Citrus Sinensis ID: 004700

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-----
MASTSKKATLSSFSAQALAQDSVSVSAPRASMVRDWSSDQPPKNAAIASLIRPVDPLAETSLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
ccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHccHHHHHHHHHcccccccEEEEEEEEccccccccccccEEEEEEEEEEEccccccccccccccccEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccEEEcccccEEEEEcEEEEEEcEEEEEEEcccccEEEEEEEEEcccccccEEEEEEccEEEEEEccccccccccEEEEEccccccccccccccccccccccEEEEEEEEEcccccEEEEccEEEEcccccccccEEcccccccEEEEEEEEEEEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEEEEEEcccccccccccEEcccccccccEEEEEEEEEEcccccccccEEEEEEEEEEcccccccccccEEEEEEEEEEccHHHHHHccccccccEEEEEEccccccccccEEEEEEcccccccccccccHHHHccccccccEEEEEEcccccccccccccccccccccHHHHHccccccccccEEEEEEEcccccccccccHHHHHHHHEEEEEEEcc
ccccccccccccccccccccccEEEcccccEEEEccccccccccHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEcccEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHccHHHHHHHHHcccccccEEEEccccccccccccccccEEEEEEEEEEcccccccccccccccccEEEEEEccccEEEEEEccccccccccccccccccccHccccccccccccccccccccccEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccccccEEEccccccccccEccccEcccEccccEEEccEEEcccccEEEccccEEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEccccEEccccccccccEEEccccccccccEEEEEEEEcccccccccEEEEEEEEEEEEccccccccccccEEEEEEEEcEHHHcEEcccHHHccEEEEEEEEEEcccccEEEEEEEEccccccccccccHHHHHcHHHHccEEEEEccccccccccccccccccccccHHHHHHcccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccc
mastskkatlssFSAQALaqdsvsvsaprasmvrdwssdqppknaaiaslirpvdplaetslnpsskgitamprpqtshpldplspaEISVAVATVraagptpevrdsMRFVEVVLVepdknvvaladayffppfqpsllprtkggpvipsklpprrARLVVYNKKSNETSIWIVELSQVHavtrgghhrgkvvssrvvpdiqppmdaeEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVgyysdadapsrrlakplifcrtesdcpmengyarpveGIYVLVDMQNMVviefedrklvplppadplrnytrgetrggvdrsdvkplqivqpegpsfrvnGYFVQWQkwnfrigftpregLVIYSVAYldgsrgrrsvahRLSFVEMVvpygdpnephyrknafdagedglgknahslKKGCDCLGYIKYFDAhftnftggvetiencvclheedhgmlwkhqdwrtGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLslgalqpgesrkygtmiapslyapvhQHFFIARMdmevdckpgeafNQVVEVDVkvekpggsnvhnnafYAEETLLKSEMQAMrdcnpltarhwivrntrtvnrtgqltgyklvpgsnclplagpdaTVFRRAAFLKHNLWVTAyardemfpggefpnqnprigeglpawvkqnrpleesDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
mastskkatlssfsaqalaqdsvsvsAPRASMvrdwssdqppKNAAIASLIRPVDPLAETSLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRaagptpevrdSMRFVEVVLVEPDKNVVALADAYFFPpfqpsllprtkggpvipsklpprraRLVVynkksnetsiWIVELSQVHavtrgghhrgkvvssrvvpdIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYsdadapsrrlAKPLIFCRtesdcpmengYARPVEGIYVLVDMQNMVVIEfedrklvplppadplrnytrgetrggvdrsdvkplqivqpegpsfrVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAevrrsrrlTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVekpggsnvhnnaFYAEETLLKSEMQAMRDCNPltarhwivrntrtvnrtgqltgyklvpgsnCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
MASTSKKATLSSFSAQALAQDSVSVSAPRASMVRDWSSDQPPKNAAIASLIRPVDPLAETSLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVElllclsllkllmnsylylISKWSCSLQL
******************************************************************************************VAVATVR*******VRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLP***************RARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVP*********EYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPL**************************QIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGD**********F******LGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEF*****RIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCS***
************************VSAPRAS************************************************PLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPR*******PSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLR***********************PEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLL*********CNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGP*ATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
******************************************KNAAIASLIRPVDPLAETSLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
*********************SVSVSAPRASMVRDWS***************************************TSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSL*PRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQ*
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
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MASTSKKATLSSFSAQALAQDSVSVSAPRASMVRDWSSDQPPKNAAIASLIRPVDPLAETSLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSYLYLISKWSCSLQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query735 2.2.26 [Sep-21-2011]
Q07123648 Copper methylamine oxidas N/A no 0.793 0.899 0.400 1e-126
Q07121648 Primary amine oxidase OS= N/A no 0.793 0.899 0.400 1e-126
Q59118684 Histamine oxidase OS=Arth N/A no 0.804 0.864 0.373 1e-105
P46881638 Phenylethylamine oxidase N/A no 0.632 0.728 0.406 4e-95
Q9P7F2712 Copper amine oxidase 1 OS yes no 0.794 0.820 0.330 2e-85
P12807692 Peroxisomal primary amine N/A no 0.776 0.825 0.323 2e-80
Q12556671 Copper amine oxidase 1 OS no no 0.787 0.862 0.333 1e-70
O42890 794 Copper amine oxidase-like no no 0.782 0.724 0.300 4e-68
P80695752 Primary amine oxidase OS= yes no 0.778 0.760 0.295 7e-63
P49250755 Primary amine oxidase OS= yes no 0.774 0.753 0.292 1e-62
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function desciption
 Score =  451 bits (1161), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 361/652 (55%), Gaps = 69/652 (10%)

Query: 61  SLNPSSKGITAMPRPQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPD 120
           +LN  S+ +  +     SHPLDPLS  EI+ AVA ++     P   +S RF+ V L EP 
Sbjct: 2   TLNAESEALVGV-----SHPLDPLSRVEIARAVAILKEG---PAAAESFRFISVELREPS 53

Query: 121 KNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQV 180
           K+ +                   + G  +      R A  V+ ++    +   +V+L   
Sbjct: 54  KDDL-------------------RAGVAVA-----READAVLVDRAQARSFEAVVDLEA- 88

Query: 181 HAVTRGGHHRGKVVSSRVVPD-IQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLV 239
                     G V S +++ + IQPP   +E+A+CE A +  P    A+ KRG+ ++DLV
Sbjct: 89  ----------GTVDSWKLLAENIQPPFMLDEFAECEDACRKDPEVIAALAKRGLTNLDLV 138

Query: 240 MVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEF 299
             + W VGY+ + D   RRL + L+F R E+D   ++ YA P+E   V  D+    V+  
Sbjct: 139 CFEPWSVGYFGE-DNEGRRLMRALVFVRDEAD---DSPYAHPIENFIVFYDLNAGKVVRL 194

Query: 300 EDRKLVPLPPA--DPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNF 357
           ED + +P+P A  + L  Y       G  R+D+KPL I QPEG SF V G  V W  W+F
Sbjct: 195 EDDQAIPVPSARGNYLPKYV------GEARTDLKPLNITQPEGASFTVTGNHVTWADWSF 248

Query: 358 RIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGL 417
           R+GFTPREGLV++ + + D    R  V +R S  EMVVPYGD      +KNAFD+GE  +
Sbjct: 249 RVGFTPREGLVLHQLKFKDQGVDR-PVINRASLSEMVVPYGDTAPVQAKKNAFDSGEYNI 307

Query: 418 GKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAE 477
           G  A+SL  GCDCLG IKYFD H  +  G   TIEN +C+HEED  +LWKH D+R G AE
Sbjct: 308 GNMANSLTLGCDCLGEIKYFDGHSVDSHGNPWTIENAICMHEEDDSILWKHFDFREGTAE 367

Query: 478 VRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYG-TMI 536
            RRSR+L +SFI TVANYEY FYWH + DG IE  VK TG+LS     PGE   YG ++ 
Sbjct: 368 TRRSRKLVISFIATVANYEYAFYWHLFLDGSIEFLVKATGILSTAGQLPGEKNPYGQSLN 427

Query: 537 APSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKV--EKPGGSNVHNNAFYAEETL 594
              LYAP+HQH F  RMD E+D       N V EVD++     P G+     AF A + L
Sbjct: 428 NDGLYAPIHQHMFNVRMDFELDGVK----NAVYEVDMEYPEHNPTGT-----AFMAVDRL 478

Query: 595 LKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAF 654
           L++E +A+R  N    R W + N  + N   +   Y+L+P +     A  DA V +RA F
Sbjct: 479 LETEQKAIRKTNEAKHRFWKIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQF 538

Query: 655 LKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFV 706
            ++NLWVTAY R E F  GE+PNQ     +GL  W +++R + ++D+V+W+ 
Sbjct: 539 ARNNLWVTAYDRTERFAAGEYPNQATGADDGLHIWTQKDRNIVDTDLVVWYT 590

Arthrobacter sp. (strain P1) (taxid: 47915)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description
>sp|Q9P7F2|CAO1_SCHPO Copper amine oxidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao1 PE=1 SV=1 Back     alignment and function description
>sp|P12807|AMO_PICAN Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1 Back     alignment and function description
>sp|Q12556|AMO1_ASPNG Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2 Back     alignment and function description
>sp|O42890|CAO2_SCHPO Copper amine oxidase-like protein cao2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao2 PE=3 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query735
449440642794 PREDICTED: copper methylamine oxidase-li 0.960 0.889 0.824 0.0
449477446791 PREDICTED: copper methylamine oxidase-li 0.960 0.892 0.824 0.0
255540539797 copper amine oxidase, putative [Ricinus 0.953 0.879 0.825 0.0
359495915774 PREDICTED: copper methylamine oxidase-li 0.952 0.904 0.843 0.0
297733721 1372 unnamed protein product [Vitis vinifera] 0.902 0.483 0.868 0.0
225456916791 PREDICTED: copper methylamine oxidase-li 0.903 0.839 0.879 0.0
357461827769 Primary amine oxidase [Medicago truncatu 0.895 0.855 0.865 0.0
297827947775 hypothetical protein ARALYDRAFT_903619 [ 0.960 0.910 0.822 0.0
356501642760 PREDICTED: copper methylamine oxidase-li 0.899 0.869 0.862 0.0
30689034776 primary-amine oxidase [Arabidopsis thali 0.960 0.909 0.818 0.0
>gi|449440642|ref|XP_004138093.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/722 (82%), Positives = 651/722 (90%), Gaps = 16/722 (2%)

Query: 1   MASTSKKATLSSFSAQALAQDSVSVSAPR-------ASMVRDWS--------SDQPPKNA 45
           MA  SKKATL S      +  + S + PR       A++V+DW+          +  KN 
Sbjct: 1   MAPASKKATLFSSDVCCHSSAAGSTTVPREAASVASANVVQDWNLTTNDRADDRRTSKNV 60

Query: 46  AIASLIRPVDPLAETSLNPSSKGITA-MPRPQTSHPLDPLSPAEISVAVATVRAAGPTPE 104
           AI SL+R V+P+ E S N SSKG+   M R Q+ HPLDPLS AEISVAVATVRAAG TPE
Sbjct: 61  AIPSLVRSVEPIPEPSTNASSKGVVPPMLRAQSRHPLDPLSAAEISVAVATVRAAGATPE 120

Query: 105 VRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRRARLVVYN 164
           VRDSMRF+EVVL+EP+K+VVALADAYFFPPFQPSLLP+TKGGPVIP+KLPPRRAR+VVYN
Sbjct: 121 VRDSMRFIEVVLLEPEKHVVALADAYFFPPFQPSLLPKTKGGPVIPTKLPPRRARIVVYN 180

Query: 165 KKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPF 224
           KKSNETSIW+VELS+VHAVTRGGHHRGKV+SS VVP++QPPMDA EYA+CEA VK +PPF
Sbjct: 181 KKSNETSIWVVELSEVHAVTRGGHHRGKVISSSVVPEVQPPMDAAEYAECEAIVKEYPPF 240

Query: 225 KEAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEG 284
            EAMKKRGIEDMDLVMVD WCVGY+S+ DAP RRLAKPLIFCRTESDCPMENGYARPVEG
Sbjct: 241 IEAMKKRGIEDMDLVMVDPWCVGYHSEVDAPGRRLAKPLIFCRTESDCPMENGYARPVEG 300

Query: 285 IYVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFR 344
           I+VLVDMQNMV+IEFEDRKLVPLPPADPLRNYT GETRGGVDRSDVKPLQIVQPEGPSFR
Sbjct: 301 IHVLVDMQNMVIIEFEDRKLVPLPPADPLRNYTSGETRGGVDRSDVKPLQIVQPEGPSFR 360

Query: 345 VNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPH 404
           VNGY+V+WQKWNFRIGFTPREGLVIYS+AY+DGSRGRR VAHRLSFVEMVVPYGDPN+PH
Sbjct: 361 VNGYYVEWQKWNFRIGFTPREGLVIYSIAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPH 420

Query: 405 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGM 464
           YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVC+HEEDHG+
Sbjct: 421 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCMHEEDHGI 480

Query: 465 LWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGAL 524
           LWKHQDWRTG AEVRRSRRLTVSFICTVANYEYGF+WHF+QDGKIEAEVKLTG+LSLGAL
Sbjct: 481 LWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFFWHFFQDGKIEAEVKLTGILSLGAL 540

Query: 525 QPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVH 584
           QPGE RKYGTMIAP LYAPVHQHFF+ARMDM VDCKPGEAFNQVVEVD+KVE PG +NVH
Sbjct: 541 QPGEYRKYGTMIAPGLYAPVHQHFFVARMDMAVDCKPGEAFNQVVEVDLKVEGPGENNVH 600

Query: 585 NNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGP 644
           NNAFYAEETLLKSEMQAMRDC+PL+ARHWIVRNTRTVNRTGQLTG+KL+PGSNCLPLAG 
Sbjct: 601 NNAFYAEETLLKSEMQAMRDCSPLSARHWIVRNTRTVNRTGQLTGFKLLPGSNCLPLAGS 660

Query: 645 DATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLW 704
           +A   RRA+FLKHNLWVT Y+RDEMFPGGEFPNQNPR+GEGL  WVK++RPLEE+DIVLW
Sbjct: 661 EAKFLRRASFLKHNLWVTQYSRDEMFPGGEFPNQNPRVGEGLSTWVKKDRPLEETDIVLW 720

Query: 705 FV 706
           +V
Sbjct: 721 YV 722

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449477446|ref|XP_004155025.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255540539|ref|XP_002511334.1| copper amine oxidase, putative [Ricinus communis] gi|223550449|gb|EEF51936.1| copper amine oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359495915|ref|XP_002273532.2| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] gi|296083412|emb|CBI23365.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297733721|emb|CBI14968.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225456916|ref|XP_002277961.1| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357461827|ref|XP_003601195.1| Primary amine oxidase [Medicago truncatula] gi|355490243|gb|AES71446.1| Primary amine oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297827947|ref|XP_002881856.1| hypothetical protein ARALYDRAFT_903619 [Arabidopsis lyrata subsp. lyrata] gi|297327695|gb|EFH58115.1| hypothetical protein ARALYDRAFT_903619 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356501642|ref|XP_003519633.1| PREDICTED: copper methylamine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|30689034|ref|NP_181777.2| primary-amine oxidase [Arabidopsis thaliana] gi|21539445|gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thaliana] gi|23197642|gb|AAN15348.1| putative copper amine oxidase [Arabidopsis thaliana] gi|330255032|gb|AEC10126.1| primary-amine oxidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.824
3rd Layer1.4.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_403120.1
annotation not avaliable (775 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
scaffold_501112.1
annotation not avaliable (137 aa)
  •     0.499

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query735
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 0.0
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 0.0
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-78
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 4e-73
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 1e-34
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 3e-08
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information 
 Score =  804 bits (2080), Expect = 0.0
 Identities = 307/632 (48%), Positives = 404/632 (63%), Gaps = 48/632 (7%)

Query: 75  PQTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPP 134
              SHPLDPL+ AEI  AVA +RA G    + +S RFV + L EP K  V          
Sbjct: 10  AAVSHPLDPLTAAEIEAAVAILRAEGL---LGESTRFVSIELAEPPKAEV---------- 56

Query: 135 FQPSLLPRTKGGPVIPSKLPPRRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVV 194
                L    G P+       RRA +V+Y++ + +T   +V L+            G+VV
Sbjct: 57  -----LAFDPGDPI------DRRAFVVLYDRATGKTYEAVVSLT-----------AGEVV 94

Query: 195 SSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDMDLVMVDAWCVGYYSDADA 254
           S   +P +QPP+  EE+ +CE  V+A P ++ A+ KRGI D DLVMVD W  GY+ + + 
Sbjct: 95  SWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEE 154

Query: 255 PSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLR 314
             RRLA+ L F R +   P +NGYARP+EG+  +VD+  M V+  ED  +VP+P  D   
Sbjct: 155 RGRRLARGLAFVRAD---PGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--G 209

Query: 315 NYTRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAY 374
           NY          R+D+KPL+I QPEGPSF V+G  V+WQKW+FR+GF PREGLV++ V+Y
Sbjct: 210 NYDPEFI--PPLRTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSY 267

Query: 375 LDGSRGRRSVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYI 434
            DG R  R + +R S  EMVVPYGDP+  HY KNAFDAGE GLG+ A+SL+ GCDCLG I
Sbjct: 268 DDGGR-ERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEI 326

Query: 435 KYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVAN 494
           +YFDA   +  G   TI+N +C+HEED+G+LWKH D+RTG AEVRRSRRL +SF  TV N
Sbjct: 327 RYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGSAEVRRSRRLVISFFATVGN 386

Query: 495 YEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMD 554
           Y+YGFYW+FYQDG IE EVKLTG++   A+ PGE+  YGT++AP LYAP HQHFF AR+D
Sbjct: 387 YDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLD 446

Query: 555 MEVDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWI 614
           M+VD   G   N V EV+      G  N H NAFY  ETLL++E +A RD +P T R+W 
Sbjct: 447 MDVD---GPG-NSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWK 502

Query: 615 VRNTRTVNRTGQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGE 674
           + N    NR G+   YKLVPG N   LA P +++ +RA F  H+LWVT Y  DE +  G+
Sbjct: 503 IVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGD 562

Query: 675 FPNQNPRIGEGLPAWVKQNRPLEESDIVLWFV 706
           +PNQ+   G+GLPA++  +R +E +D+VLW+ 
Sbjct: 563 YPNQSAG-GDGLPAYIAADRSIENTDVVLWYT 593

Length = 647
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 735
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.89
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.66
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-180  Score=1528.73  Aligned_cols=599  Identities=51%  Similarity=0.887  Sum_probs=565.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCCCcCcCCCCCCCCCCCCc
Q 004700           77 TSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPR  156 (735)
Q Consensus        77 ~~HPLDpLs~~EI~~a~~iv~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~ll~~~~~~~~~p~~~P~R  156 (735)
                      +.|||||||++||++|++|||++.+   .++.++|++|+|+||+|+.|+.   |           + .+.      .++|
T Consensus        12 ~~HPLdpLt~~Ei~~a~~iv~~~~~---~~~~~~F~~i~L~EP~K~~v~~---~-----------~-~g~------~~~R   67 (647)
T PRK11504         12 VSHPLDPLTAAEIEAAVAILRAEGL---LGESTRFVSIELAEPPKAEVLA---F-----------D-PGD------PIDR   67 (647)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhccc---cCCceEEEEeeccCCCHHHHHh---h-----------h-cCC------CCCc
Confidence            4699999999999999999999864   2357999999999999999873   1           1 222      2379


Q ss_pred             eEEEEEEECCCCcEEEEEEeCCcccccccCccccccEEEeeeCCCCCCCCCHHHHHHHHHHHHcChhHHHHHHHcCCCCC
Q 004700          157 RARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIEDM  236 (735)
Q Consensus       157 ~A~vv~~~~~~~~~~e~vV~L~~~~~~~~~~~~~~~v~~~~~l~~~~p~~~~~E~~~~e~~~~~~p~~~ea~~~~Gl~~~  236 (735)
                      +|+|++++..++.++|++|||+           +++|++++.++++||+++.+|+.+||++|++||+|+++|+||||+++
T Consensus        68 ~a~v~~~~~~~~~~~e~vVdL~-----------~~~V~~~~~~~~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~  136 (647)
T PRK11504         68 RAFVVLYDRATGKTYEAVVSLT-----------AGEVVSWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITDF  136 (647)
T ss_pred             EEEEEEEECCCCcEEEEEEECC-----------CCEEEEEEECCCccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCc
Confidence            9999999998889999999998           68999999999999999999999999999999999999999999989


Q ss_pred             CeEEEecccccccCCCCCCCCceEEEEEEeecCCCCCCCCccCCCCCCeEEEEeccCcEEEEEecCccccCCCCCCCCCC
Q 004700          237 DLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPADPLRNY  316 (735)
Q Consensus       237 ~~v~~dpw~~G~~~~~~~~~~Rl~~~l~f~r~~~~~~~~n~Ya~Pi~gl~~~vD~~~~~vi~i~d~~~~p~p~~~~~~~y  316 (735)
                      ++|+||||++|+++..++.++||+|++||+|.   ++++|+||||||||.++||++++||++|+|.+.+|+|+..  +||
T Consensus       137 ~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~---~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~--~~Y  211 (647)
T PRK11504        137 DLVMVDPWSAGYFGEPEERGRRLARGLAFVRA---DPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--GNY  211 (647)
T ss_pred             ceEEEcCccccccCCCCcCCceEEEEEEEEec---CCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC--CCC
Confidence            99999999999987765557999999999996   4678999999999999999999999999998877877665  699


Q ss_pred             CCCCcCCCCCCCCCCCCcccCCCCCeEEEeceEEeeeceEEEEEecCCcceeEEeEEEecCCCCeeeEEEEeeeeeEEee
Q 004700          317 TRGETRGGVDRSDVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVP  396 (735)
Q Consensus       317 ~~~~~~~~~~r~dlkPl~i~QPeG~sF~Vdg~~V~Wq~W~F~vgf~~reGlvL~dV~f~d~~~g~R~I~YrlSl~Em~Vp  396 (735)
                      .++.+. +. |+++|||+|+||||+||+|+|++|+||||+||+|||+||||+||||+|+|+|++ |||+||+|||||+||
T Consensus       212 ~~~~~~-~~-r~dlkPl~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~d~g~~-R~v~YrlslsEm~VP  288 (647)
T PRK11504        212 DPEFIP-PL-RTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSYDDGGRE-RPILYRASLSEMVVP  288 (647)
T ss_pred             ChhHcc-cc-ccCCCCcceeCCCCCcEEEcCCEEEECCcEEEEecCCCCceEEEEEEEcCCCCc-ceEEEEeeeeeeeee
Confidence            988764 44 999999999999999999999999999999999999999999999999998774 889999999999999


