Citrus Sinensis ID: 004590

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740---
MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAILKGRPSIETV
cccccccccHHHHcccccccEEEEEEEccEEEEcccccccccccccEEEEEEEEEccccccEEEEEEEEccccccccccHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHccccEEEccccccccccccccccccEEEEEEcccEEEEEEEEcccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccHHHHHHHccccccccccccccccccccccccEEEEEcccccEEEEEcccccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccEEcccEEEEEEEccccccccccccccEEEcccEEEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHcccEEEEEccccccccccEEcccccccccccccEEEEEEEcccccccEEEEEcccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEcccccccHHHHHHccccccccccccccccccccEEEEEEEccccEEEEEEccccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccEEEccccccccccccccHHHHHHHcccccccccc
ccccHHHccHHHHHcccccEEEEEEEccccEEEccHHHccEEEcccEEEEEEEEEcccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHccccccEEcccccccccccccccccccEEEEEEcccccEEEEEcccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHcHHHccEEEEEEcccccccccHHHHHHHHcccccccccccccHHHHHccccEEEEEEcccccEEEEEcccccHHHHccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHcccccccccccccccccEEEEEEEccccHHHHHHHcccccccccccEEEEEEEccccccccHHHccccccccEEEEEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHccEEEEEcccccccccEEcccccccccccccccEEEEEEccccccEEEEEEcccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccccEEcccccHHHHHcccccccccccccccccHHHHcEEEEEccccEEEEEEEccccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccccHcccccccHHHHHHHHccccccccc
MSLHSKDIDSAFEGAGKKLGLEIWCIEnlqlvsvpksshgkfytgsAYVILNTAllksgppqhdihywlgndvneedstlvsDKALELDAALGSCTVQYREVQGQETEKFLSyfrpciipldgkyslrsgksngetyKISMLtckgdhvvrvkevpfsrsslnhndvfivDTASKIFLFSGCNSSIQERAKALEVVQYIKedkhggkcgvatvedgkfvgdsdvgefwslfggyapiprdspsafqqqpdtpsttFFWINLQGKLCQIAANSLNKdmlekdkcymldcVNEVFVWTGRNTSITERRISISASEDFLrnqgrttgthLTFLTEGLETTVFRsyfdswpqiaepklydEGREKVAAIFKQQghdvkelpeedfepyvncRGILKVWRvngdelsllpAAEQmklfsgdcyivkytypgngrdenVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEegivdetydEKKMALFCIqgtspcnmqafqvdrvstclnssycyilQNGASVFTWIgnlsssrdHDLLDRMVELinptwqpisvregsepevfwnalggkseyprekeikgfiedphlftctltegdlKVKEIYNftqddlttediLVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILveglsletpiyvvtegheppfftcffawdplkakmhgNSFERKLAIlkgrpsietv
MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVpfsrsslnhndVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATvedgkfvgdSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVwtgrntsiterrisisasedflrnqgrttgthltfltEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQghdvkelpeedfepyvNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTwqpisvregsePEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFtqddlttedILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERklailkgrpsietv
MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAILKGRPSIETV
**************AGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPI****************TTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAI**********
************EGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTV*************LSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAP*******AFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLY************QQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLST************DETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAK**********************
MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDS*********TPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAILKGRPSIETV
*****KDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYD*GREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAILKGRP*****
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MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNSFERKLAILKGRPSIETV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query743 2.2.26 [Sep-21-2011]
O81643 909 Villin-1 OS=Arabidopsis t yes no 0.993 0.811 0.644 0.0
O65570 974 Villin-4 OS=Arabidopsis t no no 0.986 0.752 0.512 0.0
O81644 976 Villin-2 OS=Arabidopsis t no no 0.985 0.75 0.445 0.0
O81645 965 Villin-3 OS=Arabidopsis t no no 0.987 0.760 0.444 0.0
Q27319754 Gelsolin, cytoplasmic OS= N/A no 0.928 0.915 0.305 4e-95
O75366819 Advillin OS=Homo sapiens yes no 0.927 0.841 0.306 4e-92
P20305772 Gelsolin (Fragment) OS=Su no no 0.896 0.862 0.296 1e-89
O93510778 Gelsolin OS=Gallus gallus no no 0.901 0.861 0.298 8e-89
Q3SX14731 Gelsolin OS=Bos taurus GN no no 0.896 0.911 0.293 1e-88
Q28372731 Gelsolin OS=Equus caballu no no 0.904 0.919 0.294 1e-88
>sp|O81643|VILI1_ARATH Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2 Back     alignment and function desciption
 Score = 1017 bits (2629), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/740 (64%), Positives = 594/740 (80%), Gaps = 2/740 (0%)

Query: 1   MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGP 60
           MS  SKDIDSAF+G G K GLEIWC+ N QL+S+PKSS GKF++G+AY++L T L K   
Sbjct: 1   MSRLSKDIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIES 60

Query: 61  PQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIP 120
           PQ+DIHYWLG D NE DS L SDKAL+LDAALG CTVQYREVQGQETEKFLSYF+PCIIP
Sbjct: 61  PQYDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQGQETEKFLSYFKPCIIP 120

Query: 121 LDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFS 180
           ++GKYS ++G + GETY++++L CKGDHVVRVKEVPF RSSLNH+DVFI+DTASK+FLF+
Sbjct: 121 VEGKYSPKTGIA-GETYQVTLLRCKGDHVVRVKEVPFLRSSLNHDDVFILDTASKVFLFA 179

Query: 181 GCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRD 240
           GCNSS QE+AKA+EVV+YIK++KH G+C VAT+EDGKF GDSD GEFWS FGGYAPIP+ 
Sbjct: 180 GCNSSTQEKAKAMEVVEYIKDNKHDGRCEVATIEDGKFSGDSDAGEFWSFFGGYAPIPKL 239

Query: 241 SPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNT 300
           S S  Q+Q  TP    FWI+ +G L     +SL+KDMLEK+KCYMLDC +EVFVW GRNT
Sbjct: 240 SSSTTQEQTQTPCAELFWIDTKGNLHPTGTSSLDKDMLEKNKCYMLDCHSEVFVWMGRNT 299

Query: 301 SITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGRE 360
           S+TER+ SIS+SE+FLR +GR+T T L  LTEGLE   FRS+F+ WPQ  E  LY+EGRE
Sbjct: 300 SLTERKTSISSSEEFLRKEGRSTTTSLVLLTEGLENARFRSFFNKWPQTVESSLYNEGRE 359

Query: 361 KVAAIFKQQGHDVKELPEEDFEP-YVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYI 419
           KVAA+FKQ+G+DV+ELP+E+ +P Y NCR  LKVWRV+GD++SLL   +Q KLF+GDCY+
Sbjct: 360 KVAALFKQKGYDVEELPDEEDDPLYTNCRDNLKVWRVDGDDVSLLSIPDQTKLFTGDCYL 419

Query: 420 VKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQF 479
           V+Y Y    R E+++Y W G ES+ +DRA AI++ SAIV +T+GE+V+  ++Q  EP +F
Sbjct: 420 VQYKYTYKERTEHLLYVWIGCESIQQDRADAITNASAIVGTTKGESVLCHIYQGNEPSRF 479

Query: 480 FLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVST 539
           F +FQSL+VFKGGLS +YK  + E+  + E Y+E K +LF + GTSP NMQA QV+ V+T
Sbjct: 480 FPMFQSLVVFKGGLSRRYKVLLAEKEKIGEEYNENKASLFRVVGTSPRNMQAIQVNLVAT 539

Query: 540 CLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNA 599
            LNSSY YILQ GAS FTWIG LSS  DH++LDRM+  ++ + QPI +REG+E + FWN 
Sbjct: 540 SLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTFWNL 599

Query: 600 LGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIY 659
           LGGKSEYP+EKE++  IE+PHLFTC+ +   LKVKEIYNF QDDLTTED+ +LDC  E+Y
Sbjct: 600 LGGKSEYPKEKEMRKQIEEPHLFTCSCSSDVLKVKEIYNFVQDDLTTEDVFLLDCQSEVY 659

Query: 660 VWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLK 719
           VWIG +S++ SK++AL +G KFLE DIL EGL++ TP+YVVTEGHEPPFFT FF W P K
Sbjct: 660 VWIGSNSNIKSKEEALTLGLKFLEMDILEEGLTMRTPVYVVTEGHEPPFFTRFFEWVPEK 719

Query: 720 AKMHGNSFERKLAILKGRPS 739
           A MHGNSFERKLA LKG+ +
Sbjct: 720 ANMHGNSFERKLASLKGKKT 739
Ca(2+)-regulated actin-binding protein.
Arabidopsis thaliana (taxid: 3702)
>sp|O65570|VILI4_ARATH Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1 Back     alignment and function description
>sp|O81644|VILI2_ARATH Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2 Back     alignment and function description
>sp|O81645|VILI3_ARATH Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=2 Back     alignment and function description
>sp|Q27319|GELS_HOMAM Gelsolin, cytoplasmic OS=Homarus americanus PE=1 SV=1 Back     alignment and function description
>sp|O75366|AVIL_HUMAN Advillin OS=Homo sapiens GN=AVIL PE=1 SV=3 Back     alignment and function description
>sp|P20305|GELS_PIG Gelsolin (Fragment) OS=Sus scrofa GN=GSN PE=1 SV=1 Back     alignment and function description
>sp|O93510|GELS_CHICK Gelsolin OS=Gallus gallus GN=GSN PE=2 SV=1 Back     alignment and function description
>sp|Q3SX14|GELS_BOVIN Gelsolin OS=Bos taurus GN=GSN PE=2 SV=1 Back     alignment and function description
>sp|Q28372|GELS_HORSE Gelsolin OS=Equus caballus GN=GSN PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query743
359478551 902 PREDICTED: villin-1-like [Vitis vinifera 0.982 0.809 0.747 0.0
297745909 908 unnamed protein product [Vitis vinifera] 0.982 0.803 0.747 0.0
224106269 902 predicted protein [Populus trichocarpa] 0.985 0.811 0.730 0.0
255569327 903 villin 1-4, putative [Ricinus communis] 0.990 0.815 0.726 0.0
356527236 905 PREDICTED: villin-1-like isoform 2 [Glyc 0.989 0.812 0.691 0.0
356527234 913 PREDICTED: villin-1-like isoform 1 [Glyc 0.989 0.805 0.685 0.0
356569564 972 PREDICTED: villin-1-like [Glycine max] 0.963 0.736 0.705 0.0
449450930 904 PREDICTED: villin-1-like [Cucumis sativu 0.989 0.813 0.691 0.0
334184569 933 villin-1 [Arabidopsis thaliana] gi|33025 0.993 0.790 0.644 0.0
18402176 909 villin-1 [Arabidopsis thaliana] gi|14774 0.993 0.811 0.644 0.0
>gi|359478551|ref|XP_002279254.2| PREDICTED: villin-1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1172 bits (3031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/730 (74%), Positives = 628/730 (86%)

Query: 7   DIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIH 66
           +ID  F+GAG K GLEIWCIENL+LV VPKSS+GKF++GSAY+ILNT LLKS  PQHDIH
Sbjct: 2   EIDPIFQGAGVKAGLEIWCIENLRLVLVPKSSYGKFFSGSAYIILNTVLLKSSSPQHDIH 61

Query: 67  YWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYS 126
           YWLGND  E DS L SDKALELDAALGS  VQ+RE+QG ETEKFLSYF+PCIIP++G +S
Sbjct: 62  YWLGNDAKEVDSALASDKALELDAALGSQAVQFREIQGLETEKFLSYFKPCIIPIEGVFS 121

Query: 127 LRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSI 186
              G+ N ETY+IS+ TCKGDHVV +KEVPFSRSSLNHNDVFI+DTASKIFLFSGCNSSI
Sbjct: 122 SGPGELNCETYQISLFTCKGDHVVHIKEVPFSRSSLNHNDVFILDTASKIFLFSGCNSSI 181

Query: 187 QERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQ 246
           QERAKALEVVQYIKE+KH GKC VAT+EDGKFVGD DVGEFW LFGGYAPIPRD P + Q
Sbjct: 182 QERAKALEVVQYIKENKHNGKCEVATIEDGKFVGDPDVGEFWGLFGGYAPIPRDIPPSLQ 241

Query: 247 QQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNTSITERR 306
           +QPD P+   FWI  QGKLCQ   N LNK+MLE +KCYMLDC NE+FVW GRNTSITER+
Sbjct: 242 KQPDIPNAKLFWIATQGKLCQTVCNMLNKEMLESNKCYMLDCDNEIFVWMGRNTSITERK 301

Query: 307 ISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIF 366
            SISA+EDFL++QGR+T +HLT LTEG ET +FRSYFD WPQ+AEP+LY+EGR KVAA+F
Sbjct: 302 TSISAAEDFLKSQGRSTRSHLTSLTEGSETAIFRSYFDVWPQLAEPRLYEEGRGKVAAMF 361

Query: 367 KQQGHDVKELPEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPG 426
           KQQG+DVKELPEED +  ++C G LKVWRVN DEL L+P AEQ KLFSGDCYIV+Y YPG
Sbjct: 362 KQQGYDVKELPEEDCDSLIDCSGTLKVWRVNDDELFLVPVAEQTKLFSGDCYIVQYKYPG 421

Query: 427 NGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDMEPVQFFLIFQSL 486
           NGRDE + YAW G  ++ EDR  AIS M+ IVDS +G++V+ QV ++ EP++FFLIFQ+L
Sbjct: 422 NGRDEYLFYAWLGRGAVMEDRVDAISRMNTIVDSMKGDSVVGQVIEEKEPIEFFLIFQTL 481

Query: 487 IVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYC 546
           IVFKGGLST+YK+FI E+GI DETYDEKK ALF +QGTSP NMQA QVD+VS+ LNSSYC
Sbjct: 482 IVFKGGLSTRYKRFIAEKGIADETYDEKKTALFRVQGTSPNNMQAIQVDQVSSSLNSSYC 541

Query: 547 YILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEY 606
           +ILQ   S+FTW+GNLSS+RDHDLLDRM++LINPT QPISVREGSEP+VFW ALGGK+E+
Sbjct: 542 FILQTETSIFTWVGNLSSTRDHDLLDRMLDLINPTLQPISVREGSEPDVFWKALGGKAEH 601

Query: 607 PREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHS 666
           PRE+EIK ++EDPHLFTCT T+GDLKVKEI+NFTQDDLTTED L+LDC REIYVW GCHS
Sbjct: 602 PREREIKAYVEDPHLFTCTFTDGDLKVKEIFNFTQDDLTTEDKLILDCNREIYVWCGCHS 661

Query: 667 DLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFTCFFAWDPLKAKMHGNS 726
           ++ SK+QAL IG KFLE DILVEGLSLETPIYVVTEGHEP FFT FF WD  KA MHG+S
Sbjct: 662 NVRSKKQALEIGLKFLEIDILVEGLSLETPIYVVTEGHEPTFFTRFFEWDSSKANMHGSS 721

Query: 727 FERKLAILKG 736
           FER+LAILKG
Sbjct: 722 FERRLAILKG 731

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297745909|emb|CBI15965.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224106269|ref|XP_002314108.1| predicted protein [Populus trichocarpa] gi|222850516|gb|EEE88063.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255569327|ref|XP_002525631.1| villin 1-4, putative [Ricinus communis] gi|223535067|gb|EEF36749.1| villin 1-4, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356527236|ref|XP_003532218.1| PREDICTED: villin-1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356527234|ref|XP_003532217.1| PREDICTED: villin-1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356569564|ref|XP_003552969.1| PREDICTED: villin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|449450930|ref|XP_004143215.1| PREDICTED: villin-1-like [Cucumis sativus] gi|449526423|ref|XP_004170213.1| PREDICTED: villin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|334184569|ref|NP_001189635.1| villin-1 [Arabidopsis thaliana] gi|330253223|gb|AEC08317.1| villin-1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18402176|ref|NP_029567.1| villin-1 [Arabidopsis thaliana] gi|147744599|sp|O81643.2|VILI1_ARATH RecName: Full=Villin-1 gi|20198093|gb|AAD23629.2| putative villin [Arabidopsis thaliana] gi|330253221|gb|AEC08315.1| villin-1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query743
TAIR|locus:2165570 962 VLN5 "villin 5" [Arabidopsis t 0.990 0.765 0.511 1.2e-207
TAIR|locus:2082523 965 VLN3 "villin 3" [Arabidopsis t 0.987 0.760 0.443 6.9e-173
TAIR|locus:2054401 976 VLN2 "villin 2" [Arabidopsis t 0.985 0.75 0.445 1.1e-172
UNIPROTKB|F1MMN9816 AVIL "Uncharacterized protein" 0.938 0.854 0.322 6.1e-95
UNIPROTKB|F1PBL8816 AVIL "Uncharacterized protein" 0.939 0.855 0.316 3.9e-92
UNIPROTKB|I3LI80819 AVIL "Uncharacterized protein" 0.939 0.852 0.312 2.1e-91
UNIPROTKB|O75366819 AVIL "Advillin" [Homo sapiens 0.924 0.838 0.311 3.1e-90
ZFIN|ZDB-GENE-030131-8567728 gsnb "gelsolin b" [Danio rerio 0.919 0.938 0.305 6.7e-88
UNIPROTKB|E1C5U6 865 VILL "Uncharacterized protein" 0.936 0.804 0.307 8.6e-88
MGI|MGI:1333798819 Avil "advillin" [Mus musculus 0.939 0.852 0.304 1.1e-87
TAIR|locus:2165570 VLN5 "villin 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2008 (711.9 bits), Expect = 1.2e-207, P = 1.2e-207
 Identities = 385/753 (51%), Positives = 526/753 (69%)

Query:     1 MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGP 60
             M+   +D+D A +GAG+K G+EIW IEN + V+VP+ SHGKF+TG +Y++L T   +SG 
Sbjct:     1 MTFSMRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGS 60

Query:    61 PQHDIHYWLGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIP 120
               HDIHYWLG D +++++  V+   +ELD+ALG   VQYREVQG ETEKFLSYF+PCIIP
Sbjct:    61 LHHDIHYWLGKDSSQDEAGAVAVMTVELDSALGGRAVQYREVQGHETEKFLSYFKPCIIP 120

Query:   121 LDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFS 180
              +G  +        E ++  +  CKG HVVRVKEVPF RS+LNH DVFI+DT SKIF FS
Sbjct:   121 QEGGVASGFNHVKPEEHQTRLYICKGKHVVRVKEVPFVRSTLNHEDVFILDTESKIFQFS 180

Query:   181 GCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRD 240
             G  SSIQERAKALEVVQYIK+  H GKC +A VEDG+ + D++ GEFW LFGG+AP+P+ 
Sbjct:   181 GSKSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRMMADAEAGEFWGLFGGFAPLPKK 240

Query:   241 SPSAFQQQPDTPSTTFFWINLQGKLCQIAANSLNKDMLEKDKCYMLDCVNEVFVWTGRNT 300
                   +   +     F +  +G+   + A  L K++L+ +KCY+LDC  E+FVW GR+T
Sbjct:   241 PAVNDDETAASDGIKLFSVE-KGQTDAVEAECLTKELLDTNKCYILDCGLELFVWKGRST 299

Query:   301 SITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQ---IAEPKLYDE 357
             SI +R+ +  A+E+F R+      ++L  + EG ET +FRS FDSWP    IAEP+   +
Sbjct:   300 SIDQRKSATEAAEEFFRSS-EPPKSNLVSVMEGYETVMFRSKFDSWPASSTIAEPQ---Q 355

Query:   358 GREKVAAIFKQQGHDVKEL-------PEEDFEPYVNCRGILKVWRVNGDELSLLPAAEQM 410
             GR KVAA+ ++QG +V+ L        +++ +PY++  G L+VWR+N +E  LL AAEQ 
Sbjct:   356 GRGKVAALLQRQGVNVQGLVKTSSSSSKDEPKPYIDGTGNLQVWRINCEEKILLEAAEQS 415

Query:   411 KLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQV 470
             K +SGDCYI++Y+YPG  R+E+++  WFG +S+ EDRA+AIS  + +V+S +     A++
Sbjct:   416 KFYSGDCYILQYSYPGEDREEHLVGTWFGKQSVEEDRASAISLANKMVESMKFVPAQARI 475

Query:   471 HQDMEPVQFFLIFQSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQ 530
             ++  EP+QFF+I QS I FKGG+S  +KK+I E  I D TY+ + +ALF +QG+ P NMQ
Sbjct:   476 NEGKEPIQFFVIMQSFITFKGGVSDAFKKYIAENDIPDTTYEAEGVALFRVQGSGPENMQ 535

Query:   531 AFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREG 590
             A Q++  S  LNSS+CYIL   ++VFTW GNL+SS D +L++RM++LI P     + +EG
Sbjct:   536 AIQIEAASAGLNSSHCYILHGDSTVFTWCGNLTSSEDQELMERMLDLIKPNEPTKAQKEG 595

Query:   591 SEPEVFWNALGGKSEYPREKEIKGFIEDPHLFTCTLTEGDLKVKEIYNFTQDDLTTEDIL 650
             SE E FW  LGGKSEYP +K  +    DPHLF+CT T   LK  EI+NFTQDDL TEDI 
Sbjct:   596 SESEQFWELLGGKSEYPSQKIKRDGESDPHLFSCTYTNESLKATEIFNFTQDDLMTEDIF 655

Query:   651 VLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPFFT 710
             +LDC  E++VW+G   D   K QAL+IG+ FL+ D L+E L+ ETPIY+VTEG+EPPFFT
Sbjct:   656 ILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLENLASETPIYIVTEGNEPPFFT 715

Query:   711 CFFAWDPLKAKMHGNSFERKLAIL--KGRPSIE 741
              FF WD  K+ MHG+SF+RKLAIL  KG+P ++
Sbjct:   716 RFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLD 748
GO:0003779 "actin binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0007010 "cytoskeleton organization" evidence=IEA;ISS
TAIR|locus:2082523 VLN3 "villin 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054401 VLN2 "villin 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMN9 AVIL "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBL8 AVIL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LI80 AVIL "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O75366 AVIL "Advillin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-8567 gsnb "gelsolin b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C5U6 VILL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1333798 Avil "advillin" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O75366AVIL_HUMANNo assigned EC number0.30600.92730.8412yesno
O81643VILI1_ARATHNo assigned EC number0.64450.99320.8118yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
cd11290113 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-l 4e-51
cd11293101 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-l 3e-36
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 1e-35
cd1128892 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l 1e-28
cd1128992 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-l 5e-27
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 5e-25
smart0026290 smart00262, GEL, Gelsolin homology domain 6e-23
cd11293101 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-l 1e-16
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 7e-16
smart0026290 smart00262, GEL, Gelsolin homology domain 3e-14
smart0026290 smart00262, GEL, Gelsolin homology domain 1e-13
smart0026290 smart00262, GEL, Gelsolin homology domain 1e-13
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 1e-10
smart0026290 smart00262, GEL, Gelsolin homology domain 7e-10
cd1128892 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l 1e-09
smart0026290 smart00262, GEL, Gelsolin homology domain 2e-09
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 7e-09
cd11290113 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-l 2e-08
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 3e-08
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 3e-07
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 5e-07
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 9e-07
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 1e-06
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 1e-06
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 2e-05
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 4e-05
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 0.003
>gnl|CDD|200446 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information 
 Score =  173 bits (440), Expect = 4e-51
 Identities = 59/112 (52%), Positives = 82/112 (73%)

Query: 12  FEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGN 71
           FEG G+K GL+IW IEN +LV VP+S +GKFY G +Y++L T L  SG   +DIHYWLG 
Sbjct: 1   FEGVGQKPGLQIWRIENFELVPVPESFYGKFYEGDSYIVLKTTLDPSGSLSYDIHYWLGK 60

Query: 72  DVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDG 123
           + +++++   + KA+ELD  LG   VQ+REVQG E+E+FLSYF+  II ++G
Sbjct: 61  EASQDEAGAAAIKAVELDDYLGGRPVQHREVQGHESEEFLSYFKKGIIYIEG 112

Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin_like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins. Length = 113
>gnl|CDD|200449 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200445 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|200449 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200446 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 743
KOG0443827 consensus Actin regulatory proteins (gelsolin/vill 100.0
KOG04441255 consensus Cytoskeletal regulator Flightless-I (con 100.0
KOG0445919 consensus Actin regulatory protein supervillin (ge 100.0
KOG0443827 consensus Actin regulatory proteins (gelsolin/vill 100.0
KOG0444 1255 consensus Cytoskeletal regulator Flightless-I (con 100.0
KOG0445919 consensus Actin regulatory protein supervillin (ge 100.0
smart0026290 GEL Gelsolin homology domain. Gelsolin/severin/vil 99.69
smart0026290 GEL Gelsolin homology domain. Gelsolin/severin/vil 99.66
PF0062676 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gel 99.39
PF0062676 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gel 99.38
PTZ003951560 Sec24-related protein; Provisional 94.91
KOG19841007 consensus Vesicle coat complex COPII, subunit SFB3 94.13
PTZ003951560 Sec24-related protein; Provisional 93.91
COG5028861 Vesicle coat complex COPII, subunit SEC24/subunit 93.65
COG5028861 Vesicle coat complex COPII, subunit SEC24/subunit 93.23
KOG19841007 consensus Vesicle coat complex COPII, subunit SFB3 92.23
KOG1985887 consensus Vesicle coat complex COPII, subunit SEC2 89.04
KOG1985887 consensus Vesicle coat complex COPII, subunit SEC2 81.74
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-177  Score=1456.79  Aligned_cols=718  Identities=48%  Similarity=0.861  Sum_probs=666.8

Q ss_pred             CCCCcccCCchhccCCccccEEEEEEECCEEeecCCCCCCccccCCeEEEEeeeecCCCCCceeEEEEccCCCChhhHHH
Q 004590            1 MSLHSKDIDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTL   80 (743)
Q Consensus         1 ~~~~~~~~~~~~~~~g~~~~~~vWrIe~~~~~~v~~~~~G~Fy~gd~YIvl~t~~~~~~~~~~~i~~W~G~~ss~de~g~   80 (743)
                      |++.|.++|++|+++|+++|++|||||+|.+++||++.||+||+|||||||+|...+++.+.|+||||+|+++|+||+|+
T Consensus         1 ~s~~~~~ld~af~~ag~~pGl~IWRIe~f~lv~VP~s~~G~Fy~GdaYIvL~t~~~k~~~l~~DIHyWLGkd~S~dE~g~   80 (827)
T KOG0443|consen    1 MSMSMLDLDPAFQGAGQKPGLEIWRIENFELVPVPKSSHGKFYTGDAYIVLKTTLKKNGSLSYDIHYWLGKDSSQDEAGA   80 (827)
T ss_pred             CCccccccCHHHHhcccCCceEEEEeccCeeeecchhccCceecCceEEEEehhhccCCccceeEEEEecCccchhhhcc
Confidence            88999999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEeecCCCChHHHhccCCcEEEccCcccCCCCCCCCcccceEEEEeeCCceEEEEEeccccC
Q 004590           81 VSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGKSNGETYKISMLTCKGDHVVRVKEVPFSRS  160 (743)
Q Consensus        81 aa~~a~eLd~~l~g~~vq~Re~Qg~Es~~Fl~~F~~~ii~~~Gg~~s~f~~~~~~~~~~rL~~vkG~~~v~~~eV~~s~s  160 (743)
                      ||++|+|||+.|||.||||||+||+||+.||+|||++|||.+||++|||+||+...+.+|||||||+|++|+.|||++|+
T Consensus        81 aAiktveLD~~Lgg~~vQhREVQg~ES~~FLsYFK~gi~~~~GGv~Sg~khv~~~~~~~rL~~~KGkr~vr~~eV~~~~s  160 (827)
T KOG0443|consen   81 AAIKTVELDDYLGGRAVQHREVQGHESEKFLSYFKPGIIYQEGGVASGFKHVETEEYQVRLFHCKGKRNVRVKEVPFSWS  160 (827)
T ss_pred             eeeeeEehhhhhCCCcceeehhcccchHHHHhhccCCceecccccccCcccccccceeeEEEEEccceeEEEEEEEeehh
Confidence            99999999999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             cccCCCeEEEECCCEEEEEeCCCCCHHHHHHHHHHHHHhhhccCCCceeEEEEcCCccCCCCChhhHHHHhCCCCC-CCC
Q 004590          161 SLNHNDVFIVDTASKIFLFSGCNSSIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAP-IPR  239 (743)
Q Consensus       161 SLns~d~FIL~~~~~iyvW~G~~s~~~ek~ka~~~a~~i~~~~~~g~~~v~~v~eg~~~~~~e~~eFw~~lgg~~~-~~~  239 (743)
                      |||++||||||+++.||+|+|+.||+.||+||+++|+.|++.+|.|+|+|.+||+|+.+.+++..+||..+||..+ ++.
T Consensus       161 S~N~gDvFILD~g~~i~qw~G~~Ss~~ER~KAl~~~~~IrD~e~~Gr~~V~vvdd~~~~~d~d~~~~~~~~~g~~~~~~~  240 (827)
T KOG0443|consen  161 SLNHGDVFILDTGSKIYQWNGPNSSIQERAKALEVVQYIRDNERDGRCEVAVVDDGKEAADSDLGEFWGFVLGFAPALPK  240 (827)
T ss_pred             hcCCCcEEEEEcCCceEEEcCCcccHHHHHHHHHHHHHhhccCCCCceeEEEecCcccccCchHHHHHHhhcCcCccCCC
Confidence            9999999999999999999999999999999999999999999999999999999987777888999999998877 555


Q ss_pred             CCCCcCCCCCCCCCcEEEEEe-CCCCeE--EeccCCCcccccCCCceEEEeCC-CeEEEEeccCCCHHHHHHHHHHHHHH
Q 004590          240 DSPSAFQQQPDTPSTTFFWIN-LQGKLC--QIAANSLNKDMLEKDKCYMLDCV-NEVFVWTGRNTSITERRISISASEDF  315 (743)
Q Consensus       240 ~~~~~~~~~~~~~~~rLy~~~-~~G~~~--~~e~~~~~q~~L~~~~v~ilD~~-~eiyvW~G~~a~~~er~~a~~~A~~y  315 (743)
                      ....++++......++||+++ ++|.+.  .+...||+|++|++++||||||| .+||||+|+.|+.+||+.||..|++|
T Consensus       241 ~~~~~~~~~~~s~~~kLYkVsd~~g~l~v~~va~~~l~qdlLd~~dCYILD~g~~~IfVW~Gr~as~~ERkaAm~~AeeF  320 (827)
T KOG0443|consen  241 KSPDDDDEQANSAAAKLYKVSDASGGLKVPVVADGPLTKDLLDTEDCYILDCGGGEIFVWKGRQASLDERKAAMSSAEEF  320 (827)
T ss_pred             CCcchhhhhhhccccEEEEEeccCCCccccccccchhhHHhhccCCeEEEecCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            555445555667789999995 567654  33446799999999999999999 99999999999999999999999999


Q ss_pred             HHhcCCCCCCeEEEecCCccchhhhhccccCCCCCCCcccccchhhhhhhhhhccCCCCCC---Ccc--CCCCccccCCc
Q 004590          316 LRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDEGREKVAAIFKQQGHDVKEL---PEE--DFEPYVNCRGI  390 (743)
Q Consensus       316 ~~~~~r~~~~~i~~v~eG~Ep~~Fk~~F~~W~~~~~~~~~~~~~~k~a~~~~~~~~d~~~l---p~~--~~~~~~~~~g~  390 (743)
                      +++.+||++|.|++|.||.|++.||++|.+|++...+.....+++++|.+++.+++|+..|   |.+  +.+++||++|+
T Consensus       321 lk~k~yP~~TqV~rv~EG~Esa~FKq~F~~W~~~~~t~~~~~~rG~va~l~q~~~~Dv~~L~~~~~~aa~~~mvddg~G~  400 (827)
T KOG0443|consen  321 LKKKKYPPNTQVVRVLEGAESAPFKQLFDSWPDKDQTNGKEEGRGKVAALLQVKGFDVTGLHKSPKMAAQPQMVDDGSGK  400 (827)
T ss_pred             HHhccCCCCceEEEecCCCcchhHHHHHhhCccccccccccccccccceeeeecccchhhcccCccccccccceecCCCc
Confidence            9999999999999999999999999999999998777666778899999888888999999   333  44578999999


Q ss_pred             EEEEEEeCCceeecCCccccceecccEEEEEeecCC-CCcceEEEEEEccCCCCHHHHHHHHHHHHHHHHhcCCCceEEe
Q 004590          391 LKVWRVNGDELSLLPAAEQMKLFSGDCYIVKYTYPG-NGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQ  469 (743)
Q Consensus       391 l~vwri~~~~~~~vp~~~~G~Fys~d~Yiv~~ty~~-~~~~~~~iy~W~G~~ss~~e~~~aa~~~~~l~~~~~~~~~q~r  469 (743)
                      ++||||++..+++||..++|+||+||||||+|+|+. +.+..++||.|+|++|+.+++.+|+.+|++|++.++|.|+|+|
T Consensus       401 ~~Vwrv~~~~~~~v~~~~~g~fy~GdcYlvlYtY~~~~~~~~~iiY~W~G~qAs~ee~~~a~~~A~~l~~s~kg~~vq~r  480 (827)
T KOG0443|consen  401 LQVWRVEGDEKQPVDIADYGKFYGGDCYLVLYTYPRGEERTEHIIYVWQGKQASQEERAAAISLAKALVESLKGVPVQVR  480 (827)
T ss_pred             EEEEEEcCceeeecChHHhCcccCCCeEEEEEeeccCCcccceEEEEEecccCCHHHHHHHHHHHHHHhhhcCCceeEEE
Confidence            999999999999999999999999999999999985 4589999999999999999999999999999999999999999


Q ss_pred             eeccCCcHHHHhhccc-EEEEEcccccCcceeeeecCcccccccccceEEEEEEecCCCceEEEEeccCCCccCCCceEE
Q 004590          470 VHQDMEPVQFFLIFQS-LIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAFQVDRVSTCLNSSYCYI  548 (743)
Q Consensus       470 v~Qg~Ep~~Fl~lF~~-~~i~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~v~g~~~~~~~~~ev~~~~~sL~s~d~fi  548 (743)
                      +.||+||+||++||+| |+|++||++.           .+++++..+++||||+|+.+.|++|+||++.++||||+||||
T Consensus       481 v~~GkEP~hF~~iFqgkliifkgg~s~-----------~g~~~~~~~t~LFqV~Gt~~~n~kAveV~~~A~SLNSsd~fv  549 (827)
T KOG0443|consen  481 IYEGKEPPHFLAIFQGKLIIFKGGTSE-----------EGNTYPAPSTRLFQVQGTGPSNTKAVEVPAVASSLNSSDCFV  549 (827)
T ss_pred             eecCCCChHHHHhhCCceEEEecCcCC-----------CCCccCCCceEEEEEeccCcccceeEeeccccccccccceEE
Confidence            9999999999999999 9999999863           134566678999999999999999999999999999999999


Q ss_pred             EEcCCEEEEEECCCCCHHHHHHHHHHHHHhCCCcceEEeecCCChhhhHHhcCCCCCCCCccc-ccCCCCCCceEEEEcc
Q 004590          549 LQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSEPEVFWNALGGKSEYPREKE-IKGFIEDPHLFTCTLT  627 (743)
Q Consensus       549 l~~~~~vyvW~G~~s~~~e~~~A~~~a~~l~~~~~v~~v~EG~E~~eFw~~Lgg~~~y~~~~~-~~~~~~~prLf~~s~~  627 (743)
                      |.++.++|+|+|++|+.+||++|..++..|.. .+...+.||+||++||++|||+.+|++.+. .....+.||||.|++.
T Consensus       550 L~t~s~~ylW~G~gss~~e~e~A~~v~~~l~~-~~~~~v~EG~Ep~~FWe~LGGk~~Y~~sk~~~~~~~~~PrLF~Cs~~  628 (827)
T KOG0443|consen  550 LKTGSSVYLWCGKGSSGDEREMAKRVLDLLKR-CQSTAVKEGSEPDEFWELLGGKAEYPSSKRLEEKPERDPRLFSCSNK  628 (827)
T ss_pred             EecCCeEEEEeCCCCCHHHHHHHHHHHHHHhc-CChhhhhcCCCchhhHHHcCCCCCCCcCccccccCCCCCcEEEEEec
Confidence            99999999999999999999999999999962 455678999999999999999999998873 3456788999999999


Q ss_pred             CCceEEeeecccccCCCCCCCEEEEeCCCeEEEEecCCCCHHHHHHHHHHHHHHHhhcccccCCCCCCcEEEccCCCCCh
Q 004590          628 EGDLKVKEIYNFTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPP  707 (743)
Q Consensus       628 ~G~~~v~ei~~f~Q~dL~~~~v~iLD~~~~vyVWiG~~as~~ek~~a~~~A~~Y~~~~~~~~~r~~~~pi~~V~~G~Ep~  707 (743)
                      +|.|.++||++|.|+||.++|||||||+++||||||++++++||..|+.+|++|++++ ...||++.+||++|.||+||+
T Consensus       629 ~g~f~~~EI~~F~QdDL~tdDi~lLDt~~evfvWvG~~a~~~eK~~Al~~~~~yl~~~-~p~gr~~~TPI~vV~qG~EPp  707 (827)
T KOG0443|consen  629 TGSFVVEEIYNFTQDDLMTDDIMLLDTWSEVFVWVGQEANEKEKEEALTIGQKYLETD-LPEGRDPRTPIYVVKQGHEPP  707 (827)
T ss_pred             CCcEEEEEecCcchhhccccceEEEecCceEEEEecCCCChhHHHHHHHHHHHHHhcc-CcccCCCCCceEEecCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998 224899999999999999999


Q ss_pred             hchhcc-ccCccccccCCCcHHHHHHHhcC
Q 004590          708 FFTCFF-AWDPLKAKMHGNSFERKLAILKG  736 (743)
Q Consensus       708 ~F~~~F-~W~~~~~~~~~~~~~~~~~~~~~  736 (743)
                      .||++| +||+.+     .+|+.+++.|.+
T Consensus       708 ~Ftg~F~~WD~~k-----wS~~~~~~~l~~  732 (827)
T KOG0443|consen  708 FFTGFFLSWDPSK-----WSFQKKLKDLKN  732 (827)
T ss_pred             hhhccccccCCcc-----cccchHHHHHhc
Confidence            999999 899998     566777776643

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>smart00262 GEL Gelsolin homology domain Back     alignment and domain information
>smart00262 GEL Gelsolin homology domain Back     alignment and domain information
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) [] Back     alignment and domain information
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) [] Back     alignment and domain information
>PTZ00395 Sec24-related protein; Provisional Back     alignment and domain information
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00395 Sec24-related protein; Provisional Back     alignment and domain information
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] Back     alignment and domain information
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
1d0n_A729 The Crystal Structure Of Calcium-Free Equine Plasma 8e-90
2fgh_A731 Atp Bound Gelsolin Length = 731 9e-90
3ffn_A782 Crystal Structure Of Calcium-Free Human Gelsolin Le 1e-88
1rgi_G346 Crystal Structure Of Gelsolin Domains G1-G3 Bound T 7e-46
1rgi_G346 Crystal Structure Of Gelsolin Domains G1-G3 Bound T 2e-18
3fg7_A398 The Crystal Structure Of Villin Domain 6 Length = 3 4e-45
3ffk_A377 Crystal Structure Of Human Gelsolin Domains G1-G3 B 3e-44
3ffk_A377 Crystal Structure Of Human Gelsolin Domains G1-G3 B 2e-19
1h1v_G331 Gelsolin G4-G6ACTIN COMPLEX Length = 331 1e-42
1p8x_A344 The Calcium-activated C-terminal Half Of Gelsolin L 1e-42
1nph_A329 Gelsolin Domains 4-6 In Active, Actin Free Conforma 4e-42
3fg6_A371 Structure Of The C-terminus Of Adseverin Length = 3 3e-38
1j72_A347 Crystal Structure Of Mutant Macrophage Capping Prot 4e-32
1j72_A347 Crystal Structure Of Mutant Macrophage Capping Prot 5e-15
1jhw_A347 Ca2+-Binding Mimicry In The Crystal Structure Of Th 6e-32
1jhw_A347 Ca2+-Binding Mimicry In The Crystal Structure Of Th 4e-15
1p8z_G136 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 5e-22
1p8z_G136 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 6e-06
1yag_G125 Structure Of The Yeast Actin-human Gelsolin Segment 5e-22
1yag_G125 Structure Of The Yeast Actin-human Gelsolin Segment 1e-04
1d4x_G126 Crystal Structure Of Caenorhabditis Elegans Mg-Atp 5e-22
1d4x_G126 Crystal Structure Of Caenorhabditis Elegans Mg-Atp 3e-05
3ci5_G126 Complex Of Phosphorylated Dictyostelium Discoideum 5e-22
3ci5_G126 Complex Of Phosphorylated Dictyostelium Discoideum 1e-04
3cip_G128 Complex Of Dictyostelium Discoideum Actin With Gels 5e-22
3cip_G128 Complex Of Dictyostelium Discoideum Actin With Gels 1e-04
2ff3_A150 Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Mo 6e-22
2ff3_A150 Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Mo 4e-05
3tu5_B297 Actin Complex With Gelsolin Segment 1 Fused To Cobl 6e-22
3tu5_B297 Actin Complex With Gelsolin Segment 1 Fused To Cobl 6e-05
1t44_G147 Structural Basis Of Actin Sequestration By Thymosin 7e-22
1t44_G147 Structural Basis Of Actin Sequestration By Thymosin 2e-05
1c0f_S127 Crystal Structure Of Dictyostelium Caatp-Actin In C 1e-21
1c0f_S127 Crystal Structure Of Dictyostelium Caatp-Actin In C 7e-05
1eqy_S125 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 1e-21
1eqy_S125 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 8e-05
2vik_A126 Refined Structure Of The Actin-Severing Domain Vill 2e-19
2vik_A126 Refined Structure Of The Actin-Severing Domain Vill 3e-04
2llf_A107 Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2 1e-14
1svq_A114 Structure Of Severin Domain 2 In Solution Length = 7e-11
1svy_A114 Severin Domain 2, 1.75 Angstrom Crystal Structure L 9e-11
1kcq_A104 Human Gelsolin Domain 2 With A Cd2+ Bound Length = 6e-08
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma Gelsolin. Length = 729 Back     alignment and structure 
Iteration: 1

 Score =  328 bits (840), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 218/739 (29%), Positives = 362/739 (48%), Gaps = 67/739 (9%)
Query: 12  FEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGN 71
           F  AGK+ GL+IW +E   LV VP + +G F+TG AYVIL T  L++G  Q+D+HYWLGN
Sbjct: 6   FLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGN 65
Query: 72  DVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRSGK 131
           + ++++S   +   ++LD  L    VQ+REVQG E+  FL YF+  +     KY  + G 
Sbjct: 66  ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGL-----KYK-KGGV 119
Query: 132 SNG-------ETYKISMLTCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNS 184
           ++G       E     +L  KG  VVR  EVP S  S N+ D FI+D  + I+ + G  S
Sbjct: 120 ASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKS 179
Query: 185 SIQERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSA 244
           +  ER KA +V + I++++  G+  V+  E+G     ++      + G    +P  +   
Sbjct: 180 NRFERLKATQVSKGIRDNERSGRAQVSVFEEG-----AEPEAMLQVLGPKPTLPEATEDT 234
Query: 245 FQQQPDTPSTTFFWINLQGKLCQIAA-----NSLNKDMLEKDKCYMLDCVNE--VFVWTG 297
            ++          +    G    + +     N   +  L  + C++LD   +  +FVW G
Sbjct: 235 VKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKG 294
Query: 298 RNTSITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQIAEPKLYDE 357
           +  ++ ER+ ++  + DF+        T ++ L EG ET +FR +F +W    +P   D+
Sbjct: 295 KQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNW---RDP---DQ 348
Query: 358 GREKVAAIFKQQGHDVKELPEEDFEPYVNCR------------GILKVWRVNGDELSLLP 405
                 A        V+ +P +    + +              G  ++WRV G     + 
Sbjct: 349 TEGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVD 408
Query: 406 AAEQMKLFSGDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDST-RGE 464
            A   + + GD YI+ Y Y    R   +IY W G +S T+D  AA + ++A +D    G 
Sbjct: 409 PATYGQFYGGDSYIILYNYRHGSRQGQIIYNWQGAQS-TQDEVAASAILTAQLDEELGGT 467
Query: 465 AVMAQVHQDMEPVQFFLIF--QSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQ 522
            V ++V Q  EP     +F  + +IV+KGG S +  +                  LF ++
Sbjct: 468 PVQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSREGGQTA-----------PASTRLFQVR 516
Query: 523 GTSPCNMQAFQVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTW 582
            +S    +A ++   +  LNS+  ++L+  ++ + W+G  +S  +      ++ ++    
Sbjct: 517 ASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLRA-- 574
Query: 583 QPISVREGSEPEVFWNALGGKSEY---PREKEIKGFIEDPHLFTCTLTEGDLKVKEIYN- 638
           QP+ V EGSEP+ FW ALGGK+ Y   PR K+ K     P LF C+   G   ++E+   
Sbjct: 575 QPVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGE 634
Query: 639 FTQDDLTTEDILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIY 698
           F Q+DL T+D+++LD   +++VW+G  S    K +AL   +++++TD         TPI 
Sbjct: 635 FMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPAHR--DRRTPIT 692
Query: 699 VVTEGHEPPFFTCFF-AWD 716
           VV +G EPP F  +F  WD
Sbjct: 693 VVKQGFEPPSFVGWFLGWD 711
>pdb|2FGH|A Chain A, Atp Bound Gelsolin Length = 731 Back     alignment and structure
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin Length = 782 Back     alignment and structure
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin Length = 346 Back     alignment and structure
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin Length = 346 Back     alignment and structure
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6 Length = 398 Back     alignment and structure
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To Actin Length = 377 Back     alignment and structure
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To Actin Length = 377 Back     alignment and structure
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX Length = 331 Back     alignment and structure
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin Length = 344 Back     alignment and structure
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation Identifies Sites Of Regulatory Calcium Ions Length = 329 Back     alignment and structure
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin Length = 371 Back     alignment and structure
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein (Cap G) With Actin-Severing Activity In The Ca2+-Free Form Length = 347 Back     alignment and structure
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein (Cap G) With Actin-Severing Activity In The Ca2+-Free Form Length = 347 Back     alignment and structure
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G Length = 347 Back     alignment and structure
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G Length = 347 Back     alignment and structure
>pdb|1P8Z|G Chain G, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Residues Val26-Glu156 Length = 136 Back     alignment and structure
>pdb|1P8Z|G Chain G, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Residues Val26-Glu156 Length = 136 Back     alignment and structure
>pdb|1YAG|G Chain G, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 125 Back     alignment and structure
>pdb|1YAG|G Chain G, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 125 Back     alignment and structure
>pdb|1D4X|G Chain G, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 126 Back     alignment and structure
>pdb|1D4X|G Chain G, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 126 Back     alignment and structure
>pdb|3CI5|G Chain G, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 126 Back     alignment and structure
>pdb|3CI5|G Chain G, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 126 Back     alignment and structure
>pdb|3CIP|G Chain G, Complex Of Dictyostelium Discoideum Actin With Gelsolin Length = 128 Back     alignment and structure
>pdb|3CIP|G Chain G, Complex Of Dictyostelium Discoideum Actin With Gelsolin Length = 128 Back     alignment and structure
>pdb|2FF3|A Chain A, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif Hybrid In Complex With Actin Length = 150 Back     alignment and structure
>pdb|2FF3|A Chain A, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif Hybrid In Complex With Actin Length = 150 Back     alignment and structure
>pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl Segment Length = 297 Back     alignment and structure
>pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl Segment Length = 297 Back     alignment and structure
>pdb|1T44|G Chain G, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 147 Back     alignment and structure
>pdb|1T44|G Chain G, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 147 Back     alignment and structure
>pdb|1C0F|S Chain S, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 127 Back     alignment and structure
>pdb|1C0F|S Chain S, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 127 Back     alignment and structure
>pdb|1EQY|S Chain S, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 125 Back     alignment and structure
>pdb|1EQY|S Chain S, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 125 Back     alignment and structure
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t, Determined By Solution Nmr, Minimized Average Structure Length = 126 Back     alignment and structure
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t, Determined By Solution Nmr, Minimized Average Structure Length = 126 Back     alignment and structure
>pdb|2LLF|A Chain A, Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2 Length = 107 Back     alignment and structure
>pdb|1SVQ|A Chain A, Structure Of Severin Domain 2 In Solution Length = 114 Back     alignment and structure
>pdb|1SVY|A Chain A, Severin Domain 2, 1.75 Angstrom Crystal Structure Length = 114 Back     alignment and structure
>pdb|1KCQ|A Chain A, Human Gelsolin Domain 2 With A Cd2+ Bound Length = 104 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
1d0n_A729 Horse plasma gelsolin; mixed alpha-beta structure, 0.0
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 1e-87
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 2e-64
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 5e-85
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 3e-47
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 3e-08
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 2e-82
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 2e-64
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 5e-80
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 2e-55
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 1e-06
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 1e-42
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 3e-16
2ff3_A150 Gelsolin; protein-protein complex, structural prot 1e-39
2ff3_A150 Gelsolin; protein-protein complex, structural prot 1e-15
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 3e-39
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 4e-16
2vik_A126 Villin 14T; actin-binding protein, capping protein 2e-31
2vik_A126 Villin 14T; actin-binding protein, capping protein 5e-17
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 6e-31
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 1e-14
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 4e-06
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 1e-05
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 9e-30
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 3e-13
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 4e-05
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G* Length = 729 Back     alignment and structure
 Score =  534 bits (1377), Expect = 0.0
 Identities = 214/747 (28%), Positives = 353/747 (47%), Gaps = 43/747 (5%)

Query: 9   DSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYW 68
              F  AGK+ GL+IW +E   LV VP + +G F+TG AYVIL T  L++G  Q+D+HYW
Sbjct: 3   HPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYW 62

Query: 69  LGNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLR 128
           LGN+ ++++S   +   ++LD  L    VQ+REVQG E+  FL YF+  +    G  +  
Sbjct: 63  LGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASG 122

Query: 129 SGKSNGETYKISML-TCKGDHVVRVKEVPFSRSSLNHNDVFIVDTASKIFLFSGCNSSIQ 187
                     +  L   KG  VVR  EVP S  S N+ D FI+D  + I+ + G  S+  
Sbjct: 123 FKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRF 182

Query: 188 ERAKALEVVQYIKEDKHGGKCGVATVEDGKFVGDSDVGEFWSLFGGYAPIPRDSPSAFQQ 247
           ER KA +V + I++++  G+  V+  E+G      +      + G    +P  +    ++
Sbjct: 183 ERLKATQVSKGIRDNERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEATEDTVKE 237

Query: 248 QPDTPSTTFFW--INLQGKLC---QIAANSLNKDMLEKDKCYMLDCVNE--VFVWTGRNT 300
                     +   N  G +        N   +  L  + C++LD   +  +FVW G+  
Sbjct: 238 DAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQA 297

Query: 301 SITERRISISASEDFLRNQGRTTGTHLTFLTEGLETTVFRSYFDSWPQ-IAEPKLYDEGR 359
           ++ ER+ ++  + DF+        T ++ L EG ET +FR +F +W        L     
Sbjct: 298 NMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYL 357

Query: 360 EKVAAIFKQQGHDVKELPEE-----DFEPYVNCRGILKVWRVNGDELSLLPAAEQMKLFS 414
               A  ++   D   L              +  G  ++WRV G     +  A   + + 
Sbjct: 358 SSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVDPATYGQFYG 417

Query: 415 GDCYIVKYTYPGNGRDENVIYAWFGHESMTEDRAAAISHMSAIVDSTRGEAVMAQVHQDM 474
           GD YI+ Y Y    R   +IY W G +S  ++ AA+    + + +   G  V ++V Q  
Sbjct: 418 GDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGK 477

Query: 475 EPVQFFLIF--QSLIVFKGGLSTQYKKFIVEEGIVDETYDEKKMALFCIQGTSPCNMQAF 532
           EP     +F  + +IV+KGG S +  +                  LF ++ +S    +A 
Sbjct: 478 EPAHLMSLFGGKPMIVYKGGTSREGGQ-----------TAPASTRLFQVRASSSGATRAV 526

Query: 533 QVDRVSTCLNSSYCYILQNGASVFTWIGNLSSSRDHDLLDRMVELINPTWQPISVREGSE 592
           ++   +  LNS+  ++L+  ++ + W+G  +S  +      ++ ++    QP+ V EGSE
Sbjct: 527 EIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLRA--QPVQVAEGSE 584

Query: 593 PEVFWNALGGKSEY---PREKEIKGFIEDPHLFTCTLTEGDLKVKEIY-NFTQDDLTTED 648
           P+ FW ALGGK+ Y   PR K+ K     P LF C+   G   ++E+   F Q+DL T+D
Sbjct: 585 PDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDD 644

Query: 649 ILVLDCCREIYVWIGCHSDLNSKQQALNIGQKFLETDILVEGLSLETPIYVVTEGHEPPF 708
           +++LD   +++VW+G  S    K +AL   +++++TD         TPI VV +G EPP 
Sbjct: 645 VMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTD--PAHRDRRTPITVVKQGFEPPS 702

Query: 709 FT-CFFAWDPLKAKMHGNSFERKLAIL 734
           F   F  WD     +  +  +R LA L
Sbjct: 703 FVGWFLGWDDSYWSV--DPLDRALAEL 727
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} Length = 398 Back     alignment and structure
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} Length = 398 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Length = 344 Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Length = 344 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Length = 128 Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Length = 128 Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Length = 150 Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Length = 150 Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Length = 147 Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Length = 147 Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Length = 126 Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Length = 126 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 743
d3cipg1124 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) 5e-40
d3cipg1124 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) 8e-22
d1j72a1114 d.109.1.1 (A:11-124) Macrophage capping protein Ca 5e-38
d1j72a1114 d.109.1.1 (A:11-124) Macrophage capping protein Ca 2e-21
d2vika_126 d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chic 7e-31
d2vika_126 d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chic 3e-22
d2fh1a1121 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapien 2e-30
d2fh1a1121 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapien 6e-25
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 5e-28
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 9e-17
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 2e-11
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 5e-10
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 0.003
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 1e-26
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 5e-17
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 1e-13
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 2e-08
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 2e-26
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 5e-12
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 5e-12
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 1e-06
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 2e-24
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 2e-16
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 2e-13
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 1e-08
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 4e-22
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 4e-19
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 4e-12
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 1e-06
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 6e-21
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 4e-13
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 6e-12
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 5e-06
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 7e-05
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 6e-20
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 1e-12
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 7e-12
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 2e-06
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 8e-06
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 0.004
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Gelsolin-like
domain: Gelsolin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 5e-40
 Identities = 50/117 (42%), Positives = 73/117 (62%)

Query: 10  SAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWL 69
             F  AGK+ GL+IW +E   LV VP + +G F+TG AYVIL T  L++G  Q+D+HYWL
Sbjct: 5   PEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWL 64

Query: 70  GNDVNEEDSTLVSDKALELDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYS 126
           GN+ ++++S   +   ++LD  L    VQ+REVQG E+  FL YF+  +    G  +
Sbjct: 65  GNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVA 121
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Length = 126 Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Length = 126 Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query743
d3cipg1124 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1j72a1114 Macrophage capping protein Cap G {Human (Homo sapi 100.0
d2vika_126 Villin, domain 1 (res. 1-126) {Chicken (Gallus gal 100.0
d2fh1a1121 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2fh1a1121 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cipg1124 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2vika_126 Villin, domain 1 (res. 1-126) {Chicken (Gallus gal 100.0
d1j72a1114 Macrophage capping protein Cap G {Human (Homo sapi 100.0
d2fh1a3113 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.96
d1j72a2116 Macrophage capping protein Cap G {Human (Homo sapi 99.95
d2fh1a3113 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.93
d2fh1a296 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1d0na3121 Gelsolin {Horse (Equus caballus) [TaxId: 9796]} 99.93
d1kcqa_104 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1svya_102 Severin, domain 2 {Dictyostelium discoideum [TaxId 99.92
d1j72a3107 Macrophage capping protein Cap G {Human (Homo sapi 99.92
d1d0na3121 Gelsolin {Horse (Equus caballus) [TaxId: 9796]} 99.91
d2fh1a296 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.91
d1j72a3107 Macrophage capping protein Cap G {Human (Homo sapi 99.9
d1j72a2116 Macrophage capping protein Cap G {Human (Homo sapi 99.88
d1svya_102 Severin, domain 2 {Dictyostelium discoideum [TaxId 99.87
d1kcqa_104 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.87
d1pd0a4173 Sec24 {Baker's yeast (Saccharomyces cerevisiae) [T 97.6
d1pd0a4173 Sec24 {Baker's yeast (Saccharomyces cerevisiae) [T 97.23
d2qtva4142 Sec23 {Baker's yeast (Saccharomyces cerevisiae) [T 92.01
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Gelsolin-like
domain: Gelsolin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=281.61  Aligned_cols=122  Identities=41%  Similarity=0.680  Sum_probs=118.5

Q ss_pred             CCCHHCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             77000038953567999997977865699998854469869999411238999913599980688792447789997999
Q 004590            8 IDSAFEGAGKKLGLEIWCIENLQLVSVPKSSHGKFYTGSAYVILNTALLKSGPPQHDIHYWLGNDVNEEDSTLVSDKALE   87 (743)
Q Consensus         8 ~~~~~~~~g~~~~l~vWrIe~~~~~~v~~~~~G~Fy~gd~YIvl~t~~~~~~~~~~~i~~W~G~~ss~~e~g~aa~~~~e   87 (743)
                      ..|+|.++|+++||+||||+++++++||+++||+||+||||||+|||..++++.+++||||+|++||++++++||++|++
T Consensus         3 ~~p~~~~~g~~~Gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIil~ty~~~~g~~~~~iy~W~G~~ss~~e~~~aa~~ave   82 (124)
T d3cipg1           3 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQ   82 (124)
T ss_dssp             CCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             CCHHHHCCCCCCCEEEEEEECCEEEECCHHHCCEEECCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             56112057987866999993998878897880577089879999989858997767799997787976689999999999


Q ss_pred             HHHHHCCCCCEEEEECCCCCHHHHHCCCCCEEECCCCCCCCC
Q ss_conf             998819994099962489986788501894999069646899
Q 004590           88 LDAALGSCTVQYREVQGQETEKFLSYFRPCIIPLDGKYSLRS  129 (743)
Q Consensus        88 Ld~~l~g~~~q~Re~Qg~Es~~Fl~~F~~~~i~~~Gg~~~~~  129 (743)
                      ||++|++.++|+||+||+||++||+||+++|+|++||++|||
T Consensus        83 Ld~~l~g~~vq~R~~Qg~Ep~~Fl~lF~~~~ii~~GG~~sgf  124 (124)
T d3cipg1          83 LDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF  124 (124)
T ss_dssp             HHHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred             HHHHCCCCCCEEEEECCCCCHHHHHHHCCCEEEEECCCCCCC
T ss_conf             999839985178876277998999970797299057746688
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure