Citrus Sinensis ID: 004553
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 745 | 2.2.26 [Sep-21-2011] | |||||||
| P52732 | 1056 | Kinesin-like protein KIF1 | yes | no | 0.602 | 0.425 | 0.296 | 3e-36 | |
| Q07970 | 793 | Kinesin-1 OS=Arabidopsis | no | no | 0.377 | 0.354 | 0.355 | 3e-35 | |
| P28025 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.553 | 0.386 | 0.292 | 4e-34 | |
| B2GU58 | 1067 | Kinesin-like protein KIF1 | yes | no | 0.553 | 0.386 | 0.296 | 1e-33 | |
| Q6P9P6 | 1052 | Kinesin-like protein KIF1 | yes | no | 0.581 | 0.411 | 0.278 | 3e-33 | |
| F4JGP4 | 790 | Kinesin-5 OS=Arabidopsis | no | no | 0.359 | 0.339 | 0.351 | 8e-33 | |
| Q9D2Z8 | 642 | Kinesin-like protein KIF1 | no | no | 0.546 | 0.633 | 0.275 | 2e-32 | |
| Q14807 | 665 | Kinesin-like protein KIF2 | no | no | 0.365 | 0.409 | 0.302 | 9e-32 | |
| P17120 | 1184 | Kinesin-like protein bimC | yes | no | 0.414 | 0.260 | 0.310 | 9e-32 | |
| Q91783 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.425 | 0.297 | 0.308 | 1e-31 |
| >sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2 | Back alignment and function desciption |
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Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 258/523 (49%), Gaps = 74/523 (14%)
Query: 37 PNSTAKESAPQDHPIEVVGRIRNFPNPNPKEKPSSVLQVNPDKQTLRVR----ADFGYR- 91
PNS+AK+ + I+VV R R F K S+++ +P ++ + VR AD R
Sbjct: 5 PNSSAKKKEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRK 64
Query: 92 DFSLDGVSLSEEEDLDSFYKKFVESRISGVKLGEKCTIMMYGPTGSGKSHTMFGCAKQP- 150
++ D V + + +D Y+ V + V +G CTI YG TG+GK+ TM G + P
Sbjct: 65 TYTFDMVFGASTKQID-VYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEG-ERSPN 122
Query: 151 -----------GIVYKSLKDILGDESDNGEKIGFSTFVQVTVLEIYNEEIYDLLSSNNGG 199
GI+ ++L I +DNG + FS V+V++LEIYNEE++DLL+
Sbjct: 123 EEYTWEEDPLAGIIPRTLHQIFEKLTDNGTE--FS--VKVSLLEIYNEELFDLLN----- 173
Query: 200 GFGIGWPKGSGSKVRLEVMGK-KAKNATFISGIE------AGKISKEIQKVEKRRIVKST 252
P S+ RL++ + K I G+E ++ + ++K +R +T
Sbjct: 174 ------PSSDVSE-RLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAAT 226
Query: 253 QCNERSSRSHCMIILDV----PTVGG-------RLMLVDMAGSENIEQAGQTGFEAKMQT 301
N SSRSH + + + T+ G +L LVD+AGSENI ++G A+ +
Sbjct: 227 LMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAR-EA 285
Query: 302 AKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCASPDPKEIH 361
INQ + L RV+ ++ HVP+R+SKLT +LQDS +++ ++ SP +
Sbjct: 286 GNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSL-GGRTRTSIIATISPASLNLE 344
Query: 362 KTICTLEYGAKAKCIIRGPHTPDKIGAEDSSSAVI--LGSKISAMDQFIYKLQMENKLRE 419
+T+ TLEY +AK I+ P K+ + A+I +I + + + + +N +
Sbjct: 345 ETLSTLEYAHRAKNILNKPEVNQKL----TKKALIKEYTEEIERLKRDLAAAREKNGVYI 400
Query: 420 KERN--EAHDKLLKKEEEVSQLRAKLQLVEEKGSGASEQEINVKVTERTQILKHQLEKKL 477
E N KL +EE++ +L K+ GA E+E+N +VTE K++L++
Sbjct: 401 SEENFRVMSGKLTVQEEQIVELIEKI--------GAVEEELN-RVTELFMDNKNELDQCK 451
Query: 478 EECQRMAEEFVEIERRRMEERILQQQQEVEMLRRRLEEIEFEL 520
+ Q +E E ++ ++E LQ +E E + LE E +L
Sbjct: 452 SDLQNKTQEL-ETTQKHLQETKLQLVKE-EYITSALESTEEKL 492
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Motor protein required for establishing a bipolar spindle. Blocking of KIF11 prevents centrosome migration and arrest cells in mitosis with monoastral microtubule arrays. Homo sapiens (taxid: 9606) |
| >sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P28025|KI11B_XENLA Kinesin-like protein KIF11-B OS=Xenopus laevis GN=kif11-b PE=1 SV=2 | Back alignment and function description |
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| >sp|B2GU58|KIF11_XENTR Kinesin-like protein KIF11 OS=Xenopus tropicalis GN=kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|F4JGP4|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9D2Z8|KIF12_MOUSE Kinesin-like protein KIF12 OS=Mus musculus GN=Kif12 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q14807|KIF22_HUMAN Kinesin-like protein KIF22 OS=Homo sapiens GN=KIF22 PE=1 SV=5 | Back alignment and function description |
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| >sp|P17120|BIMC_EMENI Kinesin-like protein bimC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimC PE=2 SV=2 | Back alignment and function description |
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| >sp|Q91783|KI11A_XENLA Kinesin-like protein KIF11-A OS=Xenopus laevis GN=kif11-a PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 745 | ||||||
| 225433189 | 929 | PREDICTED: kinesin-like protein KIF11-li | 0.991 | 0.795 | 0.689 | 0.0 | |
| 147833016 | 980 | hypothetical protein VITISV_002804 [Viti | 0.940 | 0.715 | 0.726 | 0.0 | |
| 224102201 | 915 | predicted protein [Populus trichocarpa] | 0.977 | 0.795 | 0.705 | 0.0 | |
| 224110598 | 889 | predicted protein [Populus trichocarpa] | 0.965 | 0.808 | 0.715 | 0.0 | |
| 296083682 | 631 | unnamed protein product [Vitis vinifera] | 0.812 | 0.958 | 0.665 | 0.0 | |
| 449458840 | 843 | PREDICTED: kinesin-like protein KIF11-li | 0.961 | 0.849 | 0.681 | 0.0 | |
| 356574762 | 758 | PREDICTED: kinesin-like protein KIF11-li | 0.958 | 0.941 | 0.656 | 0.0 | |
| 255575857 | 911 | Kinesin heavy chain, putative [Ricinus c | 0.930 | 0.760 | 0.646 | 0.0 | |
| 356533763 | 756 | PREDICTED: kinesin-like protein KIF11-li | 0.920 | 0.907 | 0.668 | 0.0 | |
| 297804872 | 869 | hypothetical protein ARALYDRAFT_493473 [ | 0.893 | 0.766 | 0.666 | 0.0 |
| >gi|225433189|ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/795 (68%), Positives = 630/795 (79%), Gaps = 56/795 (7%)
Query: 1 MAPTPSSSSKSNQIL-FKTPQSKHRLNFTSARNT--TPNPNSTAKESAPQDHPIEVVGRI 57
MAPTPSS S Q+ KTP SKHRL+F + T +PNP+S AKE+ P +HP+EV+GRI
Sbjct: 1 MAPTPSSKSNHAQVTQMKTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHPVEVIGRI 60
Query: 58 RNFPNPNPKEKPSSVLQVNPDKQTLRVRADFGYRDFSLDGVSLSEEEDLDSFYKKFVESR 117
R++P+ K+KP S+L +NPD+QT+RVR D GYRDFSLDGVSLSEEED+D FYKKFVESR
Sbjct: 61 RDYPDR--KDKPLSILHINPDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESR 118
Query: 118 ISGVKLGEKCTIMMYGPTGSGKSHTMFGCAKQPGIVYKSLKDILG--DESDNG--EKIGF 173
I+GVK+GEKCTIMMYGPTGSGKSHTMFGC+KQPGIVY+SLKDILG DE ++G +++G
Sbjct: 119 INGVKMGEKCTIMMYGPTGSGKSHTMFGCSKQPGIVYRSLKDILGGADEENDGNEQRVGV 178
Query: 174 STFVQVTVLEIYNEEIYDLLSSNNGGGFGIGWPKGSGSKVRLEVMGKKAKNATFISGIEA 233
TFVQVTVLEIYNEEIYDLLSSN GGG +GW KG SKVRLEVMGKKAKNATFISG EA
Sbjct: 179 GTFVQVTVLEIYNEEIYDLLSSNTGGGLNLGWAKGGSSKVRLEVMGKKAKNATFISGTEA 238
Query: 234 GKISKEIQKVEKRRIVKSTQCNERSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQT 293
GKISKEIQKVEKRRIVKST CN+RSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQT
Sbjct: 239 GKISKEIQKVEKRRIVKSTLCNDRSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQT 298
Query: 294 GFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCA 353
G EAKMQT KINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILM+LCA
Sbjct: 299 GLEAKMQTGKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCA 358
Query: 354 SPDPKEIHKTICTLEYGAKAKCIIRGPHTP--DKIGAEDSSSAVILGSKISAMDQFIYKL 411
SPDPKEIHKTI TLEYGAKAKCI+RGPHTP DK+G EDSSS VILGS+I+AMDQFIYKL
Sbjct: 359 SPDPKEIHKTISTLEYGAKAKCIVRGPHTPVNDKVGTEDSSSGVILGSRIAAMDQFIYKL 418
Query: 412 QMENKLREKERNEAHDKLLKKEEEVSQLRAKLQLVEEKGSGASEQEINVKVTERTQILKH 471
QMENKLREKERNEAH LLKKEEEV+ LRAK++L+E K SG SE+ IN KV ERTQ LKH
Sbjct: 419 QMENKLREKERNEAHKALLKKEEEVAALRAKIELMEGKESGISEEVINFKVNERTQFLKH 478
Query: 472 QLEKKLEECQRMAEEFVEIERRRMEERILQQQQEVEMLRRRLEEIEFELCHSR--DRDVR 529
+LEKKL+ECQ MA EFVE+ R+RMEE+ILQQQQEVE+LR RLEEIE EL SR + V
Sbjct: 479 ELEKKLQECQSMANEFVELGRKRMEEKILQQQQEVELLRYRLEEIESELFFSRSINGKVN 538
Query: 530 SSKDLDGSSFARRLMGIYADEDPGMVKSMDLDMGDVEPFVRDLKHVDRPVHQQDNNEIQG 589
S+DL+G+ FA+RL+ IYADEDPGMVKSMDLDMGD EP+VRD++H+DR VHQ +NN QG
Sbjct: 539 VSRDLEGNGFAKRLVEIYADEDPGMVKSMDLDMGDQEPYVRDVRHIDRGVHQLNNNVNQG 598
Query: 590 WL----QKTSNEIDEHEVFASKYGDKVCLSTVFEEEEIEDEEDDHKDSAED-EVEKVIIE 644
+L Q NE + +VFA+KYGD+VCLSTVFE+EE +E+++HK + ED EV K IIE
Sbjct: 599 FLNHLHQNILNEEVDDDVFAAKYGDRVCLSTVFEDEE-AEEDEEHKGNLEDEEVMKEIIE 657
Query: 645 EKRVCSSGLADGNIPSLNLTTGLLASSP------------QKPE---DTESSRRLRIQNI 689
EK VCS G+ DG+ +N TG +SSP +PE D SSRR RIQNI
Sbjct: 658 EKTVCSGGM-DGSGLKINFNTGSFSSSPLNLEKLVGSGLVSEPENAKDAASSRRKRIQNI 716
Query: 690 FTLCGNNRELSQHTRT---------PTVSSV----------PMVEPVMAL--ASKENYNP 728
FTLCGN RE+S HT+ P S V + E ++ + + EN NP
Sbjct: 717 FTLCGNQREISHHTKVAPGRCETFDPQSSPVKKTGDDSATTTLPEELLQVQKSGSENLNP 776
Query: 729 SSKSTDVQVEVYAAF 743
++ T EVY +
Sbjct: 777 VNEDTGAMTEVYVKW 791
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147833016|emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224102201|ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|222852407|gb|EEE89954.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224110598|ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|222864611|gb|EEF01742.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296083682|emb|CBI23671.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449458840|ref|XP_004147154.1| PREDICTED: kinesin-like protein KIF11-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356574762|ref|XP_003555514.1| PREDICTED: kinesin-like protein KIF11-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255575857|ref|XP_002528826.1| Kinesin heavy chain, putative [Ricinus communis] gi|223531738|gb|EEF33560.1| Kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356533763|ref|XP_003535429.1| PREDICTED: kinesin-like protein KIF11-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297804872|ref|XP_002870320.1| hypothetical protein ARALYDRAFT_493473 [Arabidopsis lyrata subsp. lyrata] gi|297316156|gb|EFH46579.1| hypothetical protein ARALYDRAFT_493473 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 745 | ||||||
| TAIR|locus:2129630 | 869 | AT4G14330 [Arabidopsis thalian | 0.630 | 0.540 | 0.736 | 2.5e-210 | |
| UNIPROTKB|P28025 | 1067 | kif11-b "Kinesin-like protein | 0.555 | 0.388 | 0.297 | 4.1e-32 | |
| TAIR|locus:2127378 | 793 | ATK1 "kinesin 1" [Arabidopsis | 0.377 | 0.354 | 0.358 | 4.4e-32 | |
| UNIPROTKB|E1BF29 | 1055 | KIF11 "Uncharacterized protein | 0.573 | 0.404 | 0.298 | 4.5e-32 | |
| UNIPROTKB|P52732 | 1056 | KIF11 "Kinesin-like protein KI | 0.573 | 0.404 | 0.296 | 5.3e-32 | |
| UNIPROTKB|E2QXT6 | 1052 | KIF11 "Uncharacterized protein | 0.570 | 0.403 | 0.299 | 1.2e-31 | |
| UNIPROTKB|F1SC89 | 1059 | KIF11 "Uncharacterized protein | 0.573 | 0.403 | 0.289 | 3.7e-31 | |
| WB|WBGene00000257 | 963 | bmk-1 [Caenorhabditis elegans | 0.543 | 0.420 | 0.308 | 3.9e-31 | |
| UNIPROTKB|B2GU58 | 1067 | kif11 "Kinesin-like protein KI | 0.557 | 0.388 | 0.294 | 6.2e-31 | |
| TAIR|locus:2077132 | 1058 | AT3G45850 [Arabidopsis thalian | 0.493 | 0.347 | 0.298 | 6.6e-31 |
| TAIR|locus:2129630 AT4G14330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1815 (644.0 bits), Expect = 2.5e-210, Sum P(2) = 2.5e-210
Identities = 360/489 (73%), Positives = 415/489 (84%)
Query: 1 MAPTPSSSSKSNQI---LFKTPQSKHRLNFTSARNTTPNPNSTAKESAPQDHPIEVVGRI 57
MAPTPSSS +SNQ L +TPQ+K RLNF S TPNP+ + K+ +P +HP+EV+GRI
Sbjct: 1 MAPTPSSS-RSNQTQYTLIRTPQTKQRLNFHSK---TPNPDGS-KDPSPPEHPVEVIGRI 55
Query: 58 RNFPNPNPKEKPSSVLQVNPDKQTLRVRADFGYRDFSLDGVSLSEEEDLDSFYKKFVESR 117
R++P+ KEK S+LQVN D QT+RVRAD GYRDF+LDGVS SE+E L+ FYKKF+E R
Sbjct: 56 RDYPDR--KEKSPSILQVNTDNQTVRVRADVGYRDFTLDGVSFSEQEGLEEFYKKFIEER 113
Query: 118 ISGVKLGEKCTIMMYGPTGSGKSHTMFGCAKQPGIVYKSLKDILGDESDNGEKIGFSTFV 177
I GVK+G KCTIMMYGPTG+GKSHTMFGC K+PGIVY+SL+DILGD +G TFV
Sbjct: 114 IKGVKVGNKCTIMMYGPTGAGKSHTMFGCGKEPGIVYRSLRDILGDSDQDGV-----TFV 168
Query: 178 QVTVLEIYNEEIYDLLSSNNGGGFGIGWPKGSGSKVRLEVMGKKAKNATFISGIEAGKIS 237
QVTVLE+YNEEIYDLLS+N+ GIGWPKG+ +KVRLEVMGKKAKNA+FISG EAGKIS
Sbjct: 169 QVTVLEVYNEEIYDLLSTNSSNNLGIGWPKGASTKVRLEVMGKKAKNASFISGTEAGKIS 228
Query: 238 KEIQKVEKRRIVKSTQCNERSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQTGFEA 297
KEI KVEKRRIVKST CNERSSRSHC+IILDVPTVGGRLMLVDMAGSENI+QAGQTGFEA
Sbjct: 229 KEIVKVEKRRIVKSTLCNERSSRSHCIIILDVPTVGGRLMLVDMAGSENIDQAGQTGFEA 288
Query: 298 KMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCASPDP 357
KMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILM+LCASPDP
Sbjct: 289 KMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDP 348
Query: 358 KEIHKTICTLEYGAKAKCIIRGPHTP--DKIGAEDSSSAVILGSKISAMDQFIYKLQMEN 415
KE+HKT+CTLEYGAKAKCI+RG HTP DK G ++S+SAVILGS+I+AMD+FI KLQ E
Sbjct: 349 KEMHKTLCTLEYGAKAKCIVRGSHTPNKDKYGGDESASAVILGSRIAAMDEFIIKLQSEK 408
Query: 416 KLREKERNEAHDKLLKKEEEVSQLRAKLQLVEEKGSGASEQEINVKVTERTQILKHQLEK 475
K +EKERNEA +L KKEEEV+ LR+ L + + +E+EI KV ERTQ+LK +L+K
Sbjct: 409 KQKEKERNEAQKQLKKKEEEVAALRSLL--TQREACATNEEEIKEKVNERTQLLKSELDK 466
Query: 476 KLEECQRMA 484
KLEEC+RMA
Sbjct: 467 KLEECRRMA 475
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| UNIPROTKB|P28025 kif11-b "Kinesin-like protein KIF11-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127378 ATK1 "kinesin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BF29 KIF11 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P52732 KIF11 "Kinesin-like protein KIF11" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QXT6 KIF11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SC89 KIF11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| WB|WBGene00000257 bmk-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B2GU58 kif11 "Kinesin-like protein KIF11" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
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| TAIR|locus:2077132 AT3G45850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.VIII.210.1 | hypothetical protein (915 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 745 | |||
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 6e-86 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 7e-85 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 5e-81 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 2e-59 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 1e-48 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 3e-44 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 5e-44 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-41 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 2e-41 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 9e-39 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 1e-38 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 5e-37 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 5e-36 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 2e-35 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 4e-34 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 9e-28 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 2e-25 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-19 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 2e-15 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 3e-04 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 5e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 7e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.002 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.002 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.003 | |
| pfam07888 | 546 | pfam07888, CALCOCO1, Calcium binding and coiled-co | 0.003 |
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 6e-86
Identities = 112/342 (32%), Positives = 162/342 (47%), Gaps = 31/342 (9%)
Query: 50 PIEVVGRIRNFPNPNPKEKPSSVLQVNPDKQTL----RVRADFGYRDFSLDGVSLSEEED 105
I VV RIR N + S + V+ +K + G + F+ D V
Sbjct: 1 NIRVVVRIRPL-NGRESKSEESCITVDDNKTVTLTPPKDGRKAGPKSFTFDHV-FDPNST 58
Query: 106 LDSFYKKFVESRISGVKLGEKCTIMMYGPTGSGKSHTMFGCAKQPGIVYKSLKDILGDES 165
+ Y+ + + V G TI YG TGSGK++TMFG K PGI+ ++L+D+ +
Sbjct: 59 QEDVYETTAKPLVESVLEGYNGTIFAYGQTGSGKTYTMFGSPKDPGIIPRALEDLF-NLI 117
Query: 166 DNGEKIGFSTFVQVTVLEIYNEEIYDLLSSNNGGGFGIGWPKGSGSKVR-LEVMGKKAKN 224
D ++ S V V+ LEIYNE++YDLLS P +R G K
Sbjct: 118 DERKEKNKSFSVSVSYLEIYNEKVYDLLSPE---------PPSKPLSLREDPKGGVYVKG 168
Query: 225 ATFISGIEAGKISKEIQKVEKRRIVKSTQCNERSSRSHCMIILDVPTVG----------G 274
T + A +QK K R ST NERSSRSH + + V
Sbjct: 169 LTEVEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHAIFTIHVEQRNTTNDGRSIKSS 228
Query: 275 RLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGD--SHVPFRDSKL 332
+L LVD+AGSE ++ G G + + IN+ AL V+ ++++G H+P+RDSKL
Sbjct: 229 KLNLVDLAGSERAKKTGAEG-DRLKEAKNINKSLSALGNVISALSSGQKKKHIPYRDSKL 287
Query: 333 TMLLQDSFEDDKSKILMVLCASPDPKEIHKTICTLEYGAKAK 374
T LLQDS SK LM+ SP + +T+ TL + ++AK
Sbjct: 288 TRLLQDSLG-GNSKTLMIANISPSSENYDETLSTLRFASRAK 328
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 328 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain (CALCOCO1) like | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 745 | |||
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 96.97 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 95.95 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 95.48 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 93.94 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 93.34 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 93.11 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 92.94 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 92.81 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 92.77 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 92.55 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 92.23 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 91.77 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 91.69 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 91.53 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 91.44 | |
| KOG3647 | 338 | consensus Predicted coiled-coil protein [General f | 91.21 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 90.78 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 90.63 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 90.07 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 89.78 | |
| PRK11637 | 428 | AmiB activator; Provisional | 89.59 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 89.51 | |
| PRK09039 | 343 | hypothetical protein; Validated | 89.33 | |
| PRK06620 | 214 | hypothetical protein; Validated | 89.26 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 89.22 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 89.21 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 88.88 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 88.71 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 88.68 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 88.45 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 88.36 | |
| PRK12377 | 248 | putative replication protein; Provisional | 88.36 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 88.21 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 88.19 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 88.1 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 88.04 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 87.41 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 87.38 | |
| PRK08116 | 268 | hypothetical protein; Validated | 87.35 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 87.21 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 87.16 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 86.93 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 86.92 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 86.86 | |
| PRK09039 | 343 | hypothetical protein; Validated | 86.84 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 86.83 | |
| PRK11637 | 428 | AmiB activator; Provisional | 86.81 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 86.72 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 86.41 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 86.33 | |
| PF01486 | 100 | K-box: K-box region; InterPro: IPR002487 MADS gene | 86.17 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 86.05 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 85.88 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 85.87 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 85.7 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 85.6 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 85.51 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 85.22 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 85.17 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 85.13 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 84.94 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 84.85 | |
| PRK09087 | 226 | hypothetical protein; Validated | 84.68 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 84.41 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 84.25 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 84.14 | |
| PRK06526 | 254 | transposase; Provisional | 84.09 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 84.0 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 83.91 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 83.64 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 83.28 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 83.24 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 82.72 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 82.7 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 82.48 | |
| PRK08727 | 233 | hypothetical protein; Validated | 82.36 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 82.31 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 82.27 | |
| PRK08939 | 306 | primosomal protein DnaI; Reviewed | 82.21 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 82.06 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 81.95 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 81.93 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 81.88 | |
| PRK10436 | 462 | hypothetical protein; Provisional | 81.76 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 81.68 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 81.55 | |
| PF10211 | 189 | Ax_dynein_light: Axonemal dynein light chain; Inte | 81.5 | |
| PF04147 | 840 | Nop14: Nop14-like family ; InterPro: IPR007276 Emg | 80.98 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 80.9 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 80.77 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 80.51 | |
| TIGR02538 | 564 | type_IV_pilB type IV-A pilus assembly ATPase PilB. | 80.46 | |
| PRK06921 | 266 | hypothetical protein; Provisional | 80.45 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 80.37 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 80.24 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 80.1 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 80.02 |
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-98 Score=869.63 Aligned_cols=666 Identities=29% Similarity=0.335 Sum_probs=491.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCeEEEEEeCCCCCCCCCCCCCceEEEcCC
Q 004553 1 MAPTPSSSSKSNQ--ILFKTPQSKHRLNFTSARNTTPNPNSTAKESAPQDHPIEVVGRIRNFPNPNPKEKPSSVLQVNPD 78 (745)
Q Consensus 1 ~~pt~~~ss~~~~--~~~~~p~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~VkV~vRIRP~~~~e~~~~~~~~v~i~~~ 78 (745)
|+|+|.++.++-. ++.++|+.++|+.+.+... ..++..++.++....||+|+|||||++..|....++.+|.+++.
T Consensus 1 ~~~~~~~~r~~~~~~~~~~~p~~~~~~~~~~~~~--s~s~~~~k~~~e~~~NIqVivRcRp~n~~E~~~~s~~VVs~~~~ 78 (1041)
T KOG0243|consen 1 MANSPSSSRSSIVQESPCRTPRETQRSNRDSSGP--SNSNTSSKDHKEKEVNIQVIVRCRPRNDRERKSKSSVVVSCDGI 78 (1041)
T ss_pred CCCCCCCCcccccccccCCCCCcCCCCccCCCCC--CCCCcccCCCCCCCCceEEEEEeCCCCchhhhcCCCeEEecCCC
Confidence 7788765544433 2789999999988866331 23445567778889999999999999999988888889988877
Q ss_pred CCEEEEecC--C--CceeEEeccccCCCcchHHHHHHHHHHhhhhhcccCcceEEEeeCCCCCCCcccccC--------C
Q 004553 79 KQTLRVRAD--F--GYRDFSLDGVSLSEEEDLDSFYKKFVESRISGVKLGEKCTIMMYGPTGSGKSHTMFG--------C 146 (745)
Q Consensus 79 ~~~v~~~~~--~--~~~~F~FD~V~f~~~~~Q~~vy~~~v~plV~~vl~G~N~tIfaYGqTGSGKTyTm~G--------~ 146 (745)
+..|.+... . ..+.|+||+| |+|.++|.+||+.+|.|+|..|+.|||||||||||||+||||||.| .
T Consensus 79 ~kEV~v~~~~~sk~~~k~ftFDkV-FGpes~Q~d~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l 157 (1041)
T KOG0243|consen 79 RKEVAVRQTIASKQIDKTFTFDKV-FGPESQQEDLYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGEL 157 (1041)
T ss_pred cceEEEecccccccccceeeccee-eCcchhHHHHHHHHHHHHHHHHhccCCceEEEecCCCCCceeeeecCcccccCCC
Confidence 776777665 2 3688999999 8999999999999999999999999999999999999999999999 5
Q ss_pred CCCCchHHHHHHHHhccccccCCccceeEEEEEEEEEEecceeeeccCCCCCCCCcccCCCCCCCceEEEEcccccCcce
Q 004553 147 AKQPGIVYKSLKDILGDESDNGEKIGFSTFVQVTVLEIYNEEIYDLLSSNNGGGFGIGWPKGSGSKVRLEVMGKKAKNAT 226 (745)
Q Consensus 147 ~~~~GIIpral~~LF~~i~~~~~~~~~~~~V~vS~~EIYnE~I~DLL~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (745)
+..+|||||++.+||..+...+ ..|+|+|||+|+|||.|+|||++..... ...+++... .+.....|..++|+.
T Consensus 158 ~~~aGIIPRal~~IFd~Le~~~----~EYsvKVSfLELYNEEl~DLLa~~~~~~-~~~~~k~~~-~~~~~kggV~vkGlE 231 (1041)
T KOG0243|consen 158 PSEAGIIPRALRQIFDTLEAQG----AEYSVKVSFLELYNEELTDLLASEDTSD-KKLRIKDDS-TIVDGKGGVIVKGLE 231 (1041)
T ss_pred CccCCcchHHHHHHHHHHHhcC----CeEEEEEEehhhhhHHHHHhcCCccccc-cccccccCC-cccCCcCcEEEecce
Confidence 6789999999999999998764 3799999999999999999999887632 111222211 111334566789999
Q ss_pred EEecccHHHHHHHHHHHHhccccccccCcCCCCCcceeEEEeee----ee-------cceeeeeecCCCccccccccchH
Q 004553 227 FISGIEAGKISKEIQKVEKRRIVKSTQCNERSSRSHCMIILDVP----TV-------GGRLMLVDMAGSENIEQAGQTGF 295 (745)
Q Consensus 227 ~v~v~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~If~i~v~----~~-------~s~L~fVDLAGSEr~~~t~~~g~ 295 (745)
++.|.++.+++++|++|...|++++|.||..|||||+||+|+|. +. .|+|+||||||||.+.++|+.+.
T Consensus 232 Ei~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t~~geelvK~GKLNLVDLAGSENI~RSGA~~~ 311 (1041)
T KOG0243|consen 232 EIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENTPEGEELVKIGKLNLVDLAGSENISRSGARNG 311 (1041)
T ss_pred eeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEecCCCcchhhHhhcccceeeccccccccccccccc
Confidence 99999999999999999999999999999999999999999983 32 38999999999999999999998
Q ss_pred HHHHHHhhhccchHHHHHHHHHHhCCCCcccCCCCccccccccccCCCCcceEEEEEeCCCCCCHHHHHHHHHHHHHhcc
Q 004553 296 EAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCASPDPKEIHKTICTLEYGAKAKC 375 (745)
Q Consensus 296 ~~k~E~~~IN~SL~aLg~vI~aL~~~~~~VPyRdSKLTrLLqdsLgG~nskt~mI~~isP~~~~~~ETlsTLrfa~rak~ 375 (745)
|++ |++.||+||++||+||.||.++..|||||+||||||||||||| +.||+|||||||+..+++||++||.||.|||+
T Consensus 312 RAr-EAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDSLGG-kTKT~iIATiSPa~~~lEETlSTLEYA~RAKn 389 (1041)
T KOG0243|consen 312 RAR-EAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDSLGG-KTKTCIIATISPAKHNLEETLSTLEYAHRAKN 389 (1041)
T ss_pred hhH-HhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhCC-CceeEEEEEeCCCcccHHHHHHHHHHHHHhhh
Confidence 777 9999999999999999999999999999999999999999986 89999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcCCchhHHHhhhHHHHHHHHHHHHHHHH-------HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004553 376 IIRGPHTPDKIGAEDSSSAVILGSKISAMDQFIYKLQMEN-------KL--REKERNEAHDKLLKKEEEVSQLRAKLQLV 446 (745)
Q Consensus 376 I~~~p~~~~~~~~~~~~~~~~l~~~i~~l~~~i~~L~~e~-------~~--~~~e~~~~~~~l~~~~ee~~~Lr~~l~~~ 446 (745)
|+|+|.+|.++... .....+..+|..|++.+...+..+ .. .+.+.+....+|++++.++..++.++..+
T Consensus 390 IkNKPevNQkl~K~--~llKd~~~EIerLK~dl~AaReKnGvyisee~y~~~e~e~~~~~~~ieele~el~~~~~~l~~~ 467 (1041)
T KOG0243|consen 390 IKNKPEVNQKLMKK--TLLKDLYEEIERLKRDLAAAREKNGVYISEERYTQEEKEKKEMAEQIEELEEELENLEKQLKDL 467 (1041)
T ss_pred ccCCCccchHHHHH--HHHHHHHHHHHHHHHHHHHhHhhCceEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999775422 112223334444444443332221 12 33456677788888888888888888777
Q ss_pred HhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHhhccc
Q 004553 447 EEKGSGASEQEINVKVTERTQILKHQLEKKLEECQRMAEEFVEIERR-RMEERILQQ-QQEVEMLRRRLEEIEFELCHSR 524 (745)
Q Consensus 447 e~~~~~~~e~e~~~k~~e~~~~l~~ele~~~ee~~~~~e~~~e~e~~-~~ee~i~~~-q~e~e~Lr~~l~~Le~eL~~s~ 524 (745)
.+.. ....+.+..+.++...++..|+....++..+.+++.++... +.++.+.+. ..-...+.++...|.+.+..++
T Consensus 468 ~e~~--~~~~~~~~~l~~~~~~~k~~L~~~~~el~~~~ee~~~~~~~l~~~e~ii~~~~~se~~l~~~a~~l~~~~~~s~ 545 (1041)
T KOG0243|consen 468 TELY--MNQLEIKELLKEEKEKLKSKLQNKNKELESLKEELQQAKATLKEEEEIISQQEKSEEKLVDRATKLRRSLEESQ 545 (1041)
T ss_pred HHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 34456677788889999999999999999988888777665 444444433 3344455555666666663332
Q ss_pred CcccccccccCcchhhhhhhcccccCCCCccccccccCCCCccccccccccCCCcccccccccccccccccC--cc----
Q 004553 525 DRDVRSSKDLDGSSFARRLMGIYADEDPGMVKSMDLDMGDVEPFVRDLKHVDRPVHQQDNNEIQGWLQKTSN--EI---- 598 (745)
Q Consensus 525 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---- 598 (745)
. .-++|..++...+..+|+.++..+++.|...++ ...++ +...+++.....+-+..+... -+
T Consensus 546 ~---------d~s~l~~kld~~~~~~d~n~~~~~~~~~~l~~~-~~~~~--~~v~~~~s~~~~~l~~~~~~~~s~~s~~~ 613 (1041)
T KOG0243|consen 546 D---------DLSSLFEKLDRKDRLDDDNQEVIDDFQSQLSEN-LSTLH--GLVASSSSQQISQLTTMLAQMESFLSAKS 613 (1041)
T ss_pred H---------HHHHHHHHhhhhhccccccHHHHHHHhhhhhHH-HHHHH--HHHhhhhhhHHHHHHHHHhhhHHHhhhhc
Confidence 2 346788888899999999999999999999776 44444 233333322222211111111 11
Q ss_pred -cccccccccCCCccccccccccccccccccccCCchhhHHHHhhhhhhhhccCCCCCCCCCcccc---ccccccCCCCC
Q 004553 599 -DEHEVFASKYGDKVCLSTVFEEEEIEDEEDDHKDSAEDEVEKVIIEEKRVCSSGLADGNIPSLNL---TTGLLASSPQK 674 (745)
Q Consensus 599 -~~~~~~~~~~~~~~~~s~~~e~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 674 (745)
.-..+....++++.+++++++..+...+. .+..++-.-.| ..+...+.+|- .-..+..+-+.
T Consensus 614 ~~~e~~~t~~~~~r~~~~~~~e~~q~~~~~-----------~k~~~~s~l~~---i~s~~~~~~~~~~~~l~~~~~~~~~ 679 (1041)
T KOG0243|consen 614 KATEIMKTKISKDRDILSEVLESLQQLQEV-----------LKKDSESCLEV---INSSITSSINELESMLETIANTADD 679 (1041)
T ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHHH-----------HhhhHHHHHHH---HhccchhhHHHHHHHHHHHHHHHHH
Confidence 11235555678999999999986655433 33333322222 11112222221 10011111122
Q ss_pred CCCchhHHhhhHHHHHhhccc--chh--hhcccCCCC
Q 004553 675 PEDTESSRRLRIQNIFTLCGN--NRE--LSQHTRTPT 707 (745)
Q Consensus 675 ~~~~~~~r~~~~~~~~~~~~~--~~~--~~~~~~~~~ 707 (745)
.-+.-++++.-+++||.||+| .|+ +++++.-..
T Consensus 680 ~~~~i~~~l~~q~~~~~l~~~qe~~~~~~~~~~~~~~ 716 (1041)
T KOG0243|consen 680 LLQNISSRLSNQQEILSLFANQELQELVLSQDSAQEL 716 (1041)
T ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHH
Confidence 223434444459999999999 566 555543333
|
|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG3647 consensus Predicted coiled-coil protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF01486 K-box: K-box region; InterPro: IPR002487 MADS genes in plants encode key developmental regulators of vegetative and reproductive development | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK08939 primosomal protein DnaI; Reviewed | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10436 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF10211 Ax_dynein_light: Axonemal dynein light chain; InterPro: IPR019347 Axonemal dynein light chain proteins play a dynamic role in flagellar and cilial motility | Back alignment and domain information |
|---|
| >PF04147 Nop14: Nop14-like family ; InterPro: IPR007276 Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production [] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB | Back alignment and domain information |
|---|
| >PRK06921 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 745 | ||||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 9e-36 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 1e-35 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 2e-35 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 2e-35 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 2e-35 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 2e-35 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 2e-35 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 5e-33 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 9e-33 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-32 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 4e-30 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 4e-29 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 3e-28 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 8e-28 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 2e-27 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-26 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 8e-26 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 8e-26 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 1e-25 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 1e-25 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-25 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 5e-25 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 5e-25 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 5e-25 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 2e-24 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 2e-24 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-24 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 3e-24 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-24 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 9e-24 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 1e-23 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 2e-23 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 6e-23 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 6e-23 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 1e-22 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 3e-22 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 3e-22 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 4e-22 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 4e-22 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 5e-22 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 7e-22 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-21 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 2e-21 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 2e-21 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-21 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-21 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-21 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-21 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-20 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 3e-20 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-20 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-20 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 5e-20 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 7e-20 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-19 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-09 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-07 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 1e-06 |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
|
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 1e-65
Identities = 87/349 (24%), Positives = 166/349 (47%), Gaps = 43/349 (12%)
Query: 51 IEVVGRIRNFPNPNPKEKPS---SVLQVNPDKQTLRVRADFGYRDFSLDGV--SLSEEED 105
I V R+R P KE + + ++ + + D + D V + ++D
Sbjct: 7 IRVYCRLR--P-LCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDD 63
Query: 106 LDSFYKKFVESRISGVKLGEKCTIMMYGPTGSGKSHTMFGCAKQPGIVYKSLKDILGDES 165
+ K V+S + G I YG TGSGK+ T++G PG+ +++ ++
Sbjct: 64 VFEDTKYLVQSAVDGYN----VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMK 119
Query: 166 DNGEKIGFSTFVQVTVLEIYNEEIYDLLSSNNGGGFGIGWPKGSGSKVRLEVMGKKAKNA 225
+ K FS ++ ++E+Y + + DLL +++L++ K +K
Sbjct: 120 KDSNKFSFS--LKAYMVELYQDTLVDLLLPKQA------------KRLKLDIK-KDSKGM 164
Query: 226 TFISGIEAGKIS--KEIQKV----EKRRIVKSTQCNERSSRSHCMIILDV--------PT 271
+ + IS +E++ + ++R T NE+SSRSH ++ + +
Sbjct: 165 VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAI 224
Query: 272 VGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSK 331
G+L VD+AGSE ++++G G + K + IN+ AL V+ ++++G+ H+P+R+ K
Sbjct: 225 ARGKLSFVDLAGSERVKKSGSAGNQLK-EAQSINKSLSALGDVISALSSGNQHIPYRNHK 283
Query: 332 LTMLLQDSFEDDKSKILMVLCASPDPKEIHKTICTLEYGAKAKCIIRGP 380
LTML+ DS + +K LM + SP + +T +L Y ++ + I+ P
Sbjct: 284 LTMLMSDSLGGN-AKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDP 331
|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 745 | ||||
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 1e-44 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 2e-43 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 3e-43 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 7e-43 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 5e-40 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 1e-39 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-37 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 6e-37 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 3e-33 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.003 | |
| d1f5na1 | 300 | a.114.1.1 (A:284-583) Interferon-induced guanylate | 0.004 |
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Score = 161 bits (409), Expect = 1e-44
Identities = 92/375 (24%), Positives = 144/375 (38%), Gaps = 44/375 (11%)
Query: 22 KHRLNFTSARNTTPNPNSTAKESAPQDHPIEVVGRIRNFPNPNPKEK-----------PS 70
+ R+ + T +P ++H I V R R N +E
Sbjct: 11 EFRVTMECSPLTVTDP--------IEEHRICVCVRKRPL---NKQELAKKEIDVISVPSK 59
Query: 71 SVLQVNPDKQTLRVRADFGYRDFSLDGVSLSEEEDLDSFYKKFVESRISGVKLGEKCTIM 130
+L V+ K + + + F D E + Y+ + + G K T
Sbjct: 60 CLLLVHEPKLKVDLTKYLENQAFCFDFA-FDETASNEVVYRFTARPLVQTIFEGGKATCF 118
Query: 131 MYGPTGSGKSHTMFGCA------KQPGIVYKSLKDILGDESDNGEKIGFSTFVQVTVLEI 184
YG TGSGK+HTM G GI + +D+ + + V VT EI
Sbjct: 119 AYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVF-LLKNQPRYRNLNLEVYVTFFEI 177
Query: 185 YNEEIYDLLSSNNGGGFGIGWPKGSGSKVRLEVMGKKAKNATFISGIEAGKISKEIQKVE 244
YN +++DL K + + A + K I
Sbjct: 178 YNGKVFDL-----------LNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGS 226
Query: 245 KRRIVKSTQCNERSSRSHCMIILDVPTVG---GRLMLVDMAGSENIEQAGQTGFEAKMQT 301
R T N SSRSH + + T G G+ LVD+AG+E + +M+
Sbjct: 227 ACRTSGQTFANSNSSRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEG 286
Query: 302 AKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCASPDPKEIH 361
A+IN+ +ALK + ++ +H PFR+SKLT +L+DSF + S+ M+ SP
Sbjct: 287 AEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCE 346
Query: 362 KTICTLEYGAKAKCI 376
T+ TL Y + K +
Sbjct: 347 YTLNTLRYADRVKEL 361
|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 745 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 91.61 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 83.08 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 82.87 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=601.75 Aligned_cols=320 Identities=25% Similarity=0.417 Sum_probs=282.6
Q ss_pred CEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 94899984899999999999845999499979999438885127835304999602899999988766531026753589
Q 004553 50 PIEVVGRIRNFPNPNPKEKPSSVLQVNPDKQTLRVRADFGYRDFSLDGVSLSEEEDLDSFYKKFVESRISGVKLGEKCTI 129 (745)
Q Consensus 50 ~vkV~vRIRP~~~~e~~~~~~~~i~i~~~~~ti~~~~~~~~~~F~FD~V~f~~~~sQ~~vy~~~v~plV~~vl~G~N~tI 129 (745)
.|+|+|||||+...|...+...++.+..+............+.|.||+| |+++++|++||+. +.|+|+.+++|||+||
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~v-f~~~~~q~~vy~~-v~~lv~~~l~G~n~~i 78 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRV-FDGNATQDDVFED-TKYLVQSAVDGYNVCI 78 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEE-ECTTCCHHHHHHT-TTHHHHHHHTTCEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEE-CCCCCCHHHHHHH-HHHHHHHHHCCCCEEE
T ss_conf 9699999278993662258987599679975873578998547778856-4999998999998-9999999966985035
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCCC--CCCCC
Q ss_conf 8407899887631357889984079899997521123687666038999999997356121056889999975--55799
Q 004553 130 MMYGPTGSGKSHTMFGCAKQPGIVYKSLKDILGDESDNGEKIGFSTFVQVTVLEIYNEEIYDLLSSNNGGGFG--IGWPK 207 (745)
Q Consensus 130 faYGqTGSGKTyTm~G~~~~~GIipral~~LF~~~~~~~~~~~~~~~V~vS~~EIYnE~I~DLL~~~~~~~l~--i~~~~ 207 (745)
||||||||||||||+|+..++||+||++.+||..+..... ...|.|.+||+|||||+|||||.+....... ++...
T Consensus 79 ~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~--~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~ 156 (364)
T d1sdma_ 79 FAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSN--KFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDS 156 (364)
T ss_dssp EEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGG--TEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECC
T ss_conf 5223478776201656766551367899998865531034--65536999988872363223357654555443313314
Q ss_pred CCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE--------ECCEEEEE
Q ss_conf 9998159998131257634984343788999999998614333456758888841027875631--------05601233
Q 004553 208 GSGSKVRLEVMGKKAKNATFISGIEAGKISKEIQKVEKRRIVKSTQCNERSSRSHCMIILDVPT--------VGGRLMLV 279 (745)
Q Consensus 208 ~~~~~~~~~~~~~~~~~l~~v~v~s~~ev~~~l~~g~~~R~~~~T~~N~~SSRSH~If~I~v~~--------~~s~L~lV 279 (745)
..+..+.+++.+.+.+.+++..++..|.++|.+++|.+|..|||||+||+|.+.+ ..++|+||
T Consensus 157 ---------~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~v 227 (364)
T d1sdma_ 157 ---------KGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFV 227 (364)
T ss_dssp ---------TSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEE
T ss_pred ---------CCCCCCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEE
T ss_conf ---------67602035300011778897898640660004453435410333635999999970367650356799840
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 15788630001344388989885200104889999999718998446899820000123358988622899982899878
Q 004553 280 DMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMVLCASPDPKE 359 (745)
Q Consensus 280 DLAGSEr~~~t~~~g~~~k~E~~~IN~SL~aLg~vI~aL~~~~~~VPyRdSKLTrLLqdsLgG~nskt~mI~~iSP~~~~ 359 (745)
|||||||..++++.|.+++ |+.+||+||++|++||.+|+.+..|||||+||||+||+|+||| ||+|+||+||||+..+
T Consensus 228 DLAGsEr~~~~~~~g~~~~-E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lgg-ns~t~~I~~isp~~~~ 305 (364)
T d1sdma_ 228 DLAGSERVKKSGSAGNQLK-EAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGG-NAKTLMFVNISPAESN 305 (364)
T ss_dssp ECCCCSCCCC----------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTS-SSEEEEEEEECCBGGG
T ss_pred CHHHCCCCCCCCCCCCEEE-ECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC-CCEEEEEEEECCCCCH
T ss_conf 4100352001466675023-3233564320689999999749975773011213887863499-9509999996987001
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 7877999899988122215888788
Q 004553 360 IHKTICTLEYGAKAKCIIRGPHTPD 384 (745)
Q Consensus 360 ~~ETlsTLrfa~rak~I~~~p~~~~ 384 (745)
++||++||+||++|++|+|.|.+|.
T Consensus 306 ~~eTl~TL~fa~~ak~i~n~p~~n~ 330 (364)
T d1sdma_ 306 LDETHNSLTYASRVRSIVNDPSKNV 330 (364)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCCE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 8999999999999842066783557
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|