Citrus Sinensis ID: 004624
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 741 | ||||||
| 297746269 | 734 | unnamed protein product [Vitis vinifera] | 0.967 | 0.976 | 0.807 | 0.0 | |
| 255578137 | 689 | conserved hypothetical protein [Ricinus | 0.917 | 0.986 | 0.772 | 0.0 | |
| 356543478 | 731 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.965 | 0.758 | 0.0 | |
| 224106768 | 675 | predicted protein [Populus trichocarpa] | 0.900 | 0.988 | 0.770 | 0.0 | |
| 356547175 | 738 | PREDICTED: uncharacterized protein LOC10 | 0.954 | 0.957 | 0.766 | 0.0 | |
| 42569411 | 737 | pleckstrin homology (PH) and lipid-bindi | 0.967 | 0.972 | 0.720 | 0.0 | |
| 297826103 | 737 | hypothetical protein ARALYDRAFT_901677 [ | 0.967 | 0.972 | 0.720 | 0.0 | |
| 357453959 | 800 | hypothetical protein MTR_2g094620 [Medic | 0.956 | 0.886 | 0.674 | 0.0 | |
| 414871042 | 766 | TPA: hypothetical protein ZEAMMB73_43508 | 0.952 | 0.921 | 0.700 | 0.0 | |
| 13384376 | 773 | unknown protein [Oryza sativa Japonica G | 0.952 | 0.913 | 0.694 | 0.0 |
| >gi|297746269|emb|CBI16325.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/728 (80%), Positives = 634/728 (87%), Gaps = 11/728 (1%)
Query: 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD 69
GRMEGWL LIRSNR GLQYSRKRYF+LEDH+LKSFKSVP SK+E PVRSAIIDSCIR TD
Sbjct: 8 GRMEGWLFLIRSNRFGLQYSRKRYFVLEDHYLKSFKSVPISKDEVPVRSAIIDSCIRATD 67
Query: 70 NGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHI 129
NGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAA+W+ S QEAALK GP+ G +
Sbjct: 68 NGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAARWMQSFQEAALKAGPNTR-GGGV 126
Query: 130 GCPNSPWESFRLSGSSRASHTKSIDWTLCSGTHMEQVTADVIAPSPWTIFGCQNGLRLFK 189
GC S W SFRL S+R T SIDWTLCS THM+ +T+DVIAPSPWTIFGCQNGLRLFK
Sbjct: 127 GCSKSKWPSFRLICSNRIHRTNSIDWTLCSSTHMDPMTSDVIAPSPWTIFGCQNGLRLFK 186
Query: 190 EGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRS-------VGCVVEHLDGH 242
E KDRGS GKWDDHPAIMAVGVVDGTSEAIFQTLMSLG SRS G VVEHLDGH
Sbjct: 187 EAKDRGSHGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGPSRSEWDFCFYKGNVVEHLDGH 246
Query: 243 TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLK 302
TDI+HKQLY DWLPWGMKRRDLLLRRYWRREDDGTYVILYHSV HKKCP Q+G VRACLK
Sbjct: 247 TDIVHKQLYRDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVIHKKCPPQRGYVRACLK 306
Query: 303 SGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 362
SGGYV++P+N GK+SVVKHMLAIDWK WRSYLQ SSARSITIRMLGRVAALRELFRAK G
Sbjct: 307 SGGYVVSPVNQGKQSVVKHMLAIDWKFWRSYLQTSSARSITIRMLGRVAALRELFRAKLG 366
Query: 363 NYSSPEFLSGELTRNMRMHQTDGNM---VQMPTEDGNSKKNTSEEVDQVSSEHASLVGLN 419
NY S +F SGELT N+R+ Q++ ++ Q E+ + EVD+ SEHASLVGLN
Sbjct: 367 NYPSSDFSSGELTSNVRLPQSEQDVKTEAQTLAEEKTEEDIEDREVDKTPSEHASLVGLN 426
Query: 420 DAADEFFDVPEPSDYDDSENGWTSDFGPEMNSQDTRHPKISTAAGFVRKLHDLAVQKRGY 479
DAADEFFDVPEPSD D +ENGW SDFG EM SQD RHPK+STAAGFV+KLHDLA+QKRGY
Sbjct: 427 DAADEFFDVPEPSDSDLAENGWPSDFGSEMYSQDIRHPKLSTAAGFVKKLHDLAIQKRGY 486
Query: 480 VDLQGTAKEDNFSCCYGTTLQKDPTCTLPCSWTSTDPSTFLIRGKNYLQDRHKVKAKGTL 539
+DLQ A+ED CCYG TL KDPTC L CSWT DPSTFLIRGKNYL+D KVKAKGTL
Sbjct: 487 MDLQEVAREDRIPCCYGATLPKDPTCNLACSWTEADPSTFLIRGKNYLEDHQKVKAKGTL 546
Query: 540 MQMVAADWLKSDKREDDLGGRPGGIVQKYAEQGGPEFFFIINIQVPGSTTYSLALYYMMT 599
M+MVAADWL+SDKREDDLGGRP IVQKYA QGGPEFFFI+NIQVPGSTTYSLALYYMM
Sbjct: 547 MKMVAADWLRSDKREDDLGGRPESIVQKYAAQGGPEFFFIVNIQVPGSTTYSLALYYMMN 606
Query: 600 TPVKDAPLLESFINGDDAYRNSRFKLIPYISEGSWIVKQSVGKKACLIGQALEINYFHGK 659
TPV+D+PLLESFI GDDAYRNSRFKLIPYIS+GSWIVKQSVGKKACL+GQALEINYFHGK
Sbjct: 607 TPVEDSPLLESFIKGDDAYRNSRFKLIPYISQGSWIVKQSVGKKACLVGQALEINYFHGK 666
Query: 660 NYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLIQANTEEELPEFLLGTCRLNHLDA 719
NYLELG+DIGSSTVARGVVSLVLGYLNNLVIEM FLIQANT EELPE+LLGTCRLNHLDA
Sbjct: 667 NYLELGIDIGSSTVARGVVSLVLGYLNNLVIEMTFLIQANTPEELPEYLLGTCRLNHLDA 726
Query: 720 AKAVLLKP 727
+K+VL+KP
Sbjct: 727 SKSVLVKP 734
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578137|ref|XP_002529938.1| conserved hypothetical protein [Ricinus communis] gi|223530568|gb|EEF32446.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356543478|ref|XP_003540187.1| PREDICTED: uncharacterized protein LOC100779206 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224106768|ref|XP_002314279.1| predicted protein [Populus trichocarpa] gi|222850687|gb|EEE88234.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356547175|ref|XP_003541992.1| PREDICTED: uncharacterized protein LOC100812931 [Glycine max] | Back alignment and taxonomy information |
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| >gi|42569411|ref|NP_180399.2| pleckstrin homology (PH) and lipid-binding START domain-containing protein [Arabidopsis thaliana] gi|330253013|gb|AEC08107.1| pleckstrin homology (PH) and lipid-binding START domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297826103|ref|XP_002880934.1| hypothetical protein ARALYDRAFT_901677 [Arabidopsis lyrata subsp. lyrata] gi|297326773|gb|EFH57193.1| hypothetical protein ARALYDRAFT_901677 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|357453959|ref|XP_003597260.1| hypothetical protein MTR_2g094620 [Medicago truncatula] gi|355486308|gb|AES67511.1| hypothetical protein MTR_2g094620 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|414871042|tpg|DAA49599.1| TPA: hypothetical protein ZEAMMB73_435086 [Zea mays] | Back alignment and taxonomy information |
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| >gi|13384376|gb|AAK21344.1|AC024594_8 unknown protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 741 | ||||||
| TAIR|locus:2057547 | 737 | AT2G28320 [Arabidopsis thalian | 0.967 | 0.972 | 0.705 | 3.5e-281 | |
| TAIR|locus:2102465 | 733 | AT3G54800 [Arabidopsis thalian | 0.954 | 0.964 | 0.629 | 2.5e-239 | |
| TAIR|locus:2117134 | 724 | EDR2 "ENHANCED DISEASE RESISTA | 0.307 | 0.314 | 0.467 | 2.1e-97 | |
| TAIR|locus:2163548 | 719 | AT5G45560 [Arabidopsis thalian | 0.307 | 0.317 | 0.463 | 1.3e-95 | |
| TAIR|locus:2182417 | 811 | AT5G35180 [Arabidopsis thalian | 0.292 | 0.267 | 0.434 | 1.7e-61 | |
| TAIR|locus:2198866 | 313 | AT1G06050 "AT1G06050" [Arabido | 0.304 | 0.722 | 0.371 | 4.9e-42 | |
| TAIR|locus:2183705 | 302 | AT5G10750 "AT5G10750" [Arabido | 0.309 | 0.758 | 0.383 | 2.3e-40 | |
| TAIR|locus:2179245 | 286 | AT5G25010 "AT5G25010" [Arabido | 0.290 | 0.751 | 0.360 | 4.4e-36 | |
| TAIR|locus:2149428 | 294 | AT5G24990 "AT5G24990" [Arabido | 0.288 | 0.727 | 0.352 | 9.3e-36 | |
| TAIR|locus:2179255 | 269 | AT5G25020 "AT5G25020" [Arabido | 0.152 | 0.420 | 0.365 | 1.7e-28 |
| TAIR|locus:2057547 AT2G28320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2702 (956.2 bits), Expect = 3.5e-281, P = 3.5e-281
Identities = 522/740 (70%), Positives = 598/740 (80%)
Query: 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDS 63
S+ S+ +MEGWL++IRSNR GL +SRKRYF+L DH LKSFKS+ SK ++ RSA+IDS
Sbjct: 5 SENESETKMEGWLYIIRSNRFGLHFSRKRYFVLGDHLLKSFKSISDSKTKNAGRSAVIDS 64
Query: 64 CIRVTDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQ 123
CIRVTDNGRE++HRK FFIFTLYNTSNHNDQLKLGASSPE+AA+WI+ ++EAALKG P
Sbjct: 65 CIRVTDNGRENVHRKAFFIFTLYNTSNHNDQLKLGASSPEDAARWINLIKEAALKGAPFP 124
Query: 124 GVGDHIGCPNSPWESFRLSGSSRASHTKSIDWTLCSGTHMEQVTADVIAPSPWTIFGCQN 183
G D C S W+S RLS S R H+ SIDWTL S ++ VT DV+APSPWTIFGCQN
Sbjct: 125 G--DVFNCSRSRWDSLRLSSSVRDHHSNSIDWTLRSSARVDPVTTDVVAPSPWTIFGCQN 182
Query: 184 GLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRSV-------GCVV 236
GLRLFKE K+R S G+WDDHPAIMAVGVVDGTSE IFQTL+SLG SRS G VV
Sbjct: 183 GLRLFKEAKERDSLGRWDDHPAIMAVGVVDGTSETIFQTLLSLGPSRSEWDFCFYQGSVV 242
Query: 237 EHLDGHTDIIHKQLYSDWLPWGMKXXXXXXXXXXXXXXXGTYVILYHSVFHKKCPRQKGS 296
EHLDGHTDIIHKQLYSDWLPWGMK GTYVILYHSVFHKKCP QKG
Sbjct: 243 EHLDGHTDIIHKQLYSDWLPWGMKRRDFSLRRYWRREDDGTYVILYHSVFHKKCPPQKGY 302
Query: 297 VRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALREL 356
VRACLKSGGYVI+P+++GK+SVVKHMLA+DWK WRSY++PS ARSIT++MLGR++ALREL
Sbjct: 303 VRACLKSGGYVISPIDNGKQSVVKHMLAVDWKSWRSYVKPSLARSITVKMLGRISALREL 362
Query: 357 FRAKQGNYSSPEFLSGELTRNMRMHQT-DGNMVQMPTEDGNSKKNTS-EEVDQVSSEHAS 414
FRAK G++ P SGEL+R+ R+ Q DG + K+T+ EE D+ SE +S
Sbjct: 363 FRAKHGSFP-PNLSSGELSRSARLTQNEDGVFGDSSLRENEMFKDTANEERDKFPSERSS 421
Query: 415 LVGLNDAADEFFDVPEPSDYDDSENGWTSDFGPEMNSQDTRHPKISTAAGFVRKLHDLAV 474
LV L DEFFDVPEPSD D+ ++ WTSDF + Q++R PK+++A V+KLHDLAV
Sbjct: 422 LVDL----DEFFDVPEPSDNDNLDDSWTSDFDLDTCCQESRQPKLNSATSLVKKLHDLAV 477
Query: 475 QKRGYVDLQGTAKED-------NFSCCYGTTLQKDPTCTLPCSWTSTDPSTFLIRGKNYL 527
QKRGYVDL AKE+ N CCYGTTL DP+C LPCSWT+TDPSTFLIRGK YL
Sbjct: 478 QKRGYVDLHERAKEESSPHATCNPPCCYGTTLPTDPSCDLPCSWTTTDPSTFLIRGKTYL 537
Query: 528 QDRHKVKAKGTLMQMVAADWLKSDKREDDLGGRPGGIVQKYAEQGGPEFFFIINIQVPGS 587
D+ KVKAKGTLM+MVAADWLKSDKREDDLG RPGGIVQKYA +GGPEFFFI+NIQVPGS
Sbjct: 538 DDQKKVKAKGTLMEMVAADWLKSDKREDDLGSRPGGIVQKYAAKGGPEFFFIVNIQVPGS 597
Query: 588 TTYSLALYYMMTTPVKDAPLLESFINGDDAYRNSRFKLIPYISEGSWIVKQSVGKKACLI 647
TTYSL LYYMM+TP+++ PLL SF+NGDDAYRNSRFKLIPYIS+GSWIVKQSVGKKACLI
Sbjct: 598 TTYSLVLYYMMSTPIEEHPLLVSFVNGDDAYRNSRFKLIPYISKGSWIVKQSVGKKACLI 657
Query: 648 GQALEINYFHGKNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLIQANTEEELPEF 707
GQALEINYF GKNY+ELGVDIGSSTVARGVVSLVLGYLN LVIEMAFLIQANTEEELPE+
Sbjct: 658 GQALEINYFRGKNYIELGVDIGSSTVARGVVSLVLGYLNKLVIEMAFLIQANTEEELPEY 717
Query: 708 LLGTCRLNHLDAAKAVLLKP 727
LLGTCR NHLDA+KA+ + P
Sbjct: 718 LLGTCRFNHLDASKAISIIP 737
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| TAIR|locus:2102465 AT3G54800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117134 EDR2 "ENHANCED DISEASE RESISTANCE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163548 AT5G45560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2149428 AT5G24990 "AT5G24990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179255 AT5G25020 "AT5G25020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 741 | |||
| PLN00188 | 719 | PLN00188, PLN00188, enhanced disease resistance pr | 1e-141 | |
| pfam07059 | 215 | pfam07059, DUF1336, Protein of unknown function (D | 3e-98 | |
| cd00177 | 193 | cd00177, START, Lipid-binding START domain of mamm | 2e-32 | |
| smart00234 | 205 | smart00234, START, in StAR and phosphatidylcholine | 8e-15 | |
| cd08871 | 222 | cd08871, START_STARD10-like, Lipid-binding START d | 2e-13 | |
| smart00233 | 102 | smart00233, PH, Pleckstrin homology domain | 4e-10 | |
| pfam01852 | 205 | pfam01852, START, START domain | 3e-09 | |
| pfam00169 | 101 | pfam00169, PH, PH domain | 5e-08 | |
| cd00821 | 92 | cd00821, PH, Pleckstrin homology (PH) domain | 1e-05 | |
| cd13293 | 88 | cd13293, PH_CpORP2-like, Cryptosporidium-like Oxys | 3e-04 | |
| cd08868 | 208 | cd08868, START_STARD1_3_like, Cholesterol-binding | 3e-04 | |
| cd08876 | 195 | cd08876, START_1, Uncharacterized subgroup of the | 6e-04 |
| >gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional | Back alignment and domain information |
|---|
Score = 430 bits (1106), Expect = e-141
Identities = 258/776 (33%), Positives = 379/776 (48%), Gaps = 121/776 (15%)
Query: 13 EGWLHLIRSNR--IGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDN 70
EGW+ +R R IG Y RYF+LE L +K P N+ P+++ +ID RV D
Sbjct: 7 EGWM--VRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQD-NQVPIKTLLIDGNCRVEDR 63
Query: 71 GRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKW-------IHSLQEAALKGGPH- 122
G ++ H + ++ ++YN ++ + A + +EA W I Q++ + G
Sbjct: 64 GLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQHQDSQVPNGNKY 123
Query: 123 ------QGVGDHIGCPNSPWES-FRLSGSSRASHTKSI--------------DWTLCSGT 161
G+ + +S ES F +H + DWT +
Sbjct: 124 ASFEYKSGMDNGRTASSSDHESQFSAQEDEEDTHRDLLRRTTIGNGPPDSVLDWTKEFDS 183
Query: 162 HMEQVTADVIAPSP--WTIFGCQNGLRLFKEGKD------RGSRGKWDDHPAIMAVGVVD 213
+ ++ A S W + CQNGLR+F+E + SR A+ AVGVV+
Sbjct: 184 ELSNQNSNNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSR-------AMKAVGVVE 236
Query: 214 GTSEAIFQTLMSLGASR-------SVGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLL 266
T E IF+ +MS+ +R G +VE +DGHT I++ +L DW P + RDL
Sbjct: 237 ATCEEIFELVMSMDGTRFEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCY 296
Query: 267 RRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPM---NHGKKSVVKHML 323
RYWRR DDG+YV+L+ S H+ C Q G VRA L+SGG+ I+P+ N ++ V+H++
Sbjct: 297 VRYWRRNDDGSYVVLFRSREHENCGPQPGFVRAHLESGGFNISPLKPRNGRPRTQVQHLM 356
Query: 324 AIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQGNYSSPEFLSGELTRNMRMHQT 383
ID K W PS + ++ML VA LRE F + P
Sbjct: 357 QIDLKGWGVGYIPSFQQHCLLQMLNSVAGLREWFSQTDERGAPPRIPV------------ 404
Query: 384 DGNMVQMPTEDGNSKKNTSEEVDQVSSEHASLVGLNDAA-------DEFFDVPEPSDYDD 436
MV M + +SKKN + S + + N DE F +PE +
Sbjct: 405 ---MVNMASASVSSKKNQKPQESSPSLDQTNAASRNSVMMDEDSDDDEEFQIPESEQEPE 461
Query: 437 SENGWTSDFGPEMNSQDTRHPKISTAAGFVRKLHDLAVQKRGYVDLQGTAKEDNFSCCYG 496
+ T D E QD +DL C+
Sbjct: 462 TTKNETKDTAMEEEPQDK-------------------------IDLS----------CFS 486
Query: 497 TTLQKDPTCTLPCSWTSTDPSTFLIRGKNYLQDRHKVKAKGTLMQMVAADWLKSDKREDD 556
L++D W +D + F +R KN+ D+ K+ A LM +VA DW K KR D
Sbjct: 487 GNLRRDDRDKARDCWRISDGNNFKVRSKNFCYDKSKIPAGKHLMDLVAVDWFKDTKRMDH 546
Query: 557 LGGRPGGIVQKYAEQGGPEFFFIINIQVPGSTTYSLALYYMMTTPVKDAPLLESFINGDD 616
+ R G Q AE+G F F++N+QVPGST YS+ Y++ V + LL+ F++GDD
Sbjct: 547 VARRKGCAAQVAAEKG--LFSFVVNLQVPGSTHYSMVFYFVTKELVPGS-LLQRFVDGDD 603
Query: 617 AYRNSRFKLIPYISEGSWIVKQSVGKKACLIGQALEINYFHGKNYLELGVDIGSSTVARG 676
+RNSR KLIP + +GSWIV+QSVG CL+G+A++ NY G YLE+ VDIGSSTVA G
Sbjct: 604 EFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANG 663
Query: 677 VVSLVLGYLNNLVIEMAFLIQANTEEELPEFLLGTCRLNHLDAAKAVL--LKPSSR 730
V+ LV+G + LV++MAFL+QANT EELPE L+G R++H++ + A++ L P +
Sbjct: 664 VLGLVIGVITTLVVDMAFLVQANTYEELPERLIGAVRVSHVELSSAIVPKLDPDTS 719
|
Length = 719 |
| >gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336) | Back alignment and domain information |
|---|
| >gnl|CDD|176851 cd00177, START, Lipid-binding START domain of mammalian STARD1-STARD15 and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214575 smart00234, START, in StAR and phosphatidylcholine transfer protein | Back alignment and domain information |
|---|
| >gnl|CDD|176880 cd08871, START_STARD10-like, Lipid-binding START domain of mammalian STARD10 and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|216740 pfam01852, START, START domain | Back alignment and domain information |
|---|
| >gnl|CDD|215766 pfam00169, PH, PH domain | Back alignment and domain information |
|---|
| >gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241447 cd13293, PH_CpORP2-like, Cryptosporidium-like Oxysterol binding protein related protein 2 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|176877 cd08868, START_STARD1_3_like, Cholesterol-binding START domain of mammalian STARD1, -3 and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|176885 cd08876, START_1, Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 741 | |||
| PLN00188 | 719 | enhanced disease resistance protein (EDR2); Provis | 100.0 | |
| PF07059 | 227 | DUF1336: Protein of unknown function (DUF1336); In | 100.0 | |
| cd08904 | 204 | START_STARD6-like Lipid-binding START domain of ma | 100.0 | |
| cd08868 | 208 | START_STARD1_3_like Cholesterol-binding START doma | 99.97 | |
| cd08873 | 235 | START_STARD14_15-like Lipid-binding START domain o | 99.97 | |
| cd08914 | 236 | START_STARD15-like Lipid-binding START domain of m | 99.97 | |
| cd08906 | 209 | START_STARD3-like Cholesterol-binding START domain | 99.97 | |
| cd08869 | 197 | START_RhoGAP C-terminal lipid-binding START domain | 99.97 | |
| cd08913 | 240 | START_STARD14-like Lipid-binding START domain of m | 99.97 | |
| cd08902 | 202 | START_STARD4-like Lipid-binding START domain of ma | 99.97 | |
| cd08903 | 208 | START_STARD5-like Lipid-binding START domain of ma | 99.97 | |
| cd08867 | 206 | START_STARD4_5_6-like Lipid-binding START domain o | 99.97 | |
| cd08874 | 205 | START_STARD9-like C-terminal START domain of mamma | 99.97 | |
| cd08909 | 205 | START_STARD13-like C-terminal lipid-binding START | 99.97 | |
| cd08907 | 205 | START_STARD8-like C-terminal lipid-binding START d | 99.96 | |
| cd08905 | 209 | START_STARD1-like Cholesterol-binding START domain | 99.96 | |
| cd08871 | 222 | START_STARD10-like Lipid-binding START domain of m | 99.96 | |
| smart00234 | 206 | START in StAR and phosphatidylcholine transfer pro | 99.95 | |
| PF01852 | 206 | START: START domain; InterPro: IPR002913 START (St | 99.94 | |
| cd08872 | 235 | START_STARD11-like Ceramide-binding START domain o | 99.94 | |
| cd08911 | 207 | START_STARD7-like Lipid-binding START domain of ma | 99.94 | |
| cd08908 | 204 | START_STARD12-like C-terminal lipid-binding START | 99.94 | |
| cd00177 | 193 | START Lipid-binding START domain of mammalian STAR | 99.92 | |
| cd08910 | 207 | START_STARD2-like Lipid-binding START domain of ma | 99.92 | |
| cd08870 | 209 | START_STARD2_7-like Lipid-binding START domain of | 99.91 | |
| cd08876 | 195 | START_1 Uncharacterized subgroup of the steroidoge | 99.91 | |
| cd08877 | 215 | START_2 Uncharacterized subgroup of the steroidoge | 99.88 | |
| KOG2761 | 219 | consensus START domain-containing proteins involve | 99.75 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 99.49 | |
| cd08875 | 229 | START_ArGLABRA2_like C-terminal lipid-binding STAR | 99.45 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 99.45 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 99.4 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 99.33 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 99.29 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 99.29 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 99.28 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 99.24 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 99.24 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 99.22 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 99.21 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 99.18 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 99.17 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 99.17 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 99.15 | |
| cd08864 | 208 | SRPBCC_DUF3074 DUF3074, an uncharacterized ligand- | 99.15 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 99.12 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 99.12 | |
| cd01263 | 122 | PH_anillin Anillin Pleckstrin homology (PH) domain | 99.01 | |
| KOG0930 | 395 | consensus Guanine nucleotide exchange factor Cytoh | 98.93 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 98.92 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 98.88 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 98.88 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 98.83 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 98.81 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 98.8 | |
| KOG1739 | 611 | consensus Serine/threonine protein kinase GPBP [Si | 98.78 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 98.76 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 98.76 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 98.75 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 98.73 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 98.52 | |
| cd01230 | 117 | PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 | 98.33 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 98.29 | |
| cd07813 | 138 | COQ10p_like Coenzyme Q-binding protein COQ10p and | 97.98 | |
| PF11274 | 184 | DUF3074: Protein of unknown function (DUF3074) | 97.97 | |
| cd08866 | 144 | SRPBCC_11 Ligand-binding SRPBCC domain of an uncha | 97.69 | |
| PF15410 | 119 | PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN | 97.55 | |
| cd01234 | 117 | PH_CADPS CADPS (Ca2+-dependent activator protein) | 97.55 | |
| KOG2200 | 674 | consensus Tumour suppressor protein p122-RhoGAP/DL | 97.5 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 97.5 | |
| cd01243 | 122 | PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin | 97.13 | |
| cd07819 | 140 | SRPBCC_2 Ligand-binding SRPBCC domain of an unchar | 97.06 | |
| cd01239 | 117 | PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom | 97.05 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 96.92 | |
| cd01224 | 109 | PH_Collybistin Collybistin pleckstrin homology (PH | 96.86 | |
| cd05018 | 144 | CoxG Carbon monoxide dehydrogenase subunit G (CoxG | 96.84 | |
| cd01259 | 114 | PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr | 96.79 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 96.69 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 96.58 | |
| cd08861 | 142 | OtcD1_ARO-CYC_like N-terminal and C-terminal aroma | 96.47 | |
| KOG3640 | 1116 | consensus Actin binding protein Anillin [Cell cycl | 96.46 | |
| PF15408 | 104 | PH_7: Pleckstrin homology domain | 96.39 | |
| PLN02866 | 1068 | phospholipase D | 96.18 | |
| PF03364 | 130 | Polyketide_cyc: Polyketide cyclase / dehydrase and | 96.11 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 95.96 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 95.84 | |
| cd01249 | 104 | PH_oligophrenin Oligophrenin Pleckstrin homology ( | 95.62 | |
| cd01221 | 125 | PH_ephexin Ephexin Pleckstrin homology (PH) domain | 95.45 | |
| KOG1090 | 1732 | consensus Predicted dual-specificity phosphatase [ | 95.45 | |
| cd08860 | 146 | TcmN_ARO-CYC_like N-terminal aromatase/cyclase dom | 95.4 | |
| cd07817 | 139 | SRPBCC_8 Ligand-binding SRPBCC domain of an unchar | 94.97 | |
| cd07821 | 140 | PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), | 94.87 | |
| cd01258 | 108 | PH_syntrophin Syntrophin pleckstrin homology (PH) | 94.86 | |
| PRK10724 | 158 | hypothetical protein; Provisional | 94.45 | |
| PF14593 | 104 | PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A. | 94.14 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 93.49 | |
| cd07823 | 146 | SRPBCC_5 Ligand-binding SRPBCC domain of an unchar | 93.34 | |
| KOG3845 | 241 | consensus MLN, STAR and related lipid-binding prot | 91.95 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 91.52 | |
| KOG3751 | 622 | consensus Growth factor receptor-bound proteins (G | 90.71 | |
| cd01223 | 116 | PH_Vav Vav pleckstrin homology (PH) domain. Vav pl | 90.65 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 89.31 | |
| cd08865 | 140 | SRPBCC_10 Ligand-binding SRPBCC domain of an uncha | 87.9 | |
| PF06240 | 140 | COXG: Carbon monoxide dehydrogenase subunit G (Cox | 87.77 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 87.73 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 87.37 | |
| cd07812 | 141 | SRPBCC START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SR | 86.84 | |
| cd07818 | 150 | SRPBCC_1 Ligand-binding SRPBCC domain of an unchar | 85.82 | |
| PF10604 | 139 | Polyketide_cyc2: Polyketide cyclase / dehydrase an | 83.94 | |
| KOG1117 | 1186 | consensus Rho- and Arf-GTPase activating protein A | 83.34 | |
| cd07824 | 146 | SRPBCC_6 Ligand-binding SRPBCC domain of an unchar | 82.4 |
| >PLN00188 enhanced disease resistance protein (EDR2); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-178 Score=1504.10 Aligned_cols=671 Identities=34% Similarity=0.607 Sum_probs=597.7
Q ss_pred CCCcceeeEEEEeecccccccceeeEEEEecceeeccccCCCCCCCCCceEEEeecceEEecCCccccccceeEEEEEEe
Q 004624 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRESIHRKVFFIFTLYN 87 (741)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~RyfvL~g~~l~~yk~~p~~~~~~Pi~~~vid~~~~V~d~gr~~~~~~~~yvf~i~~ 87 (741)
+.+.||||||++|+||||++|||+|||||+||+|+|||++|.++ ++|||+++|||||||||+|||+|||+++|||+|||
T Consensus 2 ~~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn 80 (719)
T PLN00188 2 SKVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 80 (719)
T ss_pred CcceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc-cccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence 46779999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCCCceEEEecCCHHHHHHHHHHHHHHHHhCCCCCCC----C--------------cccCCCC-----------CCCcc
Q 004624 88 TSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGV----G--------------DHIGCPN-----------SPWES 138 (741)
Q Consensus 88 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~~~~~~~~~----~--------------~~~~~~~-----------~~~~~ 138 (741)
+++|+++++|||.|+|||++||+||++|++|+...+.. . ++.+++. .+.++
T Consensus 81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 160 (719)
T PLN00188 81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQHQDSQVPNGNKYASFEYKSGMDNGRTASSSDHESQFSAQEDEEDTHRDL 160 (719)
T ss_pred CCCccccEEEecCCHHHHHHHHHHHHHHHhhhccccccccccccceeeccccccccccccccccccccccccccccCccc
Confidence 99999999999999999999999999999975322110 0 1112222 25577
Q ss_pred cccccCCCCCCCccccCCCcCCc--cccccccccccCCCcEEEEeeCCeEEEEeccCCCCCCCCCCccEEEEEEEecCCH
Q 004624 139 FRLSGSSRASHTKSIDWTLCSGT--HMEQVTADVIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTS 216 (741)
Q Consensus 139 ~r~~~~~~~~~~~~~~w~~~~~~--~n~~~~~~~~a~s~Wkl~~~~nGVrVy~~~~~~~~~~~~~~~~~~Ka~gvVdasp 216 (741)
+|..+||+|||.+.++||...+. +|+++.+|+++.++|++++|+||+|||++..+.+++++ +.+++||++|+|+++|
T Consensus 161 ~r~~tig~gp~~s~~~~t~~~~~~~~~~~~~~d~~~~~~Wr~~~c~NGlRiF~e~~~~~~~~~-~~~~~mKavGVV~asp 239 (719)
T PLN00188 161 LRRTTIGNGPPDSVLDWTKEFDSELSNQNSNNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPR-SCSRAMKAVGVVEATC 239 (719)
T ss_pred ceeeeccCCCcchhcccccccCccccccCCCccccccCCeEEEEeeccceeehhhhccccccc-cCCceeEEEEEecCCH
Confidence 78789999999999999977664 38899999999999999999999999999999887766 4569999999999999
Q ss_pred HHHHHHHhcCCCCeeE-------EEEEEeecCceEEEEEEeecCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEEccCCCC
Q 004624 217 EAIFQTLMSLGASRSV-------GCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKK 289 (741)
Q Consensus 217 e~Vf~~L~d~d~~r~e-------~~VVE~ID~~tdIvY~~~~~~~~P~~vspRDFV~lR~wrr~~DGsyVI~~~SV~Hp~ 289 (741)
++||++||+++..|++ +++||+||+||+|+|.++++.|+|+.++|||||++|||++++||+|+|+++||+||+
T Consensus 240 E~Ifd~Vm~~~~~R~eWD~~~~~~~vIE~ID~htdI~Y~~~~~~~~~~~ispRDFV~~Rywrr~eDGsYvil~~Sv~Hp~ 319 (719)
T PLN00188 240 EEIFELVMSMDGTRFEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHEN 319 (719)
T ss_pred HHHHHHHhccCcccccchhcccceEEEEEecCCeEEEEEEeccccccCccCcceeEEEEEEEEcCCCcEEEeeeeeecCC
Confidence 9999999987765554 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEeEEEeceeEEEEecC---CCCeeEEEEEEeeecCCccccccccchhhHHHHHHHHHHHHHHHHHhccCCCCC
Q 004624 290 CPRQKGSVRACLKSGGYVITPMN---HGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQGNYSS 366 (741)
Q Consensus 290 ~Pp~kG~VRaei~~sGyvI~Pl~---~~~~~~VT~i~qvD~kGwip~~~~~~~~~~~~~mL~~Va~LRe~~~~~~~~~~~ 366 (741)
|||++|||||++++|||+|.|++ +.++|+|+|++|+|||||+|+|.++|+++++++||++||+|||||+++++.+.
T Consensus 320 cPP~kG~VRg~~~pGGwiIsPL~~~~g~~r~lv~~~lqtDlkGW~~~y~~s~~~~~~l~mL~~VAgLrE~~~~~~~~~~- 398 (719)
T PLN00188 320 CGPQPGFVRAHLESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYIPSFQQHCLLQMLNSVAGLREWFSQTDERGA- 398 (719)
T ss_pred CCCCCCeEEEEEeCCEEEEEECCCCCCCCceEEEEEEEEccCccccccCccccccchHHHHHHHHHHHHHHhcCcccCc-
Confidence 99999999999999999999994 33699999999999999999999999999999999999999999999998777
Q ss_pred CccccccccccccccccCCCcccCCCcCCC--CCCCCcccccccccccccccCCCCccccccCCCCCCCCCCCCCCCCCC
Q 004624 367 PEFLSGELTRNMRMHQTDGNMVQMPTEDGN--SKKNTSEEVDQVSSEHASLVGLNDAADEFFDVPEPSDYDDSENGWTSD 444 (741)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~de~~d~~~~~~~~~~~~~~~~~ 444 (741)
.+|+++|.+++.+. .++++++ ++...+.+.....+.+++++++++++|||||+||++++....+
T Consensus 399 -------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dE~~~~~e~~~~~~~~k----- 464 (719)
T PLN00188 399 -------PPRIPVMVNMASAS--VSSKKNQKPQESSPSLDQTNAASRNSVMMDEDSDDDEEFQIPESEQEPETTK----- 464 (719)
T ss_pred -------cccceeeccccccc--ccccccccccccccccccccccchhhhhhccccccchhccCCCccccccccc-----
Confidence 78889998887432 2222222 1122233333444556888999999999999999876311000
Q ss_pred CCCCCCCCCCCCccccccccchhhhhhHHHhhcCcccccCCccCCCCc-cccCcccccCCCCCCCCceecCCCCceEEcc
Q 004624 445 FGPEMNSQDTRHPKISTAAGFVRKLHDLAVQKRGYVDLQGTAKEDNFS-CCYGTTLQKDPTCTLPCSWTSTDPSTFLIRG 523 (741)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~Ws~~~~~~F~VRG 523 (741)
. + +..+. ..+.+++.|+ ++|+|+|++++.+++.+||++|++++|+|||
T Consensus 465 ----~---~--------~~~~~----------------~~~~~~~~~d~~~~~g~l~~~~~~~~~ncWs~Pd~~~F~VRG 513 (719)
T PLN00188 465 ----N---E--------TKDTA----------------MEEEPQDKIDLSCFSGNLRRDDRDKARDCWRISDGNNFKVRS 513 (719)
T ss_pred ----c---c--------ccccc----------------cccCCcccccccccccccccCCCCCCCCCccCCCCcceEEcC
Confidence 0 0 00000 2345677788 9999999999999999999999999999999
Q ss_pred ccccccCcccccCCCceeEEEEEeeecCCcccccCCCCCCchhhhhhhcCCceEEEEEEEecCCCceeEEEEEeecCCCC
Q 004624 524 KNYLQDRHKVKAKGTLMQMVAADWLKSDKREDDLGGRPGGIVQKYAEQGGPEFFFIINIQVPGSTTYSLALYYMMTTPVK 603 (741)
Q Consensus 524 ~~Yl~dk~Kvpa~~~l~~lv~vD~f~s~~r~d~ia~~~~~~~~~~~~~~~~p~~~ivN~qvP~~p~~slV~Yf~~~~~~~ 603 (741)
+|||+||+|+||+++||+|+|||||++++|+||||+||+|++|.+.++ .||+|||||||||+|+||+|+||++++ +.
T Consensus 514 ~~Yl~Dk~KvPAg~~l~~lvgvDwfks~~ridhVa~r~~~~vq~a~~k--~~F~fiVNlQvPg~~~ys~V~Yf~~~~-l~ 590 (719)
T PLN00188 514 KNFCYDKSKIPAGKHLMDLVAVDWFKDTKRMDHVARRKGCAAQVAAEK--GLFSFVVNLQVPGSTHYSMVFYFVTKE-LV 590 (719)
T ss_pred CCcccCCccccCCccceeeEEEEEEcCCchhhHhhcCCCchhhhhccc--CCcEEEEEEEccCCCceEEEEEEeccC-CC
Confidence 999999999999999999999999999999999999999999987665 489999999999999999999999865 77
Q ss_pred CchhHHHhhcCCchhhccceecccccccCceeEeeecCCccEEeeeeeEEEEEeCCCEEEEEEEeCChHHHHHHHHHhhc
Q 004624 604 DAPLLESFINGDDAYRNSRFKLIPYISEGSWIVKQSVGKKACLIGQALEINYFHGKNYLELGVDIGSSTVARGVVSLVLG 683 (741)
Q Consensus 604 ~~~Ll~rf~~gdd~fRn~RfKlIp~v~~gpwivk~avg~kp~L~gk~~~~~y~~g~~YlEiDvDi~sS~vAr~v~~l~~g 683 (741)
+++||+||++|||+|||+||||||+|++||||||++||+|||||||+++|+||+|+||||||||||||+||++|++||+|
T Consensus 591 ~~sLl~rF~~GDD~fRnsRfKLIP~Iv~GpWiVk~aVG~~p~llGk~l~~~Y~~g~nylEvdvDi~ss~va~~v~~l~~g 670 (719)
T PLN00188 591 PGSLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIG 670 (719)
T ss_pred CchHHHHhccCchhHhhCceEEeccccCCceEEEeccCCcceEeeeecceeEecCCCeEEEEEeeccHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEEEeecCCccccccceeceEeecccCcccccccCCCC
Q 004624 684 YLNNLVIEMAFLIQANTEEELPEFLLGTCRLNHLDAAKAVLLKPSS 729 (741)
Q Consensus 684 ~~~~lvvD~af~Ieg~~~eELPE~lLG~~Rl~~~d~~~a~~~~~~~ 729 (741)
|+++|||||||+|||+++|||||+|||||||++||+++|+.+++..
T Consensus 671 ~~~~lvvD~af~ie~~~~eELPE~llG~~Rl~~i~~~~A~~~~~~~ 716 (719)
T PLN00188 671 VITTLVVDMAFLVQANTYEELPERLIGAVRVSHVELSSAIVPKLDP 716 (719)
T ss_pred hhhheEEEEEEEEecCChhhCchhheeeEEecccchhhccccCCCC
Confidence 9999999999999999999999999999999999999999877654
|
|
| >PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd08904 START_STARD6-like Lipid-binding START domain of mammalian STARD6 and related proteins | Back alignment and domain information |
|---|
| >cd08868 START_STARD1_3_like Cholesterol-binding START domain of mammalian STARD1, -3 and related proteins | Back alignment and domain information |
|---|
| >cd08873 START_STARD14_15-like Lipid-binding START domain of mammalian STARDT14, -15, and related proteins | Back alignment and domain information |
|---|
| >cd08914 START_STARD15-like Lipid-binding START domain of mammalian STARD15 and related proteins | Back alignment and domain information |
|---|
| >cd08906 START_STARD3-like Cholesterol-binding START domain of mammalian STARD3 and related proteins | Back alignment and domain information |
|---|
| >cd08869 START_RhoGAP C-terminal lipid-binding START domain of mammalian STARD8, -12, -13 and related proteins, which also have an N-terminal Rho GTPase-activating protein (RhoGAP) domain | Back alignment and domain information |
|---|
| >cd08913 START_STARD14-like Lipid-binding START domain of mammalian STARDT14 and related proteins | Back alignment and domain information |
|---|
| >cd08902 START_STARD4-like Lipid-binding START domain of mammalian STARD4 and related proteins | Back alignment and domain information |
|---|
| >cd08903 START_STARD5-like Lipid-binding START domain of mammalian STARD5 and related proteins | Back alignment and domain information |
|---|
| >cd08867 START_STARD4_5_6-like Lipid-binding START domain of mammalian STARD4, -5, -6, and related proteins | Back alignment and domain information |
|---|
| >cd08874 START_STARD9-like C-terminal START domain of mammalian STARD9, and related domains; lipid binding | Back alignment and domain information |
|---|
| >cd08909 START_STARD13-like C-terminal lipid-binding START domain of mammalian STARD13 and related proteins, which also have an N-terminal Rho GTPase-activating protein (RhoGAP) domain | Back alignment and domain information |
|---|
| >cd08907 START_STARD8-like C-terminal lipid-binding START domain of mammalian STARD8 and related proteins, which also have an N-terminal Rho GTPase-activating protein (RhoGAP) domain | Back alignment and domain information |
|---|
| >cd08905 START_STARD1-like Cholesterol-binding START domain of mammalian STARD1 and related proteins | Back alignment and domain information |
|---|
| >cd08871 START_STARD10-like Lipid-binding START domain of mammalian STARD10 and related proteins | Back alignment and domain information |
|---|
| >smart00234 START in StAR and phosphatidylcholine transfer protein | Back alignment and domain information |
|---|
| >PF01852 START: START domain; InterPro: IPR002913 START (StAR-related lipid-transfer) is a lipid-binding domain in StAR, HD-ZIP and signalling proteins [] | Back alignment and domain information |
|---|
| >cd08872 START_STARD11-like Ceramide-binding START domain of mammalian STARD11 and related domains | Back alignment and domain information |
|---|
| >cd08911 START_STARD7-like Lipid-binding START domain of mammalian STARD7 and related proteins | Back alignment and domain information |
|---|
| >cd08908 START_STARD12-like C-terminal lipid-binding START domain of mammalian STARD12 and related proteins, which also have an N-terminal Rho GTPase-activating protein (RhoGAP) domain | Back alignment and domain information |
|---|
| >cd00177 START Lipid-binding START domain of mammalian STARD1-STARD15 and related proteins | Back alignment and domain information |
|---|
| >cd08910 START_STARD2-like Lipid-binding START domain of mammalian STARD2 and related proteins | Back alignment and domain information |
|---|
| >cd08870 START_STARD2_7-like Lipid-binding START domain of mammalian STARD2, -7, and related proteins | Back alignment and domain information |
|---|
| >cd08876 START_1 Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
| >cd08877 START_2 Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family | Back alignment and domain information |
|---|
| >KOG2761 consensus START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd08875 START_ArGLABRA2_like C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd08864 SRPBCC_DUF3074 DUF3074, an uncharacterized ligand-binding domain of the SRPBCC domain superfamily | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms] | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd07813 COQ10p_like Coenzyme Q-binding protein COQ10p and similar proteins | Back alignment and domain information |
|---|
| >PF11274 DUF3074: Protein of unknown function (DUF3074) | Back alignment and domain information |
|---|
| >cd08866 SRPBCC_11 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A | Back alignment and domain information |
|---|
| >cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2200 consensus Tumour suppressor protein p122-RhoGAP/DLC1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd07819 SRPBCC_2 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd05018 CoxG Carbon monoxide dehydrogenase subunit G (CoxG) | Back alignment and domain information |
|---|
| >cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd08861 OtcD1_ARO-CYC_like N-terminal and C-terminal aromatase/cyclase domains of Streptomyces rimosus OtcD1 and related domains | Back alignment and domain information |
|---|
| >KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15408 PH_7: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >PLN02866 phospholipase D | Back alignment and domain information |
|---|
| >PF03364 Polyketide_cyc: Polyketide cyclase / dehydrase and lipid transport; InterPro: IPR005031 Members of this family of enzymes from Streptomyces spp | Back alignment and domain information |
|---|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >cd08860 TcmN_ARO-CYC_like N-terminal aromatase/cyclase domain of the multifunctional protein tetracenomycin (TcmN) and related domains | Back alignment and domain information |
|---|
| >cd07817 SRPBCC_8 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >cd07821 PYR_PYL_RCAR_like Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins | Back alignment and domain information |
|---|
| >cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK10724 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd07823 SRPBCC_5 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >KOG3845 consensus MLN, STAR and related lipid-binding proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01223 PH_Vav Vav pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd08865 SRPBCC_10 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >PF06240 COXG: Carbon monoxide dehydrogenase subunit G (CoxG); InterPro: IPR010419 The CO dehydrogenase structural genes coxMSL are flanked by nine accessory genes arranged as the cox gene cluster | Back alignment and domain information |
|---|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd07812 SRPBCC START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily | Back alignment and domain information |
|---|
| >cd07818 SRPBCC_1 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
| >PF10604 Polyketide_cyc2: Polyketide cyclase / dehydrase and lipid transport; InterPro: IPR019587 This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis | Back alignment and domain information |
|---|
| >KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd07824 SRPBCC_6 Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2 Length = 229 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-28
Identities = 27/212 (12%), Positives = 61/212 (28%), Gaps = 24/212 (11%)
Query: 162 HMEQVTADVIAPSPWTIFG-CQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIF 220
V + W + G ++ + + +E ++
Sbjct: 30 ATAVVDQILAQEENWKFEKNNEYGDTVYTIEVP-------FHGKTFILKTFLPCPAELVY 82
Query: 221 QTLMSLGASRSV-------GCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE 273
Q ++ + +++ ++ +T I + + + + RD + R R
Sbjct: 83 QEVILQPERMVLWNKTVTACQILQRVEDNTLISY-DVSAGAAGGVVSPRDFVNVRRIERR 141
Query: 274 DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPM-NHGKKSVVKHMLAIDWKCWRS 332
D Y+ + H P VR GG ++ ++ + +L D K
Sbjct: 142 RD-RYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGRL- 199
Query: 333 YLQPSSA--RSITIRMLGRVAALRELFRAKQG 362
P +S+ M LR+
Sbjct: 200 ---PRYLIHQSLAATMFEFAFHLRQRISELGA 228
|
| >3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens} Length = 221 | Back alignment and structure |
|---|
| >3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens} Length = 258 | Back alignment and structure |
|---|
| >2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens} Length = 231 | Back alignment and structure |
|---|
| >2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2 Length = 237 | Back alignment and structure |
|---|
| >1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2 Length = 224 | Back alignment and structure |
|---|
| >1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A* Length = 214 | Back alignment and structure |
|---|
| >2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A* Length = 255 | Back alignment and structure |
|---|
| >3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV} Length = 189 | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137 | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123 | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148 | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108 | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117 | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122 | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109 | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107 | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211 | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118 | Back alignment and structure |
|---|
| >4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Length = 173 | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 117 | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113 | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120 | Back alignment and structure |
|---|
| >2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 127 | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149 | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94 | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 130 | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Length = 125 | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125 | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103 | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Length = 164 | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126 | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126 | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 150 | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129 | Back alignment and structure |
|---|
| >2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Length = 126 | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 126 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228 | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112 | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130 | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109 | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129 | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 115 | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117 | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Length = 106 | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 741 | ||||
| d2psoa1 | 197 | d.129.3.2 (A:908-1104) Star-related lipid transfer | 4e-18 | |
| d1ln1a_ | 203 | d.129.3.2 (A:) Phosphatidylcholine transfer protei | 4e-15 | |
| d1em2a_ | 214 | d.129.3.2 (A:) Lipid transport domain of Mln64 {Hu | 6e-15 | |
| d1jssa_ | 199 | d.129.3.2 (A:) Cholesterol-regulated Start protein | 1e-11 | |
| d1upqa_ | 107 | b.55.1.1 (A:) Phosphoinositol 3-phosphate binding | 4e-07 | |
| d1x1ga1 | 116 | b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie | 5e-07 | |
| d1u5ea1 | 209 | b.55.1.1 (A:14-222) Src-associated adaptor protein | 2e-06 | |
| d2dyna_ | 111 | b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId | 2e-06 | |
| d1v5ua_ | 117 | b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M | 3e-06 | |
| d1v89a_ | 118 | b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI | 3e-06 | |
| d1eaza_ | 103 | b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: | 5e-06 | |
| d1plsa_ | 113 | b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta | 9e-06 | |
| d1v5pa_ | 126 | b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: | 9e-06 | |
| d1ntya2 | 121 | b.55.1.1 (A:1415-1535) Triple functional domain pr | 1e-05 | |
| d2i5fa1 | 104 | b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie | 1e-05 | |
| d1droa_ | 122 | b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila | 2e-05 | |
| d1unqa_ | 118 | b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H | 2e-05 | |
| d1btna_ | 106 | b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), | 3e-05 | |
| d1fgya_ | 127 | b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1 | 4e-05 | |
| d1faoa_ | 100 | b.55.1.1 (A:) Dual adaptor of phosphotyrosine and | 5e-05 | |
| d2elba2 | 101 | b.55.1.1 (A:274-374) DCC-interacting protein 13-al | 8e-05 | |
| d1u5da1 | 106 | b.55.1.1 (A:108-213) Src kinase-associated phospho | 8e-05 | |
| d2coda1 | 102 | b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo | 1e-04 | |
| d1u5fa1 | 111 | b.55.1.1 (A:109-219) Src-associated adaptor protei | 2e-04 | |
| d1v61a_ | 132 | b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (M | 2e-04 | |
| d1wi1a_ | 126 | b.55.1.1 (A:) Calcium-dependent activator protein | 3e-04 | |
| d1wgqa_ | 109 | b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin | 3e-04 | |
| d2dfka2 | 162 | b.55.1.1 (A:240-401) Rho guanine nucleotide exchan | 5e-04 | |
| d1v5ma_ | 136 | b.55.1.1 (A:) SH2 and PH domain-containing adapter | 0.001 | |
| d1btka_ | 169 | b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Hom | 0.001 | |
| d2cofa1 | 95 | b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) | 0.002 | |
| d2fjla1 | 101 | b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phosph | 0.002 | |
| d2j59m1 | 133 | b.55.1.1 (M:931-1063) Rho GTPase-activating protei | 0.003 | |
| d1ki1b2 | 142 | b.55.1.1 (B:1439-1580) GEF of intersectin {Human ( | 0.004 |
| >d2psoa1 d.129.3.2 (A:908-1104) Star-related lipid transfer protein 13 {Human (Homo sapiens) [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: TBP-like superfamily: Bet v1-like family: STAR domain domain: Star-related lipid transfer protein 13 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.2 bits (200), Expect = 4e-18
Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 18/189 (9%)
Query: 176 WTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRSVGC- 234
W + L + G+ K A V+ + ++
Sbjct: 21 WVTCSSTDNTDLAFKKVGDGNPLK-----LWKASVEVEAPPSVVLNRVLRERHLWDEDFV 75
Query: 235 ---VVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRR-EDDGTYVILYHSVFHKKC 290
VVE LD T+I L RD ++ R W+ G ++ SV H++
Sbjct: 76 QWKVVETLDRQTEIYQYVL---NSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA 132
Query: 291 PRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRV 350
G VRA + Y+I P G KS + H+ ID K ++ V
Sbjct: 133 QLLGG-VRAVVMDSQYLIEPCGSG-KSRLTHICRIDLKGH---SPEWYSKGFGHLCAAEV 187
Query: 351 AALRELFRA 359
A +R F+
Sbjct: 188 ARIRNSFQP 196
|
| >d1ln1a_ d.129.3.2 (A:) Phosphatidylcholine transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 203 | Back information, alignment and structure |
|---|
| >d1em2a_ d.129.3.2 (A:) Lipid transport domain of Mln64 {Human (Homo sapiens) [TaxId: 9606]} Length = 214 | Back information, alignment and structure |
|---|
| >d1jssa_ d.129.3.2 (A:) Cholesterol-regulated Start protein 4 (Stard4). {Mouse (Mus musculus) [TaxId: 10090]} Length = 199 | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107 | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116 | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117 | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126 | Back information, alignment and structure |
|---|
| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Length = 121 | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 | Back information, alignment and structure |
|---|
| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122 | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106 | Back information, alignment and structure |
|---|
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Length = 101 | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106 | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111 | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Length = 132 | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109 | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 162 | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 169 | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101 | Back information, alignment and structure |
|---|
| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} Length = 142 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 741 | |||
| d2psoa1 | 197 | Star-related lipid transfer protein 13 {Human (Hom | 100.0 | |
| d1em2a_ | 214 | Lipid transport domain of Mln64 {Human (Homo sapie | 99.97 | |
| d1jssa_ | 199 | Cholesterol-regulated Start protein 4 (Stard4). {M | 99.97 | |
| d1ln1a_ | 203 | Phosphatidylcholine transfer protein {Human (Homo | 99.96 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 99.58 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 99.52 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 99.52 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 99.5 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 99.48 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 99.48 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 99.47 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 99.47 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 99.46 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 99.46 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 99.45 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 99.44 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 99.42 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 99.4 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 99.4 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 99.38 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.38 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 99.37 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 99.37 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 99.35 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 99.33 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 99.3 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 99.29 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 99.29 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 99.27 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 99.26 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 99.24 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 99.24 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 99.22 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 99.21 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 99.16 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 99.16 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 98.39 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 98.35 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 97.78 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 97.49 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 97.36 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 97.23 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 97.15 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 97.08 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 96.85 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 96.84 | |
| d2d4ra1 | 146 | Hypothetical protein TTHA0849 {Thermus thermophilu | 96.54 | |
| d2rera1 | 155 | Multifunctional enzyme TcmN, cyclase/aromatase dom | 96.0 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 95.14 | |
| d1t17a_ | 148 | Hypothetical protein CC1736 {Caulobacter crescentu | 93.66 | |
| d2pcsa1 | 147 | Hypothetical protein GKP20 {Geobacillus kaustophil | 92.51 | |
| d2ns9a1 | 147 | Hypothetical protein APE2225 {Aeropyrum pernix [Ta | 92.1 | |
| d3cnwa1 | 138 | Uncharacterized protein XoxI {Bacillus cereus [Tax | 83.92 |
| >d2psoa1 d.129.3.2 (A:908-1104) Star-related lipid transfer protein 13 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: TBP-like superfamily: Bet v1-like family: STAR domain domain: Star-related lipid transfer protein 13 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-31 Score=215.39 Aligned_cols=172 Identities=23% Similarity=0.291 Sum_probs=146.0
Q ss_pred CCCCCEEEEEECCEEEEEECC-CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHC----CCCCEEEEEEEEEECCCEEEE
Q ss_conf 699968998528919998513-789888789965799999925889999999843----999701989988424935999
Q 004624 172 APSPWTIFGCQNGLRLFKEGK-DRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMS----LGASRSVGCVVEHLDGHTDII 246 (741)
Q Consensus 172 a~s~Wkl~~~~nGIrVf~~~~-~~~~~~~~~~~~~~Ka~gvVdaspe~VfevL~d----~d~~R~e~~vIE~iD~~tdIv 246 (741)
...||+...+++|++||.+.. ++ +..+++|+++.|+++|++|+..+++ |+....++++||++|++++|+
T Consensus 17 ~~~GW~~~~~~~gi~V~~kk~~~g------s~~~~~k~~~~i~a~~~~vl~~~l~~r~~Wd~~~~~~~~le~~~~~~~i~ 90 (197)
T d2psoa1 17 KFKGWVTCSSTDNTDLAFKKVGDG------NPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIY 90 (197)
T ss_dssp HCCSCEEECCSSSCEEEEECCCSS------CCCCEEEEEEEESSCHHHHHHHHHHCGGGTCTTBCCCEEEEEEETTEEEE
T ss_pred CCCCCEEEECCCCEEEEEEECCCC------CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE
T ss_conf 279956985279869999756799------97589999999858999999999873987764412589999918997999
Q ss_pred EEEEECCCCCCCCCCCEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEE
Q ss_conf 998406989999999708999999985-9982999997037999999999176897063599996599980299999946
Q 004624 247 HKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAI 325 (741)
Q Consensus 247 Y~~~~~~~~P~~vspRDFV~lR~wrr~-~DGsYVI~~~SV~Hp~~Pp~~G~VRaei~~sGyvI~Pl~~~~~s~VT~i~qv 325 (741)
|+.+.+ ||++++||||+++.|++. ++|.+++..+|+.|+.+|+ +++||+.+..+||+|+|.+++ +|+|||++++
T Consensus 91 y~~~~~---p~pvs~RD~v~~~~~~~~~~~~~~~i~~~Sv~~~~~p~-~~~VR~~~~~~~~~i~p~~~~-~t~vt~~~~~ 165 (197)
T d2psoa1 91 QYVLNS---MAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQL-LGGVRAVVMDSQYLIEPCGSG-KSRLTHICRI 165 (197)
T ss_dssp EEEECC---SSSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCC-CSSEECCEEEEEEEEEECSTT-CEEEEEEEEE
T ss_pred EEECCC---CCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCC-CCCEEEEEEECCEEEEECCCC-CEEEEEEEEE
T ss_conf 998558---87635506999999999579987999997035567888-884899998132799989999-6899999997
Q ss_pred ECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 368862355-666225689999999999999998
Q 004624 326 DWKCWRSYL-QPSSARSITIRMLGRVAALRELFR 358 (741)
Q Consensus 326 DlkGwip~~-~~~~~~~~~~~mL~~Va~LRe~~~ 358 (741)
||+||+|.| ++.|.+.++. .+..||+.|+
T Consensus 166 Dp~G~iP~W~~n~~~~~~~~----~~~~lr~~f~ 195 (197)
T d2psoa1 166 DLKGHSPEWYSKGFGHLCAA----EVARIRNSFQ 195 (197)
T ss_dssp CCSSSCTTTTTTHHHHHHHH----HHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_conf 78986746577525789999----9999987611
|
| >d1em2a_ d.129.3.2 (A:) Lipid transport domain of Mln64 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jssa_ d.129.3.2 (A:) Cholesterol-regulated Start protein 4 (Stard4). {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ln1a_ d.129.3.2 (A:) Phosphatidylcholine transfer protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2d4ra1 d.129.3.6 (A:2-147) Hypothetical protein TTHA0849 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2rera1 d.129.3.6 (A:1-155) Multifunctional enzyme TcmN, cyclase/aromatase domain {Streptomyces glaucescens [TaxId: 1907]} | Back information, alignment and structure |
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| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
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| >d1t17a_ d.129.3.6 (A:) Hypothetical protein CC1736 {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
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| >d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]} | Back information, alignment and structure |
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| >d2ns9a1 d.129.3.10 (A:10-156) Hypothetical protein APE2225 {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
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| >d3cnwa1 d.129.3.8 (A:3-140) Uncharacterized protein XoxI {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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