Citrus Sinensis ID: 004635

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740

MVGKTESQNGAVKATAAPAMNLESDLFSNFSFKSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKTAVAGSSKGTGGSKASSKASFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPNNRW

ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccccccHHHHHHHHHHHHccccccccEEcccccHHHHHccccEEEEccccccccHHHHHHHHHcccHHHHHHHHHHccccEEEEEEccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEcccccccEEcccccccccccccccccccEEEEcccEEEEEEEccccccc

ccccccccccccccccccccccHHHHHcccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHcccccccccccEccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccEEccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccHHHHccccEEEEccccccccHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccEEHccHHHHHHHHHHccccccEEEEEHHcccEEEccccccEEEEcccccccHHHHHHHHccccHHHHHHHHHHccccEEEEEEccEccccccHHHHHHHHHHHccccccccccccccccccEEEcccccHHHHHHHHHHEEEHccccccccccccccccccccEEcccccccccHEHHHEccccEEEEEEEEccccccc

mvgktesqngavkataapamnlesdlfsnfsfksfklKTKQQELLLRVSILGLVYILAFITRLFSVLRYESmihefdpyfnyrttlfLTEKGFYEFWnwfdseswyplgriiggtlypgLMVTAAFIYWTLRFLRFAVHIREVcvltapffasnTTVVAYFFGKEIWDSGAGLVAAAFIAICpgyisrsvagsydnEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGfqhvqsgeHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVgtasgyispwtgrfyslldptyakdnipiiasvsehqptawssfmFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTksktavagsskgtggskasskasfdqsqpfqkNGAIALLLGAFYLLSKYAThctwvtseaysspsIVLAARgahgnrvifDDYREAYFWLRqntppdakvmswWDYGYQITAMGNRTVivdnntwnnthIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGvtgyssddINKFLWMVRIgggvfpvikepdylvngdyrvdkgaapKMLNCLMYKLSYYRFGElvteygkppgydrargveignkdikLEHLEEAFTTSNWIVRIYkvkppnnrw

mvgktesqngavkataapamnLESDLFSNFSFKSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLlrtksktavagsskgtggskasskasFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHleeafttsnwivriykvkppnnrw

MVGKTESQNGAVKATAAPAMNLEsdlfsnfsfksfklktkQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTsaiavgalalgvgtasgYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKTAVagsskgtggskasskasFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPNNRW

************************DLFSNFSFKSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLL**********************************NGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKV*******

***************************************KQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKT****************KASFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPP****

************KATAAPAMNLESDLFSNFSFKSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTK**************************QPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPNNRW

********************************KSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLL*****************************QPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPP****

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		740	2.2.26 [Sep-21-2011]
Q9FX21		735	Dolichyl-diphosphooligosa	yes	no	0.991	0.998	0.890	0.0
Q7XQ88		721	Dolichyl-diphosphooligosa	yes	no	0.955	0.980	0.871	0.0
Q54NM9		714	Dolichyl-diphosphooligosa	yes	no	0.914	0.948	0.623	0.0
Q5RCE2		705	Dolichyl-diphosphooligosa	yes	no	0.928	0.974	0.601	0.0
P46977		705	Dolichyl-diphosphooligosa	yes	no	0.928	0.974	0.601	0.0
P46978		705	Dolichyl-diphosphooligosa	yes	no	0.924	0.970	0.602	0.0
Q2KJI2		705	Dolichyl-diphosphooligosa	yes	no	0.929	0.975	0.599	0.0
Q3TDQ1		823	Dolichyl-diphosphooligosa	no	no	0.937	0.843	0.572	0.0
Q8TCJ2		826	Dolichyl-diphosphooligosa	no	no	0.935	0.837	0.569	0.0
P46975		757	Dolichyl-diphosphooligosa	yes	no	0.928	0.907	0.542	0.0

>sp\|Q9FX21\|STT3B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Arabidopsis thaliana GN=STT3B PE=1 SV=1	Back alignment and function desciption

 Score = 1333 bits (3450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/739 (89%), Positives = 692/739 (93%), Gaps = 5/739 (0%)

Query: 1   MVGKTESQNGAVKATAAPAMNLESDLFSNFSFKSFKLKTKQQELLLRVSILGLVYILAFI 60
           M GK+E       AT    +N      S FSFKS KLKTKQQELLLR+SILGLVYILAFI
Sbjct: 1   MGGKSEPAKSESMATKPDLLNT-----SFFSFKSLKLKTKQQELLLRISILGLVYILAFI 55

Query: 61  TRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGL 120
            RLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGL
Sbjct: 56  ARLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGL 115

Query: 121 MVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIA 180
           MVTAA IYWTLRFLRF VHIREVCVLTAPFFASNTT+VAYFFGKE+WD+GAGLVAA  IA
Sbjct: 116 MVTAALIYWTLRFLRFFVHIREVCVLTAPFFASNTTLVAYFFGKELWDTGAGLVAAVLIA 175

Query: 181 ICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGY 240
           ICPGYISRSVAGSYDNE VAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGY
Sbjct: 176 ICPGYISRSVAGSYDNEAVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGY 235

Query: 241 VFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMG 300
           VFIINL+PLYVLVLLITGRYSMRLY+AYNCMY+LGMLLAMQIRFVGFQHVQSGEHM AMG
Sbjct: 236 VFIINLVPLYVLVLLITGRYSMRLYIAYNCMYILGMLLAMQIRFVGFQHVQSGEHMGAMG 295

Query: 301 VFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYISPWTGRFY 360
           VF LMQVFYFLDWVKY L+DTKLFQ FLRITVTSAI VG +A+GVGTASGYISPWTGRFY
Sbjct: 296 VFLLMQVFYFLDWVKYQLNDTKLFQTFLRITVTSAILVGGVAVGVGTASGYISPWTGRFY 355

Query: 361 SLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVM 420
           SLLDPTYAKD+IPIIASVSEHQPTAWSSFMFD+HILLFLFPAGLYFCFK+L+DATIFIVM
Sbjct: 356 SLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDYHILLFLFPAGLYFCFKRLTDATIFIVM 415

Query: 421 YGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKTAVAGSSKGTGGS 480
           YGLTS+YFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTK K +  GS+KG G S
Sbjct: 416 YGLTSLYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKQKVSQTGSTKGAGSS 475

Query: 481 KASSKASFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGN 540
           KASSK + DQSQPFQKNGAIALL+G FYLLS+YA HCTWVT+EAYSSPSIVLAARGAHGN
Sbjct: 476 KASSKVTLDQSQPFQKNGAIALLVGVFYLLSRYAIHCTWVTAEAYSSPSIVLAARGAHGN 535

Query: 541 RVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRA 600
           R+IFDDYREAY+WLRQNT  DAK+MSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRA
Sbjct: 536 RIIFDDYREAYYWLRQNTATDAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRA 595

Query: 601 MSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVN 660
           MSSYED+AY+IMRSLDV+YVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVN
Sbjct: 596 MSSYEDDAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVN 655

Query: 661 GDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEA 720
           G++RVDKGA+PKMLNCLMYKL YYRFGEL TEYGKPPGYDRARGVEIGNKDIKLEHLEEA
Sbjct: 656 GEFRVDKGASPKMLNCLMYKLCYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEHLEEA 715

Query: 721 FTTSNWIVRIYKVKPPNNR 739
           +TTSNWIVRIY+VKPP NR
Sbjct: 716 YTTSNWIVRIYRVKPPTNR 734

Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). SST3A seems to be involved in complex substrate specificity.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8

>sp\|Q7XQ88\|STT3B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Oryza sativa subsp. japonica GN=STT3B PE=2 SV=2	Back alignment and function description

>sp\|Q54NM9\|STT3_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Dictyostelium discoideum GN=stt3 PE=3 SV=1	Back alignment and function description

>sp\|Q5RCE2\|STT3A_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Pongo abelii GN=STT3A PE=2 SV=1	Back alignment and function description

>sp\|P46977\|STT3A_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Homo sapiens GN=STT3A PE=1 SV=2	Back alignment and function description

>sp\|P46978\|STT3A_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Mus musculus GN=Stt3a PE=1 SV=1	Back alignment and function description

>sp\|Q2KJI2\|STT3A_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Bos taurus GN=STT3A PE=2 SV=1	Back alignment and function description

>sp\|Q3TDQ1\|STT3B_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2	Back alignment and function description

>sp\|Q8TCJ2\|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1	Back alignment and function description

>sp\|P46975\|STT3_CAEEL Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Caenorhabditis elegans GN=T12A2.2 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		740
449439509		747	PREDICTED: dolichyl-diphosphooligosaccha	1.0	0.990	0.914	0.0
359491801		741	PREDICTED: dolichyl-diphosphooligosaccha	1.0	0.998	0.914	0.0
224120506		721	predicted protein [Populus trichocarpa]	0.945	0.970	0.945	0.0
297846394		738	hypothetical protein ARALYDRAFT_891007 [	0.995	0.998	0.894	0.0
224125662		721	predicted protein [Populus trichocarpa]	0.944	0.969	0.918	0.0
30693010		735	dolichyl-diphosphooligosaccharide--prote	0.991	0.998	0.890	0.0
356560025		733	PREDICTED: dolichyl-diphosphooligosaccha	0.975	0.984	0.893	0.0
356531038		729	PREDICTED: dolichyl-diphosphooligosaccha	0.967	0.982	0.899	0.0
357499709		727	Dolichyl-diphosphooligosaccharide-protei	0.978	0.995	0.887	0.0
255546900		752	oligosaccharyl transferase, putative [Ri	0.889	0.875	0.928	0.0

>gi\|449439509\|ref\|XP_004137528.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Cucumis sativus] gi\|449503079\|ref\|XP_004161825.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Cucumis sativus]	Back alignment and taxonomy information

 Score = 1408 bits (3645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/747 (91%), Positives = 707/747 (94%), Gaps = 7/747 (0%)

Query: 1   MVGKTESQNGAVKA-------TAAPAMNLESDLFSNFSFKSFKLKTKQQELLLRVSILGL 53
           M GK E  NG+VK+       +A    N +S L  +FSFKSFKLKTKQQELL+RVSIL L
Sbjct: 1   MGGKIEPVNGSVKSGSNNQTNSATITSNAKSGLLDSFSFKSFKLKTKQQELLIRVSILFL 60

Query: 54  VYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIG 113
           VY+LAFITRLFSVLRYESMIHEFDPYFNYRTTLFLT+KGFYEFWNWFDSESWYPLGRIIG
Sbjct: 61  VYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTQKGFYEFWNWFDSESWYPLGRIIG 120

Query: 114 GTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGL 173
           GTLYPGLMVTAA IYW LRFL+FAVHIREVCVLTAPFFASNTT+VAYFFGKEIWDSGAGL
Sbjct: 121 GTLYPGLMVTAAIIYWGLRFLKFAVHIREVCVLTAPFFASNTTLVAYFFGKEIWDSGAGL 180

Query: 174 VAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYM 233
           VAAA IAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYM
Sbjct: 181 VAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYM 240

Query: 234 VSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSG 293
           VSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMY+LGMLLAMQIRFVGFQHVQSG
Sbjct: 241 VSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYILGMLLAMQIRFVGFQHVQSG 300

Query: 294 EHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTASGYIS 353
           EHMAAMGVFFL+QVFYFLDWVKYMLSDTKLFQAFL+ITVTSA+AVG +ALGVGTASGYIS
Sbjct: 301 EHMAAMGVFFLIQVFYFLDWVKYMLSDTKLFQAFLKITVTSAVAVGTVALGVGTASGYIS 360

Query: 354 PWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSD 413
           PWTGRFYSLLDPTYAKD+IPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFK+LSD
Sbjct: 361 PWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSD 420

Query: 414 ATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKTAVAGS 473
           ATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLT LLR K K +   S
Sbjct: 421 ATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTQLLRAKPKVSQISS 480

Query: 474 SKGTGGSKASSKASFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWVTSEAYSSPSIVLA 533
           SKG   +K+ SK S DQSQPFQKNGAIALL GAFYLLSKYATHCTWVTSEAYSSPSIVLA
Sbjct: 481 SKGVSNAKSFSKGSLDQSQPFQKNGAIALLFGAFYLLSKYATHCTWVTSEAYSSPSIVLA 540

Query: 534 ARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTH 593
           ARGAHGNRVIFDDYREAYFWLRQNTP DAK+MSWWDYGYQITAMGNRTVIVDNNTWNNTH
Sbjct: 541 ARGAHGNRVIFDDYREAYFWLRQNTPQDAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTH 600

Query: 594 IATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIK 653
           IATVGRAMSSYE EAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIK
Sbjct: 601 IATVGRAMSSYEGEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIK 660

Query: 654 EPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIK 713
           EPDYLVNG+YRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPG+DRARGVEIGNKDIK
Sbjct: 661 EPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGFDRARGVEIGNKDIK 720

Query: 714 LEHLEEAFTTSNWIVRIYKVKPPNNRW 740
           LEHLEEAFTTSNWIVRIY+VKPPNNRW
Sbjct: 721 LEHLEEAFTTSNWIVRIYRVKPPNNRW 747

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359491801\|ref\|XP_002269119.2\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224120506\|ref\|XP_002318345.1\| predicted protein [Populus trichocarpa] gi\|222859018\|gb\|EEE96565.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297846394\|ref\|XP_002891078.1\| hypothetical protein ARALYDRAFT_891007 [Arabidopsis lyrata subsp. lyrata] gi\|297336920\|gb\|EFH67337.1\| hypothetical protein ARALYDRAFT_891007 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|224125662\|ref\|XP_002329687.1\| predicted protein [Populus trichocarpa] gi\|222870595\|gb\|EEF07726.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi|30693010|ref|NP_174675.2| dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabidopsis thaliana] gi|75172950|sp|Q9FX21.1|STT3B_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B; Short=Oligosaccharyl transferase subunit STT3B; Short=STT3-B; AltName: Full=Protein STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B gi|10086464|gb|AAG12524.1|AC015446_5 Putative integral membrane protein [Arabidopsis thaliana] gi|332193554|gb|AEE31675.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|356560025\|ref\|XP_003548296.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Glycine max]	Back alignment and taxonomy information

>gi\|356531038\|ref\|XP_003534085.1\| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like [Glycine max]	Back alignment and taxonomy information

>gi\|357499709\|ref\|XP_003620143.1\| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A [Medicago truncatula] gi\|355495158\|gb\|AES76361.1\| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A [Medicago truncatula]	Back alignment and taxonomy information

>gi\|255546900\|ref\|XP_002514508.1\| oligosaccharyl transferase, putative [Ricinus communis] gi\|223546407\|gb\|EEF47908.1\| oligosaccharyl transferase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		740
TAIR\|locus:2009051		735	STT3B "staurosporin and temper	0.944	0.951	0.881	0.0
DICTYBASE\|DDB_G0285159		714	stt3 "dolichyl-diphosphooligos	0.572	0.593	0.614	9.9e-240
ZFIN\|ZDB-GENE-021015-3		705	itm1 "integral membrane protei	0.918	0.964	0.603	1.9e-232
UNIPROTKB\|Q5ZLA7		705	LOC100857165 "Uncharacterized	0.918	0.964	0.603	4e-232
UNIPROTKB\|Q5U4M7		705	stt3a "Itm1 protein" [Xenopus	0.920	0.965	0.607	4e-232
UNIPROTKB\|Q6NX25		705	stt3a "Integral membrane prote	0.920	0.965	0.603	1.1e-231
UNIPROTKB\|F6VFF2		718	STT3A "Uncharacterized protein	0.918	0.947	0.602	1.7e-231
UNIPROTKB\|P46977		705	STT3A "Dolichyl-diphosphooligo	0.918	0.964	0.601	2.8e-231
UNIPROTKB\|F6QL03		705	STT3A "Dolichyl-diphosphooligo	0.918	0.964	0.601	2.8e-231
UNIPROTKB\|F7DU72		705	STT3A "Uncharacterized protein	0.918	0.964	0.601	2.8e-231

TAIR\|locus:2009051 STT3B "staurosporin and temperature sensitive 3-like b" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3296 (1165.3 bits), Expect = 0., P = 0.
 Identities = 616/699 (88%), Positives = 644/699 (92%)

Query:    41 QQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWF 100
             QQELLLR+SILGLVYILAFI RLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWF
Sbjct:    36 QQELLLRISILGLVYILAFIARLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWF 95

Query:   101 DSESWYPLGRIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAY 160
             DSESWYPLGRIIGGTLYPGLMVTAA IYWTLRFLRF VHIREVCVLTAPFFASNTT+VAY
Sbjct:    96 DSESWYPLGRIIGGTLYPGLMVTAALIYWTLRFLRFFVHIREVCVLTAPFFASNTTLVAY 155

Query:   161 FFGKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSL 220
             FFGKE+WD+GAGLVAA  IAICPGYISRSVAGSYDNE VAIFALLLTFYLFVKAVNTGSL
Sbjct:   156 FFGKELWDTGAGLVAAVLIAICPGYISRSVAGSYDNEAVAIFALLLTFYLFVKAVNTGSL 215

Query:   221 AWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLLAM 280
             AWALASAFGYFYMVSAWGGYVFIINL+PLYVLVLLITGRYSMRLY+AYNCMY+LGMLLAM
Sbjct:   216 AWALASAFGYFYMVSAWGGYVFIINLVPLYVLVLLITGRYSMRLYIAYNCMYILGMLLAM 275

Query:   281 QIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTXXXXXXX 340
             QIRFVGFQHVQSGEHM AMGVF LMQVFYFLDWVKY L+DTKLFQ FLRITVT       
Sbjct:   276 QIRFVGFQHVQSGEHMGAMGVFLLMQVFYFLDWVKYQLNDTKLFQTFLRITVTSAILVGG 335

Query:   341 XXXXXXXXXXYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLF 400
                       YISPWTGRFYSLLDPTYAKD+IPIIASVSEHQPTAWSSFMFD+HILLFLF
Sbjct:   336 VAVGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDYHILLFLF 395

Query:   401 PAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTS 460
             PAGLYFCFK+L+DATIFIVMYGLTS+YFAGVMVRLILVATPAVCLISAIAVSATIKNLTS
Sbjct:   396 PAGLYFCFKRLTDATIFIVMYGLTSLYFAGVMVRLILVATPAVCLISAIAVSATIKNLTS 455

Query:   461 LLRTKSKTAVXXXXXXXXXXXXXXXXXFDQSQPFQKNGAIALLLGAFYLLSKYATHCTWV 520
             LLRTK K +                   DQSQPFQKNGAIALL+G FYLLS+YA HCTWV
Sbjct:   456 LLRTKQKVSQTGSTKGAGSSKASSKVTLDQSQPFQKNGAIALLVGVFYLLSRYAIHCTWV 515

Query:   521 TSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNR 580
             T+EAYSSPSIVLAARGAHGNR+IFDDYREAY+WLRQNT  DAK+MSWWDYGYQITAMGNR
Sbjct:   516 TAEAYSSPSIVLAARGAHGNRIIFDDYREAYYWLRQNTATDAKIMSWWDYGYQITAMGNR 575

Query:   581 TVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLW 640
             TVIVDNNTWNNTHIATVGRAMSSYED+AY+IMRSLDV+YVLVVFGGVTGYSSDDINKFLW
Sbjct:   576 TVIVDNNTWNNTHIATVGRAMSSYEDDAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLW 635

Query:   641 MVRIGGGVFPVIKEPDYLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYD 700
             MVRIGGGVFPVIKEPDYLVNG++RVDKGA+PKMLNCLMYKL YYRFGEL TEYGKPPGYD
Sbjct:   636 MVRIGGGVFPVIKEPDYLVNGEFRVDKGASPKMLNCLMYKLCYYRFGELTTEYGKPPGYD 695

Query:   701 RARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPNNR 739
             RARGVEIGNKDIKLEHLEEA+TTSNWIVRIY+VKPP NR
Sbjct:   696 RARGVEIGNKDIKLEHLEEAYTTSNWIVRIYRVKPPTNR 734

GO:0004576 "oligosaccharyl transferase activity" evidence=IEA;ISS

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

DICTYBASE\|DDB_G0285159 stt3 "dolichyl-diphosphooligosaccharide-protein glycotransferase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-021015-3 itm1 "integral membrane protein 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZLA7 LOC100857165 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5U4M7 stt3a "Itm1 protein" [Xenopus laevis (taxid:8355)]	Back alignment and assigned GO terms

UNIPROTKB\|Q6NX25 stt3a "Integral membrane protein 1" [Xenopus (Silurana) tropicalis (taxid:8364)]	Back alignment and assigned GO terms

UNIPROTKB\|F6VFF2 STT3A "Uncharacterized protein" [Monodelphis domestica (taxid:13616)]	Back alignment and assigned GO terms

UNIPROTKB\|P46977 STT3A "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F6QL03 STT3A "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A" [Macaca mulatta (taxid:9544)]	Back alignment and assigned GO terms

UNIPROTKB\|F7DU72 STT3A "Uncharacterized protein" [Callithrix jacchus (taxid:9483)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P39007	STT3_YEAST	2, ., 4, ., 1, ., 1, 1, 9	0.4921	0.9081	0.9359	yes	no
Q7XQ88	STT3B_ORYSJ	2, ., 4, ., 9, 9, ., 1, 8	0.8714	0.9554	0.9805	yes	no
P46975	STT3_CAEEL	No assigned EC number	0.5428	0.9283	0.9075	yes	no
P46977	STT3A_HUMAN	2, ., 4, ., 1, ., 1, 1, 9	0.6016	0.9283	0.9744	yes	no
P46978	STT3A_MOUSE	2, ., 4, ., 1, ., 1, 1, 9	0.6027	0.9243	0.9702	yes	no
Q2KJI2	STT3A_BOVIN	2, ., 4, ., 1, ., 1, 1, 9	0.5991	0.9297	0.9758	yes	no
Q5RCE2	STT3A_PONAB	2, ., 4, ., 1, ., 1, 1, 9	0.6016	0.9283	0.9744	yes	no
Q9FX21	STT3B_ARATH	2, ., 4, ., 9, 9, ., 1, 8	0.8903	0.9918	0.9986	yes	no
Q54NM9	STT3_DICDI	2, ., 4, ., 1, ., 1, 1, 9	0.6237	0.9148	0.9481	yes	no
O94335	STT3_SCHPO	2, ., 4, ., 1, ., 1, 1, 9	0.5027	0.9459	0.9308	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.976
4th Layer	2.4.1.119	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		740
pfam02516		650	pfam02516, STT3, Oligosaccharyl transferase STT3 s	1e-153
COG1287		773	COG1287, COG1287, Uncharacterized membrane protein	5e-82
TIGR04154		815	TIGR04154, archaeo_STT3, oligosaccharyl transferas	2e-35
pfam13231		158	pfam13231, PMT_2, Dolichyl-phosphate-mannose-prote	6e-04
COG1807		535	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transfe	0.004
pfam02366		244	pfam02366, PMT, Dolichyl-phosphate-mannose-protein	0.004

>gnl\|CDD\|217079 pfam02516, STT3, Oligosaccharyl transferase STT3 subunit	Back alignment and domain information

 Score =  461 bits (1187), Expect = e-153
 Identities = 227/668 (33%), Positives = 325/668 (48%), Gaps = 39/668 (5%)

Query: 45  LLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSES 104
           LL+V I  L+  +A  +RLF+  R     HEFDPY+NYR T  L  +GFY    W D  +
Sbjct: 1   LLKVVIFALIAGVAIFSRLFTDTRGLPYFHEFDPYYNYRLTENLLNEGFYPGGIWDDHSA 60

Query: 105 WYPLG-RIIGGTLYPGL-MVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFF 162
           +YP G R+    L P L M     I+  L F      +REVC    P       +  Y  
Sbjct: 61  YYPPGSRVDYPPLLPYLTMALYGIIFLFLPF-----SLREVCFWLPPVIGGLLGIATYLL 115

Query: 163 GKEIWDSGAGLVAAAFIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGS--L 220
            +E+ +  AGL+AA  +AI PGY+SR+VAG YD + +AIF  LL  + ++ A+ TGS  +
Sbjct: 116 VRELKNDLAGLIAAFLLAIAPGYVSRTVAGFYDTDMLAIFLPLLVLFFWLLAIKTGSNRI 175

Query: 221 AWALASAFGYFYMVSAWGGY-VFIINLIPLYVLVLLITGRYSMRLYVAYNCMYVLGMLL- 278
            +A+ +    F M  AWGGY VF++ L  L++L LLI GR+  +L +     Y++  ++ 
Sbjct: 176 IYAVLAGLPLFLMALAWGGYQVFLLILALLFILALLIMGRFEPKLLILVGFSYLIATIVG 235

Query: 279 -AMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIA 337
             +Q  FVGF  V+S EHM A  VF L Q+  F   VK +      F+      +   + 
Sbjct: 236 GIIQYLFVGFAKVRSSEHMGAFLVFGLAQLLAFGSVVKGVYLSFYQFETLTYPGLFLVLG 295

Query: 338 VGALALGVGTASGYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILL 397
           +    L +    G+I+ WTGRFYSL D   AK +IP I  +SE QPT   + +     L+
Sbjct: 296 LIGPVLFLLGLLGFIALWTGRFYSLFDY--AKIDIPTIILISEWQPTGLYALLAGLRFLI 353

Query: 398 FLFPAGLYFCFKKLSDATIFIVMYGLTSMYFAGVMVRLI-LVATPAVCLISAIAVSATI- 455
           F FP GL FC   L D  +F  +Y ++ + F GVMV  I L   P + LI+A   S    
Sbjct: 354 FTFPLGLIFCGLLLEDLAVFSFIYSVSQLRFLGVMVFPIMLTLAPVIALIAAYLASPIFS 413

Query: 456 ---KNLTSLLRTKSKTAVAGSSKGTGGSKASSKASFDQSQPFQKNGAIALLLGAFYLLSK 512
              +   ++ R  +  A    ++G          + D          + +    +     
Sbjct: 414 TYLEEEAAIRRAAAGVAAPEKNEGWERGLEWVNTNRD---------TVVITWWDYGHFFA 464

Query: 513 YATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPD-AKVMSWWDYG 571
           Y      VT +  SSP +VL     +    + DD  EAY  L  N+  D + V SWWDYG
Sbjct: 465 YF-ADRPVTFDGGSSP-VVLGTPRGYWALTLMDDNNEAYLSLGINSMLDTSGVKSWWDYG 522

Query: 572 YQITAMGNRTVIVDNNTWNN-THIATVGRAMSS---YEDEAYEIMRSLDVDYVLVVFGGV 627
            QI  +  R VI++N    N +H A V  A S      ++A  I    DV YVLV   G+
Sbjct: 523 NQILKVAKRAVILNNILGVNRSHAAKVLTAKSGISTPAEKALNITHPRDVGYVLVTPEGM 582

Query: 628 TGYSSDDINKFLWMVRIGGGVFPVIKE----PDYLVNGDYRVDKGAAPKMLNCLMYKLSY 683
            G +  DINK  W++RI GG +P +K+      Y   G YR+D  A+ K  N L+ K+ Y
Sbjct: 583 IGIAPWDINKGDWIMRIRGGAYPYMKDVEEINFYNSTGLYRLDTEASEKNGNSLLVKIFY 642

Query: 684 YRFGELVT 691
               E+  
Sbjct: 643 SVKLEVKV 650

This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. Length = 650

>gnl\|CDD\|224206 COG1287, COG1287, Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|234485 TIGR04154, archaeo_STT3, oligosaccharyl transferase, archaeosortase A system-associated	Back alignment and domain information

>gnl\|CDD\|221995 pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

>gnl\|CDD\|224720 COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|216998 pfam02366, PMT, Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		740
KOG2292		751	consensus Oligosaccharyltransferase, STT3 subunit	100.0
COG1287		773	Uncharacterized membrane protein, required for N-l	100.0
PF02516		483	STT3: Oligosaccharyl transferase STT3 subunit; Int	100.0
TIGR03663		439	conserved hypothetical protein TIGR03663. Members	99.58
PF10034		642	Dpy19: Q-cell neuroblast polarisation; InterPro: I	98.93
PRK13279		552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	98.86
TIGR03662		723	Chlor_Arch_YYY Chlor_Arch_YYY domain. Members of t	98.73
PF02366		245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	98.68
PF13231		159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	98.61
TIGR03766		483	conserved hypothetical integral membrane protein.	98.58
PF10131		616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	98.53
COG1807		535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	98.49
KOG3359		723	consensus Dolichyl-phosphate-mannose:protein O-man	98.25
COG4745		556	Predicted membrane-bound mannosyltransferase [Post	98.03
COG1928		699	PMT1 Dolichyl-phosphate-mannose--protein O-mannosy	97.93
PLN02816		546	mannosyltransferase	97.57
PF11028		178	DUF2723: Protein of unknown function (DUF2723); In	97.57
PF11847		680	DUF3367: Domain of unknown function (DUF3367); Int	97.49
COG1287		773	Uncharacterized membrane protein, required for N-l	97.36
PF03901		418	Glyco_transf_22: Alg9-like mannosyltransferase fam	97.1
COG5305		552	Predicted membrane protein [Function unknown]	97.08
PF04188		443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	96.02
COG5617		801	Predicted integral membrane protein [Function unkn	95.75
COG4346		438	Predicted membrane-bound dolichyl-phosphate-mannos	95.71
PF09586		843	YfhO: Bacterial membrane protein YfhO; InterPro: I	95.16
PF09913		389	DUF2142: Predicted membrane protein (DUF2142); Int	94.81
PF04922		379	DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006	94.5
PF09852		449	DUF2079: Predicted membrane protein (DUF2079); Int	94.31
KOG4587		605	consensus Predicted membrane protein [Function unk	92.1
COG5650		536	Predicted integral membrane protein [Function unkn	91.7
PF02516		483	STT3: Oligosaccharyl transferase STT3 subunit; Int	91.58
PF09971		367	DUF2206: Predicted membrane protein (DUF2206); Int	89.92
KOG2515		568	consensus Mannosyltransferase [Cell wall/membrane/	88.59
PF10060		473	DUF2298: Uncharacterized membrane protein (DUF2298	80.35

>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

Probab=100.00  E-value=1.3e-217  Score=1720.17  Aligned_cols=706  Identities=64%  Similarity=1.115  Sum_probs=662.0

Q ss_pred             cchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCchHHHHHHHHHHHhcCccccccccCCCCCCCCc
Q 004635           30 FSFKSFKLKTKQQELLLRVSILGLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLG  109 (740)
Q Consensus        30 ~~~~~~~~~~~~~~~l~~~~iL~~i~~laf~iRl~~v~~~~~~i~~~Dpyy~~r~~~~l~~~G~~~~~~wfD~~~wyP~G  109 (740)
                      +++++ ..+.+.+.+++.++||+++.+++|..|+++++|||++|||||||||||.+++++|||+++|+||||.++|||+|
T Consensus         6 ~~~~~-~~~~~~~~~ll~~~IL~l~~v~~fssRLFaVirfESiIHEFDP~FNYR~T~~l~~~GfY~F~NWFDdRaWYPLG   84 (751)
T KOG2292|consen    6 GGFKR-KSSRKGQQTLLKLLILVLAAVLSFSSRLFAVIRFESIIHEFDPWFNYRATRFLVENGFYKFLNWFDDRAWYPLG   84 (751)
T ss_pred             ccccc-hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhHHHHHHHHhhHHHHHhhcccccccccc
Confidence            34444 45667899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHhhcchhHHHHHHHHhhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhhhhhhhc
Q 004635          110 RIIGGTLYPGLMVTAAFIYWTLRFLRFAVHIREVCVLTAPFFASNTTVVAYFFGKEIWDSGAGLVAAAFIAICPGYISRS  189 (740)
Q Consensus       110 r~vg~t~yPgL~~~~a~i~~~l~~~g~~~~l~~v~~~lppi~~~ltvi~~yll~~~l~~~~aGl~AA~l~Ai~P~~i~RS  189 (740)
                      |.+|||+|||||.|+++||++++.++++++++++|+++.|+|+++|.+.+|+++||+++..|||+||.++|++|+|++||
T Consensus        85 RiiGGTvYPGLmiTsg~I~~~L~~L~i~v~Ir~VCVflAP~FSg~TsiaTY~ltkEl~~~gaGL~AA~fiaivPgYiSRS  164 (751)
T KOG2292|consen   85 RIIGGTVYPGLMITSGLIYWVLHFLNIPVHIRNVCVFLAPLFSGLTSIATYLLTKELKSAGAGLLAAAFIAIVPGYISRS  164 (751)
T ss_pred             eeecccccchHHHHHHHHHHHHHHcccceeehheeeEechhhhchHHHHHHHHHHHHhcccccHHHHHHHhhCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCchhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhcchhhHHHHHH
Q 004635          190 VAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYN  269 (740)
Q Consensus       190 ~~G~~D~e~l~lf~~~l~~~l~i~al~~~~~~~~~lagl~~~l~~~~WgGy~~i~~~i~l~~~v~~l~~r~~~~~~~~y~  269 (740)
                      ++|+||||++++|++++++|+|+|++|++++.|+.+++++|+||+.+||||+|++|+||+|+++++++|||+.|+|++|+
T Consensus       165 VAGSYDNE~IAIfal~~T~ylwiKavkTGSifwa~~~aL~YFYMVsaWGGYvFiiNLIPLHVlvlllmGRyS~rlyiaY~  244 (751)
T KOG2292|consen  165 VAGSYDNEGIAIFALLFTYYLWIKAVKTGSIFWAACCALAYFYMVSAWGGYVFIINLIPLHVLVLLLMGRYSSRLYIAYT  244 (751)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhheeeccceEEEEechHHHHHHHHHhcccccceeeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 004635          270 CMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKYMLSDTKLFQAFLRITVTSAIAVGALALGVGTAS  349 (740)
Q Consensus       270 ~~~~lg~~l~~~ip~vg~~~~~s~~~~~a~~vf~ll~~~~~~~~l~~~l~~~k~~~~~~~~~i~~~~~ig~~~l~~l~~~  349 (740)
                      ++|++|++++||+|||||||++|+|||+++|||+++|++++.+++|.++++ ++|+.+.+..+..+..++++++.+++..
T Consensus       245 t~y~lGtllsmqipfVGFqpv~tsEHmaa~gVF~L~qi~Af~~y~k~~ls~-~~F~~l~~~~v~~~~~~~~vv~~~Lt~~  323 (751)
T KOG2292|consen  245 TFYCLGTLLSMQIPFVGFQPVRTSEHMAALGVFGLLQIVAFVDYLKGRLSP-KQFQVLFRLVVSLVGVVVFVVVAALTAT  323 (751)
T ss_pred             hHHHHHHHHHccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999998 9999999887766667777777888999


Q ss_pred             cccCChhhhhhhccccccccccCCccccccccCCCChhHHHHHhHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHH
Q 004635          350 GYISPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKKLSDATIFIVMYGLTSMYFA  429 (740)
Q Consensus       350 g~~~p~~gr~~~ll~~~~~~~~~Pi~~SVsEhqp~~w~~~~~~~~~~~~l~~~Gl~~~~~~~~~~~lfllv~~~~~~y~a  429 (740)
                      |+++||+||+++|+||+|+|+|+||++|||||||++|++||+|+|++++++|+|+|+||++++|+++|+++|+++++||+
T Consensus       324 g~iaPWtGRfySL~D~~YAK~hIPIIASVSEHQPttW~SfffDlhiLv~lfPaGl~~Cfk~l~De~vFiilY~v~~~YFa  403 (751)
T KOG2292|consen  324 GYIAPWTGRFYSLWDTGYAKIHIPIIASVSEHQPTTWSSFFFDLHILVFLFPAGLYYCFKNLSDERVFIILYGVTSVYFA  403 (751)
T ss_pred             ceecccccceeeccCCcchhcccceEEeccccCCCchHHHHHHHHHHHHhhhhhHHHhhhhcCCceEEEEehHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc--ccCCCCCCCCCCCC---cccccCCCCcccchhHHHHHH
Q 004635          430 GVMVRLILVATPAVCLISAIAVSATIKNLTSLLRTKSKTA--VAGSSKGTGGSKAS---SKASFDQSQPFQKNGAIALLL  504 (740)
Q Consensus       430 ~~~vRf~~~lap~vailagi~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~---~~~~~~~~~~~~~~~~~~~v~  504 (740)
                      ++|||+|++++|++|+++|+++|.++|.+.+..+.+..+.  ++.+.++++|..|.   .++..++........+.++++
T Consensus       404 GVMVRLmLtLtP~vCils~ia~S~~~~~y~~~~~~~~~~~~~~~~~~~d~~k~~~vk~~~~~~~~~~~~~~~~~~~~~~~  483 (751)
T KOG2292|consen  404 GVMVRLMLTLTPVVCILSGIAFSQLLDTYLKSDDTKREKSSISSASAEDEKKAGKVKSRSKKQGKQTEGVSLNVASIVIL  483 (751)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccchhcccccCCCccccccchhhhhhhhhhhhccccccCcchhhHHHHHH
Confidence            9999999999999999999999999999987554332211  11111111111111   111122233555567777777


Q ss_pred             HHHHHHHhhhcchhhhhcccCCCcceeeeeccCCCccccchhHHHHHHHHHhcCCCCCeeEEeccccchhheecCceeee
Q 004635          505 GAFYLLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIV  584 (740)
Q Consensus       505 ~i~~ll~~f~~~~~~~~~~~ys~Psiv~~~~~~~g~~~i~dD~~eAl~WLr~NTp~da~VmSWWDYGY~It~~a~R~tla  584 (740)
                      ++++++.+|+.||+|+|++|||+||+|++++++||++.+.|||||||+|||+|||+|++|||||||||||++||||||++
T Consensus       484 ~~~~~l~~f~~H~tWvTs~AYSsPSiVL~s~~~dg~r~i~DDFREAY~WLr~NT~~DakvmsWWDYGYQI~gMAnRTtlV  563 (751)
T KOG2292|consen  484 VMAMLLIMFVVHCTWVTSEAYSSPSIVLSSRGNDGSRIIFDDFREAYYWLRQNTPEDAKVMSWWDYGYQIAGMANRTTLV  563 (751)
T ss_pred             HHHHHHHHHHheeeeeeccccCCCcEEEEeecCCCCeeeehhhHHHHHHHHhCCcccchhhhhhhccchhhhcccceEEe
Confidence            77788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcchhhhhhhhhcCCHHHHHHHHHhcCCCEEEEEeCCccccCccchhhHHHHHHHhCCCCC-CCCCCCCcc-CCc
Q 004635          585 DNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFP-VIKEPDYLV-NGD  662 (740)
Q Consensus       585 Dnnt~n~t~Ia~vg~~las~E~~A~~Ilr~l~vdYVlv~~gg~~~y~~dDi~Kf~wm~rIa~~~~~-~i~~~dy~~-~g~  662 (740)
                      ||||||||||++|||+|+|+||+||+|||+||||||+|+|||++|||+||||||+||+|||++++| ||+|+||++ +||
T Consensus       564 DNNTWNNtHIa~VGkAMsS~EekayeImr~lDVdYVLVIFGG~iGYssDDINKFLWMvRI~~g~~p~~IkE~dy~t~~GE  643 (751)
T KOG2292|consen  564 DNNTWNNTHIATVGKAMSSPEEKAYEIMRELDVDYVLVIFGGLIGYSSDDINKFLWMVRIGGGEHPKHIKERDYFTPTGE  643 (751)
T ss_pred             ecCcccchHHHHHHhhcCCcHHHHHHHHHHcCCCEEEEEecccccCCcchhhhhheeeeecCCcChhhcccccccCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999 999999999 799


Q ss_pred             eeccCCCCHhHHHHHhHhhhhccccccccccCCCCccccccceeecCCCCCCCcceeEEeeCCcEEEEEEecCCC
Q 004635          663 YRVDKGAAPKMLNCLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPN  737 (740)
Q Consensus       663 ~~~~~~~~~~m~~slmykl~y~~f~~~~~~~~~~~g~d~~r~~~i~~~~~~l~~~ee~~ts~~~~vriykv~~~~  737 (740)
                      ||||+++||+|+||||||||||||+|.++++++++||||+||+|||+||++|+|+|||||||||+|||||||||+
T Consensus       644 fRvD~~asptmlNcLmYKmsYyrfge~~~~~~~~~GyDR~R~~eIg~Kd~~L~~~EEayTtehwlVRiYkvK~p~  718 (751)
T KOG2292|consen  644 FRVDAEASPTMLNCLMYKMSYYRFGELYTEFNGPPGYDRVRNAEIGNKDFKLDHLEEAYTTEHWLVRIYKVKKPN  718 (751)
T ss_pred             eecCCCCCHHHHHHHHHHHHhhhhhhhccccCCCCCcchhhhhhcCCCCCCchhhhhhhcccceEEEEEEecCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999984

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells	Back alignment and domain information

>TIGR03663 conserved hypothetical protein TIGR03663	Back alignment and domain information

>PF10034 Dpy19: Q-cell neuroblast polarisation; InterPro: IPR018732 This entry represents the Dpy-19 protein from Caenorhabditis elegans and its homologues in other Metazoa, including mammals	Back alignment and domain information

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional	Back alignment and domain information

>TIGR03662 Chlor_Arch_YYY Chlor_Arch_YYY domain	Back alignment and domain information

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

>TIGR03766 conserved hypothetical integral membrane protein	Back alignment and domain information

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein	Back alignment and domain information

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PLN02816 mannosyltransferase	Back alignment and domain information

>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria	Back alignment and domain information

>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised	Back alignment and domain information

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2	Back alignment and domain information

>COG5305 Predicted membrane protein [Function unknown]	Back alignment and domain information

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface	Back alignment and domain information

>COG5617 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []	Back alignment and domain information

>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function	Back alignment and domain information

>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family	Back alignment and domain information

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64	Back alignment and domain information

>KOG4587 consensus Predicted membrane protein [Function unknown]	Back alignment and domain information

>COG5650 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells	Back alignment and domain information

>PF09971 DUF2206: Predicted membrane protein (DUF2206); InterPro: IPR018701 This family of predicted membrane proteins from archaea has no known function	Back alignment and domain information

>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10060 DUF2298: Uncharacterized membrane protein (DUF2298); InterPro: IPR018746 Members of this highly hydrophobic probable integral membrane family belong to two classes	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		740
2lgz_A		273	Solution Structure Of Stt3p Length = 273		2e-56
3vu0_A		162	Crystal Structure Of The C-terminal Globular Domain		2e-04
2zag_A		497	Crystal Structure Of The Semet-Substituted Soluble		6e-04
2zai_A		497	Crystal Structure Of The Soluble Domain Of Stt3 Fro		8e-04

>pdb|2LGZ|A Chain A, Solution Structure Of Stt3p Length = 273

Back alignment and structure

Iteration: 1

Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 155/224 (69%), Gaps = 6/224 (2%) Query: 514 ATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQ 573 +H TWVT AYSSPS+VL ++ G + DD+REAY+WLR N+ D+KV +WWDYGYQ Sbjct: 18 GSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQ 77 Query: 574 ITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSD 633 I M +RT +VDNNTWNNTHIA VG+A +S E+++YEI++ DVDYVLV+FGG+ G+ D Sbjct: 78 IGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGD 137 Query: 634 DINKFLWMVRIGGGVFP-VIKEPD-YLVNGDYRVDKGAAPKMLNCLMYKLSYYRFGELVT 691 DINKFLW +RI G++P IKE D Y G+YRVD A+ M N L+YK+SY F +L Sbjct: 138 DINKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQL-- 195 Query: 692 EYGKPPGYDRARGVEIGNKDI-KLEHLEEAFTTSNWIVRIYKVK 734 + DR R I D+ L++ +E FT+ NW VRIY++K Sbjct: 196 -FNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLK 238

PyMOL of 2lgz

>pdb|3VU0|A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus Length = 162

Back alignment and structure

>pdb|2ZAG|A Chain A, Crystal Structure Of The Semet-Substituted Soluble Domain Of Stt3 From P. Furiosus Length = 497

Back alignment and structure

>pdb|2ZAI|A Chain A, Crystal Structure Of The Soluble Domain Of Stt3 From P. Furiosus Length = 497

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		740
2lgz_A		273	Dolichyl-diphosphooligosaccharide--protein glycosy	1e-97
3rce_A		724	Oligosaccharide transferase to N-glycosylate PROT;	3e-76
2zai_A		497	Oligosaccharyl transferase STT3 subunit related P;	2e-46
3vgp_A		164	Transmembrane oligosaccharyl transferase, putativ;	2e-45
3aag_A		291	General glycosylation pathway protein; multidomain	3e-12

>2lgz_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3; catalytic domain, oligosaccharyl transferase; NMR {Saccharomyces cerevisiae} Length = 273	Back alignment and structure

 Score =  302 bits (773), Expect = 1e-97
 Identities = 117/234 (50%), Positives = 158/234 (67%), Gaps = 6/234 (2%)

Query: 509 LLSKYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWW 568
            L    +H TWVT  AYSSPS+VL ++   G   + DD+REAY+WLR N+  D+KV +WW
Sbjct: 13  GLVPRGSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWW 72

Query: 569 DYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVT 628
           DYGYQI  M +RT +VDNNTWNNTHIA VG+A +S E+++YEI++  DVDYVLV+FGG+ 
Sbjct: 73  DYGYQIGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLI 132

Query: 629 GYSSDDINKFLWMVRIGGGVFP-VIKEPDYL-VNGDYRVDKGAAPKMLNCLMYKLSYYRF 686
           G+  DDINKFLW +RI  G++P  IKE D+    G+YRVD  A+  M N L+YK+SY  F
Sbjct: 133 GFGGDDINKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDF 192

Query: 687 GELVTEYGKPPGYDRARGVEIGNKDI-KLEHLEEAFTTSNWIVRIYKVKPPNNR 739
            +L   +      DR R   I   D+  L++ +E FT+ NW VRIY++K  + +
Sbjct: 193 PQL---FNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDAQ 243

PyMOL of 2lgz

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari} Length = 724	Back alignment and structure

>2zai_A Oligosaccharyl transferase STT3 subunit related P; multi-domain proteins (alpha and beta); 2.70A {Pyrococcus furiosus} PDB: 2zag_A Length = 497	Back alignment and structure

>3vgp_A Transmembrane oligosaccharyl transferase, putativ; glycosyltransferase, cell membrane; 1.75A {Archaeoglobus fulgidus} Length = 164	Back alignment and structure

>3aag_A General glycosylation pathway protein; multidomain, transferase; HET: MLY; 2.80A {Campylobacter jejuni} Length = 291	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00