Citrus Sinensis ID: 004611

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740--

MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAMEAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGSFGPSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANMGDPNASIPTPEPVT

ccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccEEEEEEEcccccEEEEEEcccccccccHHHHccccccccccccccccccccccccEEEcccccEEEcccccEEEEEEEEcccccEEccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEEcccEEEEccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHcccccccEEEcccccEEEEEcccccccccEEEcccccccccccccccccccccccEEEEcEEEEccccEEEccEEEEccEEEEEccccccccccccccccEEcccccEEcccccEEEcccccEEEEEccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHcccEEEEEcccccccccHHHHHHHHccccccccccccccccccccHHHHccEEEEEccccccccHHHHHHHccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccEEEEcccEEEEcccccccccccccccc

ccccHHHHHHHHHHHHHHHHHHHHHHcccEcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHEcccHHHHccEEEEEEEEccEEEEEEEEcccccccccHHHHHHccccccccHHHccccccccccccEEccccEEEccccccEEEEEEEEcccccEEEEccccHHHccccEEccHHHHccEEEccccccEEEEccccEEEEEEEEcccccEEccccccccEEcccHHHHHHHHHHHHccccccccccccccccccccccccEEEHHHHHHHHccccccEEEccccccEEEccEEcccccccccccccccccEcccEccccccHHcccEEEEEEEEEEccEEEEEEEEEEccEEEEEEccEccccccccccccEcccccEEEEccccEEEEcEEEEEEEcccccHHHHHHHccEEEEEEEcccccHHHHHcccccHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHcccEEEEEHHHcccHHHHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHccccEEEcccccccccccccHHHHHHcccEEEEccccccccEccHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHcccccEccccEccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccHHHHHHHcccccccccccccEccEEEEcHHHccccccEEEEccEEEEEEEcccccccccccccc

MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQIlgrrqvlpavphlldtvqvegtfpdgtklitihdpiasengnlelalhgsflpvpamdkfpgiednnvpgriipgggsitlnhGRKAVILKVVntgdrpvqvgshyhfievnpylvfdrRKAFGMRLNiaagtatrfepgesKIVKLISIggrkvirggngivdgptddagcSAAMEAVKLRQfgnqeeantsvgvagedryLTTVISREAyanmygpttgdkiqlgdtELYAEIEsdfsvygdecvfgggkviregmgqacghHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALgkagnpdimndvhpnmiiganteviaGERFIVTAGaidchvhficpqlAHDAIASGittlvgggtgpadgtrattctpapsqmklmlqstddlplnfgftgkgnsakpdELHEIIKAGAMGLklhedwgstpaaIDNCLTVAEEYDIQVNIHtdtlnesgfveHTIAAFkgrtihtyhsegaggghapdiIKVCgvknvlpsstnptrpytsntidEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKmksqrgsfgpsaadndnLRIRRYIAKYTinpaiangfsqfvgsvevgKLADLvlwkpsffgakpeMVIKGGAIAwanmgdpnasiptpepvt

MKLTPREAeklglhnagylAQKRLARGLRLNYTEAVALIATqtlefvrdGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGggsitlnhgRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAagtatrfepgeskIVKLIsiggrkvirggnGIVDGPTDDAGCSAAMEAVKLRQFgnqeeantsvgvagedrYLTTVISREAyanmygpttgdkIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNvlpsstnptrpytSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHkmksqrgsfgpsaadndnLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANmgdpnasiptpepvt

***********GLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAMEAVKLRQF*******TSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGT*****************************LNFGF***********LHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLP********YTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQ********************NLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWAN***************

*KLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKF****DNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSA******************************TVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQA*****AKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIIS******GRIGEVISRTWQTAHKMKSQRG****SAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANMGDPNASIPTPEPV*

MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAMEAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQ*************PSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANMGDPNASIPTPEPVT

*KLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAMEAVKLRQFGNQ*******GVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGSFGPSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANMGDPNASIPTP****

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		742	2.2.26 [Sep-21-2011]
P07374		840	Urease OS=Canavalia ensif	N/A	no	0.998	0.882	0.780	0.0
P0CS22		833	Urease OS=Cryptococcus ne	yes	no	0.989	0.881	0.595	0.0
P0CS23		833	Urease OS=Cryptococcus ne	N/A	no	0.989	0.881	0.595	0.0
Q6A3P9		838	Urease OS=Neosartorya fum	yes	no	0.994	0.880	0.609	0.0
O13465		833	Urease OS=Cryptococcus ne	N/A	no	0.989	0.881	0.590	0.0
O00084		835	Urease OS=Schizosaccharom	yes	no	0.991	0.881	0.606	0.0
Q11VN3		570	Urease subunit alpha OS=C	yes	no	0.638	0.831	0.701	0.0
A9GP84		571	Urease subunit alpha OS=S	yes	no	0.638	0.830	0.698	0.0
A6SZ07		566	Urease subunit alpha OS=J	yes	no	0.630	0.826	0.694	0.0
Q07K73		570	Urease subunit alpha OS=R	yes	no	0.637	0.829	0.684	0.0

>sp\|P07374\|UREA_CANEN Urease OS=Canavalia ensiformis PE=1 SV=3	Back alignment and function desciption

 Score = 1193 bits (3087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/744 (78%), Positives = 655/744 (88%), Gaps = 3/744 (0%)

Query: 1   MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDI 60
           MKL+PRE EKLGLHNAGYLAQKRLARG+RLNYTEAVALIA+Q +E+ RDG+KTVA+LM +
Sbjct: 1   MKLSPREVEKLGLHNAGYLAQKRLARGVRLNYTEAVALIASQIMEYARDGEKTVAQLMCL 60

Query: 61  GKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPA 120
           G+ +LGRRQVLPAVPHLL+ VQVE TFPDGTKL+T+HDPI+ ENG L+ AL GS LPVP+
Sbjct: 61  GQHLLGRRQVLPAVPHLLNAVQVEATFPDGTKLVTVHDPISRENGELQEALFGSLLPVPS 120

Query: 121 MDKFPGI-EDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYL 179
           +DKF    EDN +PG I+     +TLN GRKAVILKV + GDRP+QVGSHYHFIEVNPYL
Sbjct: 121 LDKFAETKEDNRIPGEILCEDECLTLNIGRKAVILKVTSKGDRPIQVGSHYHFIEVNPYL 180

Query: 180 VFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAA 239
            FDRRKA+GMRLNIAAGTA RFEPG+ K V L+SI G KVIRGGN I DGP ++    AA
Sbjct: 181 TFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLVSIEGNKVIRGGNAIADGPVNETNLEAA 240

Query: 240 MEAVKLRQFGNQEEANTSVGVAGEDRY--LTTVISREAYANMYGPTTGDKIQLGDTELYA 297
           M AV+ + FG++EE + S G   ED      T I R+ YAN YGPTTGDKI+LGDT L A
Sbjct: 241 MHAVRSKGFGHEEEKDASEGFTKEDPNCPFNTFIHRKEYANKYGPTTGDKIRLGDTNLLA 300

Query: 298 EIESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIK 357
           EIE D+++YGDECVFGGGKVIR+GMGQ+CGH  A SLDTVITNAVIID+TGI KADIGIK
Sbjct: 301 EIEKDYALYGDECVFGGGKVIRDGMGQSCGHPPAISLDTVITNAVIIDYTGIIKADIGIK 360

Query: 358 NGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAI 417
           +GLI ++GKAGNPDIMN V  NMIIGANTEVIAGE  IVTAGAIDCHVH+ICPQL ++AI
Sbjct: 361 DGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICPQLVYEAI 420

Query: 418 ASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHE 477
           +SGITTLVGGGTGPA GTRATTCTP+P+QM+LMLQSTDDLPLNFGFTGKG+S+KPDELHE
Sbjct: 421 SSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNFGFTGKGSSSKPDELHE 480

Query: 478 IIKAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRT 537
           IIKAGAMGLKLHEDWGSTPAAIDNCLT+AE +DIQ+NIHTDTLNE+GFVEH+IAAFKGRT
Sbjct: 481 IIKAGAMGLKLHEDWGSTPAAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRT 540

Query: 538 IHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIP 597
           IHTYHSEGAGGGHAPDIIKVCG+KNVLPSSTNPTRP TSNTIDEHLDMLMVCHHL ++IP
Sbjct: 541 IHTYHSEGAGGGHAPDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDMLMVCHHLDREIP 600

Query: 598 EDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGS 657
           ED+AFA SRIR +TIAAED+L+D+GAISIISSDSQAMGR+GEVISRTWQTA KMK+Q G 
Sbjct: 601 EDLAFAHSRIRKKTIAAEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKMKAQTGP 660

Query: 658 FGPSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMV 717
               ++DNDN RIRRYIAKYTINPAIANGFSQ+VGSVEVGKLADLV+WKPSFFG KPEMV
Sbjct: 661 LKCDSSDNDNFRIRRYIAKYTINPAIANGFSQYVGSVEVGKLADLVMWKPSFFGTKPEMV 720

Query: 718 IKGGAIAWANMGDPNASIPTPEPV 741
           IKGG +AWA++GDPNASIPTPEPV
Sbjct: 721 IKGGMVAWADIGDPNASIPTPEPV 744

Canavalia ensiformis (taxid: 3823)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 5

>sp\|P0CS22\|UREA_CRYNJ Urease OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=URE1 PE=3 SV=1	Back alignment and function description

>sp\|P0CS23\|UREA_CRYNB Urease OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=URE1 PE=3 SV=1	Back alignment and function description

>sp\|Q6A3P9\|UREA_ASPFU Urease OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ure1 PE=2 SV=2	Back alignment and function description

>sp\|O13465\|UREA_CRYNH Urease OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=URE1 PE=3 SV=3	Back alignment and function description

>sp\|O00084\|UREA_SCHPO Urease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ure1 PE=1 SV=1	Back alignment and function description

>sp\|Q11VN3\|URE1_CYTH3 Urease subunit alpha OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ureC PE=3 SV=1	Back alignment and function description

>sp\|A9GP84\|URE1_SORC5 Urease subunit alpha OS=Sorangium cellulosum (strain So ce56) GN=ureC PE=3 SV=1	Back alignment and function description

>sp\|A6SZ07\|URE1_JANMA Urease subunit alpha OS=Janthinobacterium sp. (strain Marseille) GN=ureC PE=3 SV=1	Back alignment and function description

>sp\|Q07K73\|URE1_RHOP5 Urease subunit alpha OS=Rhodopseudomonas palustris (strain BisA53) GN=ureC PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		742
222143560		837	urease [Morus alba]	0.998	0.885	0.834	0.0
225425840		835	PREDICTED: urease [Vitis vinifera] gi\|29	0.995	0.885	0.834	0.0
224100045		837	predicted protein [Populus trichocarpa]	0.997	0.884	0.832	0.0
147782176		829	hypothetical protein VITISV_017129 [Viti	0.991	0.887	0.832	0.0
345421697		838	urease [Cajanus cajan]	0.997	0.883	0.820	0.0
351722261		837	urease [Glycine max] gi\|14599161\|emb\|CAC	0.997	0.884	0.823	0.0
255547806		842	Urease, putative [Ricinus communis] gi\|2	0.998	0.880	0.806	0.0
351724331		838	embryo-specific urease [Glycine max] gi\|	0.998	0.884	0.809	0.0
297838495		837	hypothetical protein ARALYDRAFT_894502 [	0.998	0.885	0.794	0.0
357463059		836	Urease [Medicago truncatula] gi\|35549085	0.995	0.883	0.797	0.0

>gi\|222143560\|dbj\|BAH19309.1\| urease [Morus alba]	Back alignment and taxonomy information

 Score = 1283 bits (3319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/741 (83%), Positives = 675/741 (91%)

Query: 1   MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDI 60
           MKLTPRE EKL LHNAG+LAQKRLARGLRLNYTEAVALIATQ LEFVRDGDKTVAELMDI
Sbjct: 1   MKLTPREIEKLDLHNAGFLAQKRLARGLRLNYTEAVALIATQILEFVRDGDKTVAELMDI 60

Query: 61  GKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPA 120
           G+Q+LGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHD I+SE GNLELAL  SFLPVP+
Sbjct: 61  GRQLLGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDAISSEEGNLELALRCSFLPVPS 120

Query: 121 MDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLV 180
            +KF   ED+  PG II   G ITLN  R+AV+LKV+NTGDRPVQ+GSHYHFIEVNP LV
Sbjct: 121 SEKFTRTEDDVHPGEIIFRSGDITLNPYRRAVVLKVINTGDRPVQIGSHYHFIEVNPSLV 180

Query: 181 FDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAM 240
           FDR+KA+GMRLNI AGTATRFEPGE+K VKL+SIGG++VIRGGN IVDGP DDA     +
Sbjct: 181 FDRKKAYGMRLNIPAGTATRFEPGENKSVKLVSIGGKRVIRGGNAIVDGPVDDAKWEEVL 240

Query: 241 EAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIE 300
           EA+  R FGN+EE N S G+ GE+   T VISREAYAN+YGPTTGDKI+LGDT LY EIE
Sbjct: 241 EALSARGFGNKEEENASEGITGENLDFTAVISREAYANIYGPTTGDKIRLGDTNLYTEIE 300

Query: 301 SDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGL 360
            DF+VYGDECVFGGGKV+R+GMGQACG+    +LDTVITNAVIID++GIFKADIGI++GL
Sbjct: 301 RDFAVYGDECVFGGGKVLRDGMGQACGYPPDGALDTVITNAVIIDYSGIFKADIGIRDGL 360

Query: 361 IVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASG 420
           IV+LGKAGNPDIM+ V  NMIIG NTEVIAGE  I+TAGAIDCHVHFICPQLA++AIASG
Sbjct: 361 IVSLGKAGNPDIMDGVFSNMIIGVNTEVIAGEGKIITAGAIDCHVHFICPQLAYEAIASG 420

Query: 421 ITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIK 480
           ITTLVGGGTGPA+GTRATTCTPAPS MKLMLQSTDDLPLNFGFTGKGNS+ PDELHEIIK
Sbjct: 421 ITTLVGGGTGPAEGTRATTCTPAPSHMKLMLQSTDDLPLNFGFTGKGNSSTPDELHEIIK 480

Query: 481 AGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHT 540
           AGAMGLKLHEDWG+TPAAIDNCL VAE +D+QVNIHTDT+NESGFVE+TIAAFKGRTIH 
Sbjct: 481 AGAMGLKLHEDWGTTPAAIDNCLAVAELHDVQVNIHTDTVNESGFVENTIAAFKGRTIHA 540

Query: 541 YHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDV 600
           YHSEGAGGGHAPDII+VCGVKNVLPSSTNPTRP+TSNTIDEHLDMLMVCHHL K+IPEDV
Sbjct: 541 YHSEGAGGGHAPDIIRVCGVKNVLPSSTNPTRPFTSNTIDEHLDMLMVCHHLDKNIPEDV 600

Query: 601 AFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGSFGP 660
            FA+SRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVI+RTWQTAHKMKSQRGS  P
Sbjct: 601 KFADSRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVIARTWQTAHKMKSQRGSIDP 660

Query: 661 SAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKG 720
           + ++NDNLRI+RY+AKYTINPAIANG SQ+VGSVEVGKLADLVLWKPSFFGAKPEM+IKG
Sbjct: 661 NGSNNDNLRIKRYVAKYTINPAIANGISQYVGSVEVGKLADLVLWKPSFFGAKPEMIIKG 720

Query: 721 GAIAWANMGDPNASIPTPEPV 741
           G IAWANMGDPNASIPTPEPV
Sbjct: 721 GVIAWANMGDPNASIPTPEPV 741

Source: Morus alba

Species: Morus alba

Genus: Morus

Family: Moraceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225425840\|ref\|XP_002266856.1\| PREDICTED: urease [Vitis vinifera] gi\|297738376\|emb\|CBI27577.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224100045\|ref\|XP_002311723.1\| predicted protein [Populus trichocarpa] gi\|222851543\|gb\|EEE89090.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147782176\|emb\|CAN63192.1\| hypothetical protein VITISV_017129 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|345421697\|gb\|AEN84301.1\| urease [Cajanus cajan]	Back alignment and taxonomy information

>gi\|351722261\|ref\|NP_001236214.1\| urease [Glycine max] gi\|14599161\|emb\|CAC43845.1\| urease [Glycine max] gi\|32170831\|gb\|AAO85883.1\| leaf ubiquitous urease [Glycine max]	Back alignment and taxonomy information

>gi\|255547806\|ref\|XP_002514960.1\| Urease, putative [Ricinus communis] gi\|223546011\|gb\|EEF47514.1\| Urease, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|351724331\|ref\|NP_001236798.1\| embryo-specific urease [Glycine max] gi\|32170829\|gb\|AAO85884.1\| embryo-specific urease [Glycine max]	Back alignment and taxonomy information

>gi\|297838495\|ref\|XP_002887129.1\| hypothetical protein ARALYDRAFT_894502 [Arabidopsis lyrata subsp. lyrata] gi\|297332970\|gb\|EFH63388.1\| hypothetical protein ARALYDRAFT_894502 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|357463059\|ref\|XP_003601811.1\| Urease [Medicago truncatula] gi\|355490859\|gb\|AES72062.1\| Urease [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		742
TAIR\|locus:2008798		838	URE "urease" [Arabidopsis thal	0.998	0.884	0.793	0.0
ASPGD\|ASPL0000059350		836	ureB [Emericella nidulans (tax	0.989	0.877	0.621	3.9e-250
UNIPROTKB\|G4MYL6		835	MGG_01324 "Urease" [Magnaporth	0.991	0.881	0.603	1.6e-244
POMBASE\|SPAC1952.11c		835	ure2 "urease Ure2" [Schizosacc	0.991	0.881	0.606	5.2e-239
TIGR_CMR\|SPO_1714		569	SPO_1714 "urease, alpha subuni	0.637	0.831	0.665	3.2e-175
UNIPROTKB\|P0A660		577	ureC "Urease subunit alpha" [M	0.634	0.816	0.652	3.6e-169
UNIPROTKB\|P0A676		100	ureA "Urease subunit gamma" [M	0.134	1.0	0.594	1.8e-24
TIGR_CMR\|SPO_1713		101	SPO_1713 "urease, beta subunit	0.132	0.970	0.602	3.9e-24
TIGR_CMR\|SPO_1712		100	SPO_1712 "urease, gamma subuni	0.133	0.99	0.47	5.6e-19
UNIPROTKB\|P0A662		104	ureB "Urease subunit beta" [My	0.122	0.875	0.478	4.8e-17

TAIR\|locus:2008798 URE "urease" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3095 (1094.6 bits), Expect = 0., P = 0.
 Identities = 589/742 (79%), Positives = 654/742 (88%)

Query:     1 MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDI 60
             MKL PRE EKL LH AG+LAQKRLARG+RLNYTEAVALIATQ LEF+RDGDK+VAELMDI
Sbjct:     1 MKLLPREIEKLELHQAGFLAQKRLARGIRLNYTEAVALIATQILEFIRDGDKSVAELMDI 60

Query:    61 GKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPA 120
             G+Q+LGRRQVLPAV HLL TVQVEGTF DGTKL+T+H+PI+ ENGNLELALHGSFLPVP+
Sbjct:    61 GRQLLGRRQVLPAVLHLLYTVQVEGTFRDGTKLVTVHEPISLENGNLELALHGSFLPVPS 120

Query:   121 MDKFPGIEDNNV-PGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYL 179
             +DKFP + +  + PG +  G GSI +NHGRKAV+LKVVNTGDRPVQVGSHYHFIEVNP L
Sbjct:   121 LDKFPEVHEGVIIPGDMKYGDGSIIINHGRKAVVLKVVNTGDRPVQVGSHYHFIEVNPLL 180

Query:   180 VFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAA 239
             VFDRRKA GMRLNI AGTA RFEPGE K V L++IGG KVIRGGNGIVDG  DD   +  
Sbjct:   181 VFDRRKALGMRLNIPAGTAVRFEPGERKSVVLVNIGGNKVIRGGNGIVDGLVDDVNWTVL 240

Query:   240 MEAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEI 299
             ME ++ R F + E+ + S G+AGED   TT+ISRE YANMYGPTTGDK++LGDT LYA I
Sbjct:   241 METMERRGFKHLEDIDASEGIAGEDPRFTTMISREKYANMYGPTTGDKLRLGDTNLYARI 300

Query:   300 ESDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNG 359
             E D++VYGDECVFGGGKV+REGMGQ      A SLDTVITN+VIID++GI+KADIGIKNG
Sbjct:   301 EKDYTVYGDECVFGGGKVLREGMGQGIEQAEALSLDTVITNSVIIDYSGIYKADIGIKNG 360

Query:   360 LIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIAS 419
              IV +GKAGNPD M+ V  NM+IG  TEVIAGE  IVTAGAIDCHVHFICPQL ++A++S
Sbjct:   361 HIVGIGKAGNPDTMHGVQNNMLIGNKTEVIAGEGMIVTAGAIDCHVHFICPQLVYEAVSS 420

Query:   420 GITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEII 479
             GITT+VGGGTGPA GTRATTCTP+P  MKLMLQSTD LPLNFGFTGKGN+AKP EL  I+
Sbjct:   421 GITTMVGGGTGPAYGTRATTCTPSPFDMKLMLQSTDSLPLNFGFTGKGNTAKPLELRHIV 480

Query:   480 KAGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIH 539
             +AGAMGLKLHEDWG+TPAAIDNCL VAEEYDIQVNIHTDTLNESGFVEHTI AF+GRTIH
Sbjct:   481 EAGAMGLKLHEDWGTTPAAIDNCLAVAEEYDIQVNIHTDTLNESGFVEHTINAFRGRTIH 540

Query:   540 TYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPED 599
             TYHSEGAGGGHAPDII+VCGVKNVLPSSTNPTRPYT NT+DEHLDMLMVCHHL K+IPED
Sbjct:   541 TYHSEGAGGGHAPDIIRVCGVKNVLPSSTNPTRPYTKNTVDEHLDMLMVCHHLDKNIPED 600

Query:   600 VAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGSFG 659
             VAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTA KMK+QRG+  
Sbjct:   601 VAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKAQRGAID 660

Query:   660 PSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIK 719
             P+ AD+DN RI+RYIAKYTINPAIANGF+  +GSVEV KLADLV+W+P+FFGAKPEM+IK
Sbjct:   661 PNMADDDNSRIKRYIAKYTINPAIANGFADLIGSVEVKKLADLVIWQPAFFGAKPEMIIK 720

Query:   720 GGAIAWANMGDPNASIPTPEPV 741
             GG IAWANMGD NASIPTPEPV
Sbjct:   721 GGNIAWANMGDANASIPTPEPV 742

GO:0005737 "cytoplasm" evidence=ISM

GO:0006807 "nitrogen compound metabolic process" evidence=IEA;IDA

GO:0009039 "urease activity" evidence=IEA;ISS;IDA

GO:0016151 "nickel cation binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA

GO:0019627 "urea metabolic process" evidence=IEA

ASPGD\|ASPL0000059350 ureB [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4MYL6 MGG_01324 "Urease" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

POMBASE\|SPAC1952.11c ure2 "urease Ure2" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_1714 SPO_1714 "urease, alpha subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

UNIPROTKB\|P0A660 ureC "Urease subunit alpha" [Mycobacterium tuberculosis (taxid:1773)]	Back alignment and assigned GO terms

UNIPROTKB\|P0A676 ureA "Urease subunit gamma" [Mycobacterium tuberculosis (taxid:1773)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_1713 SPO_1713 "urease, beta subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_1712 SPO_1712 "urease, gamma subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

UNIPROTKB\|P0A662 ureB "Urease subunit beta" [Mycobacterium tuberculosis (taxid:1773)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q89UG0	URE1_BRAJA	3, ., 5, ., 1, ., 5	0.6827	0.6374	0.8269	yes	no
A7HHN1	URE1_ANADF	3, ., 5, ., 1, ., 5	0.6863	0.6401	0.8318	yes	no
B8EPU9	URE1_METSB	3, ., 5, ., 1, ., 5	0.6631	0.6374	0.8298	yes	no
Q2IZ49	URE1_RHOP2	3, ., 5, ., 1, ., 5	0.6652	0.6374	0.8298	yes	no
C4LF63	URE1_TOLAT	3, ., 5, ., 1, ., 5	0.7067	0.6320	0.8271	yes	no
Q6N3N3	URE1_RHOPA	3, ., 5, ., 1, ., 5	0.6715	0.6374	0.8298	yes	no
O00084	UREA_SCHPO	3, ., 5, ., 1, ., 5	0.6067	0.9919	0.8814	yes	no
A9GP84	URE1_SORC5	3, ., 5, ., 1, ., 5	0.6983	0.6388	0.8301	yes	no
Q1MCV9	URE1_RHIL3	3, ., 5, ., 1, ., 5	0.6900	0.6320	0.8228	yes	no
B4UFU2	URE1_ANASK	3, ., 5, ., 1, ., 5	0.6863	0.6401	0.8318	yes	no
A6UC35	URE1_SINMW	3, ., 5, ., 1, ., 5	0.6772	0.6320	0.8228	yes	no
B9JR81	URE1_AGRVS	3, ., 5, ., 1, ., 5	0.6687	0.6320	0.8228	yes	no
Q98CY9	URE1_RHILO	3, ., 5, ., 1, ., 5	0.6800	0.6320	0.8228	yes	no
Q8YQZ0	URE1_NOSS1	3, ., 5, ., 1, ., 5	0.7027	0.6307	0.8239	yes	no
Q133L6	URE1_RHOPS	3, ., 5, ., 1, ., 5	0.6694	0.6374	0.8298	yes	no
P07374	UREA_CANEN	3, ., 5, ., 1, ., 5	0.7809	0.9986	0.8821	N/A	no
Q11VN3	URE1_CYTH3	3, ., 5, ., 1, ., 5	0.7010	0.6388	0.8315	yes	no
Q117Z3	URE1_TRIEI	3, ., 5, ., 1, ., 5	0.6949	0.6320	0.8228	yes	no
Q87VP0	URE1_PSESM	3, ., 5, ., 1, ., 5	0.7055	0.6293	0.8250	yes	no
C3MGI5	URE1_RHISN	3, ., 5, ., 1, ., 5	0.6715	0.6374	0.8298	yes	no
B9J8M3	URE1_AGRRK	3, ., 5, ., 1, ., 5	0.6794	0.6307	0.8224	yes	no
Q07K73	URE1_RHOP5	3, ., 5, ., 1, ., 5	0.6842	0.6374	0.8298	yes	no
P0CS22	UREA_CRYNJ	3, ., 5, ., 1, ., 5	0.5954	0.9892	0.8811	yes	no
P0CS23	UREA_CRYNB	3, ., 5, ., 1, ., 5	0.5954	0.9892	0.8811	N/A	no
A8LRS0	URE1_DINSH	3, ., 5, ., 1, ., 5	0.6778	0.6374	0.8312	yes	no
A2S996	URE1_BURM9	3, ., 5, ., 1, ., 5	0.6989	0.6361	0.8309	yes	no
Q2SYF7	URE1_BURTA	3, ., 5, ., 1, ., 5	0.7027	0.6307	0.8297	yes	no
A1V1G6	URE1_BURMS	3, ., 5, ., 1, ., 5	0.6989	0.6361	0.8309	yes	no
P42885	URE1_RHIME	3, ., 5, ., 1, ., 5	0.6794	0.6320	0.8228	yes	no
Q2JQ88	URE1_SYNJB	3, ., 5, ., 1, ., 5	0.6785	0.6401	0.8304	yes	no
B3PXB3	URE1_RHIE6	3, ., 5, ., 1, ., 5	0.6878	0.6320	0.8228	yes	no
Q2K517	URE1_RHIEC	3, ., 5, ., 1, ., 5	0.6878	0.6320	0.8228	yes	no
Q48DE6	URE1_PSE14	3, ., 5, ., 1, ., 5	0.7027	0.6307	0.8268	yes	no
Q11EW4	URE1_MESSB	3, ., 5, ., 1, ., 5	0.6942	0.6320	0.8228	yes	no
Q8UCT2	URE1_AGRT5	3, ., 5, ., 1, ., 5	0.6815	0.6307	0.8224	yes	no
B5ZMP0	URE1_RHILW	3, ., 5, ., 1, ., 5	0.6878	0.6320	0.8228	yes	no
A0L6F2	URE1_MAGSM	3, ., 5, ., 1, ., 5	0.6757	0.6374	0.8312	yes	no
Q210F9	URE1_RHOPB	3, ., 5, ., 1, ., 5	0.6673	0.6374	0.8298	yes	no
Q5LSQ2	URE1_RUEPO	3, ., 5, ., 1, ., 5	0.6652	0.6374	0.8312	yes	no
P73061	URE1_SYNY3	3, ., 5, ., 1, ., 5	0.7027	0.6320	0.8242	N/A	no
O13465	UREA_CRYNH	3, ., 5, ., 1, ., 5	0.5900	0.9892	0.8811	N/A	no
Q6A3P9	UREA_ASPFU	3, ., 5, ., 1, ., 5	0.6096	0.9946	0.8806	yes	no
A6SZ07	URE1_JANMA	3, ., 5, ., 1, ., 5	0.6942	0.6307	0.8268	yes	no
B4RSX9	URE1_ALTMD	3, ., 5, ., 1, ., 5	0.6772	0.6307	0.8253	yes	no
B3QGK1	URE1_RHOPT	3, ., 5, ., 1, ., 5	0.6694	0.6374	0.8298	yes	no
Q4KJ10	URE1_PSEF5	3, ., 5, ., 1, ., 5	0.7048	0.6307	0.8268	yes	no
Q4ZN06	URE12_PSEU2	3, ., 5, ., 1, ., 5	0.7048	0.6307	0.8268	yes	no
Q62HS0	URE1_BURMA	3, ., 5, ., 1, ., 5	0.6989	0.6361	0.8309	yes	no
C5BUN9	URE1_TERTT	3, ., 5, ., 1, ., 5	0.6985	0.6307	0.8253	yes	no
B0JKA1	URE1_MICAN	3, ., 5, ., 1, ., 5	0.6985	0.6320	0.8242	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1	0.976
3rd Layer	3.5.1.5	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		742
PLN02303		837	PLN02303, PLN02303, urease	0.0
PRK13207		568	PRK13207, ureC, urease subunit alpha; Reviewed	0.0
cd00375		567	cd00375, Urease_alpha, Urease alpha-subunit; Ureas	0.0
COG0804		568	COG0804, UreC, Urea amidohydrolase (urease) alpha	0.0
TIGR01792		567	TIGR01792, urease_alph, urease, alpha subunit	0.0
PRK13206		573	PRK13206, ureC, urease subunit alpha; Reviewed	0.0
PRK13308		569	PRK13308, ureC, urease subunit alpha; Reviewed	0.0
PRK13985		568	PRK13985, ureB, urease subunit beta; Provisional	0.0
PRK13309		572	PRK13309, ureC, urease subunit alpha; Reviewed	0.0
PRK13192		208	PRK13192, PRK13192, bifunctional urease subunit ga	1e-103
pfam00449		121	pfam00449, Urease_alpha, Urease alpha-subunit, N-t	5e-74
PRK13986		225	PRK13986, PRK13986, urease subunit alpha; Provisio	4e-73
pfam01979		307	pfam01979, Amidohydro_1, Amidohydrolase family	6e-60
pfam00699		100	pfam00699, Urease_beta, Urease beta subunit	3e-57
pfam00547		99	pfam00547, Urease_gamma, Urease, gamma subunit	6e-57
cd00407		101	cd00407, Urease_beta, Urease beta-subunit; Urease	3e-55
cd00390		96	cd00390, Urease_gamma, Urease gamma-subunit; Ureas	4e-52
COG0832		106	COG0832, UreB, Urea amidohydrolase (urease) beta s	6e-50
PRK13203		102	PRK13203, ureB, urease subunit beta; Reviewed	1e-46
COG0831		100	COG0831, UreA, Urea amidohydrolase (urease) gamma	5e-45
PRK13241		100	PRK13241, ureA, urease subunit gamma; Provisional	1e-44
TIGR00192		101	TIGR00192, urease_beta, urease, beta subunit	5e-41
TIGR00193		102	TIGR00193, urease_gam, urease, gamma subunit	9e-36
PRK13201		136	PRK13201, ureB, urease subunit beta; Reviewed	2e-31
PRK13205		162	PRK13205, ureB, urease subunit beta; Reviewed	4e-30
PRK13198		158	PRK13198, ureB, urease subunit beta; Reviewed	2e-28
PRK13204		159	PRK13204, ureB, urease subunit beta; Reviewed	6e-28
PRK13242		100	PRK13242, ureA, urease subunit gamma; Provisional	2e-21
PRK13202		104	PRK13202, ureB, urease subunit beta; Reviewed	1e-20
COG0044		430	COG0044, PyrC, Dihydroorotase and related cyclic a	5e-12
PRK06189		451	PRK06189, PRK06189, allantoinase; Provisional	9e-11
cd01315		447	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and A	9e-11
TIGR03178		443	TIGR03178, allantoinase, allantoinase	8e-09
cd01314		447	cd01314, D-HYD, D-hydantoinases (D-HYD) also calle	4e-08
PRK08323		459	PRK08323, PRK08323, phenylhydantoinase; Validated	2e-07
cd01297		415	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D	2e-07
PRK10657		388	PRK10657, PRK10657, isoaspartyl dipeptidase; Provi	6e-07
PRK13404		477	PRK13404, PRK13404, dihydropyrimidinase; Provision	1e-06
COG1228		406	COG1228, HutI, Imidazolonepropionase and related a	3e-06
cd01309		359	cd01309, Met_dep_hydrolase_C, Metallo-dependent hy	3e-06
PRK09060		444	PRK09060, PRK09060, dihydroorotase; Validated	3e-06
pfam13594		66	pfam13594, Amidohydro_5, Amidohydrolase	2e-05
cd01308		387	cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipe	2e-05
COG3653		579	COG3653, COG3653, N-acyl-D-aspartate/D-glutamate d	5e-05
PRK09237		380	PRK09237, PRK09237, dihydroorotase; Provisional	6e-05
PRK09236		444	PRK09236, PRK09236, dihydroorotase; Reviewed	1e-04
PRK09356		406	PRK09356, PRK09356, imidazolonepropionase; Validat	2e-04
TIGR01975		389	TIGR01975, isoAsp_dipep, isoaspartyl dipeptidase I	3e-04
PRK09356		406	PRK09356, PRK09356, imidazolonepropionase; Validat	6e-04
COG1001		584	COG1001, AdeC, Adenine deaminase [Nucleotide trans	7e-04
COG3964		386	COG3964, COG3964, Predicted amidohydrolase [Genera	8e-04
cd01296		371	cd01296, Imidazolone-5PH, Imidazolonepropionase/im	9e-04
PRK02382		443	PRK02382, PRK02382, dihydroorotase; Provisional	0.001
PRK09357		423	PRK09357, pyrC, dihydroorotase; Validated	0.002
PRK08044		449	PRK08044, PRK08044, allantoinase; Provisional	0.002
TIGR00857		411	TIGR00857, pyrC_multi, dihydroorotase, multifuncti	0.002
cd01307		338	cd01307, Met_dep_hydrolase_B, Metallo-dependent hy	0.003
TIGR01178		552	TIGR01178, ade, adenine deaminase	0.003
TIGR03583		365	TIGR03583, EF_0837, probable amidohydrolase EF_083	0.003
COG1574		535	COG1574, COG1574, Predicted metal-dependent hydrol	0.003
PRK12394		379	PRK12394, PRK12394, putative metallo-dependent hyd	0.004

>gnl\|CDD\|215172 PLN02303, PLN02303, urease	Back alignment and domain information

 Score = 1494 bits (3869), Expect = 0.0
 Identities = 619/741 (83%), Positives = 666/741 (89%)

Query: 1   MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDI 60
           MKL+PRE +KL LH AG+LAQKRLARGLRLNYTEAVALIATQ LEF+RDGDK+VAELMD+
Sbjct: 1   MKLSPREIDKLLLHQAGFLAQKRLARGLRLNYTEAVALIATQILEFIRDGDKSVAELMDL 60

Query: 61  GKQILGRRQVLPAVPHLLDTVQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPA 120
           GKQ+LGRRQVLPAVPHLL TVQVEGTFPDGTKL+T+HDPI+SE+GNLELALHGSFLPVP+
Sbjct: 61  GKQLLGRRQVLPAVPHLLHTVQVEGTFPDGTKLVTVHDPISSEDGNLELALHGSFLPVPS 120

Query: 121 MDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTGDRPVQVGSHYHFIEVNPYLV 180
           +DKFP  E+  +PG II G GSI +N GRKAV LKV NTGDRP+QVGSHYHFIE NPYLV
Sbjct: 121 LDKFPEDEEEPIPGEIITGDGSIIINAGRKAVKLKVTNTGDRPIQVGSHYHFIETNPYLV 180

Query: 181 FDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAM 240
           FDRRKA+GMRLNI AGTA RFEPGE+K V L+SIGG KVIRGGNGIVDGP DD+  +  M
Sbjct: 181 FDRRKAYGMRLNIPAGTAVRFEPGETKTVTLVSIGGNKVIRGGNGIVDGPVDDSRLTKIM 240

Query: 241 EAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIE 300
           E V  R FG+ EE + S GV GED   TT ISRE YANMYGPTTGDKI+LGDT LYAEIE
Sbjct: 241 ERVSSRGFGHVEEDDASEGVIGEDPDFTTTISREKYANMYGPTTGDKIRLGDTNLYAEIE 300

Query: 301 SDFSVYGDECVFGGGKVIREGMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGL 360
            DF+VYGDEC FGGGKV+R+GMGQA G+  A SLDTVITNAVIID+TGI+KADIGIK+GL
Sbjct: 301 KDFTVYGDECKFGGGKVLRDGMGQATGYGAADSLDTVITNAVIIDYTGIYKADIGIKDGL 360

Query: 361 IVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGAIDCHVHFICPQLAHDAIASG 420
           IV +GKAGNPD+M+ V  NMI+G NTEVIAGE  IVTAG IDCHVHFICPQLA +AIASG
Sbjct: 361 IVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICPQLATEAIASG 420

Query: 421 ITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIK 480
           ITTLVGGGTGPA GT ATTCTPAPS MKLMLQSTDDLPLNFGFTGKGN+AKP+ LHEIIK
Sbjct: 421 ITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTDDLPLNFGFTGKGNTAKPEGLHEIIK 480

Query: 481 AGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHT 540
           AGAMGLKLHEDWG+TPAAIDNCL VAEEYDIQV IHTDTLNESG VEH+IAAFKGRTIHT
Sbjct: 481 AGAMGLKLHEDWGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSIAAFKGRTIHT 540

Query: 541 YHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDV 600
           YHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYT NTIDEHLDMLMVCHHL K+IPEDV
Sbjct: 541 YHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTKNTIDEHLDMLMVCHHLDKNIPEDV 600

Query: 601 AFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKSQRGSFGP 660
           AFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVI+RTWQTAHKMKSQRG+  P
Sbjct: 601 AFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKMKSQRGALEP 660

Query: 661 SAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKG 720
             ADNDN RI+RYIAKYTINPAIA+G S FVGSVEVGKLADLVLWKP+FFGAKPEMVIKG
Sbjct: 661 RGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFGAKPEMVIKG 720

Query: 721 GAIAWANMGDPNASIPTPEPV 741
           G IAWA MGDPNASIPTPEPV
Sbjct: 721 GQIAWAQMGDPNASIPTPEPV 741

Length = 837

>gnl\|CDD\|237305 PRK13207, ureC, urease subunit alpha; Reviewed	Back alignment and domain information

>gnl\|CDD\|238221 cd00375, Urease_alpha, Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>gnl\|CDD\|223875 COG0804, UreC, Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|130852 TIGR01792, urease_alph, urease, alpha subunit	Back alignment and domain information

>gnl\|CDD\|237304 PRK13206, ureC, urease subunit alpha; Reviewed	Back alignment and domain information

>gnl\|CDD\|183965 PRK13308, ureC, urease subunit alpha; Reviewed	Back alignment and domain information

>gnl\|CDD\|184438 PRK13985, ureB, urease subunit beta; Provisional	Back alignment and domain information

>gnl\|CDD\|183966 PRK13309, ureC, urease subunit alpha; Reviewed	Back alignment and domain information

>gnl\|CDD\|183886 PRK13192, PRK13192, bifunctional urease subunit gamma/beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|201234 pfam00449, Urease_alpha, Urease alpha-subunit, N-terminal domain	Back alignment and domain information

>gnl\|CDD\|184439 PRK13986, PRK13986, urease subunit alpha; Provisional	Back alignment and domain information

>gnl\|CDD\|216825 pfam01979, Amidohydro_1, Amidohydrolase family	Back alignment and domain information

>gnl\|CDD\|201402 pfam00699, Urease_beta, Urease beta subunit	Back alignment and domain information

>gnl\|CDD\|201297 pfam00547, Urease_gamma, Urease, gamma subunit	Back alignment and domain information

>gnl\|CDD\|238238 cd00407, Urease_beta, Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>gnl\|CDD\|238229 cd00390, Urease_gamma, Urease gamma-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>gnl\|CDD\|223902 COG0832, UreB, Urea amidohydrolase (urease) beta subunit [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237303 PRK13203, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|223901 COG0831, UreA, Urea amidohydrolase (urease) gamma subunit [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|183913 PRK13241, ureA, urease subunit gamma; Provisional	Back alignment and domain information

>gnl\|CDD\|129296 TIGR00192, urease_beta, urease, beta subunit	Back alignment and domain information

>gnl\|CDD\|232866 TIGR00193, urease_gam, urease, gamma subunit	Back alignment and domain information

>gnl\|CDD\|237302 PRK13201, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|106174 PRK13205, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|171897 PRK13198, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|171902 PRK13204, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|139420 PRK13242, ureA, urease subunit gamma; Provisional	Back alignment and domain information

>gnl\|CDD\|106171 PRK13202, ureB, urease subunit beta; Reviewed	Back alignment and domain information

>gnl\|CDD\|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|235732 PRK06189, PRK06189, allantoinase; Provisional	Back alignment and domain information

>gnl\|CDD\|238640 cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)	Back alignment and domain information

>gnl\|CDD\|163175 TIGR03178, allantoinase, allantoinase	Back alignment and domain information

>gnl\|CDD\|238639 cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin	Back alignment and domain information

>gnl\|CDD\|236240 PRK08323, PRK08323, phenylhydantoinase; Validated	Back alignment and domain information

>gnl\|CDD\|238622 cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics	Back alignment and domain information

>gnl\|CDD\|182623 PRK10657, PRK10657, isoaspartyl dipeptidase; Provisional	Back alignment and domain information

>gnl\|CDD\|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional	Back alignment and domain information

>gnl\|CDD\|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|238634 cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>gnl\|CDD\|181632 PRK09060, PRK09060, dihydroorotase; Validated	Back alignment and domain information

>gnl\|CDD\|222250 pfam13594, Amidohydro_5, Amidohydrolase	Back alignment and domain information

>gnl\|CDD\|238633 cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid	Back alignment and domain information

>gnl\|CDD\|226179 COG3653, COG3653, N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|236423 PRK09237, PRK09237, dihydroorotase; Provisional	Back alignment and domain information

>gnl\|CDD\|181716 PRK09236, PRK09236, dihydroorotase; Reviewed	Back alignment and domain information

>gnl\|CDD\|236478 PRK09356, PRK09356, imidazolonepropionase; Validated	Back alignment and domain information

>gnl\|CDD\|131030 TIGR01975, isoAsp_dipep, isoaspartyl dipeptidase IadA	Back alignment and domain information

>gnl\|CDD\|236478 PRK09356, PRK09356, imidazolonepropionase; Validated	Back alignment and domain information

>gnl\|CDD\|223933 COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|226473 COG3964, COG3964, Predicted amidohydrolase [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate	Back alignment and domain information

>gnl\|CDD\|179417 PRK02382, PRK02382, dihydroorotase; Provisional	Back alignment and domain information

>gnl\|CDD\|236479 PRK09357, pyrC, dihydroorotase; Validated	Back alignment and domain information

>gnl\|CDD\|169193 PRK08044, PRK08044, allantoinase; Provisional	Back alignment and domain information

>gnl\|CDD\|233153 TIGR00857, pyrC_multi, dihydroorotase, multifunctional complex type	Back alignment and domain information

>gnl\|CDD\|238632 cd01307, Met_dep_hydrolase_B, Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>gnl\|CDD\|130246 TIGR01178, ade, adenine deaminase	Back alignment and domain information

>gnl\|CDD\|132622 TIGR03583, EF_0837, probable amidohydrolase EF_0837/AHA_3915	Back alignment and domain information

>gnl\|CDD\|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|183497 PRK12394, PRK12394, putative metallo-dependent hydrolase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		742
PLN02303		837	urease	100.0
COG0804		568	UreC Urea amidohydrolase (urease) alpha subunit [A	100.0
PRK13985		568	ureB urease subunit beta; Provisional	100.0
cd00375		567	Urease_alpha Urease alpha-subunit; Urease is a nic	100.0
PRK13308		569	ureC urease subunit alpha; Reviewed	100.0
PRK13206		573	ureC urease subunit alpha; Reviewed	100.0
TIGR01792		567	urease_alph urease, alpha subunit. This model desc	100.0
PRK13207		568	ureC urease subunit alpha; Reviewed	100.0
PRK13309		572	ureC urease subunit alpha; Reviewed	100.0
PRK13986		225	urease subunit alpha; Provisional	100.0
PRK13192		208	bifunctional urease subunit gamma/beta; Reviewed	100.0
PRK13203		102	ureB urease subunit beta; Reviewed	100.0
PRK13198		158	ureB urease subunit beta; Reviewed	100.0
PRK13204		159	ureB urease subunit beta; Reviewed	100.0
TIGR00192		101	urease_beta urease, beta subunit. In a number of s	100.0
COG0832		106	UreB Urea amidohydrolase (urease) beta subunit [Am	100.0
cd00407		101	Urease_beta Urease beta-subunit; Urease is a nicke	100.0
PF00699		100	Urease_beta: Urease beta subunit CAUTION: The Pros	100.0
PRK13202		104	ureB urease subunit beta; Reviewed	100.0
PRK13201		136	ureB urease subunit beta; Reviewed	100.0
COG0831		100	UreA Urea amidohydrolase (urease) gamma subunit [A	100.0
TIGR00193		102	urease_gam urease, gamma subunit. Nomenclature for	100.0
PRK13205		162	ureB urease subunit beta; Reviewed	100.0
PRK13242		100	ureA urease subunit gamma; Provisional	100.0
PRK13241		100	ureA urease subunit gamma; Provisional	100.0
PF00547		99	Urease_gamma: Urease, gamma subunit enzyme!; Inter	100.0
cd00390		96	Urease_gamma Urease gamma-subunit; Urease is a nic	100.0
PF00449		121	Urease_alpha: Urease alpha-subunit, N-terminal dom	100.0
PRK07627		425	dihydroorotase; Provisional	99.97
cd01315		447	L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas	99.97
PRK06189		451	allantoinase; Provisional	99.97
PLN02942		486	dihydropyrimidinase	99.97
COG0044		430	PyrC Dihydroorotase and related cyclic amidohydrol	99.97
TIGR03178		443	allantoinase allantoinase. This enzyme carries out	99.97
TIGR02033		454	D-hydantoinase D-hydantoinase. This model represen	99.97
PLN02795		505	allantoinase	99.97
PRK13404		477	dihydropyrimidinase; Provisional	99.97
PRK08323		459	phenylhydantoinase; Validated	99.97
cd01314		447	D-HYD D-hydantoinases (D-HYD) also called dihydrop	99.97
PRK09357		423	pyrC dihydroorotase; Validated	99.97
PRK09059		429	dihydroorotase; Validated	99.96
cd01297		415	D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci	99.96
PRK08044		449	allantoinase; Provisional	99.96
PRK02382		443	dihydroorotase; Provisional	99.96
PRK09236		444	dihydroorotase; Reviewed	99.96
PRK07369		418	dihydroorotase; Provisional	99.95
PRK07575		438	dihydroorotase; Provisional	99.95
KOG2584		522	consensus Dihydroorotase and related enzymes [Nucl	99.95
PRK09060		444	dihydroorotase; Validated	99.95
PRK08417		386	dihydroorotase; Provisional	99.95
PRK06687		419	chlorohydrolase; Validated	99.95
PRK15446		383	phosphonate metabolism protein PhnM; Provisional	99.95
PRK09045		443	N-ethylammeline chlorohydrolase; Provisional	99.95
TIGR00857		411	pyrC_multi dihydroorotase, multifunctional complex	99.95
COG1574		535	Predicted metal-dependent hydrolase with the TIM-b	99.95
PRK07228		445	N-ethylammeline chlorohydrolase; Provisional	99.95
cd01298		411	ATZ_TRZ_like TRZ/ATZ family contains enzymes from	99.94
PRK08203		451	hydroxydechloroatrazine ethylaminohydrolase; Revie	99.94
PRK12394		379	putative metallo-dependent hydrolase; Provisional	99.94
PRK15493		435	5-methylthioadenosine/S-adenosylhomocysteine deami	99.94
PRK09061		509	D-glutamate deacylase; Validated	99.94
PRK08204		449	hypothetical protein; Provisional	99.94
COG1228		406	HutI Imidazolonepropionase and related amidohydrol	99.94
PRK06380		418	metal-dependent hydrolase; Provisional	99.94
COG1001		584	AdeC Adenine deaminase [Nucleotide transport and m	99.94
PRK09356		406	imidazolonepropionase; Validated	99.94
PRK01211		409	dihydroorotase; Provisional	99.94
TIGR02318		376	phosphono_phnM phosphonate metabolism protein PhnM	99.94
PRK12393		457	amidohydrolase; Provisional	99.93
PRK06151		488	N-ethylammeline chlorohydrolase; Provisional	99.93
PRK08393		424	N-ethylammeline chlorohydrolase; Provisional	99.93
PRK07213		375	chlorohydrolase; Provisional	99.93
TIGR01178		552	ade adenine deaminase. The family described by thi	99.93
PRK07203		442	putative chlorohydrolase/aminohydrolase; Validated	99.93
cd01293		398	Bact_CD Bacterial cytosine deaminase and related m	99.93
PRK06038		430	N-ethylammeline chlorohydrolase; Provisional	99.92
TIGR00221		380	nagA N-acetylglucosamine-6-phosphate deacetylase.	99.92
PRK09228		433	guanine deaminase; Provisional	99.92
PRK11170		382	nagA N-acetylglucosamine-6-phosphate deacetylase;	99.92
PRK04250		398	dihydroorotase; Provisional	99.92
PRK09237		380	dihydroorotase; Provisional	99.92
PRK05985		391	cytosine deaminase; Provisional	99.92
PRK00369		392	pyrC dihydroorotase; Provisional	99.91
PRK10657		388	isoaspartyl dipeptidase; Provisional	99.91
TIGR01975		389	isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i	99.91
COG1820		380	NagA N-acetylglucosamine-6-phosphate deacetylase [	99.91
TIGR01224		377	hutI imidazolonepropionase. This enzyme catalyzes	99.91
cd01303		429	GDEase Guanine deaminase (GDEase). Guanine deamina	99.91
PRK08418		408	chlorohydrolase; Provisional	99.9
PRK07572		426	cytosine deaminase; Validated	99.9
TIGR02967		401	guan_deamin guanine deaminase. This model describe	99.9
PRK07583		438	cytosine deaminase-like protein; Validated	99.9
TIGR03314		441	Se_ssnA putative selenium metabolism protein SsnA.	99.9
PRK14085		382	imidazolonepropionase; Provisional	99.9
cd01299		342	Met_dep_hydrolase_A Metallo-dependent hydrolases,	99.9
PRK09230		426	cytosine deaminase; Provisional	99.9
cd01296		371	Imidazolone-5PH Imidazolonepropionase/imidazolone-	99.89
cd01313		418	Met_dep_hydrolase_E Metallo-dependent hydrolases,	99.89
cd00854		374	NagA N-acetylglucosamine-6-phosphate deacetylase,	99.89
PRK10027		588	cryptic adenine deaminase; Provisional	99.89
TIGR02022		455	hutF formiminoglutamate deiminase. In some species	99.89
PRK09229		456	N-formimino-L-glutamate deiminase; Validated	99.89
cd01302		337	Cyclic_amidohydrolases Cyclic amidohydrolases, inc	99.88
COG0402		421	SsnA Cytosine deaminase and related metal-dependen	99.88
TIGR03583		365	EF_0837 probable amidohydrolase EF_0837/AHA_3915.	99.87
PRK06846		410	putative deaminase; Validated	99.87
cd01308		387	Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy	99.87
cd01312		381	Met_dep_hydrolase_D Metallo-dependent hydrolases,	99.87
cd01309		359	Met_dep_hydrolase_C Metallo-dependent hydrolases,	99.87
cd01317		374	DHOase_IIa Dihydroorotase (DHOase), subgroup IIa;	99.86
cd01318		361	DHOase_IIb Dihydroorotase (DHOase), subgroup IIb;	99.86
TIGR03121		556	one_C_dehyd_A formylmethanofuran dehydrogenase sub	99.85
cd01304		541	FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub	99.84
cd01307		338	Met_dep_hydrolase_B Metallo-dependent hydrolases,	99.83
COG3964		386	Predicted amidohydrolase [General function predict	99.83
cd01295		422	AdeC Adenine deaminase (AdeC) directly deaminates	99.82
cd01300		479	YtcJ_like YtcJ_like metal dependent amidohydrolase	99.82
KOG3968		439	consensus Atrazine chlorohydrolase/guanine deamina	99.8
COG3454		377	Metal-dependent hydrolase involved in phosphonate	99.78
COG3653		579	N-acyl-D-aspartate/D-glutamate deacylase [Secondar	99.77
cd01316		344	CAD_DHOase The eukaryotic CAD protein is a trifunc	99.71
COG1229		575	FwdA Formylmethanofuran dehydrogenase subunit A [E	99.67
KOG3892		407	consensus N-acetyl-glucosamine-6-phosphate deacety	99.63
cd01294		335	DHOase Dihydroorotase (DHOase) catalyzes the rever	99.61
PF01979		333	Amidohydro_1: Amidohydrolase family; InterPro: IPR	99.53
cd01306		325	PhnM PhnM is believed to be a subunit of the membr	99.51
PF07969		404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	99.5
PF13147		304	Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2	99.42
PRK05451		345	dihydroorotase; Provisional	99.37
TIGR00856		341	pyrC_dimer dihydroorotase, homodimeric type. This	99.21
cd01305		263	archeal_chlorohydrolases Predicted chlorohydrolase	99.2
cd01292		275	metallo-dependent_hydrolases Superfamily of metall	99.14
PF13594		68	Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1	99.07
PLN02599		364	dihydroorotase	99.07
PRK06886		329	hypothetical protein; Validated	98.61
TIGR01430		324	aden_deam adenosine deaminase. This family include	97.87
cd01310		251	TatD_DNAse TatD like proteins; E.coli TatD is a cy	97.72
TIGR00010		252	hydrolase, TatD family. Several genomes have multi	97.61
cd01320		325	ADA Adenosine deaminase (ADA) is a monomeric zinc	97.54
PRK10812		265	putative DNAse; Provisional	97.34
PRK11449		258	putative deoxyribonuclease YjjV; Provisional	97.21
PRK10425		258	DNase TatD; Provisional	97.16
COG0084		256	TatD Mg-dependent DNase [DNA replication, recombin	97.15
PRK09358		340	adenosine deaminase; Provisional	96.98
COG1099		254	Predicted metal-dependent hydrolases with the TIM-	96.56
PF01026		255	TatD_DNase: TatD related DNase The Pfam entry find	96.11
cd00530		293	PTE Phosphotriesterase (PTE) catalyzes the hydroly	96.02
PF12890		142	DHOase: Dihydro-orotase-like; InterPro: IPR024403	93.92
COG0418		344	PyrC Dihydroorotase [Nucleotide transport and meta	93.81
cd01311		263	PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC)	92.03
PRK09875		292	putative hydrolase; Provisional	91.7
cd00443		305	ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin	91.66
KOG2902		344	consensus Dihydroorotase [Nucleotide transport and	89.64
cd01321		345	ADGF Adenosine deaminase-related growth factors (A	88.73
PTZ00124		362	adenosine deaminase; Provisional	84.64
PF00962		331	A_deaminase: Adenosine/AMP deaminase immunodeficie	81.61

>PLN02303 urease	Back alignment and domain information

Probab=100.00  E-value=2.5e-220  Score=1872.49  Aligned_cols=742  Identities=83%  Similarity=1.292  Sum_probs=715.0

Q ss_pred             CCCCccchhhhhHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHhhcCCCCHHHHHHHccccccCCCcCCChhhcccc
Q 004611            1 MKLTPREAEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQTLEFVRDGDKTVAELMDIGKQILGRRQVLPAVPHLLDT   80 (742)
Q Consensus         1 m~~~~~~~~~l~~~~~~~~a~~~~~~g~~l~~~e~~a~~~~~~~e~~r~g~~~~~~~~~~~~~~l~~~~v~~~v~~~~~~   80 (742)
                      |||||||+|||+||+||+|||||++||||||||||+||||++|||+||||++||+|||++|+++|++||||||||+||++
T Consensus         1 m~l~p~e~~kl~~~~a~~la~~r~~rg~~ln~pea~ali~~~~~e~ar~g~~~v~~lm~~g~~~l~~~~v~~gv~~~~~~   80 (837)
T PLN02303          1 MKLSPREIDKLLLHQAGFLAQKRLARGLRLNYTEAVALIATQILEFIRDGDKSVAELMDLGKQLLGRRQVLPAVPHLLHT   80 (837)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhhCCHhhcccChHhhhce
Confidence            99999999999999999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             eeeeeecCCCceeEEeecCccCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCeeEeCCCceeeCCCCceEEEEEEeCC
Q 004611           81 VQVEGTFPDGTKLITIHDPIASENGNLELALHGSFLPVPAMDKFPGIEDNNVPGRIIPGGGSITLNHGRKAVILKVVNTG  160 (742)
Q Consensus        81 ~~ve~~f~~g~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~v~n~~  160 (742)
                      ||||+||||||||||||+||++++|+|++||||||||+|+.+.||.....|+||||++++++|+||+||++++|+|+|+|
T Consensus        81 vqve~tf~dgtklvtvh~pi~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~pg~~~~~~~~i~~n~gr~~~~l~v~n~g  160 (837)
T PLN02303         81 VQVEGTFPDGTKLVTVHDPISSEDGNLELALHGSFLPVPSLDKFPEDEEEPIPGEIITGDGSIIINAGRKAVKLKVTNTG  160 (837)
T ss_pred             eeEEEEcCCCCEEEEecCCCCCCCCCHhHhhcCCcCCCCchhhccccccCCCCceEecCCCCeeeCCCCCeEEEEEeeCC
Confidence            99999999999999999999999999999999999999999999987777999999999999999999999999999999


Q ss_pred             CcceeecccccccccCCccccccccccccccccCCCceeEeCCCCeeEEEEEEecCceEEeccCCccCCCCCcccHHHHH
Q 004611          161 DRPVQVGSHYHFIEVNPYLVFDRRKAFGMRLNIAAGTATRFEPGESKIVKLISIGGRKVIRGGNGIVDGPTDDAGCSAAM  240 (742)
Q Consensus       161 dr~~qvgsh~h~~e~n~~l~f~r~~~~g~~l~i~~g~~~rfepg~~~~v~l~~~~g~~~~~g~~~~~~~~~~~~~~~~~~  240 (742)
                      ||||||||||||||||+||+|||++|||||||||||||||||||++|+|+||+|||.|+|+|||||++|+++..++++++
T Consensus       161 drpiqvgSH~hf~e~N~aL~FdR~~a~G~rLdipaGtavRfePG~~~~V~lv~~~G~r~v~G~~~~~~g~~~~~~~~~~~  240 (837)
T PLN02303        161 DRPIQVGSHYHFIETNPYLVFDRRKAYGMRLNIPAGTAVRFEPGETKTVTLVSIGGNKVIRGGNGIVDGPVDDSRLTKIM  240 (837)
T ss_pred             CCceEeccccchHhcCchhhccHHHhcCccccCCCCCeEeECCCCeeEEEEEEccCceEEeccCcccCCcCCchhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHhcCCCCCcccccccccCCCCCcccccCHHHHHhhhCCCCCCcccccCcccEEEEeccccccccccccCCCccccc
Q 004611          241 EAVKLRQFGNQEEANTSVGVAGEDRYLTTVISREAYANMYGPTTGDKIQLGDTELYAEIESDFSVYGDECVFGGGKVIRE  320 (742)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~g~e~~~g~gk~~r~  320 (742)
                      +|++++||.|.++..........++..+++|||++||+|||||+||+|||+||+||+|||||||.|||||+|||||++||
T Consensus       241 ~~~~~~gf~~~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~gpt~gd~vrl~dt~l~~~ve~d~~~~g~e~~fgggk~~r~  320 (837)
T PLN02303        241 ERVSSRGFGHVEEDDASEGVIGEDPDFTTTISREKYANMYGPTTGDKIRLGDTNLYAEIEKDFTVYGDECKFGGGKVLRD  320 (837)
T ss_pred             HHHHhcCCCCCCCcCCccccccccccCccccChhhhhhhcCCCCCceeeecccceEEEEeecccccCceeeecCCceecc
Confidence            99999999999874222222222333577899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCcccEEEEecEEEcCCCceeeEEEEECCEEEEEecCCCCCcccCCCCccccCCCceEEecCCCEEeecc
Q 004611          321 GMGQACGHHYAKSLDTVITNAVIIDHTGIFKADIGIKNGLIVALGKAGNPDIMNDVHPNMIIGANTEVIAGERFIVTAGA  400 (742)
Q Consensus       321 ~~~~~~~~~~~~~~dlVI~Na~Iid~~gi~~adI~IkdGrIv~IG~~~~~~~~~~~~~~~~~~~~teVIDa~G~iVtPGf  400 (742)
                      ||+|+.+.+.++.+|++|+|++|+|.++++++||+|+||||++||+.++++.|++|++++++++++++||++|++|+|||
T Consensus       321 gm~~~~~~~~~~~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~  400 (837)
T PLN02303        321 GMGQATGYGAADSLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGG  400 (837)
T ss_pred             CCCcCCCCCCcCcCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCE
Confidence            99999888777789999999999998889999999999999999998888888999999999999999999999999999


Q ss_pred             eeeccCCCCchHHHHHHHHHHHHHHhCCCCCCCCCcccccCCChHHHHHHHHhcCCCCceEeecCCCCCCChHHHHHHHH
Q 004611          401 IDCHVHFICPQLAHDAIASGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIK  480 (742)
Q Consensus       401 ID~HvH~~~P~~~~~al~~GvTTl~~gGtgp~~~~~~~~~t~~~~~i~~~l~a~~~~~vn~g~~~~g~~~~~~~l~e~i~  480 (742)
                      ||+|+|+.+|++..+++++|+||+++||+++++++++++++++++.++.++++.+..+++++++++++.++.+.+.++++
T Consensus       401 ID~HVHf~~Pg~~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~~~pvn~Gf~gkG~~s~l~eL~elie  480 (837)
T PLN02303        401 IDCHVHFICPQLATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTDDLPLNFGFTGKGNTAKPEGLHEIIK  480 (837)
T ss_pred             EEeecCCCCCcHHHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcccCCCcEEEEccCcccCHHHHHHHHH
Confidence            99999999999999999999999999999998888888899999999999999999999999999887777889999999


Q ss_pred             hcCceeEeccCCCCCHHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCCeEEEEecccCCCCCCHHHHHHhhh
Q 004611          481 AGAMGLKLHEDWGSTPAAIDNCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGV  560 (742)
Q Consensus       481 aGa~glkl~~d~~~t~~~l~~~l~~A~e~g~~v~iH~dtlne~g~ve~~l~a~~g~~ih~~H~~gaggghapdiI~~a~~  560 (742)
                      +|+.++|.|.+|+.+++.+.+++++|+++|+++++|+++++|+|+++.++++++++++|++|.++++|||+||+|+.|++
T Consensus       481 aGa~GfK~h~d~gvTpelL~raLe~AkelGVpVaIHAEdLnE~G~vE~t~~a~G~RpIh~~h~~Ga~gghapdi~~~~~~  560 (837)
T PLN02303        481 AGAMGLKLHEDWGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGV  560 (837)
T ss_pred             cCcEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEecCcccccchHHHHHHHHCCChHHHHHhcCCCCCCCcHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCCCCCCCCCcchhhhhhcceEEEeeccCCCchHHHHHhhhhhhhhhhhHHHHHHHCCCeEEEecCCCccCccchh
Q 004611          561 KNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLHKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEV  640 (742)
Q Consensus       561 ~~vlpsstnp~~p~t~~tl~e~ld~l~v~hhl~~~~~edia~a~~Rir~~t~a~~~~L~d~Gv~~~lgSDs~a~gr~ge~  640 (742)
                      +|+||||||||+|||.||++||+||+|+|||+++++++|++|+++|||.+++++++.|||+|++++++||+|+|||+||+
T Consensus       561 ~nvlpsstnpt~p~t~nt~~e~~dm~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~  640 (837)
T PLN02303        561 KNVLPSSTNPTRPYTKNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEV  640 (837)
T ss_pred             CCccCCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhhhhccccCCCcccCCCCcHHHHHHHHHHHHHHHcCCCCCcccccCCCcceEEEECCCCCCCCceEEEEC
Q 004611          641 ISRTWQTAHKMKSQRGSFGPSAADNDNLRIRRYIAKYTINPAIANGFSQFVGSVEVGKLADLVLWKPSFFGAKPEMVIKG  720 (742)
Q Consensus       641 i~~~~~~~~~m~~~~~~L~~~~~~~~gl~~~~aL~~aTiNpA~~lGl~d~vGSIe~GK~ADLVV~Dp~~~~~~p~~Vi~~  720 (742)
                      +.|+||.+++|+.+++.|+.+...++|+++++||+++|+|||+++|+++++|||++||.||||||++++|+.+|.+||++
T Consensus       641 i~r~~q~A~k~~~~~g~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg~~~~~vi~~  720 (837)
T PLN02303        641 ITRTWQTAHKMKSQRGALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFGAKPEMVIKG  720 (837)
T ss_pred             eeehHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccCCCeeEEEEC
Confidence            99999999999999999987766689999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEeccCCCCCCCCCCCCCCC
Q 004611          721 GAIAWANMGDPNASIPTPEPVT  742 (742)
Q Consensus       721 G~iV~~~~g~~~~~~~~~~p~~  742 (742)
                      |+++|+.|||+|||||||||++
T Consensus       721 G~ivy~~~gd~nasipt~qp~~  742 (837)
T PLN02303        721 GQIAWAQMGDPNASIPTPEPVI  742 (837)
T ss_pred             CEEEEccCCCccccCCCCCCcc
Confidence            9999999999999999999985

>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]	Back alignment and domain information

>PRK13985 ureB urease subunit beta; Provisional	Back alignment and domain information

>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>PRK13308 ureC urease subunit alpha; Reviewed	Back alignment and domain information

>PRK13206 ureC urease subunit alpha; Reviewed	Back alignment and domain information

>TIGR01792 urease_alph urease, alpha subunit	Back alignment and domain information

>PRK13207 ureC urease subunit alpha; Reviewed	Back alignment and domain information

>PRK13309 ureC urease subunit alpha; Reviewed	Back alignment and domain information

>PRK13986 urease subunit alpha; Provisional	Back alignment and domain information

>PRK13192 bifunctional urease subunit gamma/beta; Reviewed	Back alignment and domain information

>PRK13203 ureB urease subunit beta; Reviewed	Back alignment and domain information

>PRK13198 ureB urease subunit beta; Reviewed	Back alignment and domain information

>PRK13204 ureB urease subunit beta; Reviewed	Back alignment and domain information

>TIGR00192 urease_beta urease, beta subunit	Back alignment and domain information

>COG0832 UreB Urea amidohydrolase (urease) beta subunit [Amino acid transport and metabolism]	Back alignment and domain information

>cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>PF00699 Urease_beta: Urease beta subunit CAUTION: The Prosite patterns do not match this subunit of the enzyme; InterPro: IPR002019 Urease 3	Back alignment and domain information

>PRK13202 ureB urease subunit beta; Reviewed	Back alignment and domain information

>PRK13201 ureB urease subunit beta; Reviewed	Back alignment and domain information

>COG0831 UreA Urea amidohydrolase (urease) gamma subunit [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00193 urease_gam urease, gamma subunit	Back alignment and domain information

>PRK13205 ureB urease subunit beta; Reviewed	Back alignment and domain information

>PRK13242 ureA urease subunit gamma; Provisional	Back alignment and domain information

>PRK13241 ureA urease subunit gamma; Provisional	Back alignment and domain information

>PF00547 Urease_gamma: Urease, gamma subunit enzyme!; InterPro: IPR002026 Urease 3	Back alignment and domain information

>cd00390 Urease_gamma Urease gamma-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide	Back alignment and domain information

>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3	Back alignment and domain information

>PRK07627 dihydroorotase; Provisional	Back alignment and domain information

>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)	Back alignment and domain information

>PRK06189 allantoinase; Provisional	Back alignment and domain information

>PLN02942 dihydropyrimidinase	Back alignment and domain information

>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]	Back alignment and domain information

>TIGR03178 allantoinase allantoinase	Back alignment and domain information

>TIGR02033 D-hydantoinase D-hydantoinase	Back alignment and domain information

>PLN02795 allantoinase	Back alignment and domain information

>PRK13404 dihydropyrimidinase; Provisional	Back alignment and domain information

>PRK08323 phenylhydantoinase; Validated	Back alignment and domain information

>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin	Back alignment and domain information

>PRK09357 pyrC dihydroorotase; Validated	Back alignment and domain information

>PRK09059 dihydroorotase; Validated	Back alignment and domain information

>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics	Back alignment and domain information

>PRK08044 allantoinase; Provisional	Back alignment and domain information

>PRK02382 dihydroorotase; Provisional	Back alignment and domain information

>PRK09236 dihydroorotase; Reviewed	Back alignment and domain information

>PRK07369 dihydroorotase; Provisional	Back alignment and domain information

>PRK07575 dihydroorotase; Provisional	Back alignment and domain information

>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK09060 dihydroorotase; Validated	Back alignment and domain information

>PRK08417 dihydroorotase; Provisional	Back alignment and domain information

>PRK06687 chlorohydrolase; Validated	Back alignment and domain information

>PRK15446 phosphonate metabolism protein PhnM; Provisional	Back alignment and domain information

>PRK09045 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type	Back alignment and domain information

>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	Back alignment and domain information

>PRK07228 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	Back alignment and domain information

>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed	Back alignment and domain information

>PRK12394 putative metallo-dependent hydrolase; Provisional	Back alignment and domain information

>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional	Back alignment and domain information

>PRK09061 D-glutamate deacylase; Validated	Back alignment and domain information

>PRK08204 hypothetical protein; Provisional	Back alignment and domain information

>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PRK06380 metal-dependent hydrolase; Provisional	Back alignment and domain information

>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK09356 imidazolonepropionase; Validated	Back alignment and domain information

>PRK01211 dihydroorotase; Provisional	Back alignment and domain information

>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM	Back alignment and domain information

>PRK12393 amidohydrolase; Provisional	Back alignment and domain information

>PRK06151 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>PRK08393 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>PRK07213 chlorohydrolase; Provisional	Back alignment and domain information

>TIGR01178 ade adenine deaminase	Back alignment and domain information

>PRK07203 putative chlorohydrolase/aminohydrolase; Validated	Back alignment and domain information

>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases	Back alignment and domain information

>PRK06038 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase	Back alignment and domain information

>PRK09228 guanine deaminase; Provisional	Back alignment and domain information

>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional	Back alignment and domain information

>PRK04250 dihydroorotase; Provisional	Back alignment and domain information

>PRK09237 dihydroorotase; Provisional	Back alignment and domain information

>PRK05985 cytosine deaminase; Provisional	Back alignment and domain information

>PRK00369 pyrC dihydroorotase; Provisional	Back alignment and domain information

>PRK10657 isoaspartyl dipeptidase; Provisional	Back alignment and domain information

>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA	Back alignment and domain information

>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01224 hutI imidazolonepropionase	Back alignment and domain information

>cd01303 GDEase Guanine deaminase (GDEase)	Back alignment and domain information

>PRK08418 chlorohydrolase; Provisional	Back alignment and domain information

>PRK07572 cytosine deaminase; Validated	Back alignment and domain information

>TIGR02967 guan_deamin guanine deaminase	Back alignment and domain information

>PRK07583 cytosine deaminase-like protein; Validated	Back alignment and domain information

>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA	Back alignment and domain information

>PRK14085 imidazolonepropionase; Provisional	Back alignment and domain information

>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>PRK09230 cytosine deaminase; Provisional	Back alignment and domain information

>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate	Back alignment and domain information

>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	Back alignment and domain information

>PRK10027 cryptic adenine deaminase; Provisional	Back alignment and domain information

>TIGR02022 hutF formiminoglutamate deiminase	Back alignment and domain information

>PRK09229 N-formimino-L-glutamate deiminase; Validated	Back alignment and domain information

>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids	Back alignment and domain information

>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]	Back alignment and domain information

>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915	Back alignment and domain information

>PRK06846 putative deaminase; Validated	Back alignment and domain information

>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid	Back alignment and domain information

>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis	Back alignment and domain information

>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis	Back alignment and domain information

>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A	Back alignment and domain information

>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor	Back alignment and domain information

>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>COG3964 Predicted amidohydrolase [General function prediction only]	Back alignment and domain information

>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine	Back alignment and domain information

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases	Back alignment and domain information

>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis	Back alignment and domain information

>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]	Back alignment and domain information

>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis	Back alignment and domain information

>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []	Back alignment and domain information

>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex	Back alignment and domain information

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]	Back alignment and domain information

>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F	Back alignment and domain information

>PRK05451 dihydroorotase; Provisional	Back alignment and domain information

>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type	Back alignment and domain information

>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases	Back alignment and domain information

>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B	Back alignment and domain information

>PLN02599 dihydroorotase	Back alignment and domain information

>PRK06886 hypothetical protein; Validated	Back alignment and domain information

>TIGR01430 aden_deam adenosine deaminase	Back alignment and domain information

>cd01310 TatD_DNAse TatD like proteins; E	Back alignment and domain information

>TIGR00010 hydrolase, TatD family	Back alignment and domain information

>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively	Back alignment and domain information

>PRK10812 putative DNAse; Provisional	Back alignment and domain information

>PRK11449 putative deoxyribonuclease YjjV; Provisional	Back alignment and domain information

>PRK10425 DNase TatD; Provisional	Back alignment and domain information

>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK09358 adenosine deaminase; Provisional	Back alignment and domain information

>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]	Back alignment and domain information

>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition	Back alignment and domain information

>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon	Back alignment and domain information

>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria	Back alignment and domain information

>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]	Back alignment and domain information

>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)	Back alignment and domain information

>PRK09875 putative hydrolase; Provisional	Back alignment and domain information

>cd00443 ADA_AMPD Adenosine/AMP deaminase	Back alignment and domain information

>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]	Back alignment and domain information

>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase	Back alignment and domain information

>PTZ00124 adenosine deaminase; Provisional	Back alignment and domain information

>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		742
3la4_A		840	Crystal Structure Of The First Plant Urease From Ja		0.0
4gy7_A		840	Crystallographic Structure Analysis Of Urease From		0.0
4h9m_A		840	The First Jack Bean Urease (Canavalia Ensiformis) C		0.0
1kra_C		567	Crystal Structure Of Klebsiella Aerogenes Urease, I		0.0
1a5k_C		566	K217e Variant Of Klebsiella Aerogenes Urease Length		0.0
1a5m_C		566	K217a Variant Of Klebsiella Aerogenes Urease Length		0.0
1fwj_C		567	Klebsiella Aerogenes Urease, Native Length = 567		0.0
1ef2_A		566	Crystal Structure Of Manganese-Substituted Klebsiel		0.0
1krc_C		567	Crystal Structure Of Klebsiella Aerogenes Urease, I		0.0
1a5o_C		566	K217c Variant Of Klebsiella Aerogenes Urease, Chemi		0.0
1ejt_C		567	Crystal Structure Of The H219q Variant Of Klebsiell		0.0
1ejv_C		567	Crystal Structure Of The H320q Variant Of Klebsiell		0.0
1ejr_C		567	Crystal Structure Of The D221a Variant Of Klebsiell		0.0
1eju_C		567	Crystal Structure Of The H320n Variant Of Klebsiell		0.0
1ejs_C		567	Crystal Structure Of The H219n Variant Of Klebsiell		0.0
1fwi_C		567	Klebsiella Aerogenes Urease, H134a Variant Length =		0.0
1krb_C		567	Crystal Structure Of Klebsiella Aerogenes Urease, I		0.0
1fwa_C		567	Klebsiella Aerogenes Urease, C319a Variant At Ph 7.		0.0
1fwg_C		567	Klebsiella Aerogenes Urease, C319s Variant Length =		0.0
1fwh_C		567	Klebsiella Aerogenes Urease, C319y Variant Length =		0.0
1fwf_C		567	Klebsiella Aerogenes Urease, C319d Variant Length =		0.0
1ubp_C		570	Crystal Structure Of Urease From Bacillus Pasteurii		1e-178
1ie7_C		570	Phosphate Inhibited Bacillus Pasteurii Urease Cryst		1e-178
1e9z_B		569	Crystal Structure Of Helicobacter Pylori Urease Len		1e-176
1e9y_B		569	Crystal Structure Of Helicobacter Pylori Urease In		1e-175
3qga_C		568	3.0 A Model Of Iron Containing Urease Urea2b2 From		1e-174
1e9y_A		238	Crystal Structure Of Helicobacter Pylori Urease In		1e-57
3qga_A		225	3.0 A Model Of Iron Containing Urease Urea2b2 From		3e-40
2kau_A		100	The Crystal Structure Of Urease From Klebsiella Aer		7e-26
2kau_B		106	The Crystal Structure Of Urease From Klebsiella Aer		4e-23
3ubp_A		101	Diamidophosphate Inhibited Bacillus Pasteurii Ureas		8e-23
1a5k_B		101	K217e Variant Of Klebsiella Aerogenes Urease Length		9e-23
3ubp_B		126	Diamidophosphate Inhibited Bacillus Pasteurii Ureas		1e-22
1ubp_B		122	Crystal Structure Of Urease From Bacillus Pasteurii		1e-22
1ie7_A		100	Phosphate Inhibited Bacillus Pasteurii Urease Cryst		3e-22
2fvh_A		120	Crystal Structure Of Rv1848, A Urease Gamma Subunit		5e-19
4fur_A		104	Crystal Structure Of Urease Subunit Gamma 2 From Br		3e-17

>pdb|3LA4|A Chain A, Crystal Structure Of The First Plant Urease From Jack Bean (Canavalia Ensiformis) Length = 840