Q ss_pred             cCCCCCccccceeeecCCCCCccCCCCCCCCCCCCCCeeEeceeeecCCCCeEEeeceEEEeeecCCcccccccccCCce
Q 004700          397 YGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFA  476 (735)
Q Consensus       397 Ygdp~~p~~~k~afD~GeyG~G~~a~~L~~G~DCpg~i~YlDa~~~~~~G~p~~~~naICifE~D~GilwkH~d~r~g~~  476 (735)
                      ||||+++|++|+|||+||||+|.+||+|++||||||+|+|||+++++.+|+|++++|||||||+|.|+||||+|||++.+
T Consensus       289 Ygdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D~GilwkHt~~r~~~~  368 (647)
T PRK11504        289 YGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGSA  368 (647)
T ss_pred             cCCCCcchhhceeeeccccCCcccccccccCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeecCCeeeeeeccCCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecceEEEEEeeeecccceeEEEEEecCCeEEEEEEEeeeeEeeecCCCCCCCCcccccCCCccccceeeEEEEEeec
Q 004700          477 EVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDME  556 (735)
Q Consensus       477 ~v~r~r~LVvr~I~TVgNYDYifdw~F~~DGtIe~ev~aTGil~t~~~~~~~~~~yGt~V~p~~~g~~HqH~f~~RlD~d  556 (735)
                      +++|+|+||||+|+|||||||||+|+|||||+||+||+|||||+++++.++++.+||++|+|+++|++|||+||||||||
T Consensus       369 ~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~Ie~eV~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~d  448 (647)
T PRK11504        369 EVRRSRRLVISFFATVGNYDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLDMD  448 (647)
T ss_pred             EEEeccEEEEEEEEecccccEEEEEEEecCceEEEEEEeeeEEEeeeeCCCccCCCcceecCCcccccceEEEEEEEccc
Confidence            99999999999999999999999999999999999999999999999977777889999999999999999999999999


Q ss_pred             cCCCCCCcccEEEEEeeeecCCCCCCCCCcceEEEEEEeehhhhhhhccCCCCCeEEEEEeCCccCCCCCceeEEEecCC
Q 004700          557 VDCKPGEAFNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGS  636 (735)
Q Consensus       557 VDG~~gg~~Nsv~~~~~~~~~~~~~np~~n~~~~~~t~~~tE~~a~~~~~~~~~r~w~i~N~~~~N~~G~p~gYkl~p~~  636 (735)
                      |||    .+|||+++++++.+.++.||+||+|++++|++++|++|+++++++++|+|+|+|++++|++|+|+||||+|++
T Consensus       449 IDG----~~Nsv~~~d~~~~p~~~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~  524 (647)
T PRK11504        449 VDG----PGNSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGG  524 (647)
T ss_pred             ccC----CCceEEEEEeEecCCCCCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCC
Confidence            998    6899999999988888899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhhhhhhccccceEEeeccCCCcCCCCCCCCCCCCCCCChhhhcccCCceecCCcEEEEEecccccCCCc
Q 004700          637 NCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLK  716 (735)
Q Consensus       637 ~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~esI~~eDiVlW~t~G~~HiPr~E  716 (735)
                      ++.+|+.++|+..+||+||+||||||+|+|+|+||+|+|+||+.+ ++||++|+++||+|+|||||||||||+||+||+|
T Consensus       525 ~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~Qs~~-~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~E  603 (647)
T PRK11504        525 NPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGDYPNQSAG-GDGLPAYIAADRSIENTDVVLWYTFGITHVPRPE  603 (647)
T ss_pred             CccccCCCCchhhhcchhhhCcEEEeccCCCccccCCCCcccCCC-CCCHHHHhcCCCccccCceEEEEecCcccCCChh
Confidence            999999999999999999999999999999999999999999986 5799999999999999999999999999999999


Q ss_pred             cchhhhh
Q 004700          717 LLMNSYL  723 (735)
Q Consensus       717 D~Pnt~~  723 (735)
                      |+|++-.
T Consensus       604 D~PvMP~  610 (647)
T PRK11504        604 DWPVMPV  610 (647)
T ss_pred             hCCCCcc
Confidence            9998553

>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query735
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 3e-96
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 2e-95
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-95
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 3e-95
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 3e-95
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 4e-95
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-94
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 2e-94
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 1e-81
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 2e-81
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 9e-81
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 1e-79
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 6e-79
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 6e-79
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 7e-79
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 8e-79
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 2e-69
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 2e-61
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 2e-60
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 5e-60
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 5e-60
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 6e-60
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 2e-59
1w2z_A649 Psao And Xenon Length = 649 3e-57
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 3e-57
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 2e-22
1rky_A747 Pplo + Xe Length = 747 3e-21
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 6e-19
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 6e-17
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 4e-16
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 5e-16
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 6e-16
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 5e-14
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure 
Iteration: 1

 Score =  349 bits (896), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 195/480 (40%), Positives = 278/480 (57%), Gaps = 15/480 (3%)
Query: 226 EAMKKRGIEDMDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGI 285
           +A+  R + D+  V V     G +  A+   RR+ + L F +   D P ++ +A PV+G+
Sbjct: 120 KALAARNL-DVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQ---DFPEDSAWAHPVDGL 175
Query: 286 YVLVDMQNMVVIEFEDRKLVPLPPADPLRNYTRGETRGGVDRSDVKPLQIVQPEGPSFRV 345
              VD+ +  V    D  + P+P      NYT  E  G + R+  KP+ I QPEGPSF V
Sbjct: 176 VAYVDVVSKEVTRVIDTGVFPVPAEHG--NYTDPELTGPL-RTTQKPISITQPEGPSFTV 232
Query: 346 NG-YFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPH 404
            G   ++W+KW+  +GF  REG+V++++A+ DG R  R + +R S  EMVVPYGDP+   
Sbjct: 233 TGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR 291
Query: 405 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGM 464
             +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  G    I N +C+HEED G+
Sbjct: 292 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGI 351
Query: 465 LWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGAL 524
           L KH D  +G    RR+RR+ +SF  T+ NY+YGFYW+ Y DG IE E K TGV+   A 
Sbjct: 352 LAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAF 411
Query: 525 QPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAFNQVVEVDVKVEKPGGSNVH 584
             G S    + +AP L AP HQH F AR+DM +D       N+V E DV  +  G  N  
Sbjct: 412 PEGGSDNI-SQLAPGLGAPFHQHIFSARLDMAIDGFT----NRVEEEDVVRQTMGPGNER 466
Query: 585 NNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGP 644
            NAF  + T+L  E +A+R+ +  T R WI+ N  + NR  +  GYKL   +    LA P
Sbjct: 467 GNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP 526
Query: 645 DATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLW 704
            +++ RRAAF   +LWVT YA DE +P G+F NQ+   G GLP+++ Q+R ++  DIV+W
Sbjct: 527 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVW 585
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query735
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 0.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 0.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 0.0
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-180
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-169
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-160
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-158
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-152
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query735
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
Probab=100.00  E-value=6.2e-179  Score=1522.58  Aligned_cols=602  Identities=33%  Similarity=0.570  Sum_probs=558.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCCCcCcCCCCCCCCCCCC
Q 004700           76 QTSHPLDPLSPAEISVAVATVRAAGPTPEVRDSMRFVEVVLVEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPP  155 (735)
Q Consensus        76 ~~~HPLDpLs~~EI~~a~~iv~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~ll~~~~~~~~~p~~~P~  155 (735)
                      ..+|||||||++||++|++||+++..    ++.++|++|+|+||+|++|+.   |           ++..+     ++|+
T Consensus        20 ~~~HPLDpLs~~Ei~~a~~iv~~~~~----~~~~~F~~i~L~EP~K~~v~~---~-----------~~~~~-----~~p~   76 (692)
T 3sxx_A           20 RPAHPLDPLSTAEIKAATNTVKSYFA----GKKISFNTVTLREPARKAYIQ---W-----------KEQGG-----PLPP   76 (692)
T ss_dssp             CCSSTTSCCCHHHHHHHHHHHHHHTT----TSCEEEEEEEEECCCHHHHHH---H-----------HHSCC-----CCCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCC----CCCcEEEEEECCCCCHHHHHH---H-----------HhcCC-----CCCC
Confidence            35899999999999999999998764    357999999999999999983   2           11111     3688


Q ss_pred             ceEEEEEEECCCCcEEEEEEeCCcccccccCccccccEEEeeeCCCCCCCCCHHHHHHHHHHHHcChhHHHHHHHcCCCC
Q 004700          156 RRARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVVSSRVVPDIQPPMDAEEYAQCEAAVKAFPPFKEAMKKRGIED  235 (735)
Q Consensus       156 R~A~vv~~~~~~~~~~e~vV~L~~~~~~~~~~~~~~~v~~~~~l~~~~p~~~~~E~~~~e~~~~~~p~~~ea~~~~Gl~~  235 (735)
                      |+|+|++++.++++++|++|||+           +++|++|+.++++||+|+.|||.+||++|++||+|+++|++|||++
T Consensus        77 R~a~v~~~~~~~~~~~e~vVdl~-----------~~~v~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~  145 (692)
T 3sxx_A           77 RLAYYVILEAGKPGVKEGLVDLA-----------SLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPA  145 (692)
T ss_dssp             CEEEEEEEETTCSSEEEEEEETT-----------TTEEEEEEEETTCCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCG
T ss_pred             eEEEEEEEECCCCCEEEEEEECC-----------CCeEEEEEECCCCcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCc
Confidence            99999999988889999999998           6899999999999999999999999999999999999999999965


Q ss_pred             --CCeEEEecccccccCCCCCCCCceEEEEEEeecCCCCCCCCccCCCCCCeEEEEeccCcEEEEEecCcc-ccCCCCCC
Q 004700          236 --MDLVMVDAWCVGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKL-VPLPPADP  312 (735)
Q Consensus       236 --~~~v~~dpw~~G~~~~~~~~~~Rl~~~l~f~r~~~~~~~~n~Ya~Pi~gl~~~vD~~~~~vi~i~d~~~-~p~p~~~~  312 (735)
                        +++|+||||++|+++.. +.++||+|++||+|..   +++|+|||||| |+++||++++||++|++... .|+|+.. 
T Consensus       146 ~~~~~V~~dpw~~G~~~~~-~~~~Rl~~~~~y~r~~---~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~-  219 (692)
T 3sxx_A          146 NEMHKVYCDPWTIGYDERW-GTGKRLQQALVYYRSD---EDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHK-  219 (692)
T ss_dssp             GGGGGEEEEEEECCCCTTT-TTSSCEEEEEEEECSS---TTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSC-
T ss_pred             cccceEEEccccccccCCC-CCCceEEEEEEEEecC---CCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCC-
Confidence              45699999999997654 4589999999999973   46899999999 99999999999999988765 4555433 


Q ss_pred             CCCCCCCCcC--CCCCCC-CCCCCcccCCCCCeEEEeceEEeeeceEEEEEecCCcceeEEeEEEecCCCCeeeEEEEee
Q 004700          313 LRNYTRGETR--GGVDRS-DVKPLQIVQPEGPSFRVNGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLS  389 (735)
Q Consensus       313 ~~~y~~~~~~--~~~~r~-dlkPl~i~QPeG~sF~Vdg~~V~Wq~W~F~vgf~~reGlvL~dV~f~d~~~g~R~I~YrlS  389 (735)
                      ..||.++.+.  ++. |+ |+|||+|+||||+||+|+||+|+||||+||||||+||||+||||+|+|+|+ .||||||+|
T Consensus       220 ~~~Y~p~~~~~~~~~-r~~d~kP~~i~QPeG~sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~~g~-~R~V~YrlS  297 (692)
T 3sxx_A          220 HANFYPKHMIEKVGA-MRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGN-VRPIFHRIS  297 (692)
T ss_dssp             CCCCSHHHHHHHHSS-CCCCCCCCEEECTTCCSCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEE
T ss_pred             CCCCChHHccccCCC-CCCCCCCceecCCCCCcEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcCCCc-ceeeeeeee
Confidence            4799887654  344 88 999999999999999999999999999999999999999999999999765 699999999


Q ss_pred             eeeEEeecCCCCCccccceeeecCCCCCccCCCCCCCCCCCCCCeeEeceeeecCCCCeEEeeceEEEeeecCCcccccc
Q 004700          390 FVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQ  469 (735)
Q Consensus       390 l~Em~VpYgdp~~p~~~k~afD~GeyG~G~~a~~L~~G~DCpg~i~YlDa~~~~~~G~p~~~~naICifE~D~GilwkH~  469 (735)
                      ||||+||||||++||+||+|||+||||||.++|+|+|||||||+|+|||+++.+.+|+|++++|||||||+|+|+||||+
T Consensus       298 l~Em~VPYgdp~~p~~~k~afD~GeyG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d~Gil~kHt  377 (692)
T 3sxx_A          298 LSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHS  377 (692)
T ss_dssp             EEEEEEEBCCCSTTGGGCEECHHHHTCTTTTBCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred             hheeEEecCCCCchhhhheeeeccccCCCccccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeeccCCceEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC--ceeeeecceEEEEEeeeecccceeEEEEEecCCeEEEEEEEeeeeEeeecCCCC-CCCCcccccCCCccccce
Q 004700          470 DWRTG--FAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGE-SRKYGTMIAPSLYAPVHQ  546 (735)
Q Consensus       470 d~r~g--~~~v~r~r~LVvr~I~TVgNYDYifdw~F~~DGtIe~ev~aTGil~t~~~~~~~-~~~yGt~V~p~~~g~~Hq  546 (735)
                      |||++  .++++|+|+||||+|+|||||||||||+|||||+||+||+|||||+++++.+++ ..+|||+|+|+++|++||
T Consensus       378 ~~r~~~~~~~v~r~r~LVvr~i~TVgNYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~~yGt~V~~~v~a~~Hq  457 (692)
T 3sxx_A          378 DFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQ  457 (692)
T ss_dssp             CGGGTTCSEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEECCTTCCCTTTEEEEETTEEEECEE
T ss_pred             eccCCCceeeEEeccEEEEEEeeeccceeEEEEEEEecCCeEEEEEEEEEEEEeeeeCCCcccCCCcceecCCcccccee
Confidence            99998  899999999999999999999999999999999999999999999999998777 689999999999999999


Q ss_pred             eeEEEEEeeccCCCCCCcccEEEEEeeeecCC---CCCCCCCcceEEEEEEeehhhhhhhccCCCCCeEEEEEeCCccCC
Q 004700          547 HFFIARMDMEVDCKPGEAFNQVVEVDVKVEKP---GGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNR  623 (735)
Q Consensus       547 H~f~~RlD~dVDG~~gg~~Nsv~~~~~~~~~~---~~~np~~n~~~~~~t~~~tE~~a~~~~~~~~~r~w~i~N~~~~N~  623 (735)
                      |+|||||||||||    .+|||++++++..+.   ++.|||||+|++++|+++||++|+++++++++|+|+|+|++++|+
T Consensus       458 H~f~~RlD~dIdG----~~Nsv~~~d~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~  533 (692)
T 3sxx_A          458 HLFSLRIDPRIDG----DGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNP  533 (692)
T ss_dssp             EEEEEEEEECTTS----SCBEEEEEEEEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCT
T ss_pred             EEEEEEeccccCC----CCceEEEEEeEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCC
Confidence            9999999999998    799999999998765   578999999999999999999999999999999999999999999


Q ss_pred             C-CCceeEEEecCCCCCCCCCCCchhhhhhhccccceEEeeccCCCcCCCCCCCCCCCCC-CCChhhhc-ccCCceecCC
Q 004700          624 T-GQLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRI-GEGLPAWV-KQNRPLEESD  700 (735)
Q Consensus       624 ~-G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~-~~gl~~~~-~~~esI~~eD  700 (735)
                      + |+|+||||+|++++++|+.|+|...+||+||+||||||||+|+|+||+|+|+||+++. .+||++|+ ++||+|+|||
T Consensus       534 ~sG~pvgYkL~p~~~~~ll~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~D  613 (692)
T 3sxx_A          534 YSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTD  613 (692)
T ss_dssp             TTCSCCEEEEECCCCCCCCSCTTSHHHHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBC
T ss_pred             CCCccceEEEecCCCCcccCCCCchhhhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCc
Confidence            8 9999999999999988999999999999999999999999999999999999999762 37999999 8999999999


Q ss_pred             cEEEEEecccccCCCccchhhhh
Q 004700          701 IVLWFVELLLCLSLLKLLMNSYL  723 (735)
Q Consensus       701 iVlW~t~G~~HiPr~ED~Pnt~~  723 (735)
                      |||||||||||+||+||+|++-.
T Consensus       614 iV~W~t~G~~HiPr~ED~PvMP~  636 (692)
T 3sxx_A          614 ILFFHTFGITHFPAPEDFPLMPA  636 (692)
T ss_dssp             EEEEEEEEEEECCCGGGSSSCCC
T ss_pred             eEEEEecCcccCCchhcCCCCcc
Confidence            99999999999999999999643
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 735
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-160
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-158
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-155
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-154
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-139
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 5e-33
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 5e-32
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 3e-30
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 6e-26
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 3e-21
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 2e-17
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 1e-14
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 2e-14
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

 Score =  467 bits (1203), Expect = e-160
 Identities = 167/381 (43%), Positives = 231/381 (60%), Gaps = 8/381 (2%)

Query: 327 RSDVKPLQIVQPEGPSFRV-NGYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVA 385
           R+  KP+ I QPEGPSF V  G  ++W+KW+  +GF  REG+V++++A+ DG R R  + 
Sbjct: 3   RTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRP-II 61

Query: 386 HRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFT 445
           +R S  EMVVPYGDP+     +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  
Sbjct: 62  NRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAF 121

Query: 446 GGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRLTVSFICTVANYEYGFYWHFYQ 505
           G    I N +C+HEED G+L KH D  +G    RR+RR+ +SF  T+ NY+YGFYW+ Y 
Sbjct: 122 GNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYL 181

Query: 506 DGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEAF 565
           DG IE E K TGV+   A   G S    + +AP L AP HQH F AR+DM +D       
Sbjct: 182 DGTIEFEAKATGVVFTSAFPEGGSD-NISQLAPGLGAPFHQHIFSARLDMAIDGFT---- 236

Query: 566 NQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTG 625
           N+V E DV  +  G  N   NAF  + T+L  E +A+R+ +  T R WI+ N  + NR  
Sbjct: 237 NRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLN 296

Query: 626 QLTGYKLVPGSNCLPLAGPDATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEG 685
           +  GYKL   +    LA P +++ RRAAF   +LWVT YA DE +P G+F NQ+   G G
Sbjct: 297 EPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAG 355

Query: 686 LPAWVKQNRPLEESDIVLWFV 706
           LP+++ Q+R ++  DIV+W  
Sbjct: 356 LPSYIAQDRDIDGQDIVVWHT 376
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query735
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.93
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.84
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.78
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.75
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.75
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 98.92
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 91.59
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

Probab=100.00  E-value=6.2e-133  Score=1095.56  Aligned_cols=390  Identities=43%  Similarity=0.749  Sum_probs=378.0

Q ss_pred             CCCCCCCCcccCCCCCeEEEe-ceEEeeeceEEEEEecCCcceeEEeEEEecCCCCeeeEEEEeeeeeEEeecCCCCCcc
Q 004700          326 DRSDVKPLQIVQPEGPSFRVN-GYFVQWQKWNFRIGFTPREGLVIYSVAYLDGSRGRRSVAHRLSFVEMVVPYGDPNEPH  404 (735)
Q Consensus       326 ~r~dlkPl~i~QPeG~sF~Vd-g~~V~Wq~W~F~vgf~~reGlvL~dV~f~d~~~g~R~I~YrlSl~Em~VpYgdp~~p~  404 (735)
                      .|+++||++|+||||+||+|+ ||+|+||+|+|||+|++|+||+||||+|+|++| .|+|+||+|||||+||||||+++|
T Consensus         2 ~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r-~r~i~Y~lsl~E~~vpY~~~~p~~   80 (417)
T d1w6ga1           2 LRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR   80 (417)
T ss_dssp             CCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred             CCCCCCCceeeCCCCCCEEECCCCEEEEcCCEEEEEeCCCcccEEEEEEEcCCCe-EeeEEEEecceeEEEECCCCCchh
Confidence            389999999999999999997 999999999999999999999999999998766 489999999999999999999999


Q ss_pred             ccceeeecCCCCCccCCCCCCCCCCCCCCeeEeceeeecCCCCeEEeeceEEEeeecCCcccccccccCCceeeeecceE
Q 004700          405 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGMLWKHQDWRTGFAEVRRSRRL  484 (735)
Q Consensus       405 ~~k~afD~GeyG~G~~a~~L~~G~DCpg~i~YlDa~~~~~~G~p~~~~naICifE~D~GilwkH~d~r~g~~~v~r~r~L  484 (735)
                      ++|+|||+||||||.++++|+||||||++|+|||+++++++|+|++++|||||||+|.|++|||++++++..+++|+++|
T Consensus        81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L  160 (417)
T d1w6ga1          81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM  160 (417)
T ss_dssp             TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred             hhceeEeccccchhhhccccccCCCCCccCeEeeEEEecCCCCEEeccceEEEeecCCCceEEEEEecCCceeEEeeeeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeeecccceeEEEEEecCCeEEEEEEEeeeeEeeecCCCCCCCCcccccCCCccccceeeEEEEEeeccCCCCCCc
Q 004700          485 TVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGESRKYGTMIAPSLYAPVHQHFFIARMDMEVDCKPGEA  564 (735)
Q Consensus       485 Vvr~I~TVgNYDYifdw~F~~DGtIe~ev~aTGil~t~~~~~~~~~~yGt~V~p~~~g~~HqH~f~~RlD~dVDG~~gg~  564 (735)
                      |||+|+|||||||||||+|||||+||++|+|||||+++++.++ ...||++|+|+++|++|||+|||||||||||    +
T Consensus       161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~-~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG----~  235 (417)
T d1w6ga1         161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEG-GSDNISQLAPGLGAPFHQHIFSARLDMAIDG----F  235 (417)
T ss_dssp             EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTT-CCSSEEEEETTEEEECEEEEEEEEEEECTTS----S
T ss_pred             EEEEEEEeeeeeEEEEEEEecCcEEEEEEEEEEEEEEeccCCC-CCCcccEeccCcccccccceeEEEeccccCC----C
Confidence            9999999999999999999999999999999999999988755 4589999999999999999999999999998    7


Q ss_pred             ccEEEEEeeeecCCCCCCCCCcceEEEEEEeehhhhhhhccCCCCCeEEEEEeCCccCCCCCceeEEEecCCCCCCCCCC
Q 004700          565 FNQVVEVDVKVEKPGGSNVHNNAFYAEETLLKSEMQAMRDCNPLTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGP  644 (735)
Q Consensus       565 ~Nsv~~~~~~~~~~~~~np~~n~~~~~~t~~~tE~~a~~~~~~~~~r~w~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~  644 (735)
                      +|+|++++++..+.+..||++++|+++++.+++|.+|.+++++.++|+|+|+|++++|++|+|+||||+|++++.+++.+
T Consensus       236 ~Nsv~~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~  315 (417)
T d1w6ga1         236 TNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP  315 (417)
T ss_dssp             CBEEEEEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCT
T ss_pred             CceEEEEeeEEecCCCccccccEEEEEEEEEEehhhhhhcccccCccEEEEECCCCcCCCCCcceEEEccCCCCcccCCC
Confidence            99999999999888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhhccccceEEeeccCCCcCCCCCCCCCCCCCCCChhhhcccCCceecCCcEEEEEecccccCCCccchhhh
Q 004700          645 DATVFRRAAFLKHNLWVTAYARDEMFPGGEFPNQNPRIGEGLPAWVKQNRPLEESDIVLWFVELLLCLSLLKLLMNSY  722 (735)
Q Consensus       645 ~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~esI~~eDiVlW~t~G~~HiPr~ED~Pnt~  722 (735)
                      +|...+||+|++||||||||+|+|+||+|+|+||+.+ ++||++|+++||+|+||||||||||||||+||+||+|++-
T Consensus       316 ~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~-~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp  392 (417)
T d1w6ga1         316 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMP  392 (417)
T ss_dssp             TSHHHHHTGGGGSSEEEEECCTTCCCTTCSCCBTCCS-SSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEE
T ss_pred             CchhhhcchhhcccEEEecCCCccccCCCCCccCCCC-CCChhHhhcCCCcccCCcEEEEEeCCcccCCChhhCCCCc
Confidence            9999999999999999999999999999999999975 5799999999999999999999999999999999999753
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure