccHHHHHHHHHHc-CCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchh
Confidence 4789999999999995 99999999877777777777766 421 1111 112479999
Q ss_pred HHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 650 V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
|+.+++. ...+-|+|||+.|..|-+.+|+=.|
T Consensus 152 I~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 152 IHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred HHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 9999987 7889999999999999888887555
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.021 Score=56.02 Aligned_cols=83 Identities=17% Similarity=0.315 Sum_probs=58.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhhcC---Ce
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRDMG---GG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~~g---~~ 660 (750)
.++.|++.++++.|++ .|+++.++|+... +..+-+.+|+.. ++. +..|+ .++.+...++.| ..
T Consensus 86 ~~~~pg~~~~L~~L~~-~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~--p~~~~~~~~~~~~~~~~ 160 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKK-NNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPD--PEIFLAAAEGLGVSPSE 160 (185)
T ss_pred cccCccHHHHHHHHHH-CCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCC--hHHHHHHHHHcCCCHHH
Confidence 3678999999999999 5999999997432 456788899864 221 12332 333333322212 46
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.||||..+|..+-+.|++-
T Consensus 161 ~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 161 CIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred eEEEecCHHHHHHHHHcCCE
Confidence 99999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.039 Score=53.86 Aligned_cols=83 Identities=19% Similarity=0.295 Sum_probs=58.7
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cCCHhhH------HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SLKPEDK------LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~~P~~K------~~~V~~l~~~~g~~Va 662 (750)
++.|++.+.++.|++ .|+++.++|+-.... ..+.+++|+.+ +++ +-....| ..+.+.+.-. ...+.
T Consensus 85 ~~~~g~~~~l~~l~~-~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~~~~ 161 (183)
T TIGR01509 85 KPLPGVEPLLEALRA-RGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PEECL 161 (183)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cceEE
Confidence 678999999999999 599999999988877 66666689853 333 2211222 2222222222 46799
Q ss_pred EEcCCccCHHHHHhCCc
Q 004479 663 MVGEGINDAPALAAATV 679 (750)
Q Consensus 663 mvGDG~NDapAL~~AdV 679 (750)
|+||...|..+-+++.+
T Consensus 162 ~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGM 178 (183)
T ss_pred EEcCCHHHHHHHHHcCC
Confidence 99999999988888876
|
HAD subfamilies caused by an overly broad single model. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.018 Score=55.48 Aligned_cols=86 Identities=21% Similarity=0.425 Sum_probs=64.8
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc----eEEec-----CCHhhH--HHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----EVYCS-----LKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----~v~a~-----~~P~~K--~~~V~~l~~~~g~~V 661 (750)
.++.|++.+.++.|++ .|++++++|+-+......+.+++|+. .+++. ..|+.. ..+++++.-. .+.+
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-p~~~ 153 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP-PEEI 153 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-GGGE
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCC-cceE
Confidence 4678999999999998 59999999999999999999999986 34432 122221 2233333222 4679
Q ss_pred EEEcCCccCHHHHHhCCcc
Q 004479 662 IMVGEGINDAPALAAATVG 680 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVG 680 (750)
.||||..+|..+-++|++-
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999999999888763
|
... |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.032 Score=52.91 Aligned_cols=86 Identities=19% Similarity=0.368 Sum_probs=60.8
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCCc---eEEecC-------CHhhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGIN---EVYCSL-------KPEDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI~---~v~a~~-------~P~~K~~ 648 (750)
++.|++.++++.|++ .|+++.++|..+. .....+.+.+|+. .+++.. ...-|.+
T Consensus 27 ~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRA-AGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHH-CCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 468999999999999 5999999998762 4566777889986 233211 1122344
Q ss_pred HHHHHHhhcC---CeEEEEcCCccCHHHHHhCCcc
Q 004479 649 HVKRTSRDMG---GGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 649 ~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVG 680 (750)
+.+...++.| +.+.||||...|..+-+.+.+-
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 4444443323 5699999999999998888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.067 Score=56.86 Aligned_cols=112 Identities=18% Similarity=0.296 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc------eEE-ecCCHhhH--HHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------EVY-CSLKPEDK--LNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------~v~-a~~~P~~K--~~~V~~l~~~~---g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-+......+-+..++. .++ +...+..| .++.....++. ...+
T Consensus 144 ~l~pGv~elL~~L~~-~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 222 (286)
T PLN02779 144 PLRPGVLRLMDEALA-AGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRC 222 (286)
T ss_pred CchhhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHE
Confidence 578999999999999 59999999999888887776655321 232 11111112 22333222221 3569
Q ss_pred EEEcCCccCHHHHHhCCccEEeCCCC--cHHHHhhcCEEEecCCCCCHH
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRA--SATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIamg~~~--s~~A~~aADivL~~~~l~~l~ 708 (750)
.||||..+|..|-++|++....-..+ +.-....+|+++ +++..+.
T Consensus 223 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 223 VVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 99999999999999999765433222 111224588887 6666655
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.059 Score=51.17 Aligned_cols=79 Identities=24% Similarity=0.411 Sum_probs=64.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhh--cCCeEEEEcCCc-c
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRD--MGGGLIMVGEGI-N 669 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~--~g~~VamvGDG~-N 669 (750)
...-|++++=++++|. +|+++.++|--++..+...++.+|++-++--..|--+. +-+.+++. .-+.|+||||-. -
T Consensus 45 ~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~-fr~Al~~m~l~~~~vvmVGDqL~T 122 (175)
T COG2179 45 PDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRA-FRRALKEMNLPPEEVVMVGDQLFT 122 (175)
T ss_pred CCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCceeecccCccHHH-HHHHHHHcCCChhHEEEEcchhhh
Confidence 4567899999999999 79999999999999999999999999999999998875 55555553 136799999973 4
Q ss_pred CHHH
Q 004479 670 DAPA 673 (750)
Q Consensus 670 DapA 673 (750)
|.-+
T Consensus 123 DVlg 126 (175)
T COG2179 123 DVLG 126 (175)
T ss_pred hhhc
Confidence 5443
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.05 Score=55.29 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=40.8
Q ss_pred HHHHHcCCc----eEEecCCHh--hHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEEe
Q 004479 627 RVANAVGIN----EVYCSLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 627 ~iA~~~GI~----~v~a~~~P~--~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIam 683 (750)
..-++.|+. ..+-+..|. .|..-++.+.+..| ..|+++||+.||.+||+.|+.|+|+
T Consensus 155 ~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 155 ALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 333444654 233445543 48888887766533 5699999999999999999999996
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.06 Score=51.16 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=57.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEecCC--HhhHHHHHHHHHhhcCC--eEEEEc
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCSLK--PEDKLNHVKRTSRDMGG--GLIMVG 665 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~~~--P~~K~~~V~~l~~~~g~--~VamvG 665 (750)
+..+++.+.++.|++ .|+++.++|+-....+....+.. +.. +++.-. +.-+.+....+.++.|- .+.|||
T Consensus 64 ~~~~g~~e~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iG 141 (154)
T TIGR01549 64 AYIRGAADLLKRLKE-AGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVG 141 (154)
T ss_pred eeccCHHHHHHHHHH-CcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEe
Confidence 345899999999998 59999999999999988887775 432 332211 12223444444333222 799999
Q ss_pred CCccCHHHHHhCC
Q 004479 666 EGINDAPALAAAT 678 (750)
Q Consensus 666 DG~NDapAL~~Ad 678 (750)
|..+|..|-++|.
T Consensus 142 Ds~~Di~aa~~aG 154 (154)
T TIGR01549 142 DNLNDIEGARNAG 154 (154)
T ss_pred CCHHHHHHHHHcc
Confidence 9999998877763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.13 Score=50.32 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCC--ceEEe-c---------------C
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGI--NEVYC-S---------------L 641 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI--~~v~a-~---------------~ 641 (750)
+.|++.+++++|++ .|+++.++|.-+. .....+-.+.|+ +.++. - .
T Consensus 27 ~~pgv~e~L~~Lk~-~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 105 (176)
T TIGR00213 27 FIDGVIDALRELKK-MGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQVCDCR 105 (176)
T ss_pred ECCCHHHHHHHHHH-CCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccCCCCCC
Confidence 56899999999999 6999999997663 122233344444 34432 1 1
Q ss_pred CHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccE--EeCCCC--cHHHHhhcCEEEecCCCCCH
Q 004479 642 KPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGI--VLAQRA--SATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 642 ~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGI--amg~~~--s~~A~~aADivL~~~~l~~l 707 (750)
.|+ .++++...++.| ..+.||||..+|..|-++|++.. ....+. .......+|.++ +++..|
T Consensus 106 KP~--p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~el 174 (176)
T TIGR00213 106 KPK--PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLADL 174 (176)
T ss_pred CCC--HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHHHh
Confidence 332 333333322212 56889999999999999999853 333211 111123488888 555544
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.42 Score=45.90 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=63.9
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH---HHHHH-----cCCc--eEEe--------------cCCHhh-H
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ---RVANA-----VGIN--EVYC--------------SLKPED-K 646 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~---~iA~~-----~GI~--~v~a--------------~~~P~~-K 646 (750)
+|.+.|+++++++++++ .|++++.+||-....+. ...++ .++. .++. .-.|+. |
T Consensus 25 ~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K 103 (157)
T smart00775 25 KDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFK 103 (157)
T ss_pred cCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHH
Confidence 47889999999999999 59999999999888774 44445 2342 1211 234554 8
Q ss_pred HHHHHHHHhh----cCCeEEEEcCCccCHHHHHhCCc
Q 004479 647 LNHVKRTSRD----MGGGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 647 ~~~V~~l~~~----~g~~VamvGDG~NDapAL~~AdV 679 (750)
.+.++.+++. ....++..||+.+|+.+-+++.|
T Consensus 104 ~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 104 IACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 8888888762 13567778999999999887765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.1 Score=57.88 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=71.7
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-HcCCce----EEec-----CCHhhH--HHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN-AVGINE----VYCS-----LKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~-~~GI~~----v~a~-----~~P~~K--~~~V~~l~~~~g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-....+...-+ ..|+.+ +++. ..|.-. ...++.+.-. .+.+
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~-p~~~ 170 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE-PSNC 170 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC-hhHE
Confidence 467999999999999 599999999999888887665 678743 3321 233222 2222222222 4669
Q ss_pred EEEcCCccCHHHHHhCCccE-EeCCC-CcHHHHhhcCEEEecCCCCC
Q 004479 662 IMVGEGINDAPALAAATVGI-VLAQR-ASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGI-amg~~-~s~~A~~aADivL~~~~l~~ 706 (750)
.||||..+|..|-+.|++.. ++... ........+|.++ +++..
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 99999999999999998763 33321 1222334567766 44444
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.11 Score=56.59 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=62.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCC---------------CHHHHHHHHHHcCCc--eEEecC--------CHhhHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGD---------------HESSAQRVANAVGIN--EVYCSL--------KPEDKL 647 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD---------------~~~tA~~iA~~~GI~--~v~a~~--------~P~~K~ 647 (750)
-++.|++.+.+++|++ .|+++.++|.= .......+.+..|+. .++... ...-|.
T Consensus 29 ~~l~pGV~e~L~~Lk~-~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p 107 (354)
T PRK05446 29 LAFEPGVIPALLKLQK-AGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKT 107 (354)
T ss_pred ceECcCHHHHHHHHHh-CCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCH
Confidence 4678999999999998 69999999982 244567788888875 333211 112234
Q ss_pred HHHHHHHhhc---CCeEEEEcCCccCHHHHHhCCccEE
Q 004479 648 NHVKRTSRDM---GGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 648 ~~V~~l~~~~---g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
.++..+.++. ...+.||||+.+|..+-+.|.+-..
T Consensus 108 ~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 108 GLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 4555444431 2679999999999999999887633
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.1 Score=48.33 Aligned_cols=80 Identities=9% Similarity=0.130 Sum_probs=58.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC-CHHHHHHHHHHcC-------Cce-----EEecCCHhhHHHHHHHHHhhcC--
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD-HESSAQRVANAVG-------INE-----VYCSLKPEDKLNHVKRTSRDMG-- 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD-~~~tA~~iA~~~G-------I~~-----v~a~~~P~~K~~~V~~l~~~~g-- 658 (750)
++.|++.+.++.|++ .|+++.++|+- .+..+..+-+..| +.. +.++-.|. .+.+....++.|
T Consensus 29 ~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pk--p~~~~~a~~~lg~~ 105 (128)
T TIGR01681 29 VTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPK--SPRLVEIALKLNGV 105 (128)
T ss_pred HHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcH--HHHHHHHHHHhcCC
Confidence 789999999999999 59999999999 8888888878777 443 22223453 333333333324
Q ss_pred ---CeEEEEcCCccCHHHHHh
Q 004479 659 ---GGLIMVGEGINDAPALAA 676 (750)
Q Consensus 659 ---~~VamvGDG~NDapAL~~ 676 (750)
..+.|+||...|.-+.+.
T Consensus 106 ~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 106 LKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCcceEEEECCCHhHHHHHHh
Confidence 679999999888776653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.19 Score=51.99 Aligned_cols=90 Identities=13% Similarity=0.213 Sum_probs=62.4
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH--HHHHHcCCce-EEec-CCHhh-HHHHHHHHHhh---cC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ--RVANAVGINE-VYCS-LKPED-KLNHVKRTSRD---MG 658 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~--~iA~~~GI~~-v~a~-~~P~~-K~~~V~~l~~~---~g 658 (750)
|.+.-.+.+-|++++++++|++ .|+++.++|.-....+. ...+++|+.. .+-. +++.+ -...++...++ .+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~ 95 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDIRN 95 (242)
T ss_pred cccccCCccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccCCC
Confidence 5556678889999999999999 69999999996655444 5668899975 3333 23332 12333333222 14
Q ss_pred CeEEEEcCCccCHHHHHhC
Q 004479 659 GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~A 677 (750)
..+.|+||+.+|...+...
T Consensus 96 ~~~~~vGd~~~d~~~~~~~ 114 (242)
T TIGR01459 96 GIIYLLGHLENDIINLMQC 114 (242)
T ss_pred ceEEEeCCcccchhhhcCC
Confidence 6799999999999988644
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.21 Score=48.30 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=60.6
Q ss_pred cCCCchhHHHHHHHHHhcCCc-EEEEecCC-------CHHHHHHHHHHcCCceE-EecCCHhhHHHHHHHHHhh----cC
Q 004479 592 EDRPRPGVSDVIAELKDHARL-RVMMLTGD-------HESSAQRVANAVGINEV-YCSLKPEDKLNHVKRTSRD----MG 658 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi-~v~mlTGD-------~~~tA~~iA~~~GI~~v-~a~~~P~~K~~~V~~l~~~----~g 658 (750)
++++-|+..+.+++|++..+. +++++|-- +...|..+++.+||.-+ |....|.-..++.+.++.+ .-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~~kKP~~~~~i~~~~~~~~~~~~p 136 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHRAKKPGCFREILKYFKCQKVVTSP 136 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeCCCCCccHHHHHHHHhhccCCCCc
Confidence 688899999999999995444 69999875 48899999999999854 5567997777777777643 13
Q ss_pred CeEEEEcCC
Q 004479 659 GGLIMVGEG 667 (750)
Q Consensus 659 ~~VamvGDG 667 (750)
+.++||||-
T Consensus 137 ~eiavIGDr 145 (168)
T PF09419_consen 137 SEIAVIGDR 145 (168)
T ss_pred hhEEEEcch
Confidence 569999996
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.2 Score=60.51 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=34.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.+-+++.+++++|++..|+.|+++||-............++
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l 554 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI 554 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe
Confidence 36789999999999845999999999999998887765654
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.17 Score=51.76 Aligned_cols=79 Identities=16% Similarity=0.346 Sum_probs=61.8
Q ss_pred CCchhHHHHHHHHHh-cCCcEEEEecCCCHHHHHHHHHHcCCce----EE----------------------ecCCH-hh
Q 004479 594 RPRPGVSDVIAELKD-HARLRVMMLTGDHESSAQRVANAVGINE----VY----------------------CSLKP-ED 645 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~-~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~----------------------a~~~P-~~ 645 (750)
|+.|+.++.++.|.+ ..|..+.++|-=|..--..+=+.-|+.. || .++.| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 577899999999932 2599999999999999999999999853 12 12233 35
Q ss_pred HHHHHHHHHhh---cC---CeEEEEcCCccCHH
Q 004479 646 KLNHVKRTSRD---MG---GGLIMVGEGINDAP 672 (750)
Q Consensus 646 K~~~V~~l~~~---~g---~~VamvGDG~NDap 672 (750)
|..+++++++. .| .+|.+||||.||--
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 99999988864 13 68999999999954
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.22 Score=52.07 Aligned_cols=82 Identities=10% Similarity=0.240 Sum_probs=60.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCC---HHHHHHHHHHcCCc-----eEEecCCHhhHHHHHHHHHhhcCCeEEE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDH---ESSAQRVANAVGIN-----EVYCSLKPEDKLNHVKRTSRDMGGGLIM 663 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~---~~tA~~iA~~~GI~-----~v~a~~~P~~K~~~V~~l~~~~g~~Vam 663 (750)
..++-|++.+.++.|++ .|+++.++|+-. .+.+...-+..|+. .++.+-....|....+.+.+. ..+++|
T Consensus 116 ~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~-y~Ivl~ 193 (266)
T TIGR01533 116 QAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKD-YEIVLL 193 (266)
T ss_pred CCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhc-CCEEEE
Confidence 35577999999999999 599999999955 34444566778984 466654444566666666555 567999
Q ss_pred EcCCccCHHHHH
Q 004479 664 VGEGINDAPALA 675 (750)
Q Consensus 664 vGDG~NDapAL~ 675 (750)
+||-.+|-....
T Consensus 194 vGD~~~Df~~~~ 205 (266)
T TIGR01533 194 FGDNLLDFDDFF 205 (266)
T ss_pred ECCCHHHhhhhh
Confidence 999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.18 Score=50.30 Aligned_cols=82 Identities=17% Similarity=0.259 Sum_probs=57.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-c----CCHhhHHHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-S----LKPEDKLNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~----~~P~~K~~~V~~l~~~~---g~~V 661 (750)
++-|++.++++.|++ .|+++.++|+-... ...+-+.+|+.. ++. . ..|+- ++.+...++. ...+
T Consensus 105 ~~~~g~~~~l~~L~~-~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~--~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 105 QVYPDAIKLLKDLRE-RGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDP--KIFQEALERAGISPEEA 180 (203)
T ss_pred eeCcCHHHHHHHHHH-CCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCH--HHHHHHHHHcCCChhHE
Confidence 577999999999998 59999999976554 577778889853 332 1 13332 2333322221 3579
Q ss_pred EEEcCCc-cCHHHHHhCCc
Q 004479 662 IMVGEGI-NDAPALAAATV 679 (750)
Q Consensus 662 amvGDG~-NDapAL~~AdV 679 (750)
.||||.. +|..+-++|.+
T Consensus 181 ~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred EEECCCchHHHHHHHHcCC
Confidence 9999997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.06 Score=51.17 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=63.7
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----EEe-cCCHhhHHHHHHHHHhh--cCCeEEE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-----VYC-SLKPEDKLNHVKRTSRD--MGGGLIM 663 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-----v~a-~~~P~~K~~~V~~l~~~--~g~~Vam 663 (750)
.-++||++.+.++.|++ ++++.+.|.=+...+..+-+.+|+.. +++ +-....|-.+.+.+++- .-..+.|
T Consensus 43 ~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEE
Confidence 34579999999999985 69999999999999999999998843 222 12222232255555432 1367999
Q ss_pred EcCCccCHHHHHhCCccE
Q 004479 664 VGEGINDAPALAAATVGI 681 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGI 681 (750)
|||..+|..+-+++.|-|
T Consensus 121 i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPENLIPI 138 (148)
T ss_pred EECCHHHhhcCccCEEEe
Confidence 999999999876665544
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.1 Score=53.01 Aligned_cols=87 Identities=17% Similarity=0.285 Sum_probs=56.8
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH-HHHHHcCCc----eEEecC-------CHhhH--HHHHHHHH---h
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ-RVANAVGIN----EVYCSL-------KPEDK--LNHVKRTS---R 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~-~iA~~~GI~----~v~a~~-------~P~~K--~~~V~~l~---~ 655 (750)
-++.|++.+.++.|++ .|+++.++||-+..... ..-+..|+. .+++.- .|+-. ...++.+. -
T Consensus 77 ~~l~~gv~e~l~~L~~-~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHA-KGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHH-CCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 3578999999999999 69999999998765433 233333443 233322 12211 22223331 1
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccE
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGI 681 (750)
. .+.+.||||...|..|-++|++-.
T Consensus 156 ~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 156 D-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred C-ccceEEEeccHhhHHHHHHCCCeE
Confidence 1 256999999999999999998754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.38 Score=46.63 Aligned_cols=84 Identities=10% Similarity=0.130 Sum_probs=56.4
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCH------------HHHHHHHHHcCCce--EEe-cC--CHhhHHHHHHHHHhhcC
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHE------------SSAQRVANAVGINE--VYC-SL--KPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~------------~tA~~iA~~~GI~~--v~a-~~--~P~~K~~~V~~l~~~~g 658 (750)
-|++.++++.|++ .|+++.++|.-.. .....+-+.+|+.. +++ +- .+.-+.+.++.+.++.|
T Consensus 44 ~pgv~e~L~~Lk~-~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~ 122 (166)
T TIGR01664 44 YPEIPAKLQELDD-EGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAGLYRKPMTGMWEYLQSQYN 122 (166)
T ss_pred cCCHHHHHHHHHH-CCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCccHHHHHHHHHcC
Confidence 4899999999999 6999999997544 24567788899863 221 11 11112334444433324
Q ss_pred -----CeEEEEcCCc--------cCHHHHHhCCcc
Q 004479 659 -----GGLIMVGEGI--------NDAPALAAATVG 680 (750)
Q Consensus 659 -----~~VamvGDG~--------NDapAL~~AdVG 680 (750)
..+.||||.. +|..+-++|++-
T Consensus 123 ~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 123 SPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 5699999986 688888887663
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.00 E-value=4.1 Score=46.73 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.7
Q ss_pred cCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEece
Q 004479 237 VSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGT 274 (750)
Q Consensus 237 ~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~ 274 (750)
+|||...++|..-++.||||-++||+.-||.++=++|.
T Consensus 161 fRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 161 FRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred hccCeeeecceeEEEeccEEEecCCccccccccccCCC
Confidence 57889999999999999999999999999998877764
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.33 Score=46.87 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=61.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC---------------CHHHHHHHHHHcCCc--eEE-e-----cCCH--hhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD---------------HESSAQRVANAVGIN--EVY-C-----SLKP--EDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD---------------~~~tA~~iA~~~GI~--~v~-a-----~~~P--~~K~~ 648 (750)
++-|++.+++++|++ .|+++.++|-- .......+.+..|+. .++ + .... .-|..
T Consensus 29 ~~~pgv~e~L~~L~~-~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~ 107 (161)
T TIGR01261 29 RFEKGVIPALLKLKK-AGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIK 107 (161)
T ss_pred eECCCHHHHHHHHHH-CCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 356899999999999 59999999974 245677888888886 333 2 1111 12234
Q ss_pred HHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEE
Q 004479 649 HVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 649 ~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIa 682 (750)
+++.+.++.| ..+.||||+.+|..+-+.|.+-..
T Consensus 108 ~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 108 LLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 4444443323 459999999999999998887643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.33 Score=52.47 Aligned_cols=90 Identities=10% Similarity=0.179 Sum_probs=72.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH----cCCceEEec--CCHhhHHHHHHHHHhhcC---CeEEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA----VGINEVYCS--LKPEDKLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~----~GI~~v~a~--~~P~~K~~~V~~l~~~~g---~~Vamv 664 (750)
++.+++.++++.|++ .|+.+.++|.-+...|..+-++ +|+.+.|.. ..++.|.+.++.+.++.| ..++||
T Consensus 31 ~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfi 109 (320)
T TIGR01686 31 PLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFI 109 (320)
T ss_pred ccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEE
Confidence 458999999999999 5999999999999999999999 888653322 345567776666655423 679999
Q ss_pred cCCccCHHHHHhCCccEEeC
Q 004479 665 GEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 665 GDG~NDapAL~~AdVGIamg 684 (750)
||-..|..+.+++..++.+-
T Consensus 110 dD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 110 DDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CCCHHHHHHHHHHCCCCccC
Confidence 99999999999998886553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.45 Score=47.31 Aligned_cols=96 Identities=21% Similarity=0.383 Sum_probs=69.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----------------------E----ecCCHhh-
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----------------------Y----CSLKPED- 645 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----------------------~----a~~~P~~- 645 (750)
=|+-|+..++|+.+++.+-..++++|--|..--..+-+..||.+. + |...|..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence 367799999999999964359999999999999999999998521 1 2334433
Q ss_pred -HHHHHHHHHhhc---C---CeEEEEcCCccC-HHHHHhCCccEEeCCCCc
Q 004479 646 -KLNHVKRTSRDM---G---GGLIMVGEGIND-APALAAATVGIVLAQRAS 688 (750)
Q Consensus 646 -K~~~V~~l~~~~---g---~~VamvGDG~ND-apAL~~AdVGIamg~~~s 688 (750)
|..++..++... | .++-++|||.|| +|.++...--++|-..|=
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCC
Confidence 777777776531 1 379999999999 577766655567765443
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.62 Score=47.40 Aligned_cols=89 Identities=12% Similarity=0.163 Sum_probs=62.1
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHc---CC----ceEEe---cCCHhhH--HHHHHHHHhhcCC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV---GI----NEVYC---SLKPEDK--LNHVKRTSRDMGG 659 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI----~~v~a---~~~P~~K--~~~V~~l~~~~g~ 659 (750)
+-++.||+.+++++|++ .|+++.++|..+......+-+.. ++ +.+|. ...|+-. ..+.+++.-. ..
T Consensus 93 ~~~lypgv~e~L~~Lk~-~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~ 170 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQ-LGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PR 170 (220)
T ss_pred ccCcCcCHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hh
Confidence 45789999999999999 69999999999888777776665 33 22222 1223222 2223333222 25
Q ss_pred eEEEEcCCccCHHHHHhCCccEE
Q 004479 660 GLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIa 682 (750)
.+.|+||...|..|-++|++-..
T Consensus 171 e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 171 EILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEE
Confidence 69999999999999999988643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.83 Score=45.42 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 598 GVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 598 ~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
.+...+.+|++ +|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCC
Confidence 57788999999 79999999998888888888888874
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.16 Score=52.62 Aligned_cols=69 Identities=19% Similarity=0.096 Sum_probs=49.2
Q ss_pred EecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC--------CccEEeCCCCcHHHHhhcCEEEecCCCCC
Q 004479 638 YCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA--------TVGIVLAQRASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A--------dVGIamg~~~s~~A~~aADivL~~~~l~~ 706 (750)
..+-.+-+|...++.+.++.+ ..++|+||+.||.+|++.+ ..||+|+. +. .+..|++++ ++...
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~-g~--~~~~A~~~~--~~~~~ 234 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS-GS--KKTVAKFHL--TGPQQ 234 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEec-CC--cCCCceEeC--CCHHH
Confidence 334446689998888876533 4699999999999999988 47888853 21 245688888 45555
Q ss_pred HHHHH
Q 004479 707 VPFCV 711 (750)
Q Consensus 707 l~~~i 711 (750)
+...+
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 55444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.57 Score=58.75 Aligned_cols=110 Identities=17% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-e----EE-e----cCCHhhH--HHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-E----VY-C----SLKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-~----v~-a----~~~P~~K--~~~V~~l~~~~g~~V 661 (750)
.+.|++.+.+++|++ .|+++.++|+-....+..+-++.|+. . ++ + +..|+.. ....+++.-. ...+
T Consensus 161 ~~~pG~~elL~~Lk~-~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~-p~e~ 238 (1057)
T PLN02919 161 IGFPGALELITQCKN-KGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVP-TSEC 238 (1057)
T ss_pred ccCccHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcC-cccE
Confidence 467999999999999 69999999999999999888999984 2 22 1 2233322 2222332222 3569
Q ss_pred EEEcCCccCHHHHHhCCc-cEEeCCC--CcHHHHhhcCEEEecCCCCCH
Q 004479 662 IMVGEGINDAPALAAATV-GIVLAQR--ASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 662 amvGDG~NDapAL~~AdV-GIamg~~--~s~~A~~aADivL~~~~l~~l 707 (750)
.||||..+|+.|-++|.+ -|.+... ..+.....+|+++ +++..+
T Consensus 239 v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 239 VVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 999999999999999987 3334322 2223345678887 555554
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.45 Score=47.30 Aligned_cols=86 Identities=17% Similarity=0.224 Sum_probs=57.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------EE-ecCCHhhHHHHHHHHHhhcC-CeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--------VY-CSLKPEDKLNHVKRTSRDMG-GGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--------v~-a~~~P~~K~~~V~~l~~~~g-~~Vam 663 (750)
++.|++.++++.|++ .+ +.+++|.-+..+....-+.+|+.. ++ ++... -|.++++...++.| ..++|
T Consensus 74 ~~~pG~~e~L~~L~~-~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~ 150 (197)
T PHA02597 74 SAYDDALDVINKLKE-DY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCF 150 (197)
T ss_pred cCCCCHHHHHHHHHh-cC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEE
Confidence 468999999999998 45 566677655555554556666642 21 33332 24555555544434 35889
Q ss_pred EcCCccCHHHHHhC--CccEE
Q 004479 664 VGEGINDAPALAAA--TVGIV 682 (750)
Q Consensus 664 vGDG~NDapAL~~A--dVGIa 682 (750)
|||-.+|..|-++| ++-..
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEE
Confidence 99999999999999 88543
|
2 hypothetical protein; Provisional |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.21 Score=51.77 Aligned_cols=59 Identities=19% Similarity=0.238 Sum_probs=46.6
Q ss_pred EecCCH--hhHHHHHHHHHhhcCCeEEEEcC----CccCHHHHHhC-CccEEeCCCCcHHHHhhcCEE
Q 004479 638 YCSLKP--EDKLNHVKRTSRDMGGGLIMVGE----GINDAPALAAA-TVGIVLAQRASATAIAVADVL 698 (750)
Q Consensus 638 ~a~~~P--~~K~~~V~~l~~~~g~~VamvGD----G~NDapAL~~A-dVGIamg~~~s~~A~~aADiv 698 (750)
+-+..| -+|..-++.|.++ -..|+.+|| |-||.+||+.| -.|+++++ +.+..+..+.++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n-~~~~~~~~~~~~ 244 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN-PEDTIKILKELF 244 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC-HHHHHHHHHHHh
Confidence 335555 4799999999887 678999999 99999999976 68888884 777777666544
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.39 Score=48.31 Aligned_cols=86 Identities=16% Similarity=0.219 Sum_probs=56.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHH--HHHHHHHcCC----ceEEec-----CCHhhHH--HHHHHHHhhcCC
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESS--AQRVANAVGI----NEVYCS-----LKPEDKL--NHVKRTSRDMGG 659 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t--A~~iA~~~GI----~~v~a~-----~~P~~K~--~~V~~l~~~~g~ 659 (750)
-++.|++.+.++.|++ .|+++.++|...... ........|+ +.+++. ..|+-.. ...+++.-. ..
T Consensus 93 ~~~~~~~~~~L~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~-~~ 170 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRA-KGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA-PE 170 (211)
T ss_pred cccChhHHHHHHHHHH-CCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC-HH
Confidence 4578999999999999 599999999865433 3322333454 334432 2344322 222222212 35
Q ss_pred eEEEEcCCccCHHHHHhCCcc
Q 004479 660 GLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVG 680 (750)
.+.||||...|..+-++|++-
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCE
Confidence 689999999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.32 E-value=0.64 Score=51.06 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=49.5
Q ss_pred EecCCHh---hHHHHHHHHHhhcC-----C-eEEEEcCCccCHHHHHh-----CCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 638 YCSLKPE---DKLNHVKRTSRDMG-----G-GLIMVGEGINDAPALAA-----ATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 638 ~a~~~P~---~K~~~V~~l~~~~g-----~-~VamvGDG~NDapAL~~-----AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
+-++.|. +|..-|+.+.+..| . .+.++||+.||-.|++. +++||+||. +.. .-.|++.| ++
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~--~t~A~y~L--~d 365 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPK--ESNAFYSL--RD 365 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCC--CccceEEc--CC
Confidence 3456664 89999999887643 1 25899999999999996 689999985 322 22577877 55
Q ss_pred CCCHHHHHH
Q 004479 704 ISGVPFCVA 712 (750)
Q Consensus 704 l~~l~~~i~ 712 (750)
...+...++
T Consensus 366 p~eV~~~L~ 374 (384)
T PLN02580 366 PSEVMEFLK 374 (384)
T ss_pred HHHHHHHHH
Confidence 555555443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=88.08 E-value=1.8 Score=44.93 Aligned_cols=74 Identities=20% Similarity=0.349 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCcEEEEe-cCCCHHHHHHHHHHcCCceEEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCHH
Q 004479 599 VSDVIAELKDHARLRVMML-TGDHESSAQRVANAVGINEVYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDAP 672 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~ml-TGD~~~tA~~iA~~~GI~~v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDap 672 (750)
..+.-+.|++ .|+++.++ +++. +-...| ..|..-|+.++++.| ..|..+||..||.+
T Consensus 133 ~~~i~~~l~~-~~l~~~~i~s~~~----------------~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~ 195 (247)
T PF05116_consen 133 LEEIRARLRQ-RGLRVNVIYSNGR----------------DLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLE 195 (247)
T ss_dssp HHHHHHHHHC-CTCEEEEEECTCC----------------EEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHH
T ss_pred HHHHHHHHHH-cCCCeeEEEccce----------------eEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHH
Confidence 3444444555 79998766 3432 233334 469999999887643 35777999999999
Q ss_pred HHHhCCccEEeCCCCcHH
Q 004479 673 ALAAATVGIVLAQRASAT 690 (750)
Q Consensus 673 AL~~AdVGIamg~~~s~~ 690 (750)
||..++-||.+|+ +.+.
T Consensus 196 mL~~~~~~vvV~N-a~~e 212 (247)
T PF05116_consen 196 MLEGGDHGVVVGN-AQPE 212 (247)
T ss_dssp HHCCSSEEEE-TT-S-HH
T ss_pred HHcCcCCEEEEcC-CCHH
Confidence 9999999999997 4444
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.54 E-value=1.3 Score=44.81 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=60.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ec-CCHhhH--HHHHHHHHhhcC---CeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CS-LKPEDK--LNHVKRTSRDMG---GGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~-~~P~~K--~~~V~~l~~~~g---~~V 661 (750)
-++.|++.+.++.| ++++.++|+.....+...=+..|+...| +. -....| -++.....++.| ..+
T Consensus 87 ~~~~~gv~~~L~~L----~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 87 LEPIAGANALLESI----TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred CCcCCCHHHHHHHc----CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 35668999998887 3789999999988888888888986433 21 111112 233333333223 569
Q ss_pred EEEcCCccCHHHHHhCCccEEe
Q 004479 662 IMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIam 683 (750)
+||||..+|..+=++|.+-...
T Consensus 163 l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEEEE
Confidence 9999999999999999877653
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=87.33 E-value=0.56 Score=41.38 Aligned_cols=85 Identities=20% Similarity=0.289 Sum_probs=53.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH---HHcCCc----eEEecCCHhhHHHHHHHHHh-hcC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA---NAVGIN----EVYCSLKPEDKLNHVKRTSR-DMG 658 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA---~~~GI~----~v~a~~~P~~K~~~V~~l~~-~~g 658 (750)
|++...+++=|++.++|+.|++ .|++++++|-....+...++ +.+|+. +++.... ...+.|++ ..+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~-----~~~~~l~~~~~~ 80 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM-----AAAEYLKEHKGG 80 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-----HHHHHHHHHTTS
T ss_pred cEeEeCCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-----HHHHHHHhcCCC
Confidence 4455577888999999999999 69999999998755544444 667885 2322211 12333443 237
Q ss_pred CeEEEEcCCccCHHHHHhCC
Q 004479 659 GGLIMVGEGINDAPALAAAT 678 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~Ad 678 (750)
++|.++|.. .....|+.++
T Consensus 81 ~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 81 KKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp SEEEEES-H-HHHHHHHHTT
T ss_pred CEEEEEcCH-HHHHHHHHcC
Confidence 899999975 5555565554
|
... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.06 E-value=1.4 Score=47.47 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=59.4
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH---HHcCCc----eEEecCCHhhHHHHHHHHHhhcCC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA---NAVGIN----EVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA---~~~GI~----~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
|++.-.+.+=|++.++|+.||+ .|++++++|+....+...++ +++|+. +|+....+ ....++...-..++
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~~--~~~~l~~~~~~~~~ 113 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFA--AAAYLKSINFPKDK 113 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHHH--HHHHHHhhccCCCC
Confidence 5666667777999999999999 59999999999977766666 568874 23332221 11222211111134
Q ss_pred eEEEEcCCccCHHHHHhCCccE
Q 004479 660 GLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGI 681 (750)
+ .++++...|..+++.+++=.
T Consensus 114 ~-V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 114 K-VYVIGEEGILEELELAGFQY 134 (311)
T ss_pred E-EEEEcCHHHHHHHHHCCCEE
Confidence 5 45555568899999887643
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.90 E-value=2.6 Score=41.96 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=56.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH-HHcCC----ceEEec-----CCHhhHHHHHHHHHhhc---CCe
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA-NAVGI----NEVYCS-----LKPEDKLNHVKRTSRDM---GGG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA-~~~GI----~~v~a~-----~~P~~K~~~V~~l~~~~---g~~ 660 (750)
++.|++.++++.|++ .|+++.++|.-+.......- +..|+ +.+++. ..|+ .++.+...++. ...
T Consensus 84 ~~~~g~~e~L~~l~~-~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~--p~~~~~~~~~~~~~p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLRE-QGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPE--ARIYQHVLQAEGFSAAD 160 (199)
T ss_pred ccCHHHHHHHHHHHh-CCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCC--HHHHHHHHHHcCCChhH
Confidence 478999999999999 59999999997766554432 22344 233321 2342 33333332221 356
Q ss_pred EEEEcCCccCHHHHHhCCccE
Q 004479 661 LIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGI 681 (750)
+.||||...|..+-++|++-.
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITS 181 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEE
Confidence 899999999998888888743
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=86.52 E-value=3.3 Score=42.27 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=54.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHH---HHHHHHHcCCce---EEecC-CHhh------HHHHHHHHHhhcC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESS---AQRVANAVGINE---VYCSL-KPED------KLNHVKRTSRDMG 658 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t---A~~iA~~~GI~~---v~a~~-~P~~------K~~~V~~l~~~~g 658 (750)
+-|.-|++.+.++.|++ .|++|+++||-.+.. +..--++.|+.. ++-|- .... |.+.=+++.++.-
T Consensus 118 ~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GY 196 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGY 196 (229)
T ss_pred CCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCc
Confidence 34778999999999999 599999999988655 323334568763 34442 1112 6666666666523
Q ss_pred CeEEEEcCCccCH
Q 004479 659 GGLIMVGEGINDA 671 (750)
Q Consensus 659 ~~VamvGDG~NDa 671 (750)
++++.+||-.+|-
T Consensus 197 rIv~~iGDq~sDl 209 (229)
T TIGR01675 197 RIWGNIGDQWSDL 209 (229)
T ss_pred eEEEEECCChHHh
Confidence 5678899988885
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.82 E-value=1.8 Score=42.36 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=57.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-CC--HhhHHHHHHHHHhhcC---CeEEEE
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-LK--PEDKLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-~~--P~~K~~~V~~l~~~~g---~~Vamv 664 (750)
+-|+ .+.++.|++ ++++.++||.....+..+-+..|+.. +++. -. +.-+.++.+...++.| ..+.||
T Consensus 89 ~~~~-~e~L~~L~~--~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 165 (188)
T PRK10725 89 PLPL-IEVVKAWHG--RRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVF 165 (188)
T ss_pred CccH-HHHHHHHHh--CCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 3354 689999986 37999999999999999999999964 3322 11 1112233333332223 458899
Q ss_pred cCCccCHHHHHhCCcc
Q 004479 665 GEGINDAPALAAATVG 680 (750)
Q Consensus 665 GDG~NDapAL~~AdVG 680 (750)
||..+|..+-+.|++-
T Consensus 166 gDs~~di~aA~~aG~~ 181 (188)
T PRK10725 166 EDADFGIQAARAAGMD 181 (188)
T ss_pred eccHhhHHHHHHCCCE
Confidence 9999999999998864
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.25 E-value=2 Score=42.03 Aligned_cols=82 Identities=21% Similarity=0.423 Sum_probs=57.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec---------CCHhhH--HHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS---------LKPEDK--LNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~---------~~P~~K--~~~V~~l~~~~g 658 (750)
++.+++.+++++|+ .++.++|.-+...+..+-+++|+.. +++. ..|+.. ...++.+... .
T Consensus 84 ~~~~g~~~~L~~L~----~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~-~ 158 (184)
T TIGR01993 84 KPDPELRNLLLRLP----GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD-P 158 (184)
T ss_pred CCCHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC-c
Confidence 46789999999886 2588999999999999999999953 4432 244322 2222333222 3
Q ss_pred CeEEEEcCCccCHHHHHhCCcc
Q 004479 659 GGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVG 680 (750)
..+.||||...|..+=++|.+-
T Consensus 159 ~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 159 ERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred cceEEEeCCHHHHHHHHHcCCE
Confidence 5689999999998888887764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.60 E-value=3.1 Score=43.15 Aligned_cols=84 Identities=21% Similarity=0.345 Sum_probs=58.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHc---CCc----eEEecCCHhhHHHHHHHHHhhcCC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV---GIN----EVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI~----~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
|.+.-.+.+=|++.++++.|++ .|++++++|+....+...+++++ |++ +++ +|.. ...+.|++..+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~~~~~L~~~~~~ 83 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY---TSAM--ATADFLRRQEGK 83 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe---cHHH--HHHHHHHhCCCC
Confidence 6666778889999999999999 59999999999998888888774 762 342 3433 333445443256
Q ss_pred eEEEEcCCccCHHHHHhC
Q 004479 660 GLIMVGEGINDAPALAAA 677 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~A 677 (750)
+|.++|.. --...|+.+
T Consensus 84 ~v~~~g~~-~l~~~l~~~ 100 (248)
T PRK10444 84 KAYVIGEG-ALIHELYKA 100 (248)
T ss_pred EEEEEcCH-HHHHHHHHC
Confidence 78888873 223344443
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.59 E-value=8.1 Score=44.29 Aligned_cols=109 Identities=13% Similarity=0.164 Sum_probs=74.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCceEEec-------------------CCHhhHHHHHHHHH
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGINEVYCS-------------------LKPEDKLNHVKRTS 654 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~~v~a~-------------------~~P~~K~~~V~~l~ 654 (750)
+++++.+.+ ++ .|. ++++|+=...-++.+|++ +|++.|.|. +.=++|.+-+++..
T Consensus 111 l~~~a~~~~---~~-~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWRVF---NS-FGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHHHH---Hh-CCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 777766654 45 364 499999999999999987 899865321 23356888887543
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcH-HH--HhhcCEEEecCCCCCHHH
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA-TA--IAVADVLLLRNNISGVPF 709 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~-~A--~~aADivL~~~~l~~l~~ 709 (750)
.. ....-..||..||.|+|+.||-...++...-. .. +--..+|.-|..|..-|.
T Consensus 186 g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~p~ 242 (497)
T PLN02177 186 GD-ALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQRPT 242 (497)
T ss_pred CC-CCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCCCC
Confidence 21 11225789999999999999999999862200 11 113467777777666554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 750 | ||||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-40 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-40 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-37 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 4e-25 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-25 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 4e-21 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-20 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-20 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-19 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 8e-19 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 1e-16 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 7e-08 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-07 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 6e-07 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 7e-07 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-06 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-06 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-04 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-04 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-04 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-04 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-04 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-04 |
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 750 | |||
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-79 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-78 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-78 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-55 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 7e-51 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-48 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-34 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-29 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-17 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 6e-17 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 7e-11 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 1e-09 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 5e-09 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-04 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 5e-09 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-08 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 5e-04 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 8e-04 |
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 5e-79
Identities = 144/495 (29%), Positives = 234/495 (47%), Gaps = 57/495 (11%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
V + +V VG + V GE +PVD EV +G + + +TGE P+ + ++ G N
Sbjct: 239 VSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQ 298
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIG 364
G ++KA +++ L RIVQ+ +AQ ++ +QR D S V + +A++
Sbjct: 299 TGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLAD----TVSGWFVPAVILVAVLS 354
Query: 365 PFLFKWSFIGTSVCRGSVYRALGLMVA----ASPCALAVA-PLAYATAISSCARKGILLK 419
F+ W+ +G ++ L V+ A PCAL +A P++ + A+ G+L+K
Sbjct: 355 -FIV-WALLGPQ---PALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIK 409
Query: 420 GGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEAL 479
+ L+ + +T+ DKTGTLT G I T D E AL
Sbjct: 410 NAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-----------TDDFV------EDNAL 452
Query: 480 AVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKEL 539
A+AAA+E + HP+ A+V + K L S++ FE G+G+ V+G +
Sbjct: 453 ALAAALEHQSEHPLANAIVHAAKEKGLSLGSVEAFEAPTGKGVVGQVDG--------HHV 504
Query: 540 KASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLEDRPRPG 598
++G+ + D + ++A G + A V+ K L+ +ED +
Sbjct: 505 --AIGNARLMQEH--GGDNAPLFEKADELRGKGASVMFMA--VDGKTVALLVVEDPIKSS 558
Query: 599 VSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG 658
+ I EL+ + ++MLTGD + +A+ VA +GI +V + PEDK V +D G
Sbjct: 559 TPETILELQQSG-IEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPEDKSRIVSEL-KDKG 616
Query: 659 GGLIMVGEGINDAPALAAATVGIVLAQRASAT----AIAVADVLLLRNNISGVPFCVAKS 714
+ M G+G+NDAPALA A +GI A T AI A V LL ++ G+ S
Sbjct: 617 LIVAMAGDGVNDAPALAKADIGI-----AMGTGTDVAIESAGVTLLHGDLRGIAKARRLS 671
Query: 715 RQTTSLVKQNVALAL 729
T S ++QN+ A
Sbjct: 672 ESTMSNIRQNLFFAF 686
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 1e-78
Identities = 135/483 (27%), Positives = 222/483 (45%), Gaps = 48/483 (9%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
VPV +V VG ++V GE +PVD V +G + + ++GE P+ GD + G N
Sbjct: 224 VPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINN 283
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIG 364
G + ++AT+ E+ L +IV+L E+A +KP +QR D + + L +A+
Sbjct: 284 TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLAD----KVVAYFIPTVLLVAISA 339
Query: 365 PFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQV 423
F++ W FI + + + ++V A PCA +A P A + A GIL+K
Sbjct: 340 -FIY-WYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADA 397
Query: 424 LDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAA 483
L+ + FDKTGTLT G + P+ G E+E L +AA
Sbjct: 398 LEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-----------------ERELLRLAA 440
Query: 484 AMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASL 543
E+ + HPI A+V ++ + ++ E G G+ A + G K L
Sbjct: 441 IAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILV-----GNKRLMEDF 495
Query: 544 GSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVI 603
G V + E K++ + V A + +I + D + +
Sbjct: 496 G-VAVSNEV---ELALEKLERE------AKTAVIVARN-GRVEGIIAVSDTLKESAKPAV 544
Query: 604 AELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIM 663
ELK ++V M+TGD+ SA+ ++ + ++ V + P K VK+ +
Sbjct: 545 QELKRMG-IKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQA--KEVVAF 601
Query: 664 VGEGINDAPALAAATVGIVLAQRASAT--AIAVADVLLLRNNISGVPFCVAKSRQTTSLV 721
VG+GINDAPALA A +GI + S + A+ D++L+R+++ V + SR+T S +
Sbjct: 602 VGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
Query: 722 KQN 724
KQN
Sbjct: 659 KQN 661
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 263 bits (676), Expect = 2e-78
Identities = 138/490 (28%), Positives = 222/490 (45%), Gaps = 62/490 (12%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
VPV +V VG ++V GE +PVD V +G + + ++GE P+ GD + G N
Sbjct: 146 VPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINN 205
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIG 364
G + ++AT+ E+ L +IV+L E+A +KP +QR D + + L +A+
Sbjct: 206 TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLAD----KVVAYFIPTVLLVAISA 261
Query: 365 PFLFKWSFIGTSVCRGSVYRALGLMVA----ASPCALAVA-PLAYATAISSCARKGILLK 419
F++ W FI + A ++A A PCA +A P A + A GIL+K
Sbjct: 262 -FIY-WYFIAH----APLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIK 315
Query: 420 GGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEAL 479
L+ + FDKTGTLT G + P+ G E+E L
Sbjct: 316 NADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-----------------ERELL 358
Query: 480 AVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKEL 539
+AA E+ + HPI A+V ++ + ++ E G G+ A + G K L
Sbjct: 359 RLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILV-----GNKRL 413
Query: 540 KASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLEDRPRPG 598
G V + E K++ + V A N +V +I + D +
Sbjct: 414 MEDFG-VAVSNEV---ELALEKLERE------AKTAVIVA--RNGRVEGIIAVSDTLKES 461
Query: 599 VSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG 658
+ ELK ++V M+TGD+ SA+ ++ + ++ V + P K VK+
Sbjct: 462 AKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQA--K 518
Query: 659 GGLIMVGEGINDAPALAAATVGIVLAQRASAT----AIAVADVLLLRNNISGVPFCVAKS 714
+ VG+GINDAPALA A +GI A + A+ D++L+R+++ V + S
Sbjct: 519 EVVAFVGDGINDAPALAQADLGI-----AVGSGSDVAVESGDIVLIRDDLRDVVAAIQLS 573
Query: 715 RQTTSLVKQN 724
R+T S +KQN
Sbjct: 574 RKTMSKIKQN 583
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 1e-55
Identities = 72/323 (22%), Positives = 141/323 (43%), Gaps = 67/323 (20%)
Query: 406 TAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTH 465
+ KG+++K V + + TI F+KTGTLT G T
Sbjct: 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYG---------------TPIVTQ 48
Query: 466 DISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTAT 525
I + +LA AA++E ++HPI +A+V ++ + + + + F+ G G+
Sbjct: 49 FIG------DSLSLAYAASVEALSSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGK 102
Query: 526 VNG--IESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVN 583
++ IE + + +NG
Sbjct: 103 ISDKIIEVKKAENN-------NDIAV---------------YINGEPIA----------- 129
Query: 584 EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKP 643
++ D PRP + D + +LK+ L++++L+GD E + ++ + I E Y +L P
Sbjct: 130 ----SFNISDVPRPNLKDYLEKLKN-EGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP 184
Query: 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASAT--AIAVADVLLLR 701
EDK+ +++ + G ++M+G+G+NDA ALA A V + + + + VAD++L+
Sbjct: 185 EDKVRIIEKL-KQNGNKVLMIGDGVNDAAALALADVSVAM---GNGVDISKNVADIILVS 240
Query: 702 NNISGVPFCVAKSRQTTSLVKQN 724
N+I + + ++ ++ + N
Sbjct: 241 NDIGTLLGLIKNRKRLSNAIPSN 263
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 7e-51
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 47/311 (15%)
Query: 419 KGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEA 478
+ Q + + FDKTGTLT G I E E
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS-----------------EDEL 44
Query: 479 LAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKE 538
L +AA++E + HPI A+V+ + + ++ F PG+G+ VNG
Sbjct: 45 LQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVEGIVNG-RRYMVVSPG 103
Query: 539 LKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIHLEDRPRP 597
LG + S+ K + + G+ V N +V+ +I L DR RP
Sbjct: 104 YIRELG-IKTDESVEKLKQQ-------------GKTVVFIL--KNGEVSGVIALADRIRP 147
Query: 598 GVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM 657
+ I++LK ++ MMLTGD+ A+ VA +G+++ + + P +K VK +
Sbjct: 148 ESREAISKLKA-IGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQ-- 204
Query: 658 GGGLIMVGEGINDAPALAAATVGIVLAQRASAT----AIAVADVLLLRNNISGVPFCVAK 713
MVG+G+NDAPALA A VGI A A+ AD++L+RN+ V V
Sbjct: 205 KYVTAMVGDGVNDAPALAQADVGI-----AIGAGTDVAVETADIVLVRNDPRDVAAIVEL 259
Query: 714 SRQTTSLVKQN 724
SR+T S
Sbjct: 260 SRKTYSKFHGL 270
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 1e-48
Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 43/309 (13%)
Query: 412 ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCI 471
A GIL+K L+ + FDKTGTLT G + P+ G
Sbjct: 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------- 59
Query: 472 PNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIES 531
E+E L +AA E+ + HPI A+V ++ + ++ E G G+ A +
Sbjct: 60 ---ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILV-- 114
Query: 532 GTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVT-LIH 590
G K L G V + E K++ + V A N +V +I
Sbjct: 115 ---GNKRLMEDFG-VAVSNEV---ELALEKLERE------AKTAVIVA--RNGRVEGIIA 159
Query: 591 LEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHV 650
+ D + + ELK ++V M+TGD+ SA+ ++ + ++ V + P K V
Sbjct: 160 VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEV 218
Query: 651 KRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASAT--AIAVADVLLLRNNISGVP 708
K+ + VG+GINDAPALA A +GI + S + A+ D++L+R+++ V
Sbjct: 219 KKLQA--KEVVAFVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIRDDLRDVV 273
Query: 709 FCVAKSRQT 717
+ SR+T
Sbjct: 274 AAIQLSRKT 282
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 3e-34
Identities = 118/644 (18%), Positives = 217/644 (33%), Gaps = 119/644 (18%)
Query: 170 VLMAFAAFASIFMGNSLEGGLLLAM--FN-LAHIAEEFFTSRAMVDVKELKENYPDSVLV 226
+M AA + + + ++ G++ + N + +EF V ELK+ +V
Sbjct: 126 FVMEGAAVLAAGLEDWVDFGVICGLLLLNAVVGFVQEFQAGSI---VDELKKTLALKAVV 182
Query: 227 LNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH--LTG 284
L D + + +V G + V G +P D + A + ++ LTG
Sbjct: 183 LR----------DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 285 EVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDE 344
E ++ GD++ + G + T T + + + R L A L+
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 345 FGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCAL-AVAPLA 403
G +V+ L + + + + + + L + + P L AV
Sbjct: 293 IGTILLILVIFTLLIVWVSSFYR------SNPIVQILEF-TLAITIIGVPVGLPAVVTTT 345
Query: 404 YATAISSCARKGILLKGGQVLDA---LASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIR 460
A + A+K +++ L A LA + DKTGTLT L + G
Sbjct: 346 MAVGAAYLAKKKAIVQK---LSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV--- 399
Query: 461 SKKTHDISCCIPNCEKEALAVAAAM----EKGTTHPIGRAVVDHSIGKDLPSVSIDRFEY 516
+ E L + A + +K I +A + + +++
Sbjct: 400 --------------DPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKV 445
Query: 517 -------FPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCK-----SEDESRKIKE 564
+ + A V + G+ + G+ F+ + E+ + K
Sbjct: 446 LQFHPFDPVSKKVVAVVE-----SPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKN 500
Query: 565 AVNGSSYGRGF-VHA-ALSVNEK----VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLT 618
V + RGF A E + ++ D PR + E K L + MLT
Sbjct: 501 KVAEFA-TRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLG-LSIKMLT 558
Query: 619 GDHESSAQRVANAVGINE-----------------------------VYCSLKPEDKLNH 649
GD A+ + +G+ + + P+ K N
Sbjct: 559 GDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNV 618
Query: 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGI-VLAQRASATAIA--VADVLLLRNNISG 706
V+ + G + M G+G+NDAP+L A GI V ++ A AD++ L +
Sbjct: 619 VEIL-QQRGYLVAMTGDGVNDAPSLKKADTGIAV----EGSSDAARSAADIVFLAPGLGA 673
Query: 707 VPFCVAKSRQTTSLVKQNVALALSC----IILASLPSVLGFLPL 746
+ + SRQ + V ++ I L + L
Sbjct: 674 IIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSL 717
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-29
Identities = 109/567 (19%), Positives = 190/567 (33%), Gaps = 99/567 (17%)
Query: 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH--LTGEVKPLEAKVGDRIPGG 300
+ G + + G+ +P D + +G + ++ LTGE P+ G + G
Sbjct: 141 SEQEAAILVPGDIVSIKLGDIIPADARLLEG-DPLKVDQSALTGESLPVTKHPGQEVFSG 199
Query: 301 ARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAI 360
+ G + T + + L + Q+ L G + + + + I
Sbjct: 200 STCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAIGMVI 257
Query: 361 ALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCAL-AVAPLAYATAISSCARKGILLK 419
+I + + G L L++ P A+ V + A +++G + K
Sbjct: 258 EIIVMYPIQ----RRKYRDGIDN-LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 312
Query: 420 GGQVLDA---LASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEK 476
+ A +A + DKTGTLT L + + EK
Sbjct: 313 R---MTAIEEMAGMDVLCSDKTGTLTLNKLSVDK--------------NLVEVFCKGVEK 355
Query: 477 EALAVAAAM--EKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFP---GRGLTATVNGIES 531
+ + + AAM I A+V I + P TA
Sbjct: 356 DQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYI--- 412
Query: 532 GTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGF----VHAALSVNEKVT 587
G + S G+ + I L K+ ++ K ++ RG V A V EK
Sbjct: 413 -DGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAV-ARQVVPEKTK 470
Query: 588 -----------LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE 636
L+ L D PR ++ I + + V M+TGD + + +G+
Sbjct: 471 ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGT 529
Query: 637 ------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGE 666
+ + PE K VK+ ++ + M G+
Sbjct: 530 NMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKL-QERKHIVGMTGD 588
Query: 667 GINDAPALAAATVGI-VLAQRASATAIA--VADVLLLRNNISGVPFCVAKSRQTTSLVKQ 723
G+NDAPAL A +GI V A AT A +D++L +S + V SR +K
Sbjct: 589 GVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKN 644
Query: 724 NVALALSC----IILASLPSVLGFLPL 746
A+S + L +++
Sbjct: 645 YTIYAVSITIRIVFGFMLIALIWEFDF 671
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 77.9 bits (193), Expect = 2e-17
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
V V V+ G I V G PVD V +G + + +TGE P+ K G + G+ N
Sbjct: 37 VDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQ 96
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQ 332
+G +++ AT ++TL++IV+L EEAQ
Sbjct: 97 NGSLLICATHVGADTTLSQIVKLVEEAQ 124
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 6e-17
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNL 304
VPV +V VG ++V GE +PVD V +G + + ++GE P+ GD + G N
Sbjct: 25 VPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINN 84
Query: 305 DGRMILKATKTWNESTLNRIVQLTEEAQ 332
G + ++AT+ E+ L +IV+L E+A
Sbjct: 85 TGVLKIRATRVGGETLLAQIVKLVEDAM 112
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 7e-11
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQG-TATITIEH--LTGE----VKPLEAKVGD 295
+ + D+ G + V G+ VP D + + T+ ++ LTGE +K E
Sbjct: 139 QRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDP 198
Query: 296 RIPGGAR-NL--------DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346
R + N+ G+ + T + + +I + +K LQ+ LDEFG
Sbjct: 199 RAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFG 258
Query: 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVY---RALGLMVAASPCAL-AVAPL 402
EQ SKV+ ++ +A+ LI F G S RG++Y A+ L VAA P L AV
Sbjct: 259 EQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITT 318
Query: 403 AYATAISSCARKGILLKGGQVLDA---LASCHTIAFDKTGTLTT 443
A A+K +++ L + L I DKTGTLTT
Sbjct: 319 CLALGTRRMAKKNAIVRS---LPSVETLGCTSVICSDKTGTLTT 359
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 37/122 (30%)
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE---------------- 636
D PR V I +D A +RV+M+TGD++ +A + +GI
Sbjct: 602 DPPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD 660
Query: 637 ---------------VYCSLKPEDKLNHVKRTSRDMGGGLI--MVGEGINDAPALAAATV 679
+ ++P K V+ I M G+G+NDAPAL A +
Sbjct: 661 DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY---DEITAMTGDGVNDAPALKKAEI 717
Query: 680 GI 681
GI
Sbjct: 718 GI 719
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 3e-10
Identities = 91/664 (13%), Positives = 184/664 (27%), Gaps = 229/664 (34%)
Query: 63 HQHHYH------DHHHHHR----HN--------DCSELSGPQKAVIKFAK---------- 94
H HH+H +H + ++ DC ++ K+++ +
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 95 --ATR---WLDLA------------------NFLREHLQLCCCAAAL----FLAAAA--- 124
T W L+ FL ++ ++ ++
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 125 ------CPYLLPKP-AIKPLQNAFLAVAFPLVGVSASLDALTDIAG-GKVNIHVLMAFAA 176
Y + + L+ A L + P V + + G GK +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELR-PAKNV-----LIDGVLGSGK---TWVALDVC 171
Query: 177 FAS---------IF---MGNSLEGGLLLAMF-NLAHIAEEFFTSRA---------MVDVK 214
+ IF + N +L M L + + +TSR+ + ++
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 215 E------LKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDC 268
+ Y + +LVL +V + + + IL+ D
Sbjct: 232 AELRRLLKSKPYENCLLVL--L-----NVQN---AKA-WNAFNLSCKILLTTRFKQVTDF 280
Query: 269 EVYQGTATITIEH----LT-GEVKPLEAKV----GDRIPGGAR-------NLDGRMILKA 312
T I+++H LT EVK L K +P ++ I
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340
Query: 313 TKTW------NESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAI----AL 362
TW N L I++ + +P R + + L++ A
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVL--EPAEYR------KMF------DRLSVFPPSAH 386
Query: 363 IGPFLFK--WSFIGTSVCRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKG 420
I L W + + ++V + + ++ K
Sbjct: 387 IPTILLSLIWF--------DVIKSDVMVVV------------------NKLHKYSLVEKQ 420
Query: 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALA 480
+ ++ S +I + L + ++I Y KT D IP +
Sbjct: 421 PK--ESTISIPSIYLELKVKLENEYALHRSIVDHY----NIPKTFDSDDLIPPYLDQYFY 474
Query: 481 VAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPG-----RGLTATVNGIESGTEG 535
+H IG H + +R F R L + +
Sbjct: 475 ---------SH-IGH----HLKNIEH----PERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 536 GKELKASLGSV----DFITSLCKSEDE-SRKIKEAVNGSSYGRGFV--HAALSVNEKVT- 587
+ +L + +I C ++ + R + ++ F+ + K T
Sbjct: 517 SGSILNTLQQLKFYKPYI---CDNDPKYERLVNAILD-------FLPKIEENLICSKYTD 566
Query: 588 LIHL 591
L+ +
Sbjct: 567 LLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 6e-06
Identities = 81/648 (12%), Positives = 152/648 (23%), Gaps = 239/648 (36%)
Query: 70 HHHHHRHNDCSELSGPQKAVI-----KFAKATRWLDLANFLREHLQLCCCAAALFLAAAA 124
HHHHH + E K ++ F D+ + + L+
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS-----------ILSKEE 50
Query: 125 CPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGN 184
+++ + L +L F+
Sbjct: 51 IDHIIMSK--DAVSGTLR---------------LFWT--------LLSKQEEMVQKFVEE 85
Query: 185 SLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLP--DVSDLAY 242
L N + + Y + L D+ +VS
Sbjct: 86 VLR-------INYKFLMSPI--KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS---- 132
Query: 243 RSVPVHDV-------EVGSYILV----GAGEAVPVDCEVYQGTATITIEHLTGEVKPLEA 291
R P + +L+ G+G+ + +V L
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW-----------------VALDVC-LSY 174
Query: 292 KVGDRIPG-------GARNLDGRMILKATKTWNESTLN---------RIVQLTEEAQLNK 335
KV ++ N ++ K + N I +
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI---Q 231
Query: 336 PKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPC 395
+L+R L + Y ++VL +V + A L
Sbjct: 232 AELRRLLKS--KPYENCLLVLL------------------NVQNAKAWNAFNL------- 264
Query: 396 ALAVAPLAYATAISSCARKGILL--KGGQVLDALASCHTIAF---DKTGTLTTGGLMFKA 450
SC K ILL + QV D L++ T + TLT +
Sbjct: 265 --------------SC--K-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD----EV 303
Query: 451 IEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHP-----IGRAVVDHSIGKD 505
+ ++ +C + L TT+P I ++ D
Sbjct: 304 KS-LLLKYL-------------DCRPQDLPREVL----TTNPRRLSIIAESIRDG----- 340
Query: 506 LPSVSIDRFEYFPGRGLTATVNGIESGTEG--GKELKA---SLG----SVDFITS--LC- 553
+ ++ + IES E + L S I + L
Sbjct: 341 -----LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-IPTILLSL 394
Query: 554 ----KSEDESRKI-KEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKD 608
+ + + + S E I + ELK
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSL-------VEKQPKESTISIP----------SIYLELKV 437
Query: 609 HARLRVMMLTGDHESSAQRVANAVGINEVYC----SLKPEDK--LNHV 650
+ H + + + I + + D+ +H+
Sbjct: 438 KLENEYAL----H----RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Length = 165 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 1e-09
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 475 EKEALAVAAAMEKGTTHPIGRAVVDH--SIGKDLPSVSIDRFEYFPGRGLTATVNGIESG 532
++ LAV E + HP+G AV + F+ PG G+ V+ +E
Sbjct: 22 LRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGI 81
Query: 533 TEGGKELKASLGSVDFITSLCKSEDESRKIKEAV 566
+ ++ S +E ++ +V
Sbjct: 82 LAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSV 115
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 5e-09
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 31/218 (14%)
Query: 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH--LTGEVKPLE--AKVGDRIP 298
+ + VG + + G+ VP D + Q +++ LTGE +P + P
Sbjct: 188 FQINADQLVVGDLVEMKGGDRVPADIRILQ-AQGRKVDNSSLTGESEPQTRSPECTHESP 246
Query: 299 GGARNL----------DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQ 348
RN+ + + T + + + RI L + K + ++ F +
Sbjct: 247 LETRNIAFFSTMCLEGTAQGL--VVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDI 304
Query: 349 YSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCAL-AVAPLAYATA 407
+ + ++ ++ IG + R V+ + ++VA P L A + +
Sbjct: 305 IAGLAILFGATFFIVA------MCIGYTFLRAMVF-FMAIVVAYVPEGLLATVTVCLSLT 357
Query: 408 ISSCARKGILLKGGQVLDA---LASCHTIAFDKTGTLT 442
A K ++K L+A L S I DKTGTLT
Sbjct: 358 AKRLASKNCVVKN---LEAVETLGSTSVICSDKTGTLT 392
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 588 LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634
L+ + D PR V D + + + A +RV+M+TGDH +A+ +A +VGI
Sbjct: 598 LVSMIDPPRATVPDAVLKCR-TAGIRVIMVTGDHPITAKAIAASVGI 643
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Length = 185 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 5e-09
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 475 EKEALAVAAAMEKGTTHPIGRAVVDH--SIGKDLPSVSIDRFEYFPGRGLTATVNGIESG 532
+ LA+ E + HP+G A+ + + F+ PG G++ V IE
Sbjct: 24 HHKILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGL 83
Query: 533 TEGGKELKASLGSVD 547
+
Sbjct: 84 LHKNNWNIEDNNIKN 98
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 41/223 (18%)
Query: 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH--LTGEVKPLE--AKVGDRIP 298
++ V G + V G+ +P D + +++ LTGE +P + P
Sbjct: 183 STINAEFVVAGDLVEVKGGDRIPADLRIIS-AHGCKVDNSSLTGESEPQTRSPEFSSENP 241
Query: 299 GGARNL----------DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQ 348
RN+ R + T + + + RI L ++ + + ++ F
Sbjct: 242 LETRNIAFFSTNCVEGTARGV--VVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFI-- 297
Query: 349 YSKVVVVLSLAIALIGPFLFKWSFIGTSVCRG-SVYRAL----GLMVAASPCAL-AVAPL 402
++ +++ + + F S+ G S A+ G++VA P L A +
Sbjct: 298 --HIITGVAVFLGVS--------FFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTV 347
Query: 403 AYATAISSCARKGILLKGGQVLDA---LASCHTIAFDKTGTLT 442
ARK L+K L+A L S TI DKTGTLT
Sbjct: 348 CLTLTAKRMARKNCLVKN---LEAVETLGSTSTICSDKTGTLT 387
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 53/168 (31%)
Query: 588 LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI----NEVYCSLKP 643
L+ + D PR V D + + + A ++V+M+TGDH +A+ +A VGI NE +
Sbjct: 593 LMAMIDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAA 651
Query: 644 EDKLNHVKRTSRDMGGGLI----------------------------------------- 662
+ + RD ++
Sbjct: 652 RLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ 711
Query: 663 -------MVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703
+ G+G+ND+PAL A +G+ + S + AD++LL +N
Sbjct: 712 RQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDN 759
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 17/134 (12%), Positives = 45/134 (33%), Gaps = 23/134 (17%)
Query: 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS------------- 640
G ++++ LK+ +V+ +G + + + + ++ + +
Sbjct: 75 PLFEGALELVSALKEKN-YKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLV 133
Query: 641 ----LKPEDKLNHVKRTSRDMGGGL---IMVGEGINDAPALAAATVGIVLAQRASATAIA 693
+ K + R + ++VG+G ND A + I A A
Sbjct: 134 TGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKI--AFNAKEVLKQ 191
Query: 694 VADVLLLRNNISGV 707
A + +++ +
Sbjct: 192 HATHCINEPDLALI 205
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 16/102 (15%)
Query: 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC-------------- 639
+P G + + L++ + V++L+ +Q + +G + C
Sbjct: 69 KPLEGAVEFVDWLRERFQ--VVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY 126
Query: 640 SLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGI 681
L+ +D + + +I G+ ND L+ A GI
Sbjct: 127 QLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 8e-04
Identities = 19/120 (15%), Positives = 31/120 (25%), Gaps = 21/120 (17%)
Query: 438 TGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAV 497
+G P G EK A P GR++
Sbjct: 14 SGHGGRHNRQASEFIPAQGVD----------------EKTLADAAQLASLADETPEGRSI 57
Query: 498 VDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTE-GGKELKASLGSVDFITSLCKSE 556
V K ++ + + T SG + ++ GSVD I ++
Sbjct: 58 VIL--AKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRK--GSVDAIRRHVEAN 113
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 750 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-17 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-15 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 2e-05 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-04 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-04 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 0.001 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 0.002 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 76.4 bits (187), Expect = 9e-17
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 34/150 (22%)
Query: 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE---------------- 636
D PR V I +D A +RV+M+TGD++ +A + +GI
Sbjct: 19 DPPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD 77
Query: 637 ---------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGI 681
+ ++P K V+ M G+G+NDAPAL A +GI
Sbjct: 78 DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA-MTGDGVNDAPALKKAEIGI 136
Query: 682 VLAQRASATAIAVADVLLLRNNISGVPFCV 711
+ +A A ++++L +N S + V
Sbjct: 137 AMGS-GTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 70.1 bits (171), Expect = 6e-15
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 579 ALSVNEKVTL-IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV 637
A+ ++ TL D + + ELK ++V M+TGD+ SA+ ++ + ++ V
Sbjct: 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNLDLV 63
Query: 638 YCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADV 697
+ P K VK+ + VG+GINDAPALA A +GI + S A+ D+
Sbjct: 64 IAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVGS-GSDVAVESGDI 120
Query: 698 LLLRNNISGVPFCV 711
+L+R+++ V +
Sbjct: 121 VLIRDDLRDVVAAI 134
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.4 bits (99), Expect = 2e-05
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 475 EKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTAT 525
E+E L +AA E+ + HPI A+V ++ + ++ E G G+ A
Sbjct: 12 ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD 62
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 41.7 bits (97), Expect = 3e-04
Identities = 33/324 (10%), Positives = 73/324 (22%), Gaps = 68/324 (20%)
Query: 425 DALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAA 484
L I ++ + + K+ ++
Sbjct: 34 CYLGLHSHIDWETLTDNDIQD--IRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLID 91
Query: 485 MEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLG 544
+ K +H A + +L +I L + +
Sbjct: 92 ILKKLSHDEIEAFMYQDEPVELKLQNI-STNLADCFNLNEQLPLQFLDNVKVGKNNIYAA 150
Query: 545 SVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNE-------------KVTLIHL 591
+F T+ D + + + + L K I+
Sbjct: 151 LEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQ 210
Query: 592 ED--RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------- 636
E RP V ++ +LK A + + TG + +G+
Sbjct: 211 EIILRPVDEVKVLLNDLKG-AGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDV 269
Query: 637 -------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDA 671
+ + + + + + +VG+ + D
Sbjct: 270 LEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADL 328
Query: 672 PALAAATVGIVLAQRASATAIAVA 695
+ AQ+ AT I
Sbjct: 329 LS----------AQKIGATFIGTL 342
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 5e-04
Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 30/166 (18%)
Query: 545 SVDFITSLCKSEDESRKI-KEAVNGSSYGRGFVHAALSVNEKVTLIHLED------RPRP 597
+D + +C ED ++ + A+ G+ + + L++ + P
Sbjct: 26 GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTP 85
Query: 598 GVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM 657
G+ ++++ L++ +V +++G S + VA+ + I + + D
Sbjct: 86 GIRELVSRLQERNV-QVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE 144
Query: 658 GGGL----------------------IMVGEGINDAPALAAATVGI 681
IM+G+G D A A I
Sbjct: 145 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFI 190
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (87), Expect = 0.001
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%)
Query: 475 EKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTE 534
EK A P GR++V + + + + TA +
Sbjct: 15 EKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINID 74
Query: 535 GGKELKASLGSVDFITSLCKSE--DESRKIKEAVNG-SSYGRGFVHAALSVNEKVT-LIH 590
K GSVD I ++ + + V+ + G + +V +I
Sbjct: 75 NRMIRK---GSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV--EGSRVLGVIA 129
Query: 591 LEDR 594
L+D
Sbjct: 130 LKDI 133
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 36.6 bits (84), Expect = 0.002
Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 16/101 (15%)
Query: 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQG---TATITIEHLTGEVKPLEAKVGDRIPG 299
+ + D+ G + V G+ VP D + T + LTGE +
Sbjct: 14 QRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDP 73
Query: 300 GARNL-------------DGRMILKATKTWNESTLNRIVQL 327
A N G+ + T + + +I
Sbjct: 74 RAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 750 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.76 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.75 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.32 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.99 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.95 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.93 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.9 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.8 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.76 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.7 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.69 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.68 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.61 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.6 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.56 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.56 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.55 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.41 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.18 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.07 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.99 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 97.99 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.67 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.32 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.21 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.11 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.08 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.97 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.93 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.58 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.18 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.17 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.13 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 95.98 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.6 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.46 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.81 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.74 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.09 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 93.53 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.53 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 90.32 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 89.82 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 89.74 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 89.15 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 88.14 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 87.34 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 84.9 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 81.28 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 81.18 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=3.4e-29 Score=232.79 Aligned_cols=120 Identities=31% Similarity=0.482 Sum_probs=115.9
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC-------------------------------EEEEC
Q ss_conf 18994408999999996299699993599999999999982984-------------------------------69951
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------------EVYCS 640 (750)
Q Consensus 592 ~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~-------------------------------~v~a~ 640 (750)
-||+|++++++|+.||+ +|++++|+|||+..||.++|+++||. .+|+|
T Consensus 18 ~Dp~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp ECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 48896539999999998-84989998999979999999984998876411100034630000127887665532230000
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHH
Q ss_conf 79866999999997504996999959935899998389328849997488986339999269989889999999
Q 004479 641 LKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 641 ~~Pe~K~~~V~~l~~~~g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~~~ 714 (750)
++|+||..+|+.+|++ |++|+|+|||+||+|||++|||||+|+. ++++|+++||++|++++|++++.+|+||
T Consensus 97 ~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~~-gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEETT-SCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHCCEEEEECC-CCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 0114788899998740-4540477067788899985988888655-1199998489999159989999999749
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=3.5e-27 Score=217.70 Aligned_cols=126 Identities=29% Similarity=0.451 Sum_probs=118.0
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 94179999418994408999999996299699993599999999999982984699517986699999999750499699
Q 004479 583 NEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 583 ~~~~G~i~l~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~Pe~K~~~V~~l~~~~g~~V~ 662 (750)
....+.++++|++||+++++|+.||+ +|++++|+|||++.+|.++|++|||+++|++++|++|..+|+.+|+ |+.|+
T Consensus 10 ~~~~~~~g~~D~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~~~~p~~k~~~v~~~q~--~~~v~ 86 (135)
T d2b8ea1 10 KTGTLTKGKPDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQA--KEVVA 86 (135)
T ss_dssp CCCCCBCSCCCCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCHHHHHHHHHHHTT--TSCEE
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC--CCEEE
T ss_conf 91479973688998119999999998-5997999758633555677765422210121102679999999985--99789
Q ss_pred EECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 99599358999983893288499974889863399992699898899999
Q 004479 663 MVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
|+|||+||+|||++|||||+|+. ++++++++||++|++++|++|+.+|+
T Consensus 87 ~vGDg~nD~~aL~~Advgia~~~-~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 87 FVGDGINDAPALAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSSSSHHHHHHSSEEEEECC-C--------SEEESSCCTHHHHHHHC
T ss_pred EEECCCCCHHHHHHCCEEEECCC-CCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf 99678775788974786245376-58789984999997899889999859
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.76 E-value=2e-18 Score=152.14 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=87.8
Q ss_pred CCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCEEEECEE---EEEECCCCCCCCEEEECCC----
Q ss_conf 931999728999987678717998368757799999837972265728996102---4630365698660851158----
Q 004479 222 DSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA---TITIEHLTGEVKPLEAKVG---- 294 (750)
Q Consensus 222 ~~a~v~r~~~~~~~~~~~~~~~~V~~~~l~vGDiI~i~~Ge~VPaDg~vi~G~~---~Vdes~lTGEs~pv~k~~g---- 294 (750)
++++|+|++.+ ..++|++++|+|||+|.+++|++|||||+++++++ .||||+|||||.|+.|.++
T Consensus 1 e~~kV~R~g~~--------~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~ 72 (115)
T d1wpga1 1 EMGKVYRADRK--------SVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPD 72 (115)
T ss_dssp SEEEEEBSSCS--------SCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCC
T ss_pred CCEEEEECCCC--------EEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCC
T ss_conf 92699999984--------5999869998899899999999995156999961262689872000346898741366226
Q ss_pred ---------CCCCCCCEECCEEEEEEEEEECCCCHHHHHHHHH
Q ss_conf ---------8547874000406999999753332899999999
Q 004479 295 ---------DRIPGGARNLDGRMILKATKTWNESTLNRIVQLT 328 (750)
Q Consensus 295 ---------~~v~aGt~~~~G~~~v~v~~~g~~T~~~~i~~l~ 328 (750)
+.+|+||.+.+|.++++|+++|.+|.+++|.+++
T Consensus 73 ~~~~~~~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 73 PRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 5434433334477416898456999999996003889999759
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.75 E-value=4e-22 Score=179.79 Aligned_cols=270 Identities=10% Similarity=-0.014 Sum_probs=160.4
Q ss_pred CHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH-----HHHHHCCCCCCHHH
Q ss_conf 1477741045689985889786794289999713773113677666655787538999999-----99985189994478
Q 004479 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAV-----AAAMEKGTTHPIGR 495 (750)
Q Consensus 421 ~~~lE~L~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----aa~~e~~s~hp~~~ 495 (750)
..+.|.||...++|+|||||+|.++|++..+.. +..... ......+ .+.+++.. .+...+...+|...
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~-~~il~~---~k~~g~n---~~~dl~~~~~~~~~~~~~~~~~~~~~~ 102 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQK-DKILNK---LKSLGLN---SNWDMLFIVFSIHLIDILKKLSHDEIE 102 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTT-THHHHH---HHHTTCC---CHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHCHHHCCCCEEEECCCCCCHHHHHHEEEEECC-HHHHHH---HHHCCCC---HHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 612011256404533765510043311133053-246676---6626888---069999999999999877434898577
Q ss_pred HHHHHHCCC---------CCCCCCCCCEEEECCCEEEEEEECEEECCCCCCEEEECCCCHHHHHHHCCCHH---------
Q ss_conf 998421179---------99986556525655974799992846236897134541586578842036826---------
Q 004479 496 AVVDHSIGK---------DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED--------- 557 (750)
Q Consensus 496 Ai~~~~~~~---------~~~~~~~~~f~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGa~~~i~~~~~~~~--------- 557 (750)
+++...+.. .++.....+|+ +-++.+...... .+..+..+.+|+++.+.-......
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~i~f~--~~~k~~~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 176 (380)
T d1qyia_ 103 AFMYQDEPVELKLQNISTNLADCFNLNEQ--LPLQFLDNVKVG----KNNIYAALEEFATTELHVSDATLFSLKGALWTL 176 (380)
T ss_dssp HHHHCSSCHHHHHTTSGGGCSSCCCCCTT--TTHHHHTTCCSS----HHHHHHHHHHHHHHHTTCSCCGGGSTTCHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCCCCCC--HHHHHHHHHCCC----CCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH
T ss_conf 89877754364089998753655567751--488887653245----531447555213765287588899998689999
Q ss_pred HHHHHHHHH--C---CCCCCCCEEEEEECCCCEEEEEEECCCCC--HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 899999985--0---36789718999610594179999418994--4089999999962996999935999999999999
Q 004479 558 ESRKIKEAV--N---GSSYGRGFVHAALSVNEKVTLIHLEDRPR--PGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN 630 (750)
Q Consensus 558 ~~~~~~~~~--~---~~~~~~~~v~~~~~~~~~~G~i~l~D~lr--~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~ 630 (750)
..+...... . ....+.. .......|++..++++| ++++++++.||+ +|+++.|+|||+..+|+.+++
T Consensus 177 a~~~~r~l~~~~~~~~~~~~~~-----~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~-aGi~v~i~Tg~~~~~a~~il~ 250 (380)
T d1qyia_ 177 AQEVYQEWYLGSKLYEDVEKKI-----ARTTFKTGYIYQEIILRPVDEVKVLLNDLKG-AGFELGIATGRPYTETVVPFE 250 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSC-----CSCSSCCCTTTTCCBSSCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCC-----CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
T ss_conf 9999999877220223345533-----1566754230135653343639999999998-799599988997999999999
Q ss_pred HCCCCE--------------------------------------EEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHH
Q ss_conf 829846--------------------------------------995179866999999997504996999959935899
Q 004479 631 AVGINE--------------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAP 672 (750)
Q Consensus 631 ~~GI~~--------------------------------------v~a~~~Pe~K~~~V~~l~~~~g~~V~mvGDG~NDap 672 (750)
++||.. .+++.+|++|..+++.++.. ++.|+|||||.||+|
T Consensus 251 ~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~-~~~~~~vGD~~~D~~ 329 (380)
T d1qyia_ 251 NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLL 329 (380)
T ss_dssp HHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHH
T ss_pred HCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC-CCEEEEECCCHHHHH
T ss_conf 8199534785058744133311220331102369986999999998088778899999973899-886999889989999
Q ss_pred HHHHCC---CCEEECCCCCHHHHH----HCCEEEECCCCCCHHHHHH
Q ss_conf 998389---328849997488986----3399992699898899999
Q 004479 673 ALAAAT---VGIVLAQRASATAIA----VADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 673 AL~~Ad---VGIamg~~~sd~A~~----aaDivL~~d~l~~i~~~i~ 712 (750)
|++.|+ |||+||..|++.+.+ .||+++ +++..++.++.
T Consensus 330 aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il~ 374 (380)
T d1qyia_ 330 SAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374 (380)
T ss_dssp HHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHHS
T ss_pred HHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 9998799889994588886437789767999998--89999999999
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.32 E-value=7.6e-13 Score=110.27 Aligned_cols=203 Identities=22% Similarity=0.199 Sum_probs=135.3
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH----------HHHHHHHH
Q ss_conf 99645338999825799999999999971999999999988799994899999999999985----------46889999
Q 004479 122 AAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMG----------NSLEGGLL 191 (750)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~~~~L~~ia~~~s~~~g----------~~~~~~~i 191 (750)
..++++.+|.+..+++ |..+.+.+++.. ..++.++++.+++.| .|.++.++
T Consensus 34 ~~~G~N~l~~~~~~s~-------------~~~~~~~~~~~~------~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I 94 (472)
T d1wpga4 34 EKYGHNELPAEEGKSL-------------WELVIEQFEDLL------VRILLLAACISFVLAWFEEGEETITAFVEPFVI 94 (472)
T ss_dssp HHSCCSSCCCCCCCCH-------------HHHHHHHTCSHH------HHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHH
T ss_pred HHCCCCCCCCCCCCCH-------------HHHHHHHHHCHH------HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 8049987999999999-------------999999983899------999999999999999873265320237676663
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCEEE
Q ss_conf 99999777899999989999999986319993199972899998767871799836875779999983797226572899
Q 004479 192 LAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVY 271 (750)
Q Consensus 192 ~~~~~l~~~~~~~~~~rs~~~l~~L~~~~p~~a~v~r~~~~~~~~~~~~~~~~V~~~~l~vGDiI~i~~Ge~VPaDg~vi 271 (750)
+.++.++..+..+++.|+.+.+.++.+..+.. ..||++
T Consensus 95 ~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-----------------------------------~~~~~~------- 132 (472)
T d1wpga4 95 LLILIANAIVGVWQERNAENAIEALKEYEPAA-----------------------------------TEQDKT------- 132 (472)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-----------------------------------CCCCCC-------
T ss_pred HHEEEEEEEEEEEEECHHHHHHHHHHHHCCCC-----------------------------------CCCCCC-------
T ss_conf 11244652577677501777888775212223-----------------------------------566586-------
Q ss_pred ECEEEEEECCCCCCCCEEEECCCCCCCCCCEECCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 61024630365698660851158854787400040699999975333289999999999610896458999999857779
Q 004479 272 QGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSK 351 (750)
Q Consensus 272 ~G~~~Vdes~lTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~T~~~~i~~l~~~a~~~k~~~q~~~~~~a~~~~~ 351 (750)
|.|.+++++++.+..
T Consensus 133 -----------------------------------------------------------------P~d~~l~~~g~~i~~ 147 (472)
T d1wpga4 133 -----------------------------------------------------------------PLQQKLDEFGEQLSK 147 (472)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHH
T ss_conf -----------------------------------------------------------------488899999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 99999999999853433310125---64035689999999996621114269-999999999998739410371477741
Q 004479 352 VVVVLSLAIALIGPFLFKWSFIG---TSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDAL 427 (750)
Q Consensus 352 ~~l~~a~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~vlv~~~P~aL~la-p~a~~~a~~~~~~~gilvk~~~~lE~L 427 (750)
.....+..........+.....+ .......+..++++.+.++|++|+++ +++++.+..+|+|+++++|+..++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~ 227 (472)
T d1wpga4 148 VISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETL 227 (472)
T ss_dssp HHHHHHHHHHHHCCTTSSSCCSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99978799999999999999861046899999999999999986751689999999999999998636606658999999
Q ss_pred CCCCEEEECCC--CCCCCCCEEEEE
Q ss_conf 04568998588--978679428999
Q 004479 428 ASCHTIAFDKT--GTLTTGGLMFKA 450 (750)
Q Consensus 428 ~~v~~i~fDKT--GTLT~g~~~v~~ 450 (750)
|+..+.|.||| +|||.|.+.+..
T Consensus 228 g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 228 GRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998888677640133436999999
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.99 E-value=2.1e-09 Score=84.47 Aligned_cols=73 Identities=19% Similarity=0.127 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHHHC---CCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 9866999999997504---9969999599358999983893288499974889863399992699898899999999
Q 004479 642 KPEDKLNHVKRTSRDM---GGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSR 715 (750)
Q Consensus 642 ~Pe~K~~~V~~l~~~~---g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~~~R 715 (750)
....|...++.+.++. .+.++++|||.||.||++.|++||+|++ +++..++.||+|+.+++..++..++..--
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~n-a~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQ-APKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEECC-CCHHHHHHCCEEECCCCCCHHHHHHHHHH
T ss_conf 77676133201121100133242566267307999997890799889-87999985799989998478999999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.95 E-value=8.9e-09 Score=79.76 Aligned_cols=69 Identities=19% Similarity=0.175 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 8669999999975049---969999599358999983893288499974889863399992699898899999
Q 004479 643 PEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 643 Pe~K~~~V~~l~~~~g---~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
..+|...++.+.++.| ..|+++|||.||.||++.|+.||+|++ +.+..++.||++...++..++..+++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~n-a~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPAN-ATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTT-SCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEECC-CCHHHHHHCCEEECCCCCCHHHHHHH
T ss_conf 6522789998766510023022564488435999997790899889-75999984999989898488999999
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=2.5e-09 Score=83.89 Aligned_cols=112 Identities=19% Similarity=0.338 Sum_probs=90.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE--EEEC-------------------CCHHHHHHHHH
Q ss_conf 89944089999999962996999935999999999999829846--9951-------------------79866999999
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCS-------------------LKPEDKLNHVK 651 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~-------------------~~Pe~K~~~V~ 651 (750)
-+++|++.+.++.||+ .|++++++||.....+..+++.+||+. +++. ..+..|..+++
T Consensus 81 ~~l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~ 159 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 159 (217)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEEEECCCHHHHHHH
T ss_conf 2047779999999973-799799989993588888898709961003665532220000036422246524220899999
Q ss_pred HHHHHCC-CEEEEECCCCCCHHHHHHCCCCEEECCC-CCHHHHHHCCEEEECCCCCCH
Q ss_conf 9975049-9699995993589999838932884999-748898633999926998988
Q 004479 652 RTSRDMG-GGLIMVGEGINDAPALAAATVGIVLAQR-ASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 652 ~l~~~~g-~~V~mvGDG~NDapAL~~AdVGIamg~~-~sd~A~~aaDivL~~d~l~~i 707 (750)
.++.+.+ ..+.|+|||.||.+|++.|+.+||++.. .....++.+|.++ ++|..|
T Consensus 160 ~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~el 215 (217)
T d1nnla_ 160 LLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVEL 215 (217)
T ss_dssp HHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGG
T ss_pred HHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEE--CCHHHH
T ss_conf 99863486663899717865998986892199798777899998689986--898884
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.90 E-value=1.3e-08 Score=78.48 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=88.2
Q ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC---CCEEEEECCCCCCHHHHHHC
Q ss_conf 999999962996999935999999999999829846995179866999999997504---99699995993589999838
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM---GGGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~Pe~K~~~V~~l~~~~---g~~V~mvGDG~NDapAL~~A 677 (750)
.+|+.|++ .|+.+.++||++...+...++++++..++....+.. ..++.+.++. -..|+|+|||+||.|+|+.|
T Consensus 39 ~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~~~~~~~~~~~K~--~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~ 115 (177)
T d1k1ea_ 39 LGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKE--TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAAC 115 (177)
T ss_dssp HHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEEESCSCHH--HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHH-HCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHH--HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHC
T ss_conf 88878765-217899966984467899876321220110136388--899999998667752257705884078999668
Q ss_pred CCCEEECCCCCHHHHHHCCEEEECCCCCC-HHHHHH
Q ss_conf 93288499974889863399992699898-899999
Q 004479 678 TVGIVLAQRASATAIAVADVLLLRNNISG-VPFCVA 712 (750)
Q Consensus 678 dVGIamg~~~sd~A~~aaDivL~~d~l~~-i~~~i~ 712 (750)
.+++||+. +.+.+++.||+|+..+.=.+ +.+++.
T Consensus 116 g~siap~n-A~~~vk~~A~~Vt~~~GG~GavrE~~e 150 (177)
T d1k1ea_ 116 GTSFAVAD-APIYVKNAVDHVLSTHGGKGAFREMSD 150 (177)
T ss_dssp SEEEECTT-SCHHHHTTSSEECSSCTTTTHHHHHHH
T ss_pred CEEEECCC-CCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 92898488-649999858999178899763999999
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.80 E-value=2.4e-08 Score=76.46 Aligned_cols=108 Identities=20% Similarity=0.241 Sum_probs=75.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCHH--HHHHHHHHHHHHCC---CEE
Q ss_conf 9999418994408999999996299699993599999999999982984699517986--69999999975049---969
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPE--DKLNHVKRTSRDMG---GGL 661 (750)
Q Consensus 587 G~i~l~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~Pe--~K~~~V~~l~~~~g---~~V 661 (750)
..+......++......+.... ..--..+.+|.. +.++.|. .|..-++.+.+..| ..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~----------------~ldi~~~~~~K~~ai~~l~~~~gi~~~~v 232 (285)
T d1nrwa_ 170 YNILGFSFFKEKLEAGWKRYEH-AEDLTLVSSAEH----------------NFELSSRKASKGQALKRLAKQLNIPLEET 232 (285)
T ss_dssp EEEEEECSCHHHHHHHHHHHTT-CTTEEEECSSTT----------------EEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred EEEECCCCHHHHHHHHHHHHHC-CCCEEEEEECCC----------------EEEEECCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 0131123218999999998632-797699994796----------------89995554023668988776505572049
Q ss_pred EEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 999599358999983893288499974889863399992699898899999
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 662 ~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
+++|||.||.+||+.|+.|++|++ +++..++.||++...++-.++..+++
T Consensus 233 i~~GD~~ND~~Ml~~a~~svam~n-a~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 233 AAVGDSLNDKSMLEAAGKGVAMGN-AREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEESSGGGHHHHHHSSEEEECTT-CCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEECCHHHHHHHHHCCEEEEECC-CCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 999297888999984891899689-98999985898827887558999999
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=4.1e-08 Score=74.77 Aligned_cols=73 Identities=23% Similarity=0.343 Sum_probs=59.4
Q ss_pred ECCCHH--HHHHHHHHHHHHCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 517986--69999999975049---969999599358999983893288499974889863399992699898899999
Q 004479 639 CSLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 639 a~~~Pe--~K~~~V~~l~~~~g---~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
....|. +|...++.+.+..+ ..++++|||.||.+||+.|+.|++|++ +.+..++.||.+...++=.++.++++
T Consensus 189 ~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~n-a~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 189 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDN-AIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EEECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEECC-CCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 8852788876542000011001142017999186767999985891899679-87999985898838898583999999
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=1.8e-08 Score=77.47 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=61.1
Q ss_pred ECCCHH--HHHHHHHHHHHHCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 517986--69999999975049---969999599358999983893288499974889863399992699898899999
Q 004479 639 CSLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 639 a~~~Pe--~K~~~V~~l~~~~g---~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
-+++|. +|..-++.++++.| ..|.++|||.||.|||+.|+.|++|++ +.+..++.||.+..+++-.++...++
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~N-a~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGN-AAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTT-CCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEECC-CCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 8884586577788887766502142418999088441999985891899589-98999984788818898459999999
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.69 E-value=3.2e-07 Score=68.08 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=83.1
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEE
Q ss_conf 89999713773113677666655787538999999999851899944789984211799998655652565597479999
Q 004479 447 MFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATV 526 (750)
Q Consensus 447 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~e~~s~hp~~~Ai~~~~~~~~~~~~~~~~f~~~~g~g~~~~v 526 (750)
+|+++.+.++. ++++|.+++++|..|+||+++||++++..++.+...+.+|+..+|+|+.+.
T Consensus 1 eVt~i~~~~~~-----------------e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~Gi~g~- 62 (113)
T d2b8ea2 1 EVTDLVPLNGD-----------------ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD- 62 (113)
T ss_dssp EEEEEEESSSC-----------------HHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCCCCCSCEEEETTTEEEET-
T ss_pred CCEEEEECCCC-----------------HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEE-
T ss_conf 93499956999-----------------999999999987768782399999999980578776323166316337868-
Q ss_pred ECEEECCCCCCEEEECCCCHHHHHHHCCCHH-HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEC
Q ss_conf 2846236897134541586578842036826-89999998503678971899961059417999941
Q 004479 527 NGIESGTEGGKELKASLGSVDFITSLCKSED-ESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLE 592 (750)
Q Consensus 527 ~~~~~~~~~~~~~~~~kGa~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~G~i~l~ 592 (750)
.+..|+++++.+.....+ ..+..... ....|.+.++++. +++.+|++++.
T Consensus 63 -------------~v~vG~~~~~~~~~~~~~~~~~~~~~~--~~~~G~T~v~va~-d~~~~G~iala 113 (113)
T d2b8ea2 63 -------------GILVGNKRLMEDFGVAVSNEVELALEK--LEREAKTAVIVAR-NGRVEGIIAVS 113 (113)
T ss_dssp -------------TEEEECHHHHHHTTCCCCHHHHHHHHH--HHTTTCEEEEEEE-TTEEEEEEEEE
T ss_pred -------------EEEECCHHHHHHCCCCCCHHHHHHHHH--HHHCCCEEEEEEE-CCEEEEEEEEC
T ss_conf -------------999776887776099889899999999--9867995999999-99999999979
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.68 E-value=6.9e-09 Score=80.58 Aligned_cols=122 Identities=11% Similarity=0.172 Sum_probs=95.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE-EE-----------------------ECCCHHHHHH
Q ss_conf 89944089999999962996999935999999999999829846-99-----------------------5179866999
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-VY-----------------------CSLKPEDKLN 648 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~-v~-----------------------a~~~Pe~K~~ 648 (750)
-+++|++.+.++.|+++ |+++.++|+-....+..+.+++|+.. ++ +...|+.|..
T Consensus 74 ~~l~pg~~~~l~~L~~~-g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 152 (226)
T d2feaa1 74 AKIREGFREFVAFINEH-EIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS 152 (226)
T ss_dssp CCBCTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred CCHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHH
T ss_conf 34249999999999854-25311577530666999999809950145434798288102201013543255678999999
Q ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHH-HCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 999997504996999959935899998389328849997488986-3399992699898899999999999
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIA-VADVLLLRNNISGVPFCVAKSRQTT 718 (750)
Q Consensus 649 ~V~~l~~~~g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~-aaDivL~~d~l~~i~~~i~~~R~~~ 718 (750)
+++.++.. ++.|.|+||+.||.+|+++||++++++. ..+...+ ..+.+- -++|+.+...+..-....
T Consensus 153 ~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~~-~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~ 220 (226)
T d2feaa1 153 VIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLP-YQDFYEIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECHH-HHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHH
T ss_pred HHHHHCCC-CCEEEEEECCHHHHHHHHHCCEEEEECC-HHHHHHHCCCCEEE-CCCHHHHHHHHHHHHHHH
T ss_conf 99984678-8638998076313999998899787064-67999982998362-499999999999987899
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.61 E-value=1.9e-07 Score=69.84 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=92.4
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEE---------------ECCCHHHHHHHHHHHHHHC
Q ss_conf 8994408999999996299699993599999999999982984699---------------5179866999999997504
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY---------------CSLKPEDKLNHVKRTSRDM 657 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~---------------a~~~Pe~K~~~V~~l~~~~ 657 (750)
.+..+.....++.+++ +.+...+++........+....++...+ ....+..+...++.++..
T Consensus 68 ~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 144 (206)
T d1rkua_ 68 LKPLEGAVEFVDWLRE--RFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL- 144 (206)
T ss_dssp CCCCTTHHHHHHHHHT--TSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT-
T ss_pred CCCCCHHHHHHHHHHC--CCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC-
T ss_conf 2556248899988604--7468885167138888999984783333110256214445432112014578899986425-
Q ss_pred CCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHH
Q ss_conf 996999959935899998389328849997488986339999269989889999999
Q 004479 658 GGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 658 g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~~~ 714 (750)
.+.|+++|||.||.|||+.|++||||+ ...++.++++|++.. ++...+...+...
T Consensus 145 ~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 145 YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHCCCCEEEC-CCHHHHHHCCCCEEE-CCHHHHHHHHHHH
T ss_conf 652188438732799998589409978-977999867895562-6889999999997
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.60 E-value=1.5e-07 Score=70.65 Aligned_cols=72 Identities=22% Similarity=0.372 Sum_probs=61.0
Q ss_pred CCCHH--HHHHHHHHHHHHCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 17986--69999999975049---969999599358999983893288499974889863399992699898899999
Q 004479 640 SLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 640 ~~~Pe--~K~~~V~~l~~~~g---~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
+++|. .|...++.+.++.| ..|+++|||.||.|||+.|++|++|++ +.+.+++.||+++.+++-.++..+++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~n-a~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMEN-AIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTT-SCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECC-CCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 655877751678999988603682208998088440999986890899489-98999985898858887538999999
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=3.8e-07 Score=67.57 Aligned_cols=121 Identities=16% Similarity=0.086 Sum_probs=77.5
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC---CCCCCCE---EEECCC
Q ss_conf 8999971377311367766665578753899999999985189994478998421179999---8655652---565597
Q 004479 447 MFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLP---SVSIDRF---EYFPGR 520 (750)
Q Consensus 447 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~e~~s~hp~~~Ai~~~~~~~~~~---~~~~~~f---~~~~g~ 520 (750)
.+++++|.+|.+ ++++|.+++++|.+|+||+++||+++++.+... ......+ .+....
T Consensus 3 q~td~ip~~G~~----------------~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~ 66 (136)
T d2a29a1 3 QASEFIPAQGVD----------------EKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQS 66 (136)
T ss_dssp EEEEEEECTTCC----------------HHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTT
T ss_pred CCCEEEECCCCC----------------HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 754677379999----------------9999999999727778668999999999855877553110124444543234
Q ss_pred EEEE-EEECEEECCCCCCEEEECCCCHHHHHHHC----C-CHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCC
Q ss_conf 4799-99284623689713454158657884203----6-8268999999850367897189996105941799994189
Q 004479 521 GLTA-TVNGIESGTEGGKELKASLGSVDFITSLC----K-SEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDR 594 (750)
Q Consensus 521 g~~~-~v~~~~~~~~~~~~~~~~kGa~~~i~~~~----~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~G~i~l~D~ 594 (750)
++.. .+++. .+.+|++.++.+.. . ...+.....+. ....|.+.++++. +++.+|++.+.|+
T Consensus 67 ~~~g~~~~g~----------~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~G~Tvv~Va~-d~~~~G~i~l~D~ 133 (136)
T d2a29a1 67 RMSGINIDNR----------MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQ--VARQGATPLVVVE-GSRVLGVIALKDI 133 (136)
T ss_dssp TEEEEEETTE----------EEEEECHHHHHHHHHHHTCCCCHHHHHHHHH--HHHTTSEEEEEEE-TTEEEEEEEEEES
T ss_pred CEEEEEECCE----------EEEECHHHHHHHHHHHCCCCCCHHHHHHHHH--HHHCCCEEEEEEE-CCEEEEEEEEEEE
T ss_conf 2588987897----------9996678999999997189880999999999--9977985999999-9999999999830
Q ss_pred CC
Q ss_conf 94
Q 004479 595 PR 596 (750)
Q Consensus 595 lr 596 (750)
+|
T Consensus 134 iK 135 (136)
T d2a29a1 134 VK 135 (136)
T ss_dssp SC
T ss_pred CC
T ss_conf 58
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.56 E-value=1.5e-07 Score=70.54 Aligned_cols=117 Identities=18% Similarity=0.321 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECC-----------------CHHHHHHHHHHHH
Q ss_conf 18994408999999996299699993599999999999982984699517-----------------9866999999997
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL-----------------KPEDKLNHVKRTS 654 (750)
Q Consensus 592 ~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~-----------------~Pe~K~~~V~~l~ 654 (750)
..++.+++.+.++.++. -|..+.+.||.....+....++.++..++... .+..|...+..+.
T Consensus 73 ~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKN-RGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 00013559999999997-49878763265422223022203204666544211012221233321111234541033578
Q ss_pred HH---CCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHH
Q ss_conf 50---4996999959935899998389328849997488986339999269989889999
Q 004479 655 RD---MGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 655 ~~---~g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i 711 (750)
+. ....+.++|||.||.||++.|++||||+ +.+..++.||+++-++|+..|...+
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~n--a~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHCCCCCCEEEECCCCCHHHHHHHCCCCEEEC--CCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 884666554178637847499999889878999--8999997499999179999999986
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.55 E-value=3.3e-07 Score=67.97 Aligned_cols=68 Identities=21% Similarity=0.318 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHC---CCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCC-HHHHHH
Q ss_conf 66999999997504---9969999599358999983893288499974889863399992699898-899999
Q 004479 644 EDKLNHVKRTSRDM---GGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISG-VPFCVA 712 (750)
Q Consensus 644 e~K~~~V~~l~~~~---g~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~-i~~~i~ 712 (750)
..|...++.+.+.. ...|+++|||.||.+||+.|+.|++|++ +.+.+++.||++...++-.+ +..+++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~n-a~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVAN-ATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTT-CCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECC-CCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 505778887766410020207996487636999985891899689-989999848999998488869999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.41 E-value=1.2e-07 Score=71.17 Aligned_cols=73 Identities=22% Similarity=0.344 Sum_probs=60.6
Q ss_pred ECCCHH--HHHHHHHHHHHHCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 517986--69999999975049---969999599358999983893288499974889863399992699898899999
Q 004479 639 CSLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 639 a~~~Pe--~K~~~V~~l~~~~g---~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
.++.|. .|..-++.+.++.| ..++++|||.||.+||+.|+.|++|++ +++..++.||.|...++-.++..+++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~n-a~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQ-AKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEECC-CCHHHHHHCCEEECCCCCCHHHHHHH
T ss_conf 9997488999999999987322357551676588555999984890899589-98999984797808887568999999
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.18 E-value=1.1e-05 Score=56.53 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=28.1
Q ss_pred CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHH
Q ss_conf 96999959935899998389328849997488986
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIA 693 (750)
Q Consensus 659 ~~V~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~ 693 (750)
..++.+|||.||.+||+.|+.||+|++ ++...++
T Consensus 197 ~~~~a~GD~~ND~~Ml~~a~~~va~~N-a~~~~~~ 230 (243)
T d1wzca1 197 IESYAVGDSYNDFPMFEVVDKVFIVGS-LKHKKAQ 230 (243)
T ss_dssp EEEEEEECSGGGHHHHTTSSEEEEESS-CCCTTCE
T ss_pred CCEEEECCCHHHHHHHHCCCCEEEECC-CCHHHHH
T ss_conf 419998498858999984993899279-9868870
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.07 E-value=1.7e-05 Score=55.21 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=33.2
Q ss_pred EEECCCHHHHHHHHHHHH-HH--CCCEEEEECCCCCCHHHHHHCCCCEEECC
Q ss_conf 995179866999999997-50--49969999599358999983893288499
Q 004479 637 VYCSLKPEDKLNHVKRTS-RD--MGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 637 v~a~~~Pe~K~~~V~~l~-~~--~g~~V~mvGDG~NDapAL~~AdVGIamg~ 685 (750)
+....+-..+.+.+..+. +. .-..++++|||.||.+||+.|++||+|.+
T Consensus 179 ~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~n 230 (232)
T d1xvia_ 179 LDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKG 230 (232)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEEEC
T ss_conf 4788517899999999999759895219998497868999981990899718
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.99 E-value=9.9e-06 Score=56.91 Aligned_cols=110 Identities=11% Similarity=0.138 Sum_probs=67.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCEE-EEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCC---CEE
Q ss_conf 79999418994408999999996299699-99359999999999998298469951798669999999975049---969
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRV-MMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGL 661 (750)
Q Consensus 586 ~G~i~l~D~lr~~~~~aI~~Lk~~~gi~v-~mlTGD~~~tA~~iA~~~GI~~v~a~~~Pe~K~~~V~~l~~~~g---~~V 661 (750)
+......+.......+..+.+++ ..... ...++++ . +.---...+|...++.+.+..| ..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~--~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 117 ISYHLDPQACPTVIDQLTEMLKE-TGIPVQVIFSSGK------------D--VDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp EEEEECTTSCTHHHHHHHHHHHT-SSCCEEEEEETTT------------E--EEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred EEEECCCCCCHHHHHHHHHHHHH-HCCCCEEEECCCC------------E--EEEEECCCCHHHHHHHHHHHCCCCHHHE
T ss_conf 99952521158999999999986-3234126630781------------8--9998676415577888877415773037
Q ss_pred EEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCE-------EEECCCCCCHHHHH
Q ss_conf 999599358999983893288499974889863399-------99269989889999
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRASATAIAVADV-------LLLRNNISGVPFCV 711 (750)
Q Consensus 662 ~mvGDG~NDapAL~~AdVGIamg~~~sd~A~~aaDi-------vL~~d~l~~i~~~i 711 (750)
.++|||.||.|||+.|+.|++|++ +.+..++.||. +-..++..++.+++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~n-a~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l 237 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVRN-AQPELLHWYDQWGDSRHYRAQSSHAGAILEAI 237 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECTT-CCHHHHHHHHHHCCTTEEECSSCHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHCCCEEEECC-CCHHHHHHHHCCCCCCEEECCCCCCCHHHHHH
T ss_conf 997588877999961891899679-99999998632366653771899714899999
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.99 E-value=3.6e-05 Score=52.72 Aligned_cols=108 Identities=10% Similarity=0.044 Sum_probs=66.2
Q ss_pred CCCCHHHHHHHHHCCCCC-------CCCCCCCEEEECCCEEEEEEECEEECCCCCCEEEECCCCHHHHHHHCCCH-----
Q ss_conf 999447899842117999-------98655652565597479999284623689713454158657884203682-----
Q 004479 489 TTHPIGRAVVDHSIGKDL-------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE----- 556 (750)
Q Consensus 489 s~hp~~~Ai~~~~~~~~~-------~~~~~~~f~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGa~~~i~~~~~~~----- 556 (750)
..+|.+.|++.++...+. ....+..+.|.+.++.|+++.... .+++.+++|+|||||.|+++|+..
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~--~~~~~~~~~~KGApe~Il~~C~~~~~~g~ 141 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHERE--DNPQSHVLVMKGAPERILDRCSSILVQGK 141 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECS--SCTTSEEEEEEECHHHHHHTEEEEEETTE
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECC--CCCCCEEEEECCCHHHHHHHHHHEEECCC
T ss_conf 6685999999999995989999986382864685578887789999726--78874347852788999986343534895
Q ss_pred ------HHHHHHHHHH-CCCCCCCCEEEEEECC---------------------C--CEEEEEEECCCCCHH
Q ss_conf ------6899999985-0367897189996105---------------------9--417999941899440
Q 004479 557 ------DESRKIKEAV-NGSSYGRGFVHAALSV---------------------N--EKVTLIHLEDRPRPG 598 (750)
Q Consensus 557 ------~~~~~~~~~~-~~~~~~~~~v~~~~~~---------------------~--~~~G~i~l~D~lr~~ 598 (750)
...+.+.+.. ..+..|.+++.++... . .++|++++.||+|++
T Consensus 142 ~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 142 EIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 300238899999999999740876899999986583225554545701454221798998999988089899
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.67 E-value=1e-04 Score=49.39 Aligned_cols=117 Identities=16% Similarity=0.248 Sum_probs=81.9
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEEC---CCHHHH----HHHHHHHHHH--CCCE
Q ss_conf 9944089999999962996999935999999999999829846----9951---798669----9999999750--4996
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS---LKPEDK----LNHVKRTSRD--MGGG 660 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~---~~Pe~K----~~~V~~l~~~--~g~~ 660 (750)
++-|++.++++.|++++++++.++|+.....+..+.+..|+.. +.+. ..+..+ ...++.+... ..+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~ 170 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 170 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 10685288876541123112235578850000012332012222222222233443454157788876530024877668
Q ss_pred EEEECCCCCCHHHHHHCCC---CEEECCCCCH-HHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 9999599358999983893---2884999748-89863399992699898899999
Q 004479 661 LIMVGEGINDAPALAAATV---GIVLAQRASA-TAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 661 V~mvGDG~NDapAL~~AdV---GIamg~~~sd-~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
+.||||+.+|..|-+.|.+ +|+.|....+ ....-+|+++ ++++.++..+.
T Consensus 171 ~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 171 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 0232487278999998499799980799998899658999998--99999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.32 E-value=0.00018 Score=47.42 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC-----------CCHHHHHHHHHHHHHHCCCEE
Q ss_conf 899440899999999629969999359999999999998298469951-----------798669999999975049969
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------LKPEDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------~~Pe~K~~~V~~l~~~~g~~V 661 (750)
..+.|++.+.++.|++ .|+++.++|+.....+..+.+++|+.+.|.. -.|+--....+.++-. ...+
T Consensus 94 ~~l~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~~~ 171 (224)
T d2hsza1 94 SRLYPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY-PKQI 171 (224)
T ss_dssp CEECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-GGGE
T ss_pred CCHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHCC
T ss_conf 0168899999999850-6874202134528899999986496342143112333454432101357899886431-1002
Q ss_pred EEECCCCCCHHHHHHCCC-CEEEC--CC-CCHHHHHHCCEEEECCCCCCHHHHH
Q ss_conf 999599358999983893-28849--99-7488986339999269989889999
Q 004479 662 IMVGEGINDAPALAAATV-GIVLA--QR-ASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 662 ~mvGDG~NDapAL~~AdV-GIamg--~~-~sd~A~~aaDivL~~d~l~~i~~~i 711 (750)
+||||..+|..+-+.|.+ .|.+. .. ..+....-+|.++ ++++.|+.++
T Consensus 172 ~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 172 LFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred CHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 021176989999999099599991799983406666999998--9999998863
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.21 E-value=0.0012 Score=41.28 Aligned_cols=118 Identities=16% Similarity=0.154 Sum_probs=82.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC--C--------CH--HHHHHHHHHHHHHCCCE
Q ss_conf 899440899999999629969999359999999999998298469951--7--------98--66999999997504996
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS--L--------KP--EDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~--~--------~P--e~K~~~V~~l~~~~g~~ 660 (750)
.++.|++.++++.|++ .|+++.++|+.+......+-+..|+...+.. . .| +.=....+.+.-...+.
T Consensus 98 ~~~~~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~ 176 (257)
T d1swva_ 98 ASPINGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 176 (257)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred CCCCCCHHHHHHHHHH-CCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 8317757999999885-024411017983566888899876401223344555432223458177899999958987651
Q ss_pred EEEECCCCCCHHHHHHCCCC-EEECCCCC-----H---------------------HHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 99995993589999838932-88499974-----8---------------------898633999926998988999999
Q 004479 661 LIMVGEGINDAPALAAATVG-IVLAQRAS-----A---------------------TAIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 661 V~mvGDG~NDapAL~~AdVG-Iamg~~~s-----d---------------------~A~~aaDivL~~d~l~~i~~~i~~ 713 (750)
++||||..+|.-+=+.|.+- |++..+.+ . ....-||+++ +++..|+.++..
T Consensus 177 ~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~~ 254 (257)
T d1swva_ 177 MIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEH 254 (257)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHH
T ss_pred EEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE--CCHHHHHHHHHH
T ss_conf 899968734089999879989998137777898989986279999999999999999747998998--799999999999
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.0014 Score=40.91 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEECC-----------------CHHHHHHHHH
Q ss_conf 89944089999999962996999935999999999999829846----99517-----------------9866999999
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCSL-----------------KPEDKLNHVK 651 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~~-----------------~Pe~K~~~V~ 651 (750)
-++||++++.++.|++. |+.+.++||--......+.+++|++. ++|+- ....|...+.
T Consensus 134 i~Lr~G~~e~~~~l~~~-~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCBCBTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHH
T ss_conf 87663899999999974-97089985873999999999829986574699657997088268603478643456863154
Q ss_pred ----HHHHH-CCCEEEEECCCCCCHHHHHH---CCCCEEEC--CCCC----HHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf ----99750-49969999599358999983---89328849--9974----889863399992699898899999
Q 004479 652 ----RTSRD-MGGGLIMVGEGINDAPALAA---ATVGIVLA--QRAS----ATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 652 ----~l~~~-~g~~V~mvGDG~NDapAL~~---AdVGIamg--~~~s----d~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
.++.. ....+.++|||.||.+|... ++..++.| ...- +.-.++=||||.+|.--.++..+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~il 287 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 287 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf 459988532786768999677768999838854463245431376699879998760797885687846899999
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=6.6e-05 Score=50.76 Aligned_cols=55 Identities=20% Similarity=0.232 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEECC----CCCCHHHHHHCC-CCEEECCCCCHHHHHHCCEEE
Q ss_conf 66999999997504996999959----935899998389-328849997488986339999
Q 004479 644 EDKLNHVKRTSRDMGGGLIMVGE----GINDAPALAAAT-VGIVLAQRASATAIAVADVLL 699 (750)
Q Consensus 644 e~K~~~V~~l~~~~g~~V~mvGD----G~NDapAL~~Ad-VGIamg~~~sd~A~~aaDivL 699 (750)
-.|..-++.|.+.....|.++|| |-||.+||+.|. .|+||++ +.|..+..+|++|
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n-a~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS-PQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS-HHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECCC-HHHHHHHHHHHCC
T ss_conf 02789999996698445999868899999729999717985899189-8999999998619
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.00092 Score=42.16 Aligned_cols=111 Identities=19% Similarity=0.245 Sum_probs=77.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEEC-----CCHH--HHHHHHHHHHHHCCCEE
Q ss_conf 89944089999999962996999935999999999999829846----9951-----7986--69999999975049969
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPE--DKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~Pe--~K~~~V~~l~~~~g~~V 661 (750)
-++.|++.++++.|++ .|+++.++|+.....+..+.+..|+.+ +++. ..|+ -=...++.+.-. .+.+
T Consensus 87 ~~~~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~-~~~~ 164 (218)
T d1te2a_ 87 RPLLPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD-PLTC 164 (218)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC-GGGE
T ss_pred CCCCCHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CHHC
T ss_conf 4456327999887540-3455221332100011122222233322222223232221014578999999972999-5130
Q ss_pred EEECCCCCCHHHHHHCCCC-EEECC--CCCHHHHHHCCEEEECCCCCCH
Q ss_conf 9995993589999838932-88499--9748898633999926998988
Q 004479 662 IMVGEGINDAPALAAATVG-IVLAQ--RASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 662 ~mvGDG~NDapAL~~AdVG-Iamg~--~~sd~A~~aaDivL~~d~l~~i 707 (750)
+||||..+|..|-+.+.+. |.+.. ...+.....+|.++ ++|..+
T Consensus 165 l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 165 VALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred EEEEECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEE--CCHHHC
T ss_conf 89960989999999839979998998776662235899998--992669
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.93 E-value=0.00072 Score=42.94 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCHH--HHHHHHHHHHHHCCCEEEEECCCCCCH
Q ss_conf 994408999999996299699993599999999999982984699517986--699999999750499699995993589
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPE--DKLNHVKRTSRDMGGGLIMVGEGINDA 671 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~Pe--~K~~~V~~l~~~~g~~V~mvGDG~NDa 671 (750)
...+...+.++.+.+..++. ..+|+. +-+..|. +|..-++.+.++ ..+.++||+.||.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~--~~~~~~----------------~idi~p~g~~Kg~al~~l~~~--~~~i~~GDs~ND~ 183 (229)
T d1u02a_ 124 DMKPKLRSRIEEIARIFGVE--TYYGKM----------------IIELRVPGVNKGSAIRSVRGE--RPAIIAGDDATDE 183 (229)
T ss_dssp TTHHHHHHHHHHHHHHHTCE--EEECSS----------------EEEEECTTCCHHHHHHHHHTT--SCEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEE--EEEECE----------------EEEEECCCCCHHHHHHHHHCC--CCCEEECCCCCHH
T ss_conf 45799999999985238769--996021----------------899736989889999997440--4456643888709
Q ss_pred HHHHHCCCCEEECCCCCHHHHHHCCEEEE
Q ss_conf 99983893288499974889863399992
Q 004479 672 PALAAATVGIVLAQRASATAIAVADVLLL 700 (750)
Q Consensus 672 pAL~~AdVGIamg~~~sd~A~~aaDivL~ 700 (750)
+|++.+.-|++|+. |. +...|+..+.
T Consensus 184 ~Mf~~~~~~~av~~-g~--~~~~A~~~~~ 209 (229)
T d1u02a_ 184 AAFEANDDALTIKV-GE--GETHAKFHVA 209 (229)
T ss_dssp HHHHTTTTSEEEEE-SS--SCCCCSEEES
T ss_pred HHHHCCCCEEEEEE-CC--CCCCCEEECC
T ss_conf 99960288289996-89--8766728759
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.58 E-value=0.0031 Score=38.18 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----E-EECCCHHHHHHHHHHHHHHC---CCEEEEE
Q ss_conf 89944089999999962996999935999999999999829846----9-95179866999999997504---9969999
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----V-YCSLKPEDKLNHVKRTSRDM---GGGLIMV 664 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v-~a~~~Pe~K~~~V~~l~~~~---g~~V~mv 664 (750)
.++.+++.+.++.|+. .+ ++.++|+.....++.+.+..|+.. + .+.-.+..|........++. ...+.||
T Consensus 83 ~~~~~~~~~~l~~l~~-~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V 160 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSS-SY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp CEECTTHHHHHHHHHT-TS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCHHHHHHHHHHHHC-CC-CHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
T ss_conf 2210689998754201-34-100002332101157787501233200002223222223332110123320120016465
Q ss_pred CCCCCCHHHHHHCCC-CEEE--CCCCC-HHHHHHCCEEEECCCCCCHHHHH
Q ss_conf 599358999983893-2884--99974-88986339999269989889999
Q 004479 665 GEGINDAPALAAATV-GIVL--AQRAS-ATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 665 GDG~NDapAL~~AdV-GIam--g~~~s-d~A~~aaDivL~~d~l~~i~~~i 711 (750)
||+.||..|-+.|.+ .|++ |.... +.....+|.++ +++..+...+
T Consensus 161 GDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 477789999998599399985798997789768999998--9999999985
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.18 E-value=0.023 Score=31.64 Aligned_cols=116 Identities=20% Similarity=0.308 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEEC-----CCHHHH--HHHHHHHHHHCCCEE
Q ss_conf 89944089999999962996999935999999999999829846----9951-----798669--999999975049969
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~Pe~K--~~~V~~l~~~~g~~V 661 (750)
-++.|++.++++.|++ ++++.++|+........+.+.+|+.+ +++. ..|+-+ ...++.+.-. ...+
T Consensus 99 ~~~~p~~~~~L~~l~~--~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~-p~~~ 175 (230)
T d1x42a1 99 GELYPEVVEVLKSLKG--KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK-GEEA 175 (230)
T ss_dssp CCBCTTHHHHHHHHBT--TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC-GGGE
T ss_pred CCCCCCHHHHHHHHHC--CCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCC
T ss_conf 7510069999987640--376036621322110111012332210022333322223221357788777640664-3126
Q ss_pred EEECCC-CCCHHHHHHCCCCE-EECCC-CCHHHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 999599-35899998389328-84999-748898633999926998988999999
Q 004479 662 IMVGEG-INDAPALAAATVGI-VLAQR-ASATAIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 662 ~mvGDG-~NDapAL~~AdVGI-amg~~-~sd~A~~aaDivL~~d~l~~i~~~i~~ 713 (750)
+||||. .+|.-+-+.|.+-. .+... ......+.+|+++ ++++.++.+++.
T Consensus 176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 228 (230)
T d1x42a1 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVDE 228 (230)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHHH
T ss_pred CEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 45621748679999985998999889998701045899998--899999999997
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.17 E-value=0.019 Score=32.38 Aligned_cols=110 Identities=10% Similarity=0.122 Sum_probs=76.2
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE-------EEE---CCCHHHH--HHHHHHHHHHCCC
Q ss_conf 189944089999999962996999935999999999999829846-------995---1798669--9999999750499
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-------VYC---SLKPEDK--LNHVKRTSRDMGG 659 (750)
Q Consensus 592 ~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~-------v~a---~~~Pe~K--~~~V~~l~~~~g~ 659 (750)
.-.+.|++.+.+++|++ .|+++.++|+............+|+.. .+. ...|+-. ....+.+.-. -.
T Consensus 125 ~~~~~pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~-p~ 202 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCS-TN 202 (253)
T ss_dssp CBCCCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSC-GG
T ss_pred CCCCCCCHHHHHHHHHH-CCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCC-CC
T ss_conf 36668878999999864-24754445898488999999972840433202333024533577808889999994899-67
Q ss_pred EEEEECCCCCCHHHHHHCCCCEEE----CCCCCHHHHHHCCEEEECCCCC
Q ss_conf 699995993589999838932884----9997488986339999269989
Q 004479 660 GLIMVGEGINDAPALAAATVGIVL----AQRASATAIAVADVLLLRNNIS 705 (750)
Q Consensus 660 ~V~mvGDG~NDapAL~~AdVGIam----g~~~sd~A~~aaDivL~~d~l~ 705 (750)
.++||||-.+|.-+-++|.+-... |..........++.++ ++|.
T Consensus 203 ~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i--~sl~ 250 (253)
T d1zs9a1 203 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFS 250 (253)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGG
T ss_pred CEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEE--CCHH
T ss_conf 48999479999999998599799996899899863445788179--9868
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.13 E-value=0.038 Score=30.06 Aligned_cols=115 Identities=23% Similarity=0.354 Sum_probs=72.0
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHH---------------HHHHHHHCCC--C-EEEECCCHHH----------
Q ss_conf 9944089999999962996999935999999---------------9999998298--4-6995179866----------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESS---------------AQRVANAVGI--N-EVYCSLKPED---------- 645 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~t---------------A~~iA~~~GI--~-~v~a~~~Pe~---------- 645 (750)
.+-|++.++++.|++ .|+++.++|...... ........|+ . ..+|...|+.
T Consensus 27 ~~~~gv~e~l~~L~~-~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~ 105 (182)
T d2gmwa1 27 EFIDGVIDAMRELKK-MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCD 105 (182)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCS
T ss_pred EECCCHHHHHHHHHH-CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 688789999999866-1841666642202355666787654010124455554013445405655333466553334555
Q ss_pred --------HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC--EEEC--CCCCHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf --------99999999750499699995993589999838932--8849--9974889863399992699898899999
Q 004479 646 --------KLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVG--IVLA--QRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 646 --------K~~~V~~l~~~~g~~V~mvGDG~NDapAL~~AdVG--Iamg--~~~sd~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
=....+.+.-. -+.+.||||..+|.-|=+.|.++ +.+. ....+.....||.++ +++..++..++
T Consensus 106 ~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 106 CRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp SSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHC
T ss_conf 5687432231012211655-3445122798999999998288847998999777721024798898--99999999963
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.98 E-value=0.012 Score=33.78 Aligned_cols=66 Identities=8% Similarity=-0.023 Sum_probs=43.8
Q ss_pred CCCHHHHHHHHHCCCCCCCC-----------------------CCCCEEEECCCEEEEEEECEEEC-CCCCCEEEECCCC
Q ss_conf 99447899842117999986-----------------------55652565597479999284623-6897134541586
Q 004479 490 THPIGRAVVDHSIGKDLPSV-----------------------SIDRFEYFPGRGLTATVNGIESG-TEGGKELKASLGS 545 (750)
Q Consensus 490 ~hp~~~Ai~~~~~~~~~~~~-----------------------~~~~f~~~~g~g~~~~v~~~~~~-~~~~~~~~~~kGa 545 (750)
..|.+.|++.++...+.... .+..|.|.+.|+.|+++...... ..++.+++|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 89980799999999399757863243033320111455653707888600656627899987489986663159998487
Q ss_pred HHHHHHHCCC
Q ss_conf 5788420368
Q 004479 546 VDFITSLCKS 555 (750)
Q Consensus 546 ~~~i~~~~~~ 555 (750)
||.|+++|+.
T Consensus 158 pe~iL~~C~~ 167 (239)
T d1wpga3 158 PEGVIDRCNY 167 (239)
T ss_dssp HHHHHHTEEE
T ss_pred HHHHHHHCCC
T ss_conf 4999973623
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.60 E-value=0.0086 Score=34.88 Aligned_cols=108 Identities=11% Similarity=0.228 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECC-----------CHHHHHHHHHHHHHHCCCEEE
Q ss_conf 994408999999996299699993599999999999982984699517-----------986699999999750499699
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL-----------KPEDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~-----------~Pe~K~~~V~~l~~~~g~~V~ 662 (750)
++.|++.++++.|++ .|+++.++|+... .+..+-+..|+...|... .|+--..+.+.+.-. -..++
T Consensus 82 ~~~pgv~~~L~~L~~-~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~-p~~~l 158 (204)
T d2go7a1 82 VLMPGAREVLAWADE-SGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLN-SDNTY 158 (204)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCC-GGGEE
T ss_pred CCCCHHHHHHHCCCC-CCCCHHHHCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCEEE
T ss_conf 456347765421102-2220022113510-33443331012212222222223443202578889999982999-75189
Q ss_pred EECCCCCCHHHHHHCCCC-EEECCCCCHHHHHHCCEEEECCCCCCHHHHH
Q ss_conf 995993589999838932-8849997488986339999269989889999
Q 004479 663 MVGEGINDAPALAAATVG-IVLAQRASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG-Iamg~~~sd~A~~aaDivL~~d~l~~i~~~i 711 (750)
||||..+|.-+-+.+.+. |.+.. ++. .+|..+ +++..+..++
T Consensus 159 ~VgD~~~Di~~A~~~G~~~i~v~~-~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 159 YIGDRTLDVEFAQNSGIQSINFLE-STY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp EEESSHHHHHHHHHHTCEEEESSC-CSC----TTEEEC--SSTTHHHHHT
T ss_pred EEECCHHHHHHHHHCCCEEEEECC-CCC----CCCEEC--CCHHHHHHHH
T ss_conf 994798999999986996999847-999----958004--8998999986
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.46 E-value=0.037 Score=30.15 Aligned_cols=115 Identities=16% Similarity=0.274 Sum_probs=77.7
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEE-CCCHHHH------HHHHHHHHHHCCCEEE
Q ss_conf 9944089999999962996999935999999999999829846----995-1798669------9999999750499699
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SLKPEDK------LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~~Pe~K------~~~V~~l~~~~g~~V~ 662 (750)
++.|++.++++.|++ ++++.++|+.+.......-+.+|+.. ++. .-.+..| ..+.+.+.-. ...+.
T Consensus 109 ~~~~~~~~~L~~L~~--~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~-~~~~l 185 (247)
T d2gfha1 109 ILADDVKAMLTELRK--EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ-PGDCV 185 (247)
T ss_dssp CCCHHHHHHHHHHHT--TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCC-GGGEE
T ss_pred CCCCCHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-HHHCC
T ss_conf 658348999998411--460688622320012333320222222222232222221003332478899996028-77524
Q ss_pred EECCCC-CCHHHHHHCCCC-EEECCCCCH---HHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 995993-589999838932-884999748---898633999926998988999999
Q 004479 663 MVGEGI-NDAPALAAATVG-IVLAQRASA---TAIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 663 mvGDG~-NDapAL~~AdVG-Iamg~~~sd---~A~~aaDivL~~d~l~~i~~~i~~ 713 (750)
||||.. +|.-+-+.|.+. +..-..... .....+|+++ +++..|+.+++.
T Consensus 186 ~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 186 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp EEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 203571867999998399499997799887643357999898--999999999999
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.81 E-value=0.0057 Score=36.23 Aligned_cols=110 Identities=14% Similarity=0.186 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC---------CC--HHHHHHHHHHHHHHCCCEEE
Q ss_conf 99440899999999629969999359999999999998298469951---------79--86699999999750499699
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------LK--PEDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------~~--Pe~K~~~V~~l~~~~g~~V~ 662 (750)
++.|++.+.++.|++ ++++.++|+-....+..+.++.|+...|.. .. |+--...++.+.-. -..+.
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~~~~l 158 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA-PQNAL 158 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC-GGGEE
T ss_pred CCCCCHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEE-CCCEE
T ss_conf 346403444332014--554200023211111111122222222222222222222103444300234210451-13406
Q ss_pred EECCCCCCHHHHHHCCCCEEE---CCCCCHHHHHHCCEEEECCCCCCHHH
Q ss_conf 995993589999838932884---99974889863399992699898899
Q 004479 663 MVGEGINDAPALAAATVGIVL---AQRASATAIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIam---g~~~sd~A~~aaDivL~~d~l~~i~~ 709 (750)
||||..+|..+-+.|.+...+ |. .+....+.+|.++ +++..|..
T Consensus 159 ~VgDs~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 159 FIGDSVSDEQTAQAANVDFGLAVWGM-DPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGC-CTTGGGSCCSEEE--SSGGGGGG
T ss_pred EECCCHHHHHHHHHCCCEEEEEECCC-CCHHHHHHCCCEE--CCHHHHHH
T ss_conf 85477878999998499299993588-9756765329274--89999985
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.74 E-value=0.092 Score=27.16 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=67.2
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEEC-CCHHHH--HHHHH-HHHHHCCCEEEEEC
Q ss_conf 9944089999999962996999935999999999999829846----9951-798669--99999-99750499699995
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-LKPEDK--LNHVK-RTSRDMGGGLIMVG 665 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-~~Pe~K--~~~V~-~l~~~~g~~V~mvG 665 (750)
++.|++++.++.|++ .|+++.++|+-+.... .+-+..|+.+ +++. ..+..| .+..+ .+++..-..+.|||
T Consensus 79 ~~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~l~vg 156 (187)
T d2fi1a1 79 ILFEGVSDLLEDISN-QGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIG 156 (187)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEE
T ss_pred CCCCHHHHHHHHHHH-HHCCCCCCCCCCCCHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 024426888887776-4212233455762101-34554202212222122222345688899999999984999769990
Q ss_pred CCCCCHHHHHHCCCCEEECCCCCHHHHHHCCE
Q ss_conf 99358999983893288499974889863399
Q 004479 666 EGINDAPALAAATVGIVLAQRASATAIAVADV 697 (750)
Q Consensus 666 DG~NDapAL~~AdVGIamg~~~sd~A~~aaDi 697 (750)
|..+|.-|=+.|.+-...-. +.+..++.-||
T Consensus 157 Ds~~Di~aA~~aG~~~i~v~-~~~~~~~~~d~ 187 (187)
T d2fi1a1 157 DRPIDIEAGQAAGLDTHLFT-SIVNLRQVLDI 187 (187)
T ss_dssp SSHHHHHHHHHTTCEEEECS-CHHHHHHHHTC
T ss_pred CCHHHHHHHHHCCCEEEEEC-CCCCHHHHCCC
T ss_conf 79999999998599799999-98874753579
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.09 E-value=0.076 Score=27.79 Aligned_cols=85 Identities=9% Similarity=0.078 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHHCCCC----EEEECCCHHHHH--HHHHHHHHHCCCEEEEECC
Q ss_conf 994408999999996299699993599-999999999982984----699517986699--9999997504996999959
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD-HESSAQRVANAVGIN----EVYCSLKPEDKL--NHVKRTSRDMGGGLIMVGE 666 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD-~~~tA~~iA~~~GI~----~v~a~~~Pe~K~--~~V~~l~~~~g~~V~mvGD 666 (750)
++.|++.++++.|++ .|+++.++|.- ....+...-+..++. .+...-.|..+. .+.+.+.-. -+.+.||||
T Consensus 46 ~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~l~igD 123 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQS-LGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVP-FSQMVFFDD 123 (164)
T ss_dssp CCCTTHHHHHHHHHH-TTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCC-GGGEEEEES
T ss_pred CCCHHHHHHHHHHHH-CCCCEEEEECCCCCHHHCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCC-HHHEEEECC
T ss_conf 605579999999997-899489973566210100000002333321023226689769999999996888-699798748
Q ss_pred CCCCHHHHHHCCCC
Q ss_conf 93589999838932
Q 004479 667 GINDAPALAAATVG 680 (750)
Q Consensus 667 G~NDapAL~~AdVG 680 (750)
..+|..+-+.|.+-
T Consensus 124 ~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 124 ENRNIIDVGRLGVT 137 (164)
T ss_dssp CHHHHHHHHTTTCE
T ss_pred CHHHHHHHHHCCCE
T ss_conf 78789999986997
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.53 E-value=0.011 Score=34.00 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHCCCEEEEECC----CCCCHHHHHHCC-CCEEECCCCCHH
Q ss_conf 6999999997504996999959----935899998389-328849997488
Q 004479 645 DKLNHVKRTSRDMGGGLIMVGE----GINDAPALAAAT-VGIVLAQRASAT 690 (750)
Q Consensus 645 ~K~~~V~~l~~~~g~~V~mvGD----G~NDapAL~~Ad-VGIamg~~~sd~ 690 (750)
+|..-++.+.+...+.++++|| |-||.+||+.|. .|+++++ ..|+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~-~~~~ 234 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA-PEDT 234 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS-HHHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECC-HHHH
T ss_conf 7899999984899362999868999999769999715972999079-9999
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.53 E-value=0.31 Score=23.18 Aligned_cols=117 Identities=19% Similarity=0.287 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC-EEEE-C--------------------------------
Q ss_conf 94408999999996299699993599999999999982984-6995-1--------------------------------
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-EVYC-S-------------------------------- 640 (750)
Q Consensus 595 lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~-~v~a-~-------------------------------- 640 (750)
+-|++.++++.+++ -...++++---.+-.+++|+..|+. +.++ +
T Consensus 82 lvpgA~~~lk~l~~--~m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 82 FVPDAEKAMATLQE--RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp BCTTHHHHHHHHHT--TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred ECCCHHHHHHHHHH--HCCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 26888999999986--4884798535899999998535887401002344312478717799998876530375377889
Q ss_pred ---------------------CCHHHHHHHHHHHHHHCC-CEEEEECCCCCCHHHHHHCC--CCEEECCCCCHHHHHHCC
Q ss_conf ---------------------798669999999975049-96999959935899998389--328849997488986339
Q 004479 641 ---------------------LKPEDKLNHVKRTSRDMG-GGLIMVGEGINDAPALAAAT--VGIVLAQRASATAIAVAD 696 (750)
Q Consensus 641 ---------------------~~Pe~K~~~V~~l~~~~g-~~V~mvGDG~NDapAL~~Ad--VGIamg~~~sd~A~~aaD 696 (750)
+--..|..+++..-...+ ..-+.|||.+.|.-+|+.|. =|++++=+|.+-|...||
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~ 239 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 239 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf 99998713115766876402147851678998633612698641236753327899997447983688568624445344
Q ss_pred EEEECCCCCCHHHHHHH
Q ss_conf 99926998988999999
Q 004479 697 VLLLRNNISGVPFCVAK 713 (750)
Q Consensus 697 ivL~~d~l~~i~~~i~~ 713 (750)
+.+.+.+...+..++.+
T Consensus 240 VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 240 VVIISPTAMSEAKVIEL 256 (308)
T ss_dssp EEEECSSTHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHH
T ss_conf 68966633578899999
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.32 E-value=0.12 Score=26.33 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=40.8
Q ss_pred HHHHHHCCCCEEE-ECCCHHHHHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCC-CEEECCC---CCHH--HHHHCCE
Q ss_conf 9999982984699-517986699999999750499699995993-58999983893-2884999---7488--9863399
Q 004479 626 QRVANAVGINEVY-CSLKPEDKLNHVKRTSRDMGGGLIMVGEGI-NDAPALAAATV-GIVLAQR---ASAT--AIAVADV 697 (750)
Q Consensus 626 ~~iA~~~GI~~v~-a~~~Pe~K~~~V~~l~~~~g~~V~mvGDG~-NDapAL~~AdV-GIamg~~---~sd~--A~~aaDi 697 (750)
...-...|..... ..-.|+-=....+.+.-. -+.++||||.. +|..+-+.|.+ +|.+..+ ..++ +...+|+
T Consensus 165 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~ 243 (253)
T d1yv9a1 165 TFVETATQTKPVYIGKPKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243 (253)
T ss_dssp HHHHHHHTCCCEECSTTSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSE
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCC-CCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCE
T ss_conf 00012234303651343126787899984888-44237843782779999998799899989899997889736899978
Q ss_pred EEECCCCC
Q ss_conf 99269989
Q 004479 698 LLLRNNIS 705 (750)
Q Consensus 698 vL~~d~l~ 705 (750)
++ +++.
T Consensus 244 vi--~sl~ 249 (253)
T d1yv9a1 244 VV--DSLD 249 (253)
T ss_dssp EE--SSGG
T ss_pred EE--CCHH
T ss_conf 97--9978
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=89.82 E-value=0.22 Score=24.40 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=75.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCE----EEEC-----CCHH--HHHHHHHHHHHHCCCEE
Q ss_conf 89944089999999962996999935999999999999829846----9951-----7986--69999999975049969
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPE--DKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~Pe--~K~~~V~~l~~~~g~~V 661 (750)
..+.+++.+.++.|++ .++++.++|.-........-+..++.. +++. ..|+ -=....+.+.-. -+.+
T Consensus 92 ~~~~~~~~~~l~~l~~-~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~-p~e~ 169 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKR-RGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD-RSAI 169 (220)
T ss_dssp CEECTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC-GGGE
T ss_pred CCCCCHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC-CCEE
T ss_conf 2212010789998875-1785776421179999998741144553210022210001450778899999981778-7148
Q ss_pred EEECCCCCCHHHHHHCCCCEE-EC--CCCCHHHHHHCCEEEECCCCCCHHHH
Q ss_conf 999599358999983893288-49--99748898633999926998988999
Q 004479 662 IMVGEGINDAPALAAATVGIV-LA--QRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 662 ~mvGDG~NDapAL~~AdVGIa-mg--~~~sd~A~~aaDivL~~d~l~~i~~~ 710 (750)
+||||..+|.-+=+.|.+--. +. +...+.....+|.++ ++|..|+.+
T Consensus 170 l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 170 LFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred EEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHH
T ss_conf 99804837699999869979998179987643368999998--999999854
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=89.74 E-value=0.096 Score=27.01 Aligned_cols=88 Identities=8% Similarity=-0.014 Sum_probs=52.6
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHH----HHHHHHH-------HCCCC--EEEE------CCCHHHHHHHHHH
Q ss_conf 18994408999999996299699993599999----9999999-------82984--6995------1798669999999
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHES----SAQRVAN-------AVGIN--EVYC------SLKPEDKLNHVKR 652 (750)
Q Consensus 592 ~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~----tA~~iA~-------~~GI~--~v~a------~~~Pe~K~~~V~~ 652 (750)
.+++.|++.+.++.|++ .|.++.++|+-+.. |...+.. ..++. ..+. +-.++-|....+.
T Consensus 34 ~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~ 112 (149)
T d1ltqa1 34 TDVINPMVVELSKMYAL-MGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 112 (149)
T ss_dssp GCCBCHHHHHHHHHHHH-TTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 08448789999999984-44808999268578899999999997501333579867986325555667704878999997
Q ss_pred HHHHCCCEEEEECCCCCCHHHHHHCCCC
Q ss_conf 9750499699995993589999838932
Q 004479 653 TSRDMGGGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 653 l~~~~g~~V~mvGDG~NDapAL~~AdVG 680 (750)
+......+++|+||-..|+.|.+.+.+-
T Consensus 113 ~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 113 HIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred HCCCCCCEEEEECCCHHHHHHHHHCCCC
T ss_conf 3257775599986978999999987996
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=89.15 E-value=0.19 Score=24.79 Aligned_cols=83 Identities=20% Similarity=0.309 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCC----HHHHHHHHHHCCCC-----E-EEECCCH--HHHHHHHHHHHHHCCCEEE
Q ss_conf 944089999999962996999935999----99999999982984-----6-9951798--6699999999750499699
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDH----ESSAQRVANAVGIN-----E-VYCSLKP--EDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 595 lr~~~~~aI~~Lk~~~gi~v~mlTGD~----~~tA~~iA~~~GI~-----~-v~a~~~P--e~K~~~V~~l~~~~g~~V~ 662 (750)
+.|++.+.++.++++ |++++-+||.. ..|+..+-+.+|+. . .+.+-.| +.|...|+ +. ++++
T Consensus 87 p~pga~~fl~~~~~~-Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik---~y--~I~l 160 (209)
T d2b82a1 87 PKEVARQLIDMHVRR-GDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQ---DK--NIRI 160 (209)
T ss_dssp ECHHHHHHHHHHHHH-TCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHH---HT--TEEE
T ss_pred CCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHH---HC--CEEE
T ss_conf 662499999999975-97499993884565799999999871987456663476179998237999999---74--9689
Q ss_pred EECCCCCCHHHHHHCCC-CEEE
Q ss_conf 99599358999983893-2884
Q 004479 663 MVGEGINDAPALAAATV-GIVL 683 (750)
Q Consensus 663 mvGDG~NDapAL~~AdV-GIam 683 (750)
++||-.+|..|-..|.+ +|-+
T Consensus 161 ~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 161 FYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp EEESSHHHHHHHHHTTCEEEEC
T ss_pred EECCCHHHHHHHHHCCCCCEEE
T ss_conf 9659888876798759983575
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=88.14 E-value=0.56 Score=21.29 Aligned_cols=113 Identities=14% Similarity=0.233 Sum_probs=74.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEE------------CCCHHHH--HHHHHHHHHHCC
Q ss_conf 89944089999999962996999935999999999999829846995------------1798669--999999975049
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC------------SLKPEDK--LNHVKRTSRDMG 658 (750)
Q Consensus 593 D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a------------~~~Pe~K--~~~V~~l~~~~g 658 (750)
..+.|++.+.+++|+. +..++|+-....+..+-+.+|+...|. +..|.-. ....+.+.-. .
T Consensus 84 ~~~~~g~~~~L~~l~~----~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~-p 158 (222)
T d2fdra1 84 VKIIDGVKFALSRLTT----PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVS-P 158 (222)
T ss_dssp CCBCTTHHHHHHHCCS----CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCC-G
T ss_pred CCHHHHHHHHHHHCCC----CCEEEEECCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC-C
T ss_conf 3113457887651032----3225641204555554302344433210001232112443445889998778750898-7
Q ss_pred CEEEEECCCCCCHHHHHHCCCC-EEECCCC-C------HHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 9699995993589999838932-8849997-4------889863399992699898899999
Q 004479 659 GGLIMVGEGINDAPALAAATVG-IVLAQRA-S------ATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~V~mvGDG~NDapAL~~AdVG-Iamg~~~-s------d~A~~aaDivL~~d~l~~i~~~i~ 712 (750)
+.+.||||..+|.-+=+.|.+- |++.... + +....-+|+++ +++..++.++.
T Consensus 159 ~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 159 DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 3289975878789999984998999836987875317789767999999--99999999999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=87.34 E-value=0.62 Score=20.96 Aligned_cols=122 Identities=12% Similarity=0.100 Sum_probs=65.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------------CHHHHHHHHHHCCCCEEEECCCHHHH--HHHHH
Q ss_conf 79999418994408999999996299699993599------------99999999998298469951798669--99999
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGD------------HESSAQRVANAVGINEVYCSLKPEDK--LNHVK 651 (750)
Q Consensus 586 ~G~i~l~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD------------~~~tA~~iA~~~GI~~v~a~~~Pe~K--~~~V~ 651 (750)
...++...............+.+ .+...+...-| ...-...+....|....+..-.|... ....+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~ 196 (261)
T d1vjra_ 118 FVVLGFDKTLTYERLKKACILLR-KGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISE 196 (261)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHT-TTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHH-CCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 05745776534688999988750-37401224677545578871414520667776531321213667995788888876
Q ss_pred HHHHHCCCEEEEECCCC-CCHHHHHHCCC-CEEECCC-CCHHHHHH----CCEEEECCCCCCHHHHH
Q ss_conf 99750499699995993-58999983893-2884999-74889863----39999269989889999
Q 004479 652 RTSRDMGGGLIMVGEGI-NDAPALAAATV-GIVLAQR-ASATAIAV----ADVLLLRNNISGVPFCV 711 (750)
Q Consensus 652 ~l~~~~g~~V~mvGDG~-NDapAL~~AdV-GIamg~~-~sd~A~~a----aDivL~~d~l~~i~~~i 711 (750)
.+.-. -+.++||||.. +|..+-+.|.+ +|.+..+ .+....+. .|+++ +++..|..++
T Consensus 197 ~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 197 KFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHCCC-CHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHHHHHHH
T ss_conf 64047-2211031687167899999879969998989998778863689998998--8999999976
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=84.90 E-value=0.55 Score=21.35 Aligned_cols=101 Identities=9% Similarity=0.196 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC---------CCHHHHHHHHHHHHHH--CCCE
Q ss_conf 1899440899999999629969999359999999999998298469951---------7986699999999750--4996
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------LKPEDKLNHVKRTSRD--MGGG 660 (750)
Q Consensus 592 ~D~lr~~~~~aI~~Lk~~~gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------~~Pe~K~~~V~~l~~~--~g~~ 660 (750)
..++-|++.+.++.|++ .|+++.++|+... +..+-+..|+...|-. ..|+-. -+-+.+++. ..+.
T Consensus 89 ~~~~~~g~~~~l~~l~~-~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~-~~~~~l~~~~i~~~~ 164 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRS-NKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPD-IFIAAAHAVGVAPSE 164 (221)
T ss_dssp GGGBCTTHHHHHHHHHH-TTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTH-HHHHHHHHTTCCGGG
T ss_pred CCCCCCCCEECCCCCCC-CCCCEEEEEECCH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCE
T ss_conf 22025874010221222-4442489963231--3578876356643331111111111235758-888889873988740
Q ss_pred EEEECCCCCCHHHHHHCCC-CEEECCCCCHHHHHHCCEEE
Q ss_conf 9999599358999983893-28849997488986339999
Q 004479 661 LIMVGEGINDAPALAAATV-GIVLAQRASATAIAVADVLL 699 (750)
Q Consensus 661 V~mvGDG~NDapAL~~AdV-GIamg~~~sd~A~~aaDivL 699 (750)
+.||||..+|.-+-+.|.+ .|+++. ......++.++
T Consensus 165 ~l~VgD~~~di~~A~~aG~~~i~v~~---~~~~~~~~~~~ 201 (221)
T d1o08a_ 165 SIGLEDSQAGIQAIKDSGALPIGVGR---PEDLGDDIVIV 201 (221)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESC---HHHHCSSSEEE
T ss_pred EEEEECCHHHHHHHHHCCCEEEEECC---HHHCCCCCEEC
T ss_conf 79996698889999986998999998---11246564775
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=81.28 E-value=1.1 Score=19.10 Aligned_cols=89 Identities=24% Similarity=0.238 Sum_probs=55.3
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCC--------HHHHH-------HHHHHCC--CCEEEECC---------------
Q ss_conf 9944089999999962996999935999--------99999-------9999829--84699517---------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDH--------ESSAQ-------RVANAVG--INEVYCSL--------------- 641 (750)
Q Consensus 594 ~lr~~~~~aI~~Lk~~~gi~v~mlTGD~--------~~tA~-------~iA~~~G--I~~v~a~~--------------- 641 (750)
.+-|++.++++.|++ .|+++.++|.-. ..... ..-++.| +..++...
T Consensus 48 ~l~pgv~e~L~~L~~-~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (209)
T d2o2xa1 48 VLRPQMLPAIATANR-AGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 126 (209)
T ss_dssp CBCGGGHHHHHHHHH-HTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred EECCCHHHHHHHHHH-HCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 763448999999986-2975798616543214454243444433677777664135532588742464456642123664
Q ss_pred --CHH--HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCC-EEEC
Q ss_conf --986--699999999750499699995993589999838932-8849
Q 004479 642 --KPE--DKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVG-IVLA 684 (750)
Q Consensus 642 --~Pe--~K~~~V~~l~~~~g~~V~mvGDG~NDapAL~~AdVG-Iamg 684 (750)
.|. -=.+..+.+.-. -..+.||||..+|.-|=+.|.+. |.+.
T Consensus 127 ~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 127 MRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp TSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCHHHHHHHHHHCCC-CCCEEEECCCHHHHHHHHHCCCCEEEEE
T ss_conf 0243201566767773899-4126895797889999998799489994
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=81.18 E-value=1.1 Score=19.08 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=41.2
Q ss_pred HHHHHCCCCEE-EECCCHHHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCC-CEEECC-CCCHHHHHH----CCEE
Q ss_conf 99998298469-95179866999999997504996999959935-8999983893-288499-974889863----3999
Q 004479 627 RVANAVGINEV-YCSLKPEDKLNHVKRTSRDMGGGLIMVGEGIN-DAPALAAATV-GIVLAQ-RASATAIAV----ADVL 698 (750)
Q Consensus 627 ~iA~~~GI~~v-~a~~~Pe~K~~~V~~l~~~~g~~V~mvGDG~N-DapAL~~AdV-GIamg~-~~sd~A~~a----aDiv 698 (750)
......+...+ ...-.|+-=....+.+.-. -..++||||..+ |.-+-++|.+ +|.+.. ..+.-..+. +|++
T Consensus 162 ~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~-p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i 240 (250)
T d2c4na1 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI 240 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEE
T ss_pred HHHHHHCCCCHHCCCCHHHHHHHHHHHHCCC-CHHEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEE
T ss_conf 9987502100001342046676666663278-034578468727799999987998999899999988997378999999
Q ss_pred EECCCCCCH
Q ss_conf 926998988
Q 004479 699 LLRNNISGV 707 (750)
Q Consensus 699 L~~d~l~~i 707 (750)
+ +++..|
T Consensus 241 ~--~sl~eL 247 (250)
T d2c4na1 241 Y--PSVAEI 247 (250)
T ss_dssp E--SSGGGC
T ss_pred E--CCHHHH
T ss_conf 8--997893
|