Citrus Sinensis ID: 004561

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MEEFKGQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
cccccccccccccccccccccccccEEEEEEEEccccEEEcccccccEEEcccEEEEEEEccccccHHHHHHHHccccEEEEccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccEEccccHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHcccccEEEEEEEEccEEEEEEEcccccccccccEEEEEEEEEEcccccccccccccccccEEcccccccccccccccccEEEEccccEEEEEEEccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc
cccccccccHHHHHcccccccccEEEEEEEEEEccccEEEccccccccccccccEEEEEcccccccEEEEEEEEEccccEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccHHccHHHcccEEEEHHHHHHcccccccHcccccccHHHHHHHHHccEcccEEEccHHHHHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEEEcccEEEEEEEEEcccccccccEEEEEEEEEEccccccccEEcccccccEEccccccEEEccccccccEEEEccccEEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccc
meefkgqppdarrcfpcwdepackatfkiTLDVPselvalsnmpvidekvdgnmktvsyqespimSTYLVAVVIGLFDYvedhtsdgiKVRVYCQVGKANQGKFALNVAVKTLELYKEYfavpyslpkldmiaipdfaAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEglrldglaeshpievevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALeegsgepvnKLMNSwtkqkgypvisvKVKEEKLELeqsqflssgspgdgqwivpitlccgsydvcknfllynksdsfdikELLGcsiskegdnggwiklnvnqtgfyrvkYDKDLAARLGYAIEMKQlsetdrfgildDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAeklgwdskpgeshlDALLRGEIFTALALLGHKETLNEASKRFHAFLadrttpllppdiRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSivspfasyEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
meefkgqppdarrcfpCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEvevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQflssgspgdgQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCsiskegdnggwIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQkvsasdrsgyeSLLRVYRETDLSQEKTRILsslascpdVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVesirneghlaeavkelayrky
MEEFKGQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIsvkvkeekleleqsqflssGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
************RCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE*****VNKLMNSWTKQKGYPVISVKV*******************DGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAV********
MEEFKGQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRC******TLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR**
**********ARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
*****GQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEEFKGQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query745 2.2.26 [Sep-21-2011]
Q11011920 Puromycin-sensitive amino yes no 0.948 0.768 0.458 1e-180
P55786919 Puromycin-sensitive amino yes no 0.939 0.761 0.461 1e-179
P37898856 Alanine/arginine aminopep yes no 0.943 0.821 0.360 1e-128
Q95334942 Glutamyl aminopeptidase O no no 0.940 0.744 0.364 1e-123
P32454952 Aminopeptidase 2, mitocho no no 0.953 0.745 0.353 1e-123
Q07075957 Glutamyl aminopeptidase O no no 0.943 0.734 0.363 1e-123
Q32LQ0956 Glutamyl aminopeptidase O no no 0.944 0.736 0.360 1e-122
Q9USX1882 Aminopeptidase 1 OS=Schiz yes no 0.942 0.795 0.352 1e-121
P50123945 Glutamyl aminopeptidase O no no 0.934 0.736 0.346 1e-120
Q59KZ1924 Aminopeptidase 2 OS=Candi N/A no 0.939 0.757 0.350 1e-119
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 Back     alignment and function desciption
 Score =  632 bits (1631), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 339/740 (45%), Positives = 459/740 (62%), Gaps = 33/740 (4%)

Query: 10  DARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV---DGNMKTVSYQESPIMS 66
           DARR FPCWDEPA KATF I+L VP + VALSNM VID K    D N+  V +  +P+MS
Sbjct: 184 DARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPVMS 243

Query: 67  TYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSL 126
           TYLVA V+G +D+VE  + DG+ VRVY  VGKA QGKFAL VA KTL  YK+YF VPY L
Sbjct: 244 TYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPL 303

Query: 127 PKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 186
           PK+D+IAI DFAAGAMEN+GLVTYRETALL D ++S ++++Q VA VV HELAHQWFGNL
Sbjct: 304 PKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNL 363

Query: 187 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD-ECTEGLRLDGLAESHPIEVE 245
           VTMEWWTHLWLNEGFA+W+ YL  D  FPE+ IWTQF+  + T    LD L  SHPIEV 
Sbjct: 364 VTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVS 423

Query: 246 VNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAAL 305
           V H  E+DEIFDAISY KGASVIRML +Y+G + F++ +  Y+ K+   NA TEDLW +L
Sbjct: 424 VGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESL 483

Query: 306 EEGSGEPVNKLMNSWTKQKGYPVISVKVKEEK----LELEQSQFLSSGSPGD---GQWIV 358
           E  SG+P+  +MN+WTKQ G+P+I V+ ++ +    L+L Q +F +SG  G     QW+V
Sbjct: 484 ESASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRVLKLSQKKFCASGPYGGEDCPQWMV 543

Query: 359 PITLCCG-SYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYD 417
           PIT+      +  K  +L +K +           + K      W+KLN+   GFYR +Y 
Sbjct: 544 PITISTSEDPNQAKLKILMDKPEM--------SVVLKNVKPDQWVKLNLGTVGFYRTQYS 595

Query: 418 KDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSN 477
             +   L   I    L   DR G+ +D F+L  A   +   +L +M ++  E  YTV S+
Sbjct: 596 SAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSD 655

Query: 478 LITISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFT 536
           L   S  +G ++   +  +  + +++F   +F    E+LGWD KPGE HLDALLRG +  
Sbjct: 656 L---SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLG 712

Query: 537 ALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRV 596
            L   GHK TL EA +RF   +  +   +L  D+R   Y+ V++     D +  + +L++
Sbjct: 713 KLGKAGHKATLEEARRRFKEHVEGKQ--ILSADLRSPVYLTVLKH---GDGATLDIMLKL 767

Query: 597 YRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVY---GLA-VSIEGRET 652
           +++ D+ +EK RI   L +     ++ +VL F LS EVR QD V    G+A  S  GR+ 
Sbjct: 768 HKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKA 827

Query: 653 AWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQ 712
           AWK++KDNW+ +   +  GFLI+R I   V  FA  +   EV+ FF S   P   RT++Q
Sbjct: 828 AWKFIKDNWEELHNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQ 887

Query: 713 SIERVQINAKWVESIRNEGH 732
             E + +NA W++   +  H
Sbjct: 888 CCENILLNAAWLKRDADSIH 907
Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 Back     alignment and function description
>sp|P37898|AAP1_YEAST Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1 Back     alignment and function description
>sp|P32454|APE2_YEAST Aminopeptidase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE2 PE=1 SV=4 Back     alignment and function description
>sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3 Back     alignment and function description
>sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1 Back     alignment and function description
>sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 Back     alignment and function description
>sp|P50123|AMPE_RAT Glutamyl aminopeptidase OS=Rattus norvegicus GN=Enpep PE=1 SV=2 Back     alignment and function description
>sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
225429582 880 PREDICTED: puromycin-sensitive aminopept 0.991 0.839 0.835 0.0
147772895 880 hypothetical protein VITISV_012143 [Viti 0.991 0.839 0.834 0.0
343887278 911 aminopeptidase [Citrus unshiu] 0.934 0.763 0.823 0.0
255550101 870 puromycin-sensitive aminopeptidase, puta 0.985 0.843 0.810 0.0
356507019 873 PREDICTED: puromycin-sensitive aminopept 0.987 0.843 0.792 0.0
356514669 873 PREDICTED: puromycin-sensitive aminopept 0.986 0.841 0.789 0.0
357465783 876 Puromycin-sensitive aminopeptidase [Medi 0.991 0.843 0.778 0.0
449486688 886 PREDICTED: LOW QUALITY PROTEIN: puromyci 0.991 0.834 0.770 0.0
22329112 879 aminopeptidase M1 [Arabidopsis thaliana] 0.986 0.836 0.771 0.0
297798638 879 hypothetical protein ARALYDRAFT_491378 [ 0.986 0.836 0.768 0.0
>gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1307 bits (3383), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/743 (83%), Positives = 678/743 (91%), Gaps = 4/743 (0%)

Query: 7   QPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMS 66
           +P DARRCFPCWDEPACKATFKITLDVPS+L+ALSNMPVI+EK +G++KTVSYQESPIMS
Sbjct: 138 EPADARRCFPCWDEPACKATFKITLDVPSDLIALSNMPVIEEKPNGHLKTVSYQESPIMS 197

Query: 67  TYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSL 126
           TYLVAVVIGLFDYVEDHT DGIKVRVYCQVGKA+QGKFAL+VAVKTL LYKEYFA PYSL
Sbjct: 198 TYLVAVVIGLFDYVEDHTPDGIKVRVYCQVGKADQGKFALDVAVKTLGLYKEYFACPYSL 257

Query: 127 PKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 186
           PKLDMIAIPDFAAGAMENYGLVTYRETALLYD++HSAAANKQRVATVVAHELAHQWFGNL
Sbjct: 258 PKLDMIAIPDFAAGAMENYGLVTYRETALLYDEKHSAAANKQRVATVVAHELAHQWFGNL 317

Query: 187 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEV 246
           VTMEWWTHLWLNEGFATWVSYLAADSLFPEWK+WTQFLDE TEGLRLDGLAESHPIEVE+
Sbjct: 318 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKVWTQFLDESTEGLRLDGLAESHPIEVEI 377

Query: 247 NHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALE 306
           NH GEIDEIFDAISYRKGASVIRMLQ+YLGAECFQRSLASYIKK+ACSNAKTEDLWAALE
Sbjct: 378 NHAGEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKKHACSNAKTEDLWAALE 437

Query: 307 EGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGS 366
           EGSGEPVN+LMNSWTKQKGYPV+SVK+  +KLE EQ+QFLSSGS GDGQWIVPITLCCGS
Sbjct: 438 EGSGEPVNRLMNSWTKQKGYPVVSVKINNQKLEFEQTQFLSSGSQGDGQWIVPITLCCGS 497

Query: 367 YDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG----GWIKLNVNQTGFYRVKYDKDLAA 422
           YD   NFLL  KS+S D+KE LGC +    DN      WIKLNV+QTGFYRVKYD+ LAA
Sbjct: 498 YDTPHNFLLQTKSESLDMKEFLGCCVGGGNDNSIAVCSWIKLNVDQTGFYRVKYDEKLAA 557

Query: 423 RLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITIS 482
            L  AIE   LS TDRFGILDD FALCMA QQ+LTSLLTLM +Y EE +YTVLSNLI+IS
Sbjct: 558 GLRSAIEKNYLSATDRFGILDDSFALCMACQQSLTSLLTLMGAYREELDYTVLSNLISIS 617

Query: 483 YKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLG 542
           YK+ RIAADA PEL+DY+K+FFISLFQ SAEKLGW+ +PGE HLDA+LRGE+ TALA+ G
Sbjct: 618 YKVARIAADATPELVDYIKEFFISLFQYSAEKLGWEPRPGEGHLDAMLRGEVLTALAVFG 677

Query: 543 HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDL 602
           H  T+NEAS+RFHAFL DR TP+LPPDIRKAAYVAVMQ V+ S+RSGYESLLRVYRETDL
Sbjct: 678 HDLTINEASRRFHAFLDDRNTPVLPPDIRKAAYVAVMQNVTTSNRSGYESLLRVYRETDL 737

Query: 603 SQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWD 662
           SQEKTRIL SLASCPD NIVLEVLNF+LSSEVRSQDAV+GLAVS EGRETAW WLK+NWD
Sbjct: 738 SQEKTRILGSLASCPDPNIVLEVLNFVLSSEVRSQDAVFGLAVSREGRETAWSWLKNNWD 797

Query: 663 HISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAK 722
           +ISKTWGSGFLITRF+S+IVSPFAS+EK  EV+EFF++R KP IARTL+QSIERV INAK
Sbjct: 798 YISKTWGSGFLITRFVSAIVSPFASFEKASEVQEFFATRTKPSIARTLKQSIERVHINAK 857

Query: 723 WVESIRNEGHLAEAVKELAYRKY 745
           WVESI+NE HLA+A+KELAYRKY
Sbjct: 858 WVESIQNEKHLADAMKELAYRKY 880

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] Back     alignment and taxonomy information
>gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] Back     alignment and taxonomy information
>gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
TAIR|locus:2125904879 APM1 "aminopeptidase M1" [Arab 0.986 0.836 0.752 2.4e-309
ZFIN|ZDB-GENE-060524-3925 npepps "aminopeptidase puromyc 0.948 0.764 0.460 1.2e-166
UNIPROTKB|F1P456837 NPEPPS "Uncharacterized protei 0.951 0.847 0.452 8.1e-163
FB|FBgn02612431075 Psa "Puromycin sensitive amino 0.957 0.663 0.440 4.5e-162
MGI|MGI:1101358920 Npepps "aminopeptidase puromyc 0.938 0.759 0.455 8.4e-161
UNIPROTKB|E1BP91921 NPEPPS "Uncharacterized protei 0.939 0.760 0.454 1.7e-160
UNIPROTKB|F1M9V7920 Npepps "Protein Npepps" [Rattu 0.938 0.759 0.455 1.7e-160
UNIPROTKB|F1P7M0860 NPEPPS "Uncharacterized protei 0.939 0.813 0.452 4.6e-160
UNIPROTKB|E9PLK3915 NPEPPS "Puromycin-sensitive am 0.939 0.765 0.454 4.6e-160
UNIPROTKB|P55786919 NPEPPS "Puromycin-sensitive am 0.939 0.761 0.454 4.6e-160
TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2946 (1042.1 bits), Expect = 2.4e-309, Sum P(2) = 2.4e-309
 Identities = 557/740 (75%), Positives = 635/740 (85%)

Query:     7 QPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMS 66
             +P DARRCFPCWDEPACKATFKITL+VP++LVALSNMP+++EKV+GN+K VSYQESPIMS
Sbjct:   138 EPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESPIMS 197

Query:    67 TYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSL 126
             TYLVA+V+GLFDYVEDHTSDGIKVRVYCQVGKA+QGKFAL+V  KTL+L+KEYFAVPY L
Sbjct:   198 TYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPL 257

Query:   127 PKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 186
             PK+DMIAIPDFAAGAMENYGLVTYRETALLYD+QHSAA+NKQRVATVVAHELAHQWFGNL
Sbjct:   258 PKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNL 317

Query:   187 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEV 246
             VTMEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TEGLRLDGL ESHPIEVEV
Sbjct:   318 VTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEV 377

Query:   247 NHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALE 306
             NH  EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+SLA+YIK +A SNAKTEDLWAALE
Sbjct:   378 NHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALE 437

Query:   307 EGSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXXXXXXXGSPGDGQWIVPITLCCGS 366
              GSGEPVNKLM+SWTKQKGYPV+                   GSPG+GQWIVP+TLCCGS
Sbjct:   438 AGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGS 497

Query:   367 YDVCKNFLLYNKSDSFDIKELLGCSISKEGD--NG--GWIKLNVNQTGFYRVKYDKDLAA 422
             Y+  KNFLL +KS ++D+KELLGCSI+   D  NG   WIK+NV+Q GFYRVKYD  LAA
Sbjct:   498 YEKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAA 557

Query:   423 RLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITIS 482
              L  A E + L+  DR+GILDD FAL MARQQ+L SLLTL ++Y +E +YTVLSNLI IS
Sbjct:   558 GLRNATESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAIS 617

Query:   483 YKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLG 542
             YK+ +I ADA  EL+  +K FFI +FQ +A KLGWD K GESHLDA+LRGE+ TALA+ G
Sbjct:   618 YKVVKIGADANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFG 677

Query:   543 HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDL 602
             H ETL EA +RF AFLADR TPLLPPDIR+AAYVAVMQ+ + SD+SGYESLLRVYRETDL
Sbjct:   678 HDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDL 737

Query:   603 SQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIEGRETAWKWLKDNW 661
             SQEKTRIL SLASCPD  IV +VLNF+LS EVR+QDA+YGL+ VS EGRE AWKWL++ W
Sbjct:   738 SQEKTRILGSLASCPDPTIVQDVLNFVLSDEVRNQDALYGLSGVSWEGREVAWKWLQEKW 797

Query:   662 DHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINA 721
             ++I  TWGSGFLITRFIS++VSPFAS+EK +EVEEFF++R KP +ARTL+QSIERV INA
Sbjct:   798 EYIGNTWGSGFLITRFISAVVSPFASFEKAKEVEEFFATRSKPSMARTLKQSIERVHINA 857

Query:   722 KWVESIRNEGHLAEAVKELA 741
              WVESI+ E +L + V +L+
Sbjct:   858 NWVESIKKEDNLTQLVAQLS 877
GO:0004177 "aminopeptidase activity" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009926 "auxin polar transport" evidence=TAS
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010359 "regulation of anion channel activity" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7M0 NPEPPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q974N6APE2_SULTO3, ., 4, ., 1, 1, ., -0.35680.88590.8450yesno
A2RI32AMPN_LACLM3, ., 4, ., 1, 1, ., 20.32090.91810.8085yesno
O93655TRF3_THEAC3, ., 4, ., 1, 1, ., -0.33100.88590.8461yesno
P95928APE2_SULSO3, ., 4, ., 1, 1, ., 10.33380.88450.8394yesno
P37898AAP1_YEAST3, ., 4, ., 1, 1, ., -0.36020.94360.8212yesno
Q10730AMPN_LACHE3, ., 4, ., 1, 1, ., 20.32370.93550.8258yesno
Q9CIQ1AMPN_LACLA3, ., 4, ., 1, 1, ., 20.31060.94630.8333yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.3.2LOW CONFIDENCE prediction!
3rd Layer3.4.110.766
3rd Layer3.3.2.6LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
cd09601446 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f 0.0
COG0308859 COG0308, PepN, Aminopeptidase N [Amino acid transp 1e-143
pfam01433390 pfam01433, Peptidase_M1, Peptidase family M1 1e-132
cd09602438 cd09602, M1_APN_3, Peptidase M1 family containing 2e-88
TIGR02412831 TIGR02412, pepN_strep_liv, aminopeptidase N, Strep 4e-70
cd09595407 cd09595, M1, Peptidase M1 family contains aminopep 4e-67
cd09603415 cd09603, M1_APN_4, Peptidase M1 family Aminopeptid 4e-64
pfam11838323 pfam11838, DUF3358, Domain of unknown function (DU 1e-60
TIGR02414863 TIGR02414, pepN_proteo, aminopeptidase N, Escheric 7e-35
cd09600861 cd09600, M1_APN_1, Peptidase M1 family containing 5e-31
cd09604435 cd09604, M1_APN_5, Peptidase M1 family containing 9e-30
cd09599442 cd09599, M1_LTA4H, Peptidase M1 family contains le 5e-26
TIGR02411602 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola 1e-23
pfam13485128 pfam13485, Peptidase_MA_2, Peptidase MA superfamil 2e-19
PRK14015875 PRK14015, pepN, aminopeptidase N; Provisional 1e-16
cd09839507 cd09839, M1_TAF2, TATA binding protein (TBP) assoc 2e-15
cd09594125 cd09594, GluZincin, Peptidase Gluzincin family (th 4e-05
>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) Back     alignment and domain information 
 Score =  576 bits (1488), Expect = 0.0
 Identities = 200/325 (61%), Positives = 244/325 (75%), Gaps = 4/325 (1%)

Query: 7   QPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESPIM 65
           +P DARR FPC+DEPA KATF IT+  P+   ALSNMPV  E+V     KT  ++ +P M
Sbjct: 122 EPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTPPM 181

Query: 66  STYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYS 125
           STYLVA V+G FDYVE  T +G+ VRVY + GK  QG +AL VA K LE +++YF +PY 
Sbjct: 182 STYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIPYP 241

Query: 126 LPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 185
           LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWFGN
Sbjct: 242 LPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWFGN 301

Query: 186 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIEV 244
           LVTM+WW  LWLNEGFAT++ YL  D L PEW +W QF LD+    L LD LA SHPI V
Sbjct: 302 LVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPISV 361

Query: 245 EVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAA 304
            V    EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A  NA T+DLW A
Sbjct: 362 PVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLWEA 421

Query: 305 LEE--GSGEPVNKLMNSWTKQKGYP 327
           L E    G+ V ++M++WT Q GYP
Sbjct: 422 LSEASKLGKDVKEIMDTWTLQPGYP 446

This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446
>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 Back     alignment and domain information
>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N Back     alignment and domain information
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information
>gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type Back     alignment and domain information
>gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily Back     alignment and domain information
>gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional Back     alignment and domain information
>gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 Back     alignment and domain information
>gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 745
KOG1046882 consensus Puromycin-sensitive aminopeptidase and r 100.0
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 100.0
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 100.0
TIGR02414863 pepN_proteo aminopeptidase N, Escherichia coli typ 100.0
PRK14015875 pepN aminopeptidase N; Provisional 100.0
TIGR02411601 leuko_A4_hydro leukotriene A-4 hydrolase/aminopept 100.0
PF01433390 Peptidase_M1: Peptidase family M1 This is family M 100.0
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 100.0
KOG1047613 consensus Bifunctional leukotriene A4 hydrolase/am 100.0
KOG1932 1180 consensus TATA binding protein associated factor [ 99.97
COG3975558 Predicted protease with the C-terminal PDZ domain 99.49
PF13485128 Peptidase_MA_2: Peptidase MA superfamily 99.16
PF05299122 Peptidase_M61: M61 glycyl aminopeptidase; InterPro 97.83
PF10460366 Peptidase_M30: Peptidase M30; InterPro: IPR019501 97.82
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 96.44
PF11940367 DUF3458: Domain of unknown function (DUF3458); Int 96.44
PF07607128 DUF1570: Protein of unknown function (DUF1570); In 95.91
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 92.95
smart00638574 LPD_N Lipoprotein N-terminal Domain. 92.76
PF10023337 DUF2265: Predicted aminopeptidase (DUF2265); Inter 92.18
PRK04860160 hypothetical protein; Provisional 89.08
COG4324376 Predicted aminopeptidase [General function predict 87.42
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 85.4
smart00731146 SprT SprT homologues. Predicted to have roles in t 85.13
PF01347618 Vitellogenin_N: Lipoprotein amino terminal region; 84.44
PF03272775 Enhancin: Viral enhancin protein; InterPro: IPR004 83.01
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=9.3e-138  Score=1208.00  Aligned_cols=716  Identities=48%  Similarity=0.800  Sum_probs=671.2

Q ss_pred             cCCCcCCCCccccccCCCCCceEEEEEEEeCCCCeEEeCCcccce-eecCCeEEEEEEecCCCCccEEEEEEEcceEEEe
Q 004561            4 FKGQPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVED   82 (745)
Q Consensus         4 ~~~ep~~AR~~fPC~Dep~~ka~f~l~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~   82 (745)
                      -||||++||++|||||||++||+|+|+|.||++++++||||+..+ ..++++++++|++||+||||++||+||+|++++.
T Consensus       157 Tqfept~AR~~FPCfDeP~~KAtF~Itl~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~  236 (882)
T KOG1046|consen  157 TQFEPTDARRAFPCFDEPAFKATFTITLVHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVET  236 (882)
T ss_pred             eccCccchhhcCCCCCcccccCceEEEEEecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeecccccee
Confidence            489999999999999999999999999999999999999999876 4455599999999999999999999999999998


Q ss_pred             eecCCeEEEEEEcCCccchHHHHHHHHHHHHHHHHHHhCCCCCCCccCeeecCCCCCccccccccceeecccccccCCCC
Q 004561           83 HTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHS  162 (745)
Q Consensus        83 ~~~~~~~i~v~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~~yP~~k~d~v~~p~~~~gamEn~gli~~~e~~ll~~~~~~  162 (745)
                      .+.+|+++|+|++|+...+.++|++.+.++|++|+++||+|||+||+|+|++|+|..|||||||||||+|..+|+++..+
T Consensus       237 ~~~~~v~vrv~a~p~~~~~~~~al~~~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~s  316 (882)
T KOG1046|consen  237 ITKSGVPVRVYARPEKINQGQFALEVATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTS  316 (882)
T ss_pred             ecCCCceEEEEeChHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcC
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHhhhCchhHHHHHHHHHHH-HHhhhhccCCCCC
Q 004561          163 AAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHP  241 (745)
Q Consensus       163 ~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~~~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p  241 (745)
                      +..++++++.+||||+|||||||+|||+||+|+|||||||+|+++++++..+|+|..+++++.+.. .++..|+..++||
T Consensus       317 s~~~k~~va~vIaHElAHQWFGNLVTm~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shp  396 (882)
T KOG1046|consen  317 SSSNKQRVAEVIAHELAHQWFGNLVTMKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHP  396 (882)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCcccHhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCC
Confidence            999999999999999999999999999999999999999999999999999999999999888776 5799999999999


Q ss_pred             eeeecCCcchhhcccccccccchhHHHHHHHHhhCHHHHHHHHHHHHHhhccCCCCHHHHHHHHHhhcCCCHHHHHHHhh
Q 004561          242 IEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWT  321 (745)
Q Consensus       242 ~~~~~~~~~~~~~~f~~i~Y~Kga~vl~mL~~~lG~e~F~~~l~~yl~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~W~  321 (745)
                      +..++.++.+|...||.++|.||++|+|||+.++|++.|++||+.||++|+|+|++++|||++|+...+.+++++|+.|+
T Consensus       397 i~~~v~~~~ei~e~fd~i~Y~KGasvlRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt  476 (882)
T KOG1046|consen  397 ISVPVESPSEIDEIFDEISYQKGASVLRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWT  476 (882)
T ss_pred             eeeecCCcchhhhhhhhhhhhHHHHHHHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999888999999999999


Q ss_pred             cCCCcceEEEEEeCCEEEEEEEeecCCCC--CCCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccccCCCCCC
Q 004561          322 KQKGYPVISVKVKEEKLELEQSQFLSSGS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG  399 (745)
Q Consensus       322 ~~~g~P~~~v~~~~~~~~l~Q~rf~~~~~--~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~  399 (745)
                      .|+|||+|+|.+++++++++|+||...+.  ....+|+||++|.+.+.+.....|+..++..+.++.         ++  
T Consensus       477 ~Q~G~Pvv~V~~~~~~~~l~Q~rf~~~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--  545 (882)
T KOG1046|consen  477 KQMGYPVVTVERNGDSLTLTQERFLSDPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--  545 (882)
T ss_pred             cCCCCceEEEEecCCEEEEehhhhccCCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--
Confidence            99999999999999999999999988764  334599999999987665545678888877777753         33  


Q ss_pred             CceEecCCCeeeEEEEcCHHHHHHHHHHHHh-cCCChhhHHHHHHHHHHHHHccCCCHHHHHHHHHhcccCCcHHHHHHH
Q 004561          400 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNL  478 (745)
Q Consensus       400 ~wi~~N~~~~gyyRV~Yd~~~~~~l~~~L~~-~~i~~~~r~~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~~~  478 (745)
                      +||++|.++.|||||+||+++|+.|+.+|.. ..+++.+|++||+|+|+|+++|+++++.+|+++.||.+|++|.||..+
T Consensus       546 ~wi~~N~~~~g~yRV~Yd~~~w~~l~~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~  625 (882)
T KOG1046|consen  546 QWIKVNLEQTGYYRVNYDDENWALLIEQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAA  625 (882)
T ss_pred             eEEEEeCCcceEEEEEeCHHHHHHHHHHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHH
Confidence            6999999999999999999999999999976 789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccChHHHHHHHHHHHHHhHHhhhhcCCccCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 004561          479 ITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL  558 (745)
Q Consensus       479 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~a~~~f~~~~  558 (745)
                      ...|..+.. +..  .+.+..++.|+.+++.+.++++||.....++ ....+|..++..||..|+++|++.|..+|..|+
T Consensus       626 ~~~l~~~~~-~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~  701 (882)
T KOG1046|consen  626 IRSLYKLHS-LED--TEIYSKFKEFVKKLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWL  701 (882)
T ss_pred             HHHHHHHhh-ccc--chHHHHHHHHHHHHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence            999999888 444  5689999999999999999999998755443 778999999999999999999999999999999


Q ss_pred             cCCCCCCCCchhhhHhhhhheeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhc-CcCCcc
Q 004561          559 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQ  637 (745)
Q Consensus       559 ~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~er~~il~aL~cs~d~~ll~~~L~~~l~-~~i~~q  637 (745)
                      ..  ++.+|+++|.+|||+++.   +|+++.|++++++|+++.+..||..++.||+|+++++.++++|++.++ ..++.|
T Consensus       702 ~~--~~~ip~~lr~~vy~~~~~---~g~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~q  776 (882)
T KOG1046|consen  702 AG--TNPIPPDLREVVYCTAVQ---FGTEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQ  776 (882)
T ss_pred             hc--CCCCChhhhhhhhhHHHH---hcCHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccch
Confidence            86  678999999988876655   899999999999999999999999999999999999999999999888 479999


Q ss_pred             cchheee-eccc--cHHHHHHHHHHhHHHHHHHhCCCcchhHHHHHhhccCCCHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 004561          638 DAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSI  714 (745)
Q Consensus       638 d~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~~~l~~ii~~~~~~~~t~~~~~e~~~F~~~~~~~~~~~~~~~~l  714 (745)
                      |...++. ++.+  |.+.+|+|+.+||+.+.+++++.+.+..++..+++.+.+..+++++++||...+..+..+++++++
T Consensus       777 d~~~~~~~~~~~~~g~~~a~~~~~~n~~~l~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l  856 (882)
T KOG1046|consen  777 DVLTLLQGISGNPRGVELAWKFLQDNWKELLNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQAL  856 (882)
T ss_pred             hHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHH
Confidence            9999998 7776  999999999999999999999668899999999999999999999999999987666689999999


Q ss_pred             HHHHHHHHHHHHhcChhHHHHHHHHhh
Q 004561          715 ERVQINAKWVESIRNEGHLAEAVKELA  741 (745)
Q Consensus       715 e~i~~ni~W~~~~~~~~~i~~wl~~~~  741 (745)
                      |.++.|+.|.+++.+.  +.+||.+..
T Consensus       857 e~~~~ni~W~~~~~~~--l~~~l~~~~  881 (882)
T KOG1046|consen  857 ETVKANIQWVERNEEN--LTQWLLEAL  881 (882)
T ss_pred             HHHHhhhhHHHhhHHH--HHHHHHHhc
Confidence            9999999999999888  999998753

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type Back     alignment and domain information
>PRK14015 pepN aminopeptidase N; Provisional Back     alignment and domain information
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] Back     alignment and domain information
>KOG1932 consensus TATA binding protein associated factor [Transcription] Back     alignment and domain information
>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] Back     alignment and domain information
>PF13485 Peptidase_MA_2: Peptidase MA superfamily Back     alignment and domain information
>PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>smart00638 LPD_N Lipoprotein N-terminal Domain Back     alignment and domain information
>PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>COG4324 Predicted aminopeptidase [General function prediction only] Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] Back     alignment and domain information
>PF03272 Enhancin: Viral enhancin protein; InterPro: IPR004954 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
3se6_A967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-107
4e36_A967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-107
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 1e-105
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 1e-105
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-105
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-104
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 1e-103
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 1e-103
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 1e-102
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 1e-102
3q7j_A780 Engineered Thermoplasma Acidophilum F3 Factor Mimic 1e-98
1z1w_A780 Crystal Structures Of The Tricorn Interacting Facor 1e-97
3ebg_A889 Structure Of The M1 Alanylaminopeptidase From Malar 3e-28
3q43_A891 X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin 3e-28
3ebi_A890 Structure Of The M1 Alanylaminopeptidase From Malar 4e-28
3t8v_A895 A Bestatin-Based Chemical Biology Strategy Reveals 9e-28
1hs6_A611 Structure Of Leukotriene A4 Hydrolase Complexed Wit 8e-22
1gw6_A610 Structure Of Leukotriene A4 Hydrolase D375n Mutant 9e-22
1sqm_A610 Structure Of [r563a] Leukotriene A4 Hydrolase Lengt 9e-22
3u9w_A608 Structure Of Human Leukotriene A4 Hydrolase In Comp 9e-22
2r59_A616 Leukotriene A4 Hydrolase Complexed With Inhibitor R 9e-22
3cho_A610 Crystal Structure Of Leukotriene A4 Hydrolase In Co 9e-22
1h19_A611 Structure Of [e271q] Leukotriene A4 Hydrolase Lengt 2e-21
3b7s_A616 [e296q]lta4h In Complex With Rsr Substrate Length = 2e-21
3puu_A891 Crystal Structure Of Glu121gln Mutant Of E. Coli Am 3e-21
2hpo_A891 Structure Of Aminopeptidase N From E. Coli Suggests 3e-21
2dq6_A870 Crystal Structure Of Aminopeptidase N From Escheric 3e-21
2xq0_A632 Structure Of Yeast Lta4 Hydrolase In Complex With B 4e-18
2xpy_A632 Structure Of Native Leukotriene A4 Hydrolase From S 7e-18
3cia_A605 Crystal Structure Of Cold-Aminopeptidase From Colwe 2e-16
2gtq_A867 Crystal Structure Of Aminopeptidase N From Human Pa 4e-16
3rjo_A419 Crystal Structure Of Erap1 Peptide Binding Domain L 7e-16
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure 
Iteration: 1

 Score =  387 bits (993), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 244/767 (31%), Positives = 387/767 (50%), Gaps = 68/767 (8%)
Query: 7   QPPDARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIM 65
           +P  AR  FPC+DEP  KA F I +   S  +ALSNMP +   +++G +    ++ +  M
Sbjct: 200 EPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKM 259
Query: 66  STYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYS 125
           STYLVA ++  F  +   TS G+KV +Y    K NQ  +AL  ++K L+ Y++YF + Y 
Sbjct: 260 STYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYP 319
Query: 126 LPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 185
           L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K  V  V+AHELAHQWFGN
Sbjct: 320 LSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGN 379
Query: 186 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVE 245
           LVTMEWW  +WLNEGFA ++  +A ++ +PE +    FL+ C E +  D L  S PI   
Sbjct: 380 LVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKP 439
Query: 246 VNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAAL 305
                +I E+FD +SY KGA ++ ML+++LG E FQ+ +  Y+KK++  NAK +DLW++L
Sbjct: 440 AETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSL 499
Query: 306 EE---------------------------GSGEPVNKLMNSWTKQKGYPVIXXXXXXXXX 338
                                        G    V ++M +WT QKG P++         
Sbjct: 500 SNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQDGCSL 559
Query: 339 XXXXXXXXXXGSPGDGQ---------WIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLG 389
                         D +         W +P+T    S +V    +L +K+D+ D+ E   
Sbjct: 560 RLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE--- 616
Query: 390 CSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQ--LSETDRFGILDDHFA 447
                      W+K NV+  G+Y V Y+     +L   +      L   DR G++ D F 
Sbjct: 617 --------KTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQ 668
Query: 448 LCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDY---LKQFF 504
           L  A + TL   L +      ET    L  L  +SY         R  + D    LK++ 
Sbjct: 669 LVGAGRLTLDKALDMTYYLQHETSSPAL--LEGLSYLESFYHMMDRRNISDISENLKRYL 726
Query: 505 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTP 564
           +  F+   ++  W  K   S  D +LR  +      L H   + +A++ F  ++      
Sbjct: 727 LQYFKPVIDRQSWSDK--GSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKL 784
Query: 565 LLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLE 624
            +P D+ K  Y      V A   +G+  LL  Y  +  S E+ +IL +L++      +L+
Sbjct: 785 NIPTDVLKIVY-----SVGAQTTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLK 839
Query: 625 VLNFLLSSEV-RSQD---AVYGLAVSIEGRETAWKWLKDNWDHISKTWGSG-FLITRFIS 679
           ++   +  +V ++Q+    ++ +A   +G++ AW ++++NW H+ K +  G + I   IS
Sbjct: 840 LIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIIS 899
Query: 680 SIVSPFASYEKVREVEEFFSS-RCKPYIARTLRQSIERVQINAKWVE 725
              + F+S +K++EV+ FF S   +       +  +E +  N KW+E
Sbjct: 900 GTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLE 946
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 Back     alignment and structure
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 Back     alignment and structure
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 Back     alignment and structure
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 Back     alignment and structure
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 Back     alignment and structure
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 Back     alignment and structure
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 Back     alignment and structure
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 Back     alignment and structure
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 Back     alignment and structure
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 Back     alignment and structure
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 Back     alignment and structure
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 Back     alignment and structure
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 Back     alignment and structure
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 Back     alignment and structure
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 Back     alignment and structure
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 Back     alignment and structure
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 Back     alignment and structure
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 Back     alignment and structure
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 Back     alignment and structure
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 Back     alignment and structure
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 0.0
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 0.0
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 0.0
3b7s_A616 Leukotriene A-4 hydrolase; transition state, analo 1e-149
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 1e-148
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 1e-144
3ebh_A889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 1e-141
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 1e-129
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 1e-125
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 1e-111
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
4fgm_A597 Aminopeptidase N family protein; structural genomi 5e-07
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 745
d3b7sa3252 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat 2e-48
d3b7sa2208 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term 7e-18
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 2e-48
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 19/255 (7%)

Query: 87  GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENY 145
           G +  V+ +  +  +  +  +     L++ ++    PY   + D++ + P F  G MEN 
Sbjct: 7   GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENP 65

Query: 146 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWV 205
            L     T L         A  + ++ V+AH+++H W GNLVT + W H WLNEG   ++
Sbjct: 66  CLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYL 116

Query: 206 SYLAADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVNHTGEID--EIFDAISYR 262
                  LF E       L    E    +    E+HP    V    +ID    + ++ Y 
Sbjct: 117 ERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYE 176

Query: 263 KGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 317
           KG +++  L+  LG  E F   L +Y++K++  +  T+D    L     + V+ L     
Sbjct: 177 KGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236

Query: 318 NSWTKQKGYPVISVK 332
           N+W    G P I   
Sbjct: 237 NAWLYSPGLPPIKPN 251
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query745
d3b7sa3252 Leukotriene A4 hydrolase catalytic domain {Human ( 100.0
d3b7sa2208 Leukotriene A4 hydrolase N-terminal domain {Human 99.78
d1lsha1336 Lipovitellin-phosvitin complex, superhelical domai 90.48
d1kjpa_316 Thermolysin {Bacillus thermoproteolyticus [TaxId: 84.58
d1bqba_301 Aureolysin {Staphylococcus aureus [TaxId: 1280]} 82.88
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=365.99  Aligned_cols=237  Identities=27%  Similarity=0.452  Sum_probs=204.9

Q ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC-CCCCCCCCCCCCCCEEECCCCCCCCCCCCH
Q ss_conf             9837999971884003999999999999999998289999976671443-899985212355201103521336888818
Q 004561           86 DGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAA  164 (745)
Q Consensus        86 ~g~~i~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~yP~~k~~~v~~-P~~~~g~me~~gli~~~e~~ll~~~~~~~~  164 (745)
                      .|++|+||++|+..+.++++++.+++++++|+++|| |||++|+|+|++ |++..|||||||++++++..++.+..    
T Consensus         6 ~g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~----   80 (252)
T d3b7sa3           6 IGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----   80 (252)
T ss_dssp             EETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST----
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHCCEEEECCCCCCCCCCCCEEEEECCHHCCCCCH----
T ss_conf             688369997534688999999999999999999679-998332688996788655340132046310000146510----


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHHCCCCCCCEE
Q ss_conf             8899999999999999874064135655245897879999999998521811378999999989-885210238999836
Q 004561          165 ANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIE  243 (745)
Q Consensus       165 ~~~~~~~~~iaHEiaHqWfG~~vt~~~w~~~Wl~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~  243 (745)
                           +..+++||+|||||||+||++||+++||+||||+|++.+++++.+|+............ .....|+....+|+.
T Consensus        81 -----~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (252)
T d3b7sa3          81 -----LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFT  155 (252)
T ss_dssp             -----TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGG
T ss_pred             -----HHHHHHHHHHHHHHHHHCEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             -----999999999999986122001214147642188999987640023202222233312466777876421137753


Q ss_pred             EECCCCC--HHHCCCCCCCCCCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH----
Q ss_conf             5249920--12001552232332089999998548-9999999999998613699997899999996119978999----
Q 004561          244 VEVNHTG--EIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----  316 (745)
Q Consensus       244 ~~~~~~~--~~~~~f~~i~Y~Kg~~vl~mL~~~iG-~e~F~~~l~~yl~~~~~~~~~~~dl~~~l~~~~~~~~~~~----  316 (745)
                      .++....  +.+..|+.++|.||++||+||+..|| ++.|+++||.|+++|+++++++.||+++++++++.+++.+    
T Consensus       156 ~~~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~  235 (252)
T d3b7sa3         156 KLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVD  235 (252)
T ss_dssp             SSSCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSC
T ss_pred             EEECCCCCCCHHHCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             23203444335542552253024589999999864389999999999998287999999999999998540423466759


Q ss_pred             HHHHHCCCCCCEEEEE
Q ss_conf             9884338895349999
Q 004561          317 MNSWTKQKGYPVISVK  332 (745)
Q Consensus       317 ~~~W~~q~G~P~i~v~  332 (745)
                      |++|++|+|||+++|+
T Consensus       236 f~~W~~~~G~P~l~v~  251 (252)
T d3b7sa3         236 WNAWLYSPGLPPIKPN  251 (252)
T ss_dssp             HHHHHHCCSSCSSCCC
T ss_pred             HHHHHCCCCCCEEECC
T ss_conf             9998668998725425
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} Back     information, alignment and structure
>d1kjpa_ d.92.1.2 (A:) Thermolysin {Bacillus thermoproteolyticus [TaxId: 1427]} Back     information, alignment and structure
>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure