Citrus Sinensis ID: 004558


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHccccccEEEEEEcccccHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHccccccccccEEEEEcccccHHHHHHHcccccEEEEcHHHHHHHHHHHHccccHHHHHHHHHcccccEEEEEEccccccccHHHHHHHccccEEEEEEEEEcccEEEEccccccccccccEEEEEEEccccccccccccHHccccccccccccccccEEEEEEccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHcccccccccccEEEEEEEcccccHHcccccccccccccccccHHHHHHHHccccccc
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEccccHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHccHHHccEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHccccEEEEEcHHHHHHHHHHHHHcccHHHHHHHHHcccccEEEEEcccccccccHHHHHHHccccEEEEEEEEccccEEccccccccEcccccEEEEEEcccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHcccccccccEEEEEEEEcccccHHHHHccccccccccccccccEEEEEEEEccccc
mqnsnndeasvtkttekpplpkrsktisddthfpgplfpavrrtdkpfdlrvsidsdaaasssslsssslsssngfnerdwmypsflgphmgrrrikvkpsklefkgnEEKKRIQELGSKKEEKAVASLAVTQsnsvtqtssvtqlsgrtrgLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCsyksiagnngidvlhtdnnsdsnfgnadgRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRtkknkeevplkkrVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVadsgnhadrvgtgprIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMgtsvicrsgsplilaDLKKVSVSKARAIIVLasdenadqsDARALRVVLSLTGVKEGLRGHVVVEmsdldneplvkLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENaefyikrwpqlddlrfeevvisfpdaipcGIKVAaeggkiilnpddnyvlkegdevlviaedddtyapgplpevvckrsflkipdppkypekilfcgwrrDIDDMIMVLEAFLapgselwmlnevpekerekkltdggldisglMNIKLVHREGNAVIRRHLeslpletfdsmshwkTRLCILThvllppfs
mqnsnndeasvtkttekpplpkrsktisddthfpgplfpavrrtdKPFDLRVSIDSdaaasssslsssslsssngfneRDWMYPsflgphmgrrrikvkpsklefkgneekkriqelgskkeEKAVASLavtqsnsvtqtssvtqlsgrtrgLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNfskrtkknkeevplkkrvaysVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVanksigggvIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVlasdenadqsdARALRVVLSltgvkeglrGHVVvemsdldneplVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRsflkipdppkypEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIdsdaaasssslsssslsssNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAvtqsnsvtqtssvtqLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKllallfatifliifgglALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
********************************************************************************WMYPSFL******************************************************************KSSLMTYYMLIINCILCVCYAIHLRDRVEKLEE**SSLRRFCSYKSIAGNNGIDVLHTDN****NFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFS*********VPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASD******DARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEV********LTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLL****
***********************************PLF****************************************RDWMY*************************************************************************LMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSI*****************NFGNADGRTVALYSVIVTLLMPFVLYKYLDYLP*****************LKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVD*******EVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAP************************ILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREK******LDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPF*
************************KTISDDTHFPGPLFPAVRRTDKPFDLRVSIDS*******************FNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKE**************************RTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
***************EKPPLPKRSKTISDDTHFPGPLFPAV**TD*P*****************************NERDWMYP****P*****************************************************************SSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPG*********S******PPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
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MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYxxxxxxxxxxxxxxxxxxxxxCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIxxxxxxxxxxxxxxxxxxxxxFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSMSHWKTRLCILTHVLLPPFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query745 2.2.26 [Sep-21-2011]
Q6RHR6 882 Ion channel DMI1 OS=Medic N/A no 0.918 0.775 0.670 0.0
Q4VY51 894 Probable ion channel SYM8 N/A no 0.930 0.775 0.670 0.0
Q5H8A5 917 Ion channel POLLUX OS=Lot N/A no 0.938 0.762 0.670 0.0
Q5N941 965 Probable ion channel POLL yes no 0.863 0.666 0.678 0.0
Q9LTX4 824 Probable ion channel POLL yes no 0.754 0.682 0.746 0.0
Q5H8A6 853 Ion channel CASTOR OS=Lot N/A no 0.829 0.724 0.631 0.0
Q75LD5 893 Probable ion channel CAST no no 0.769 0.641 0.645 0.0
Q8VZM7 813 Putative ion channel POLL no no 0.555 0.509 0.241 1e-34
Q940Y9 817 Putative ion channel POLL no no 0.555 0.506 0.241 5e-33
O27564336 Calcium-gated potassium c yes no 0.405 0.898 0.220 7e-07
>sp|Q6RHR6|DMI1_MEDTR Ion channel DMI1 OS=Medicago truncatula GN=DMI1 PE=2 SV=1 Back     alignment and function desciption
 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/726 (67%), Positives = 561/726 (77%), Gaps = 42/726 (5%)

Query: 5   NNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSS 64
           +N+E+S      KPPL K++KT+                     +LRVS+       ++ 
Sbjct: 4   SNEESSNLNVMNKPPL-KKTKTLPS------------------LNLRVSVTPPNPNDNNG 44

Query: 65  LSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEK 124
           +  +S + ++ F+E+ W YPSFLG       I     K         K    L       
Sbjct: 45  IGGTSTTKTD-FSEQQWNYPSFLG-------IGSTSRKRRQPPPPPSKPPVNLIPPHPR- 95

Query: 125 AVASLAVTQSNSVTQTSSVTQ----LSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDR 180
               L+V   N  T +         ++ + +   +S   +Y+L+I CI+ V Y+ +L+ +
Sbjct: 96  ---PLSVNDHNKTTSSLLPQPSSSSITKQQQQHSTSSPIFYLLVICCIILVPYSAYLQYK 152

Query: 181 VEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPF 240
           + KL++    L   C        NG   +  + + D N   AD RT+ALY V+ TL++PF
Sbjct: 153 LAKLKDMKLQL---CGQIDFCSRNGKTSIQEEVDDDDN---ADSRTIALYIVLFTLILPF 206

Query: 241 VLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLII 300
           VLYKYLDYLPQI NF +RT+ NKE+VPLKKRVAY VDV FS+YPYAKLLALL AT+FLI 
Sbjct: 207 VLYKYLDYLPQIINFLRRTESNKEDVPLKKRVAYMVDVFFSIYPYAKLLALLCATLFLIA 266

Query: 301 FGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGL 360
           FGGLALYAV+  S AEALW SWT+VAD+GNHA+  GTG RIVSVSIS+GGMLIFAMMLGL
Sbjct: 267 FGGLALYAVTGGSMAEALWHSWTYVADAGNHAETEGTGQRIVSVSISAGGMLIFAMMLGL 326

Query: 361 VSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERD 420
           VSDAISEKVDSLRKGKSEVIE+NH+LILGWSDKLGSLLKQLA+ANKS+GGGVIVVLAE++
Sbjct: 327 VSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLGSLLKQLAIANKSVGGGVIVVLAEKE 386

Query: 421 KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARA 480
           KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLA+DENADQSDARA
Sbjct: 387 KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLAADENADQSDARA 446

Query: 481 LRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG 540
           LRVVLSL GVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG
Sbjct: 447 LRVVLSLAGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG 506

Query: 541 LAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDN 600
           LAQIWEDILGFENAEFYIKRWP+LDDL F++++ISFPDAIPCG+KVAA+GGKI++NPDDN
Sbjct: 507 LAQIWEDILGFENAEFYIKRWPELDDLLFKDILISFPDAIPCGVKVAADGGKIVINPDDN 566

Query: 601 YVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIM 660
           YVL++GDEVLVIAEDDDTYAPGPLPEV  K  F +I DPPKYPEKILFCGWRRDIDDMIM
Sbjct: 567 YVLRDGDEVLVIAEDDDTYAPGPLPEVR-KGYFPRIRDPPKYPEKILFCGWRRDIDDMIM 625

Query: 661 VLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPL 720
           VLEAFLAPGSELWM NEVPEKERE+KL  G LD+ GL NIKLVHREGNAVIRRHLESLPL
Sbjct: 626 VLEAFLAPGSELWMFNEVPEKERERKLAAGELDVFGLENIKLVHREGNAVIRRHLESLPL 685

Query: 721 ETFDSM 726
           ETFDS+
Sbjct: 686 ETFDSI 691




Required for early signal transduction events leading to endosymbiosis. Acts early in a signal transduction chain leading from the perception of Nod factor to the activation of calcium spiking. Also involved in mycorrhizal symbiosis. May be involved in the regulation of the calcium channel responsible for calcium spiking by mobilizing another cation, and thereby altering the membrane potential.
Medicago truncatula (taxid: 3880)
>sp|Q4VY51|SYM8_PEA Probable ion channel SYM8 OS=Pisum sativum GN=SYM8 PE=1 SV=3 Back     alignment and function description
>sp|Q5H8A5|POLLU_LOTJA Ion channel POLLUX OS=Lotus japonicus GN=POLLUX PE=1 SV=1 Back     alignment and function description
>sp|Q5N941|POLLU_ORYSJ Probable ion channel POLLUX OS=Oryza sativa subsp. japonica GN=Os01g0870100 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTX4|POLLU_ARATH Probable ion channel POLLUX OS=Arabidopsis thaliana GN=At5g49960 PE=2 SV=1 Back     alignment and function description
>sp|Q5H8A6|CASTO_LOTJA Ion channel CASTOR OS=Lotus japonicus GN=CASTOR PE=1 SV=1 Back     alignment and function description
>sp|Q75LD5|CASTO_ORYSJ Probable ion channel CASTOR OS=Oryza sativa subsp. japonica GN=Os03g0843600 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZM7|POLL1_ARATH Putative ion channel POLLUX-like 1 OS=Arabidopsis thaliana GN=At5g02940 PE=2 SV=1 Back     alignment and function description
>sp|Q940Y9|POLL2_ARATH Putative ion channel POLLUX-like 2 OS=Arabidopsis thaliana GN=At5g43745 PE=2 SV=1 Back     alignment and function description
>sp|O27564|MTHK_METTH Calcium-gated potassium channel MthK OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=mthK PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
255571020 889 conserved hypothetical protein [Ricinus 0.867 0.726 0.796 0.0
449503321 942 PREDICTED: ion channel DMI1-like [Cucumi 0.939 0.743 0.702 0.0
449435486 915 PREDICTED: ion channel DMI1-like [Cucumi 0.938 0.763 0.701 0.0
225448136818 PREDICTED: ion channel DMI1 [Vitis vinif 0.8 0.728 0.809 0.0
224129674711 predicted protein [Populus trichocarpa] 0.697 0.731 0.892 0.0
224119998693 predicted protein [Populus trichocarpa] 0.677 0.728 0.916 0.0
357445307 882 DMI1 protein [Medicago truncatula] gi|62 0.918 0.775 0.670 0.0
147789454 1817 hypothetical protein VITISV_012096 [Viti 0.851 0.348 0.702 0.0
161105393 894 SYM8 [Pisum sativum] 0.930 0.775 0.673 0.0
133740540 894 DMI1 protein homologue [Pisum sativum] 0.930 0.775 0.673 0.0
>gi|255571020|ref|XP_002526461.1| conserved hypothetical protein [Ricinus communis] gi|223534241|gb|EEF35956.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1046 bits (2704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/658 (79%), Positives = 571/658 (86%), Gaps = 12/658 (1%)

Query: 77  NERDWMYPSFLGPHM---GRRRIKVKPSK----LEFKGNEEKKRIQELGSKKEEKAVASL 129
           + RDW+YPSFLGPH+   G  R+ VK  +     E KG   +  ++E   +K+EK  + +
Sbjct: 45  DSRDWVYPSFLGPHVVAAGANRVTVKGRRGKVVEERKGTVSRDSVKE---EKKEKVASQV 101

Query: 130 AVTQSNSVTQTSSVTQLSGRT-RGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEEN 188
            VTQS S+TQ+++   +  RT RGL      +Y LI  CIL V  +IHLR +V KLEEEN
Sbjct: 102 LVTQSGSLTQSTATGVIRSRTSRGLFKHSFVFYFLIFTCILSVSCSIHLRIKVRKLEEEN 161

Query: 189 SSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDY 248
            +LR  CS +S  GNN I+VL  +++S  NF N D R VALYSVI TL+MPF+ YKYLDY
Sbjct: 162 INLRTACSNQSGVGNNSIEVLQLEDDSSFNFQNGDSRAVALYSVIFTLIMPFLFYKYLDY 221

Query: 249 LPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYA 308
           LP+IK  SKRT+ NKEEVPLKKR+AY VDV FSVYPYAKLLALLFATIFLI FGGLALYA
Sbjct: 222 LPEIKTLSKRTRNNKEEVPLKKRIAYMVDVFFSVYPYAKLLALLFATIFLIGFGGLALYA 281

Query: 309 VSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK 368
           VSD SFAEALWLSWTFVADSGNHADR+GTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK
Sbjct: 282 VSDGSFAEALWLSWTFVADSGNHADRIGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK 341

Query: 369 VDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDI 428
           VDSLRKGKSEVIEK HILILGWSDKLGSLLKQLA+ANKSIGGGV+VVLAERDKEEMEMDI
Sbjct: 342 VDSLRKGKSEVIEKKHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMEMDI 401

Query: 429 AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLT 488
           AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDA ALRVVLSLT
Sbjct: 402 AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDAHALRVVLSLT 461

Query: 489 GVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI 548
           GVKEGL+GHVVVEMSD+DNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI
Sbjct: 462 GVKEGLKGHVVVEMSDVDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI 521

Query: 549 LGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDE 608
           LGFENAEFYIKRWPQLD LRFE+V+ISFPDAIPCG+K+AAEGGKI LNPDD+YVLKEGDE
Sbjct: 522 LGFENAEFYIKRWPQLDGLRFEDVLISFPDAIPCGVKLAAEGGKINLNPDDSYVLKEGDE 581

Query: 609 VLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAP 668
           +LVIAEDDDTYAPGPLP+V  + S  K+ DPPKYPEKILFCGWRRDIDDMIMVLE  LAP
Sbjct: 582 ILVIAEDDDTYAPGPLPKVR-RGSCPKLIDPPKYPEKILFCGWRRDIDDMIMVLEECLAP 640

Query: 669 GSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSM 726
           GSELWM NEVPEKEREKKLTDGGLD SGL NIKLVHREGNAVIRRHL+SLPLETFDS+
Sbjct: 641 GSELWMFNEVPEKEREKKLTDGGLDTSGLENIKLVHREGNAVIRRHLDSLPLETFDSI 698




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503321|ref|XP_004161944.1| PREDICTED: ion channel DMI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449435486|ref|XP_004135526.1| PREDICTED: ion channel DMI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225448136|ref|XP_002263318.1| PREDICTED: ion channel DMI1 [Vitis vinifera] gi|297739532|emb|CBI29714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224129674|ref|XP_002328774.1| predicted protein [Populus trichocarpa] gi|222839072|gb|EEE77423.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224119998|ref|XP_002331112.1| predicted protein [Populus trichocarpa] gi|222872840|gb|EEF09971.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357445307|ref|XP_003592931.1| DMI1 protein [Medicago truncatula] gi|62286545|sp|Q6RHR6.1|DMI1_MEDTR RecName: Full=Ion channel DMI1; AltName: Full=Does not make infections protein 1 gi|44953222|gb|AAS49490.1| DMI1 protein [Medicago truncatula] gi|92870250|gb|ABE79577.1| Ion channel DMI-1 , putative [Medicago truncatula] gi|355481979|gb|AES63182.1| DMI1 protein [Medicago truncatula] gi|357394659|gb|AET75788.1| DMI1 [Cloning vector pHUGE-MtNFS] gi|357394672|gb|AET75800.1| DMI1 [Cloning vector pHUGE-LjMtNFS] Back     alignment and taxonomy information
>gi|147789454|emb|CAN73312.1| hypothetical protein VITISV_012096 [Vitis vinifera] Back     alignment and taxonomy information
>gi|161105393|gb|ABX57723.1| SYM8 [Pisum sativum] Back     alignment and taxonomy information
>gi|133740540|emb|CAJ00334.2| DMI1 protein homologue [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
UNIPROTKB|Q4VY51 894 SYM8 "Probable ion channel SYM 0.908 0.757 0.657 1.3e-233
TAIR|locus:2158799 824 AT5G49960 [Arabidopsis thalian 0.739 0.668 0.736 1.4e-215
TAIR|locus:2151276 813 AT5G02940 [Arabidopsis thalian 0.4 0.366 0.230 4.5e-28
TAIR|locus:505006671 817 AT5G43745 [Arabidopsis thalian 0.4 0.364 0.253 1e-27
UNIPROTKB|O27564336 mthK "Calcium-gated potassium 0.216 0.479 0.237 9e-10
UNIPROTKB|Q4VY51 SYM8 "Probable ion channel SYM8" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
 Score = 2223 (787.6 bits), Expect = 1.3e-233, Sum P(2) = 1.3e-233
 Identities = 459/698 (65%), Positives = 524/698 (75%)

Query:    39 PAVRRT----DKP-FDLRVSIXXXXXXXXXXXXXXXXXXXNGFNERDWMYPSFLG-PHMG 92
             P ++RT     +P  +LRVSI                     F ++   YPSFLG     
Sbjct:    17 PPLKRTKTLAQQPSLNLRVSIAAADNGIGNSSSSSTKTD---FEQQQRNYPSFLGIGSTS 73

Query:    93 RRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAXXXXXXXXXXXXXXXLSGRTRG 152
             R+R    P K        K    +  +K   +   S +                  +   
Sbjct:    74 RKRRPPPPPKPSNITPNVKPPASDFQTKPHSEPKTSPSSSSPPSLPIAITKQ--QQQQHS 131

Query:   153 LKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTD 212
             + S +  +Y+ +I C++ V Y+  L+ ++ KL++    L   C        NG   L  D
Sbjct:   132 ISSPI--FYLFVITCVIFVPYSAFLQYKLAKLKDMKLQL---CCQIDFCSGNGKTSLQKD 186

Query:   213 NNSDSNFG----NADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPL 268
                D +F     NAD RT++LY V+ TL++PF+LYKY+DYLPQ+ NFS+RT  NKE+VPL
Sbjct:   187 VVDDGSFSYYILNADSRTISLYIVLFTLVLPFILYKYIDYLPQMINFSRRTNSNKEDVPL 246

Query:   269 KKRVAYSVDVCFSVYPYAKXXXXXXXXXXXXXXXXXALYAVSDSSFAEALWLSWTFVADS 328
             KKRVAY VDV FS+YPYAK                 ALYAV+  S AEALW SWT+VAD+
Sbjct:   247 KKRVAYMVDVFFSIYPYAKLLALLFATLFLIAFGGLALYAVTGGSMAEALWHSWTYVADA 306

Query:   329 GNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILIL 388
             GNHA+  G G RIVSVSIS+GGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIE+NH+LIL
Sbjct:   307 GNHAETEGMGQRIVSVSISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLIL 366

Query:   389 GWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPL 448
             GWSDKLGSLLKQLA+ANKS+GGGVIVVLAE++KEEMEMDIAKLEFDFMGTSVICRSGSPL
Sbjct:   367 GWSDKLGSLLKQLAIANKSVGGGVIVVLAEKEKEEMEMDIAKLEFDFMGTSVICRSGSPL 426

Query:   449 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNE 508
             ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKE LRGHVVVEMSDLDNE
Sbjct:   427 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEALRGHVVVEMSDLDNE 486

Query:   509 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLR 568
             PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWP+LD L 
Sbjct:   487 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPELDGLL 546

Query:   569 FEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVV 628
             F++++ISFPDAIPCG+KV+A+GGKI++NPDDNYVL++GDEVLVIAEDDDTYAPGPLPEV 
Sbjct:   547 FKDILISFPDAIPCGVKVSADGGKIVINPDDNYVLRDGDEVLVIAEDDDTYAPGPLPEVR 606

Query:   629 CKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLT 688
              K  F +I DPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWM NEVPEK+RE+KL 
Sbjct:   607 -KGYFPRIRDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKQRERKLA 665

Query:   689 DGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSM 726
              G LD+ GL NIKLVHREGNAVIRRHLESLPLETFDS+
Sbjct:   666 AGELDVFGLENIKLVHREGNAVIRRHLESLPLETFDSI 703


GO:0034220 "ion transmembrane transport" evidence=NAS
GO:0042802 "identical protein binding" evidence=NAS
GO:0044005 "induction by symbiont in host of tumor, nodule, or growth" evidence=IMP
TAIR|locus:2158799 AT5G49960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151276 AT5G02940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006671 AT5G43745 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O27564 mthK "Calcium-gated potassium channel MthK" [Methanothermobacter thermautotrophicus str. Delta H (taxid:187420)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LTX4POLLU_ARATHNo assigned EC number0.74690.75430.6820yesno
Q5N941POLLU_ORYSJNo assigned EC number0.67820.86300.6663yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
pfam06241208 pfam06241, DUF1012, Protein of unknown function (D 6e-13
COG0569225 COG0569, TrkA, K+ transport systems, NAD-binding c 0.003
>gnl|CDD|114933 pfam06241, DUF1012, Protein of unknown function (DUF1012) Back     alignment and domain information
 Score = 68.2 bits (166), Expect = 6e-13
 Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 461 ARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIE 520
           ARAII+L +  +  + D  A   VL+L  +++      +VE+S  +   L+K + G  +E
Sbjct: 1   ARAIIILPTKGDRYEVDTDAFLSVLALEPIQKMESIPTIVEVSSPNMYDLLKSISGLKVE 60

Query: 521 TVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAI 580
            V   +   +L +QC+ Q  L +I+  +L +    F +  +P L  +++ ++ + F + +
Sbjct: 61  PV--ENSTSKLFVQCSRQKDLIKIYRHLLNYSKNVFNLCSFPNLTGMKYRQLRLGFQEVV 118

Query: 581 PCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIA 613
            CGI      GK+  +P+D+  L E D++L IA
Sbjct: 119 VCGI---LRDGKVNFHPNDDEELMETDKLLFIA 148


Family of uncharacterized proteins found in both eukaryotes and bacteria. Length = 208

>gnl|CDD|223643 COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 745
PRK10537393 voltage-gated potassium channel; Provisional 99.97
PRK09496 453 trkA potassium transporter peripheral membrane com 99.97
PF06241206 DUF1012: Protein of unknown function (DUF1012); In 99.94
KOG1420 1103 consensus Ca2+-activated K+ channel Slowpoke, alph 99.92
COG0569225 TrkA K+ transport systems, NAD-binding component [ 99.9
PRK09496453 trkA potassium transporter peripheral membrane com 99.86
KOG3193 1087 consensus K+ channel subunit [Inorganic ion transp 99.82
PRK10669558 putative cation:proton antiport protein; Provision 99.74
PRK03659601 glutathione-regulated potassium-efflux system prot 99.68
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 99.65
PRK03562621 glutathione-regulated potassium-efflux system prot 99.64
PF0788579 Ion_trans_2: Ion channel; InterPro: IPR013099 This 99.13
KOG3713477 consensus Voltage-gated K+ channel KCNB/KCNC [Inor 98.93
COG1226212 Kch Kef-type K+ transport systems, predicted NAD-b 98.85
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 98.82
COG0569 225 TrkA K+ transport systems, NAD-binding component [ 98.7
KOG1419654 consensus Voltage-gated K+ channel KCNQ [Inorganic 98.66
KOG1545507 consensus Voltage-gated shaker-like K+ channel KCN 98.61
PLN03192 823 Voltage-dependent potassium channel; Provisional 98.47
PRK03562 621 glutathione-regulated potassium-efflux system prot 98.45
PRK03659 601 glutathione-regulated potassium-efflux system prot 98.35
PRK10537393 voltage-gated potassium channel; Provisional 98.34
KOG4404350 consensus Tandem pore domain K+ channel TASK3/THIK 98.32
PRK10669558 putative cation:proton antiport protein; Provision 98.24
COG0490162 Putative regulatory, ligand-binding protein relate 98.23
PF0208071 TrkA_C: TrkA-C domain; InterPro: IPR006037 The reg 97.96
COG3400 471 Uncharacterized protein conserved in bacteria [Fun 97.94
KOG4390632 consensus Voltage-gated A-type K+ channel KCND [In 97.85
PF01007336 IRK: Inward rectifier potassium channel; InterPro: 97.78
KOG3684489 consensus Ca2+-activated K+ channel proteins (inte 97.68
PRK06719157 precorrin-2 dehydrogenase; Validated 97.53
KOG1418433 consensus Tandem pore domain K+ channel [Inorganic 97.45
KOG0498727 consensus K+-channel ERG and related proteins, con 97.39
KOG4404350 consensus Tandem pore domain K+ channel TASK3/THIK 97.26
KOG1418433 consensus Tandem pore domain K+ channel [Inorganic 97.24
PF03493101 BK_channel_a: Calcium-activated BK potassium chann 97.09
KOG0501 971 consensus K+-channel KCNQ [Inorganic ion transport 97.09
PRK06719157 precorrin-2 dehydrogenase; Validated 97.0
COG3273204 Uncharacterized conserved protein [Function unknow 96.84
PRK06718 202 precorrin-2 dehydrogenase; Reviewed 96.61
KOG0499815 consensus Cyclic nucleotide-gated cation channel C 96.33
KOG14201103 consensus Ca2+-activated K+ channel Slowpoke, alph 96.01
TIGR01470 205 cysG_Nterm siroheme synthase, N-terminal domain. T 95.98
KOG0500536 consensus Cyclic nucleotide-gated cation channel C 95.78
COG1226 212 Kch Kef-type K+ transport systems, predicted NAD-b 95.74
PRK06718202 precorrin-2 dehydrogenase; Reviewed 95.64
KOG31931087 consensus K+ channel subunit [Inorganic ion transp 94.72
PRK05326562 potassium/proton antiporter; Reviewed 94.62
TIGR03802 562 Asp_Ala_antiprt aspartate-alanine antiporter. All 94.39
PF13460183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 94.05
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 93.97
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 93.83
PF03435386 Saccharop_dh: Saccharopine dehydrogenase ; InterPr 93.79
KOG3827400 consensus Inward rectifier K+ channel [Inorganic i 93.69
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 93.57
PF00520200 Ion_trans: Ion transport protein calcium channel s 93.49
PRK04972558 putative transporter; Provisional 93.35
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 93.16
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.9
PF13460183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 92.77
PRK03818552 putative transporter; Validated 92.65
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 92.62
PRK05562 223 precorrin-2 dehydrogenase; Provisional 92.53
PF05368 233 NmrA: NmrA-like family; InterPro: IPR008030 NmrA i 92.48
PLN02819 1042 lysine-ketoglutarate reductase/saccharopine dehydr 92.19
CHL00194317 ycf39 Ycf39; Provisional 91.82
PRK03818 552 putative transporter; Validated 91.8
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 91.64
PF03435 386 Saccharop_dh: Saccharopine dehydrogenase ; InterPr 91.4
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 91.27
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 90.9
COG0168499 TrkG Trk-type K+ transport systems, membrane compo 90.9
COG0373 414 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] 90.75
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 90.65
PRK12475 338 thiamine/molybdopterin biosynthesis MoeB-like prot 90.58
PRK05562223 precorrin-2 dehydrogenase; Provisional 90.41
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 90.39
PLN02819 1042 lysine-ketoglutarate reductase/saccharopine dehydr 89.87
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 89.79
PRK01581 374 speE spermidine synthase; Validated 89.76
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 89.71
PRK00536262 speE spermidine synthase; Provisional 89.52
PRK04972 558 putative transporter; Provisional 88.81
PF05368233 NmrA: NmrA-like family; InterPro: IPR008030 NmrA i 88.78
CHL00194 317 ycf39 Ycf39; Provisional 88.65
COG1648 210 CysG Siroheme synthase (precorrin-2 oxidase/ferroc 88.6
PRK06914280 short chain dehydrogenase; Provisional 88.58
PRK07688 339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 88.21
PRK09186256 flagellin modification protein A; Provisional 88.19
cd05213311 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain 88.12
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 88.02
PLN00141251 Tic62-NAD(P)-related group II protein; Provisional 87.79
PLN03209 576 translocon at the inner envelope of chloroplast su 87.73
COG0300265 DltE Short-chain dehydrogenases of various substra 87.69
PLN02780320 ketoreductase/ oxidoreductase 87.6
PLN02366 308 spermidine synthase 87.56
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 87.18
TIGR00518 370 alaDH alanine dehydrogenase. The family of known L 87.08
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 87.08
COG1648210 CysG Siroheme synthase (precorrin-2 oxidase/ferroc 86.98
PRK04148134 hypothetical protein; Provisional 86.96
PRK10637 457 cysG siroheme synthase; Provisional 86.94
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 86.8
PRK08267 260 short chain dehydrogenase; Provisional 86.74
cd05211217 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of 86.29
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 86.09
PRK08265261 short chain dehydrogenase; Provisional 85.95
PRK07326237 short chain dehydrogenase; Provisional 85.87
PRK08251248 short chain dehydrogenase; Provisional 85.81
PLN02823 336 spermine synthase 85.76
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 85.69
PRK14106 450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 85.59
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 85.44
PRK06194287 hypothetical protein; Provisional 85.37
PLN03209 576 translocon at the inner envelope of chloroplast su 85.35
TIGR01181 317 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This 85.25
PRK08267260 short chain dehydrogenase; Provisional 85.02
PLN02896353 cinnamyl-alcohol dehydrogenase 84.89
cd05213311 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain 84.72
PRK07831262 short chain dehydrogenase; Provisional 84.6
COG4262 508 Predicted spermidine synthase with an N-terminal m 84.53
PRK07074 257 short chain dehydrogenase; Provisional 84.39
PRK10538248 malonic semialdehyde reductase; Provisional 84.3
PRK09291257 short chain dehydrogenase; Provisional 84.25
TIGR00933390 2a38 potassium uptake protein, TrkH family. The pr 84.24
TIGR03589 324 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This 84.22
PRK06101240 short chain dehydrogenase; Provisional 84.05
PRK12829264 short chain dehydrogenase; Provisional 84.03
PRK07231251 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; 83.96
PRK07024257 short chain dehydrogenase; Provisional 83.73
PRK06138252 short chain dehydrogenase; Provisional 83.66
PRK05854313 short chain dehydrogenase; Provisional 83.5
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 83.48
PRK07063260 short chain dehydrogenase; Provisional 83.37
PLN02650351 dihydroflavonol-4-reductase 83.35
PRK06949258 short chain dehydrogenase; Provisional 83.32
TIGR03466328 HpnA hopanoid-associated sugar epimerase. The sequ 83.24
PRK06482276 short chain dehydrogenase; Provisional 83.14
PRK07062265 short chain dehydrogenase; Provisional 83.11
PF0380796 F420_oxidored: NADP oxidoreductase coenzyme F420-d 83.0
PLN02214 342 cinnamoyl-CoA reductase 82.96
TIGR03466 328 HpnA hopanoid-associated sugar epimerase. The sequ 82.95
PRK07454241 short chain dehydrogenase; Provisional 82.92
PLN00198 338 anthocyanidin reductase; Provisional 82.86
PLN00141 251 Tic62-NAD(P)-related group II protein; Provisional 82.74
PRK03612 521 spermidine synthase; Provisional 82.7
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 82.63
PLN02427386 UDP-apiose/xylose synthase 82.6
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 82.55
PLN032231634 Polycystin cation channel protein; Provisional 82.46
TIGR03589324 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This 82.43
PRK06200263 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog 82.33
PLN02989325 cinnamyl-alcohol dehydrogenase family protein 82.32
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 82.3
TIGR03649285 ergot_EASG ergot alkaloid biosynthesis protein, AF 82.28
PRK06940275 short chain dehydrogenase; Provisional 82.23
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 82.14
PRK07067257 sorbitol dehydrogenase; Provisional 82.12
PRK05565247 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; 82.02
PRK08309177 short chain dehydrogenase; Provisional 81.97
PRK05993277 short chain dehydrogenase; Provisional 81.87
PRK08340259 glucose-1-dehydrogenase; Provisional 81.79
PRK11908347 NAD-dependent epimerase/dehydratase family protein 81.68
PF00106167 adh_short: short chain dehydrogenase alcohol dehyd 81.65
PRK13940 414 glutamyl-tRNA reductase; Provisional 81.61
PRK07523255 gluconate 5-dehydrogenase; Provisional 81.56
PLN02583 297 cinnamoyl-CoA reductase 81.5
PRK06172253 short chain dehydrogenase; Provisional 81.37
PRK06182273 short chain dehydrogenase; Validated 81.3
PLN02427 386 UDP-apiose/xylose synthase 81.27
PRK08017256 oxidoreductase; Provisional 81.09
TIGR01035 417 hemA glutamyl-tRNA reductase. This enzyme, togethe 80.95
PRK06500249 short chain dehydrogenase; Provisional 80.95
PRK05476 425 S-adenosyl-L-homocysteine hydrolase; Provisional 80.87
PRK07666239 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; 80.82
PRK00045 423 hemA glutamyl-tRNA reductase; Reviewed 80.81
PLN00203 519 glutamyl-tRNA reductase 80.81
PLN02662322 cinnamyl-alcohol dehydrogenase family protein 80.64
PRK08306296 dipicolinate synthase subunit A; Reviewed 80.62
PRK12939250 short chain dehydrogenase; Provisional 80.6
TIGR01472 343 gmd GDP-mannose 4,6-dehydratase. Excluded from thi 80.53
PLN02214342 cinnamoyl-CoA reductase 80.38
PRK08643256 acetoin reductase; Validated 80.37
PLN02896 353 cinnamyl-alcohol dehydrogenase 80.16
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 80.15
PLN02928347 oxidoreductase family protein 80.14
TIGR00936 406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 80.14
KOG1014312 consensus 17 beta-hydroxysteroid dehydrogenase typ 80.11
PRK06924251 short chain dehydrogenase; Provisional 80.09
PRK06197306 short chain dehydrogenase; Provisional 80.06
PRK07097265 gluconate 5-dehydrogenase; Provisional 80.04
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
Probab=99.97  E-value=5.3e-30  Score=283.59  Aligned_cols=233  Identities=20%  Similarity=0.234  Sum_probs=188.7

Q ss_pred             HHHHHHHHHHHHhhhhhhccC------CCHHHHHHHHHHhhhcCCCCCC-cCCccChhhhhHHHHhHHHHHHHHHHHHHH
Q 004558          291 LLFATIFLIIFGGLALYAVSD------SSFAEALWLSWTFVADSGNHAD-RVGTGPRIVSVSISSGGMLIFAMMLGLVSD  363 (745)
Q Consensus       291 L~~~~l~liligt~~~~~ie~------~s~~dA~y~~~~tvTTvGygd~-~~t~~gRi~~v~lil~Gi~ifa~lig~It~  363 (745)
                      .++++..+++.|+++++++++      .++.|||||+++|+||+||||. |.+..||+|+++++++|+++|++.++.++.
T Consensus       140 ~~~~~~~l~~~~~~g~~~~~~~f~~~~~s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~  219 (393)
T PRK10537        140 AVISITSLLFYSTFGALYLGDGFSPPIESLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFG  219 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHccccCcCCCCHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334455666777777776664      6999999999999999999998 788899999999999999999988887765


Q ss_pred             -HHHHHHhhhccCcc-cccccCeEEEEccCccHHHHHHHHHHhcccCCCCeEEEEEcCChHHHHHHHHhhhcccCCccEE
Q 004558          364 -AISEKVDSLRKGKS-EVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVI  441 (745)
Q Consensus       364 -~i~~~l~~lr~G~~-~v~~k~HIVI~G~g~~g~~L~~eL~~~~~s~~~~~iVVLiD~d~e~le~~l~~~~~~~~~~~V~  441 (745)
                       .+.+++++..+++. ....++|+||||||+.|..++++|.+.+      .+|+++|+|+.  ++..        ..++.
T Consensus       220 p~i~~~l~~~~~~~~~~~~~k~HvII~G~g~lg~~v~~~L~~~g------~~vvVId~d~~--~~~~--------~~g~~  283 (393)
T PRK10537        220 PVIRGNLKRLVKGRISHMHRKDHFIICGHSPLAINTYLGLRQRG------QAVTVIVPLGL--EHRL--------PDDAD  283 (393)
T ss_pred             HHHHHHHHHHHHhhhhhcccCCeEEEECCChHHHHHHHHHHHCC------CCEEEEECchh--hhhc--------cCCCc
Confidence             55555555433332 2345899999999999999999997643      57888887642  2221        23467


Q ss_pred             EEEeCCCCHHHHhccCcccccEEEEecCCCCCCcchHHHHHHHHHHhhhcCCCCceEEEEecCCCCHHHHHHcCCCeeeE
Q 004558          442 CRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIET  521 (745)
Q Consensus       442 ~i~Gd~t~~e~L~rAgI~~A~aVIiltdd~~~~~sD~~NI~~~Lsar~l~p~~~~~IIArv~d~e~~~~l~~aGad~Ve~  521 (745)
                      ++.||++++++|++||+++|+++|++++      +|++|+.+++++|+++|+  .++||++.++++.++++.+|+|.|  
T Consensus       284 vI~GD~td~e~L~~AgI~~A~aVI~~t~------dD~~Nl~ivL~ar~l~p~--~kIIa~v~~~~~~~~L~~~GaD~V--  353 (393)
T PRK10537        284 LIPGDSSDSAVLKKAGAARARAILALRD------NDADNAFVVLAAKEMSSD--VKTVAAVNDSKNLEKIKRVHPDMI--  353 (393)
T ss_pred             EEEeCCCCHHHHHhcCcccCCEEEEcCC------ChHHHHHHHHHHHHhCCC--CcEEEEECCHHHHHHHHhcCCCEE--
Confidence            8999999999999999999999999995      599999999999999985  589999999999999999999984  


Q ss_pred             EccHHHHHHHHHHHHcCCcH-HHHHHHHh
Q 004558          522 VVAHDVIGRLMIQCALQPGL-AQIWEDIL  549 (745)
Q Consensus       522 V~s~el~a~lLaq~~~~Pg~-~~Vl~~Ll  549 (745)
                      |++.++.++.|++.+..+.+ .+.+.+++
T Consensus       354 Isp~~l~g~~la~~l~g~~I~~~~i~~~~  382 (393)
T PRK10537        354 FSPQLLGSELLARTLNGEEIDNDMITSML  382 (393)
T ss_pred             ECHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            77777889999999987655 34555555



>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>PF06241 DUF1012: Protein of unknown function (DUF1012); InterPro: IPR010420 This entry represents the CASTOR/POLLUX/SYM8 family of ion channels, which are found in plants Back     alignment and domain information
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria [] Back     alignment and domain information
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02080 TrkA_C: TrkA-C domain; InterPro: IPR006037 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG3400 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03493 BK_channel_a: Calcium-activated BK potassium channel alpha subunit; InterPro: IPR003929 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>COG3273 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase Back     alignment and domain information
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>CHL00194 ycf39 Ycf39; Provisional Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0168 TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK01581 speE spermidine synthase; Validated Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PRK00536 speE spermidine synthase; Provisional Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA Back     alignment and domain information
>CHL00194 ycf39 Ycf39; Provisional Back     alignment and domain information
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Back     alignment and domain information
>PRK06914 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>PRK09186 flagellin modification protein A; Provisional Back     alignment and domain information
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional Back     alignment and domain information
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional Back     alignment and domain information
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] Back     alignment and domain information
>PLN02780 ketoreductase/ oxidoreductase Back     alignment and domain information
>PLN02366 spermidine synthase Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK08267 short chain dehydrogenase; Provisional Back     alignment and domain information
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK08265 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK07326 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK08251 short chain dehydrogenase; Provisional Back     alignment and domain information
>PLN02823 spermine synthase Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK06194 hypothetical protein; Provisional Back     alignment and domain information
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional Back     alignment and domain information
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase Back     alignment and domain information
>PRK08267 short chain dehydrogenase; Provisional Back     alignment and domain information
>PLN02896 cinnamyl-alcohol dehydrogenase Back     alignment and domain information
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase Back     alignment and domain information
>PRK07831 short chain dehydrogenase; Provisional Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PRK07074 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK10538 malonic semialdehyde reductase; Provisional Back     alignment and domain information
>PRK09291 short chain dehydrogenase; Provisional Back     alignment and domain information
>TIGR00933 2a38 potassium uptake protein, TrkH family Back     alignment and domain information
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase Back     alignment and domain information
>PRK06101 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK12829 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Back     alignment and domain information
>PRK07024 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK06138 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK05854 short chain dehydrogenase; Provisional Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PRK07063 short chain dehydrogenase; Provisional Back     alignment and domain information
>PLN02650 dihydroflavonol-4-reductase Back     alignment and domain information
>PRK06949 short chain dehydrogenase; Provisional Back     alignment and domain information
>TIGR03466 HpnA hopanoid-associated sugar epimerase Back     alignment and domain information
>PRK06482 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK07062 short chain dehydrogenase; Provisional Back     alignment and domain information
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain Back     alignment and domain information
>PLN02214 cinnamoyl-CoA reductase Back     alignment and domain information
>TIGR03466 HpnA hopanoid-associated sugar epimerase Back     alignment and domain information
>PRK07454 short chain dehydrogenase; Provisional Back     alignment and domain information
>PLN00198 anthocyanidin reductase; Provisional Back     alignment and domain information
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PLN02427 UDP-apiose/xylose synthase Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>PLN03223 Polycystin cation channel protein; Provisional Back     alignment and domain information
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase Back     alignment and domain information
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional Back     alignment and domain information
>PLN02989 cinnamyl-alcohol dehydrogenase family protein Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family Back     alignment and domain information
>PRK06940 short chain dehydrogenase; Provisional Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK07067 sorbitol dehydrogenase; Provisional Back     alignment and domain information
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Back     alignment and domain information
>PRK08309 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK05993 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK08340 glucose-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional Back     alignment and domain information
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases Back     alignment and domain information
>PRK13940 glutamyl-tRNA reductase; Provisional Back     alignment and domain information
>PRK07523 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>PLN02583 cinnamoyl-CoA reductase Back     alignment and domain information
>PRK06172 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK06182 short chain dehydrogenase; Validated Back     alignment and domain information
>PLN02427 UDP-apiose/xylose synthase Back     alignment and domain information
>PRK08017 oxidoreductase; Provisional Back     alignment and domain information
>TIGR01035 hemA glutamyl-tRNA reductase Back     alignment and domain information
>PRK06500 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Back     alignment and domain information
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed Back     alignment and domain information
>PLN00203 glutamyl-tRNA reductase Back     alignment and domain information
>PLN02662 cinnamyl-alcohol dehydrogenase family protein Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PRK12939 short chain dehydrogenase; Provisional Back     alignment and domain information
>TIGR01472 gmd GDP-mannose 4,6-dehydratase Back     alignment and domain information
>PLN02214 cinnamoyl-CoA reductase Back     alignment and domain information
>PRK08643 acetoin reductase; Validated Back     alignment and domain information
>PLN02896 cinnamyl-alcohol dehydrogenase Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>PLN02928 oxidoreductase family protein Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] Back     alignment and domain information
>PRK06924 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK06197 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK07097 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
3rbz_A340 Mthk Channel, Ca2+-Bound Length = 340 7e-06
1lnq_A336 Crystal Structure Of Mthk At 3.3 A Length = 336 9e-06
3rbx_A234 Mthk Rck Domain D184n Mutant, Ca2+-Bound Length = 2 1e-05
2fy8_A230 Crystal Structure Of Mthk Rck Domain In Its Ligand- 1e-05
4ei2_A242 Crystal Structures Of Mthk Rck Gating Ring Bound To 1e-05
2aef_A234 Crystal Structures Of The Mthk Rck Domain In Ca2+ B 1e-05
2ogu_A233 Crystal Structure Of The Isolated Mthk Rck Domain L 2e-05
3kxd_A224 Crystal Structure Of The Mthk Rck In Complex With C 3e-05
>pdb|3RBZ|A Chain A, Mthk Channel, Ca2+-Bound Length = 340 Back     alignment and structure

Iteration: 1

Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 37/322 (11%) Query: 306 LYAVSDSSFAEA----LWLSWTFVA-DSGNHADRVGTGP--RIVSVSISSGGMLIFAMML 358 +Y + F E + L WTFV + + D + P +V++ G+ FA+ + Sbjct: 32 IYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIATFAVAV 91 Query: 359 GLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAE 418 + + + G +V + H++I GWS+ L++L G + VLAE Sbjct: 92 ARLLTFLINREQMKLIGLIDVAKSRHVVICGWSESTLECLRELR-------GSEVFVLAE 144 Query: 419 RDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDA 478 E + + + +F+ G P ++DL+K +V ARA+IV +SD+ Sbjct: 145 --DENVRKKVLRSGANFV-------HGDPTRVSDLEKANVRGARAVIV------DLESDS 189 Query: 479 RALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQ 538 + +L + + E +R ++ E +N +++ G + + + + GRLM + Sbjct: 190 ETIHCILGIRKIDESVR--IIAEAERYENIEQLRMAGAD--QVISPFVISGRLMSRSIDD 245 Query: 539 PGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVI---SFPDAIPCGIKVAAEGGKIIL 595 A +D+L E+ ++ P + + E V + D I G ++I+ Sbjct: 246 GYEAMFVQDVLAEESTRRMVE-VPIPEGSKLEGVSVLDADIHDVTGVIIIGVGRGDELII 304 Query: 596 NPDDNYVLKEGDEVLVIAEDDD 617 +P +Y + GD +L I + ++ Sbjct: 305 DPPRDYSFRAGDIILGIGKPEE 326
>pdb|1LNQ|A Chain A, Crystal Structure Of Mthk At 3.3 A Length = 336 Back     alignment and structure
>pdb|3RBX|A Chain A, Mthk Rck Domain D184n Mutant, Ca2+-Bound Length = 234 Back     alignment and structure
>pdb|2FY8|A Chain A, Crystal Structure Of Mthk Rck Domain In Its Ligand-Free Gating-Ring Form Length = 230 Back     alignment and structure
>pdb|4EI2|A Chain A, Crystal Structures Of Mthk Rck Gating Ring Bound To Barium Length = 242 Back     alignment and structure
>pdb|2AEF|A Chain A, Crystal Structures Of The Mthk Rck Domain In Ca2+ Bound Form Length = 234 Back     alignment and structure
>pdb|2OGU|A Chain A, Crystal Structure Of The Isolated Mthk Rck Domain Length = 233 Back     alignment and structure
>pdb|3KXD|A Chain A, Crystal Structure Of The Mthk Rck In Complex With Cadmium Length = 224 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
1lnq_A336 MTHK channels, potassium channel related protein; 2e-48
3naf_A 798 Calcium-activated potassium channel subunit alpha; 9e-45
3mt5_A 726 Potassium large conductance calcium-activated CHA 1e-38
3mt5_A726 Potassium large conductance calcium-activated CHA 3e-04
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 4e-17
1id1_A153 Putative potassium channel protein; RCK domain, E. 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
3ldc_A82 Calcium-gated potassium channel MTHK; transmembran 4e-05
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 4e-04
3eff_K139 Voltage-gated potassium channel; FULL length KCSA, 6e-04
2k1e_A103 Water soluble analogue of potassium channel, KCSA; 6e-04
2a9h_A155 Voltage-gated potassium channel; potassium channel 7e-04
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Length = 336 Back     alignment and structure
 Score =  173 bits (439), Expect = 2e-48
 Identities = 68/341 (19%), Positives = 145/341 (42%), Gaps = 41/341 (12%)

Query: 286 AKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADS----GNHADRVGTGPRI 341
                +L   + +II+G    + +   S+  +L+  WTFV  +    G+++     G   
Sbjct: 18  VPATRILLLVLAVIIYGTAGFHFIEGESWTVSLY--WTFVTIATVGYGDYSPSTPLG-MY 74

Query: 342 VSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQL 401
            +V++   G+  FA+ +  + + +  +      G  +V +  H++I GWS+     L++L
Sbjct: 75  FTVTLIVLGIGTFAVAVERLLEFLINREQMKLMGLIDVAKSRHVVICGWSESTLECLREL 134

Query: 402 AVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKA 461
                  G  V V+  + +  +        +    G + +   G P  ++DL+K +V  A
Sbjct: 135 R------GSEVFVLAEDENVRK--------KVLRSGANFV--HGDPTRVSDLEKANVRGA 178

Query: 462 RAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIET 521
           RA+IV          D+  +  +L +  + E +   ++ E    +N   +++ G +  + 
Sbjct: 179 RAVIVDLES------DSETIHCILGIRKIDESV--RIIAEAERYENIEQLRMAGAD--QV 228

Query: 522 VVAHDVIGRLMIQCALQPGLAQIWEDILGFEN----AEFYIKRWPQLDDLRFEEVVI-SF 576
           +    + GRLM +       A   +D+L  E+     E  I    +L+ +   +  I   
Sbjct: 229 ISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTRRMVEVPIPEGSKLEGVSVLDADIHDV 288

Query: 577 PDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDD 617
              I  G+     G ++I++P  +Y  + GD +L I + ++
Sbjct: 289 TGVIIIGVG---RGDELIIDPPRDYSFRAGDIILGIGKPEE 326


>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens} Length = 798 Back     alignment and structure
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A Length = 726 Back     alignment and structure
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A Length = 726 Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Length = 234 Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 3r65_A 3ous_A 3ldd_A Length = 82 Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Length = 122 Back     alignment and structure
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans} Length = 139 Back     alignment and structure
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A Length = 103 Back     alignment and structure
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Length = 155 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 745
d1lnqa280 f.14.1.1 (A:19-98) Potassium channel-related prote 1e-06
d1r3jc_103 f.14.1.1 (C:) Potassium channel protein {Streptomy 6e-06
d1xl4a2116 f.14.1.1 (A:23-138) Inward rectifier potassium cha 9e-05
d1p7ba2116 f.14.1.1 (A:36-151) Inward rectifier potassium cha 1e-04
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 80 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 13/77 (16%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 291 LLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGP--RIVSVSISS 348
           +L   + +II+G    + +   S+  +L+ ++  +A +  + D   + P     +V++  
Sbjct: 5   ILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIA-TVGYGDYSPSTPLGMYFTVTLIV 63

Query: 349 GGMLIFAMMLGLVSDAI 365
            G+  FA+ +  + + +
Sbjct: 64  LGIGTFAVAVERLLEFL 80


>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Length = 103 Back     information, alignment and structure
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Length = 116 Back     information, alignment and structure
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Length = 116 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query745
d1id1a_153 Rck domain from putative potassium channel Kch {Es 99.89
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 99.82
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 99.8
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 99.69
d1r3jc_103 Potassium channel protein {Streptomyces coelicolor 99.47
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 99.21
d1id1a_153 Rck domain from putative potassium channel Kch {Es 99.15
d1p7ba2116 Inward rectifier potassium channel Kirbac1.1 {Burk 99.12
d1xl4a2116 Inward rectifier potassium channel kirbac3.1 {Magn 99.12
d1lnqa280 Potassium channel-related protein MthK {Archaeon M 99.0
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 98.94
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 98.72
d2fy8a292 Potassium channel-related protein MthK, C-terminal 98.22
d1vcta294 Hypothetical protein PH0236, C-terminal domain {Py 98.08
d2h8pc157 Potassium channel protein {Streptomyces coelicolor 98.0
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 97.23
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 97.16
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 96.67
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 96.45
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 96.44
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 96.41
d1xg5a_257 Putative dehydrogenase ARPG836 (MGC4172) {Human (H 95.75
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 95.71
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 95.68
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 95.64
d1xgka_350 Negative transcriptional regulator NmrA {Aspergill 95.31
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 95.22
d2a4ka1241 beta-keto acyl carrier protein reductase {Thermus 94.97
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 94.96
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 94.91
d1oaaa_259 Sepiapterin reductase {Mouse (Mus musculus) [TaxId 94.86
d1inla_295 Spermidine synthase {Thermotoga maritima [TaxId: 2 94.86
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 94.83
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 94.77
d1xj5a_290 Spermidine synthase {Thale cress (Arabidopsis thal 94.75
d1hdca_254 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre 94.73
d2b2ca1312 Spermidine synthase {Caenorhabditis elegans [TaxId 94.68
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 94.62
d1bdba_276 Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps 94.61
d2c07a1251 beta-keto acyl carrier protein reductase {Malaria 94.58
d2o07a1285 Spermidine synthase {Human (Homo sapiens) [TaxId: 94.53
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 94.51
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 94.48
d2gdza1254 15-hydroxyprostaglandin dehydrogenase, PGDH {Human 94.46
d2ae2a_259 Tropinone reductase {Jimsonweed (Datura stramonium 94.42
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 94.41
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 94.4
d1iy8a_258 Levodione reductase {Corynebacterium aquaticum [Ta 94.37
d1iy9a_274 Spermidine synthase {Bacillus subtilis [TaxId: 142 94.32
d1yb1a_244 17-beta-hydroxysteroid dehydrogenase type XI {Huma 94.29
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 94.17
d1xkqa_272 Hypothetical protein R05D8.7 {Caenorhabditis elega 93.93
d1zema1260 Xylitol dehydrogenase {Gluconobacter oxydans [TaxI 93.88
d1hxha_253 3beta/17beta hydroxysteroid dehydrogenase {Comamon 93.86
d2blla1342 Polymyxin resistance protein ArnA (PrmI) {Escheric 93.79
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 93.78
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 93.68
d1uira_312 Spermidine synthase {Thermus thermophilus [TaxId: 93.66
d1xhla_274 Hypothetical protein F25D1.5 {Caenorhabditis elega 93.59
d2rhca1257 beta-keto acyl carrier protein reductase {Streptom 93.51
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 93.42
d1spxa_264 Glucose dehydrogenase (5l265) {Nematode (Caenorhab 93.4
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 93.4
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 93.36
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 93.34
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 93.28
d1mjfa_276 Putative spermidine synthetase PF0127 (SpeE) {Arch 93.02
d1fmca_255 7-alpha-hydroxysteroid dehydrogenase {Escherichia 93.01
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 92.84
d1zk4a1251 R-specific alcohol dehydrogenase {Lactobacillus br 92.78
d1udca_338 Uridine diphosphogalactose-4-epimerase (UDP-galact 92.69
d1orra_338 CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 92.69
d1xq1a_259 Tropinone reductase {Thale cress (Arabidopsis thal 92.41
d1wmaa1275 Carbonyl reductase/20beta-hydroxysteroid dehydroge 92.37
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 92.29
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 92.26
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 92.23
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 92.21
d1i24a_393 Sulfolipid biosynthesis protein SQD1 {Thale cress 92.2
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 92.17
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 92.11
d1ulsa_242 beta-keto acyl carrier protein reductase {Thermus 92.07
d2bgka1268 Rhizome secoisolariciresinol dehydrogenase {Mayapp 92.06
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 91.94
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 91.87
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 91.86
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 91.68
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 91.66
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 91.64
d1yxma1297 Peroxisomal trans 2-enoyl CoA reductase {Human (Ho 91.5
d1yo6a1250 Putative carbonyl reductase sniffer {Caenorhabditi 91.46
d1cyda_242 Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 91.45
d1xgka_350 Negative transcriptional regulator NmrA {Aspergill 91.34
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 91.27
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 91.18
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 91.18
d1udca_338 Uridine diphosphogalactose-4-epimerase (UDP-galact 91.03
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 91.01
d2bd0a1240 Bacterial sepiapterin reductase {Chlorobium tepidu 90.93
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 90.92
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 90.91
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 90.86
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 90.67
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 90.37
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 90.31
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 90.25
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 90.13
d2blla1342 Polymyxin resistance protein ArnA (PrmI) {Escheric 89.86
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 89.7
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 89.57
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 89.2
d1rpna_321 GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos 89.12
d2ew8a1247 (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb 89.02
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 88.88
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 88.83
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 88.7
d1x1ta1260 D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas 88.47
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 88.42
d1yo6a1250 Putative carbonyl reductase sniffer {Caenorhabditi 88.31
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 88.13
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 87.97
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 87.7
d2c5aa1363 GDP-mannose-3', 5'-epimerase {Thale cress (Arabido 87.57
d1snya_248 Carbonyl reductase sniffer {Fruit fly (Drosophila 87.45
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 87.26
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 87.13
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 86.98
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 86.71
d1y1pa1342 Aldehyde reductase II {Sporobolomyces salmonicolor 86.33
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 86.14
d1oc2a_346 dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus 85.67
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 85.55
d1db3a_357 GDP-mannose 4,6-dehydratase {Escherichia coli [Tax 84.66
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 84.35
d1sb8a_341 UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo 84.34
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 84.31
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 84.2
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 84.19
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 84.01
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 83.85
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 83.71
d1ulua_256 Enoyl-ACP reductase {Thermus thermophilus [TaxId: 83.63
d1gy8a_383 Uridine diphosphogalactose-4-epimerase (UDP-galact 83.51
d2bkaa1232 TAT-interacting protein TIP30 {Human (Homo sapiens 83.43
d1kewa_361 dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus 83.43
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 83.18
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 82.81
d1j4aa1197 D-lactate dehydrogenase {Lactobacillus helveticus 82.64
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 82.08
d1t2aa_347 GDP-mannose 4,6-dehydratase {Human (Homo sapiens) 81.51
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 81.47
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 81.43
d1g0oa_272 1,3,8-trihydroxynaphtalene reductase (THNR, naphto 81.31
d1n7ha_339 GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop 81.28
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 81.03
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 80.99
d1xu9a_269 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom 80.92
d1geea_261 Glucose dehydrogenase {Bacillus megaterium [TaxId: 80.79
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 80.11
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]
Probab=99.89  E-value=2.9e-22  Score=156.62  Aligned_cols=149  Identities=21%  Similarity=0.236  Sum_probs=125.1

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCC
Q ss_conf             04729999237628999999998111599980799996993789999982100248962899996799988885268556
Q 004558          381 EKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSK  460 (745)
Q Consensus       381 ~k~HIIIiG~g~~g~~Li~eL~~~~e~~~~~~iVVLiD~d~e~ie~~l~~~~~~~~~~~V~~i~GD~t~~e~L~rAgI~~  460 (745)
                      .+|||||||||+.|..++++|.+.+      ..|+++|.|++......++.    ...++.++.||++++++|++|++++
T Consensus         2 ~knHiII~G~g~~g~~l~~~L~~~~------~~v~vId~d~~~~~~~~~~~----~~~~~~vi~Gd~~d~~~L~~a~i~~   71 (153)
T d1id1a_           2 RKDHFIVCGHSILAINTILQLNQRG------QNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDSSVLKKAGIDR   71 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTT------CCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSHHHHHHHTTTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCC------CCEEEEECCCHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHCCCC
T ss_conf             9887999898889999999999769------98799953305589999985----3399689990686467797735402


Q ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC
Q ss_conf             43899944899877114999999999953128987519999569999888987499836687048999999999970885
Q 004558          461 ARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG  540 (745)
Q Consensus       461 A~aIIiltdd~~~~~sD~~NI~~~Lsak~l~p~~~~~IIArv~d~e~~~~lk~~Gad~Ve~I~s~el~a~lLaq~~~~Pg  540 (745)
                      |+++|+++++      |+.|+.+++.+|+++|.  .++|+++.++++.+.++.+|+|.|  +.+..+.++.+++.+..++
T Consensus        72 a~~vi~~~~~------d~~n~~~~~~~r~~~~~--~~iia~~~~~~~~~~l~~~Gad~v--i~p~~~~~~~l~~~l~~~~  141 (153)
T d1id1a_          72 CRAILALSDN------DADNAFVVLSAKDMSSD--VKTVLAVSDSKNLNKIKMVHPDII--LSPQLFGSEILARVLNGEE  141 (153)
T ss_dssp             CSEEEECSSC------HHHHHHHHHHHHHHTSS--SCEEEECSSGGGHHHHHTTCCSEE--ECHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEECCCC------HHHHHHHHHHHHHHCCC--CCEEEEECCHHHHHHHHHCCCCEE--ECHHHHHHHHHHHHHCCCC
T ss_conf             8799990454------88888999999985898--736999769889999997799999--9889999999999847589


Q ss_pred             HHH-HHHHHH
Q ss_conf             799-999983
Q 004558          541 LAQ-IWEDIL  549 (745)
Q Consensus       541 ~~~-Vl~~Ll  549 (745)
                      +.+ .+.+++
T Consensus       142 v~~~~~~~~l  151 (153)
T d1id1a_         142 INNDMLVSML  151 (153)
T ss_dssp             CCHHHHHHTT
T ss_pred             CCHHHHHHHH
T ss_conf             8878999985



>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Back     information, alignment and structure
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fy8a2 d.286.1.1 (A:245-336) Potassium channel-related protein MthK, C-terminal domain {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1vcta2 d.286.1.1 (A:108-201) Hypothetical protein PH0236, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Back     information, alignment and structure
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Back     information, alignment and structure
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Back     information, alignment and structure
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Back     information, alignment and structure
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure