Citrus Sinensis ID: 004760
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | 2.2.26 [Sep-21-2011] | |||||||
| O34413 | 407 | Putative glycosyltransfer | yes | no | 0.224 | 0.402 | 0.285 | 3e-09 | |
| Q59002 | 390 | Uncharacterized glycosylt | yes | no | 0.121 | 0.228 | 0.376 | 8e-07 | |
| P42982 | 377 | Uncharacterized glycosylt | no | no | 0.151 | 0.294 | 0.310 | 9e-07 | |
| P10691 | 805 | Sucrose synthase OS=Solan | N/A | no | 0.159 | 0.145 | 0.300 | 9e-07 | |
| P39862 | 380 | Capsular polysaccharide b | yes | no | 0.233 | 0.45 | 0.256 | 3e-06 | |
| O24301 | 809 | Sucrose synthase 2 OS=Pis | N/A | no | 0.151 | 0.137 | 0.277 | 3e-06 | |
| D1BD84 | 420 | D-inositol 3-phosphate gl | yes | no | 0.170 | 0.297 | 0.325 | 4e-06 | |
| Q46638 | 407 | Amylovoran biosynthesis g | yes | no | 0.136 | 0.245 | 0.320 | 8e-06 | |
| Q9H553 | 416 | Alpha-1,3/1,6-mannosyltra | yes | no | 0.147 | 0.259 | 0.263 | 9e-06 | |
| O05083 | 353 | Uncharacterized glycosylt | yes | no | 0.150 | 0.311 | 0.286 | 1e-05 |
| >sp|O34413|YTCC_BACSU Putative glycosyltransferase YtcC OS=Bacillus subtilis (strain 168) GN=ytcC PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 557 HLRRKVLSKSDGKQQQALKILIGSVG------SKSNKVPYVKEILEFLSQHSNLSKAMLW 610
H R++L QQ +L+ + G S++ V Y++ + H +K +
Sbjct: 211 HSMRRIL------QQHPDAVLVIAGGKWFSDDSENQYVTYLRTLALPYRDHIIFTK---F 261
Query: 611 TPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTG 670
PA + +L+ ADV+V +SQ E RV EAMA G P++ T+ GG E+V+H VTG
Sbjct: 262 IPADD-IPNLFLMADVFVCSSQ-WNEPLARVNYEAMAAGTPLITTNRGGNGEVVKHEVTG 319
Query: 671 LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730
L+ + A+ + + + +M RK VE ++ H K+L+ V +
Sbjct: 320 LVI-DSYNKPSSFAKAIDRAFTDQELMNKMTKNARKHVEALFTFTHAAKRLNTVYQSVLT 378
Query: 731 PK 732
PK
Sbjct: 379 PK 380
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 2EC: .EC: 4EC: .EC: -EC: .EC: - |
| >sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 620 LYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG 679
LY +ADV VI S + E FG V +EAMA G PV+ + GG EI++H V G+ P +P
Sbjct: 280 LYKSADVVVIPS--VYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNPD 337
Query: 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMY 712
+ +A + +L + RE + +K V Y
Sbjct: 338 S--IAWGVDRVLSDWGFREYIVNNAKKDVYEKY 368
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Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|P42982|YPJH_BACSU Uncharacterized glycosyltransferase YpjH OS=Bacillus subtilis (strain 168) GN=ypjH PE=3 SV=2 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
RV LYS +D+ ++ S+ E+FG V +EAMA GVP +GT+ GG E++++NV+G L
Sbjct: 265 RVEDLYSISDLKLLLSEK--ESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLVDV 322
Query: 676 GHPGAQVLAQNLRY--LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKPK 732
G V A R +L++ + R + +E + K + + Q+ +P+
Sbjct: 323 G----DVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADLAEPE 377
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|P10691|SUS1_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 591 VKEILEFLSQHSNLSKAMLWTPAT---TRVASLYSAADVYVINSQG------LGETFGRV 641
+K++ E + H NL+ W + R LY Y+ +++G E FG
Sbjct: 624 MKKMYELIETH-NLNGQFRWISSQMNRVRNGELYR----YIADTKGAFVQPAFYEAFGLT 678
Query: 642 TIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGH--PGAQVLAQNLRYLLKNPSVRER 699
+EAM G+P T+ GG EI+ H +G P H A +LA K+PS E
Sbjct: 679 VVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWET 738
Query: 700 MAMEGRKKVERMY 712
++M G K++E Y
Sbjct: 739 ISMGGLKRIEEKY 751
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P39862|CAPM_STAAU Capsular polysaccharide biosynthesis glycosyltransferase CapM OS=Staphylococcus aureus GN=capM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 552 SFGSGHLRRKVLSKSDGKQQQALKILIGS--------VGSKSNKVPYVKEILEFLSQHSN 603
+F G++ R V K + Q+ KI++ +GS + + FL+Q+ N
Sbjct: 197 NFVIGYVGRIVKDKGIHELIQSFKIIVSKGYNVKLLVIGSLETENSIDESDYLFLTQNPN 256
Query: 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEI 663
+ + + S Y+ +V+V + E FG V+IEA A VPV+ T+ G +
Sbjct: 257 V----VLIKHVSDPISFYNNMNVFVFPTHR--EGFGNVSIEAQALEVPVITTNVTGAIDT 310
Query: 664 VEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723
V + TG + G A +A+ + L+ + S+RE + GRK+VE + + ++++L
Sbjct: 311 VVNGETGFIVEKGDFKA--IAEKIEKLINDESLRETIGHNGRKRVENKFSSQIIWEELES 368
Query: 724 VIYKCMK 730
+ +K
Sbjct: 369 MYNTFLK 375
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Required for the biosynthesis of type 1 capsular polysaccharide. Staphylococcus aureus (taxid: 1280) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 598 LSQHSNLSKAMLWTPATT---RVASLYSAADVYVINSQG------LGETFGRVTIEAMAF 648
L + NL+ W A T R LY Y+ +++G E FG +EAM
Sbjct: 634 LMKQYNLNGEFRWITAQTNRARNGELYR----YIADTKGAFVQPAFYEAFGLTVVEAMTC 689
Query: 649 GVPVLGTDAGGTKEIVEHNVTGLLHPPGHP--GAQVLAQNLRYLLKNPSVRERMAMEGRK 706
G+P T+ GG EI+EH V+G P HP +++L + ++P+ +++ G +
Sbjct: 690 GLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQ 749
Query: 707 KVERMY 712
++ Y
Sbjct: 750 RIYERY 755
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|D1BD84|MSHA_SANKS D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 577 LIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VASLYSAADVYVINSQGL 634
L+ +G S + ++E LE L+ +S +L+ PA +R +A + AD+ + S+
Sbjct: 270 LLVVLGGASGRPTALRE-LEALAYQVGVSDDVLFLPAVSRSELARWFRCADLVAVPSRS- 327
Query: 635 GETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694
E+FG V +EA A G PV+ D GG + V+ +G+L P P A LR LL++
Sbjct: 328 -ESFGLVAVEAQACGTPVVAADVGGLRTAVQDGRSGVLVPDHDP--HRWAAVLRDLLRD- 383
Query: 695 SVRERMAMEGRKKVE 709
ER+A R +E
Sbjct: 384 --DERLARLSRGALE 396
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) (taxid: 446469) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|Q46638|AMSK_ERWAM Amylovoran biosynthesis glycosyltransferase AmsK OS=Erwinia amylovora GN=amsK PE=3 SV=2 | Back alignment and function description |
|---|
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 624 ADVYVINS----QGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG 679
AD++++ S G E +EAMA G+PV+ ++ G E++EHNV+G L P G
Sbjct: 300 ADIFLLPSLTAADGDMEGIPVALMEAMAVGLPVVSSEHSGIPELIEHNVSGWLAPEG--D 357
Query: 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725
AQ LA L L + + + + R KVE + + Y++L++++
Sbjct: 358 AQALAAILLRLSQGEADVVPVVLAARAKVETEFNQHIAYRQLAEIL 403
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Involved in the biosynthesis of amylovoran which functions as a virulence factor. Erwinia amylovora (taxid: 552) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|Q9H553|ALG2_HUMAN Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Homo sapiens GN=ALG2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+++ L+S V S E FG V +EAM PV+ ++GG E ++H+VTG L
Sbjct: 308 KISLLHSCTCVLYTPSN---EHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGFL--- 361
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729
P ++ + ++ PS++ M + GR +V+ + + ++L + + K +
Sbjct: 362 CEPDPVHFSEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLL 415
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Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|O05083|Y1698_HAEIN Uncharacterized glycosyltransferase HI_1698 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1698 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 592 KEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP 651
+E L+ L++ ++ ++ + P T V+ Y ++ +Y + SQ E V IEAMAFG+P
Sbjct: 224 EENLKNLAKALDIEDSVNFIPRTNDVSFYYESSSIYCLPSQT--EGLPLVVIEAMAFGLP 281
Query: 652 VLGTDAG-GTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGR 705
++ + G K++VEH G L + + + + L L+ NP + +M+ + R
Sbjct: 282 IVAFNCSPGVKQLVEHKENGFLCEQNN--IEEMVKGLDLLINNPELYLQMSDKSR 334
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Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| 147838732 | 734 | hypothetical protein VITISV_013841 [Viti | 0.995 | 0.993 | 0.696 | 0.0 | |
| 255574530 | 686 | glycosyltransferase, putative [Ricinus c | 0.927 | 0.989 | 0.673 | 0.0 | |
| 225442687 | 691 | PREDICTED: uncharacterized protein LOC10 | 0.933 | 0.988 | 0.681 | 0.0 | |
| 297743306 | 683 | unnamed protein product [Vitis vinifera] | 0.926 | 0.992 | 0.662 | 0.0 | |
| 224054196 | 681 | predicted protein [Populus trichocarpa] | 0.922 | 0.991 | 0.670 | 0.0 | |
| 449464260 | 682 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.991 | 0.614 | 0.0 | |
| 356555993 | 701 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.994 | 0.626 | 0.0 | |
| 356547414 | 701 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.994 | 0.615 | 0.0 | |
| 15233237 | 697 | UDP-glycosyltransferase-like protein [Ar | 0.919 | 0.965 | 0.610 | 0.0 | |
| 297847636 | 670 | glycosyl transferase family 1 protein [A | 0.898 | 0.982 | 0.600 | 0.0 |
| >gi|147838732|emb|CAN71826.1| hypothetical protein VITISV_013841 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/737 (69%), Positives = 612/737 (83%), Gaps = 8/737 (1%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSASL 60
ME+ GD H NV RQSS R GGSLKS+LSGRSTP+NSPSFRR ++SRTPRRE RS+ +
Sbjct: 1 MEEGNGRGDFHGNVVRQSSLRPGGSLKSTLSGRSTPRNSPSFRRSHSSRTPRREARSSGV 60
Query: 61 --QWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
QWFR+NR+V+WL+LITLW YLGFYVQS+WAHG+NN+ +GFGGK N I DS N++
Sbjct: 61 GSQWFRNNRVVFWLILITLWAYLGFYVQSKWAHGDNNEDIIGFGGKPNNGISDSELNRKA 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSS---RGKG 175
LIAN L + NG+ K KK+D+VL ++ N+ SRRS + +K+SK+S RGK
Sbjct: 121 PLIANDKLLAVKNGSDKNPVGSGKKVDVVLAKKGNSVPSRRSASSKKRSKKSERSLRGKT 180
Query: 176 RGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGD 235
R KQK K +VE M+ Q EIP N SYGLLVGPFG TEDRILEWSPEKRSGTCDR+G+
Sbjct: 181 R-KQKTKTEVEVTEMDEQEQEIPKLNTSYGLLVGPFGSTEDRILEWSPEKRSGTCDRRGE 239
Query: 236 FARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKI 295
AR VWSRKF+LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK+GGLMPELARR+I
Sbjct: 240 LARLVWSRKFVLIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMPELARRRI 299
Query: 296 KVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRA 355
KVLEDR + SFKT+MKADLVIAGSAVCA+WI+QYI F AG SQ+VWWIMENRREYFDR+
Sbjct: 300 KVLEDRADLSFKTAMKADLVIAGSAVCASWIEQYIAHFTAGSSQIVWWIMENRREYFDRS 359
Query: 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTP 415
KLV++RVK+L+FLSESQ+KQWLTWC+EE ++L SQPAVVPLSVNDELAFVAG TCSLNTP
Sbjct: 360 KLVINRVKMLIFLSESQSKQWLTWCKEENIRLISQPAVVPLSVNDELAFVAGITCSLNTP 419
Query: 416 TSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSM 475
+ + EKM+EKR LLRDS+RKEMGLTD DML+LSLSSINPGKGQ L+ES + MIEQEPS
Sbjct: 420 SFTTEKMQEKRRLLRDSIRKEMGLTDTDMLLLSLSSINPGKGQFFLLESVRSMIEQEPSQ 479
Query: 476 DDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535
DD +++ +G+ +S+ + +H+ R LLQ + +SS+ L +S+ESF +LN P KN
Sbjct: 480 DDPELKDLAKIGQDQSNFSGKHY--SRALLQNVNHFSVSSSGLRLSNESFIELNGPKSKN 537
Query: 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEIL 595
L+ PSLF SI +DAVS GSG+ RRKVLS+++G Q+QALK+LIGSVGSKSNKVPYVK +L
Sbjct: 538 LMLPSLFPSISPSDAVSIGSGYKRRKVLSENEGTQEQALKVLIGSVGSKSNKVPYVKGLL 597
Query: 596 EFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT 655
FL +HSNLSK++LWTPATTRVASLYSAADVYVINSQG+GETFGRV+IEAMAFG+ VLGT
Sbjct: 598 RFLXRHSNLSKSVLWTPATTRVASLYSAADVYVINSQGMGETFGRVSIEAMAFGLTVLGT 657
Query: 656 DAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKK 715
DAGGT EIVE NVTGLLHP GH G Q+L++N+R+LLKNPS RE+M GRKKVERMYLK+
Sbjct: 658 DAGGTXEIVEQNVTGLLHPVGHLGTQILSENIRFLLKNPSAREQMGKRGRKKVERMYLKR 717
Query: 716 HMYKKLSQVIYKCMKPK 732
HMYK+L++V+YKCM+ K
Sbjct: 718 HMYKRLAEVLYKCMRIK 734
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574530|ref|XP_002528176.1| glycosyltransferase, putative [Ricinus communis] gi|223532388|gb|EEF34183.1| glycosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/739 (67%), Positives = 582/739 (78%), Gaps = 60/739 (8%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRS--A 58
MED +N GDLHVNV RQS R GGS +S+LSGRST KNSP+FRRL++SRTPR E RS
Sbjct: 1 MEDVINRGDLHVNVVRQSPLRSGGSFRSTLSGRSTAKNSPTFRRLHSSRTPRGEARSIGG 60
Query: 59 SLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
+QWFRS RLVYWLLLITLW YLGFYVQSRWAHG+N + FLGFGG+ RNEI QN RR
Sbjct: 61 GVQWFRSTRLVYWLLLITLWAYLGFYVQSRWAHGDNKEDFLGFGGQNRNEISVPEQNTRR 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDAS--RRSVAKRKKSKRSSR---G 173
DL+AN S + +N+GT D ++I +VL ++ N +S +++ +K+SKR+ R
Sbjct: 121 DLLANDSSVAVNDGTDNVQVEDDRRIGVVLAKKGNTVSSNQKKNSFSKKRSKRAGRRLRS 180
Query: 174 KGRGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRK 233
K R KQKA ++VES +E Q P+IP N +YG LVGPFG TEDRILEWSPEKR+GTCDRK
Sbjct: 181 KTRDKQKATVEVESEDVEVQEPDIPQKNTTYGFLVGPFGSTEDRILEWSPEKRTGTCDRK 240
Query: 234 GDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARR 293
GDFAR VWSRKF+LIFHELSMTGAPLSMMELATE LSCGATVSAVVLSK+GGLM EL RR
Sbjct: 241 GDFARLVWSRKFVLIFHELSMTGAPLSMMELATEFLSCGATVSAVVLSKKGGLMSELNRR 300
Query: 294 KIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFD 353
+IKVLED+ + SFKT+MKADLVIAGSAVCA+WIDQY+TRFPAGGSQ+VWWIMENRREYFD
Sbjct: 301 RIKVLEDKADLSFKTAMKADLVIAGSAVCASWIDQYMTRFPAGGSQIVWWIMENRREYFD 360
Query: 354 RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLN 413
R+K+VL+RVK+LVFLSESQT+QWL+WC+EEK+KLR+ PA+VPLS+NDELAFVAG CSLN
Sbjct: 361 RSKIVLNRVKMLVFLSESQTEQWLSWCDEEKIKLRAPPAIVPLSINDELAFVAGIACSLN 420
Query: 414 TPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEP 473
TP+SSPEKM EKR LL DSVRKEMGLTD D+L++SLSSINPGKGQLL++ESA+L+IE EP
Sbjct: 421 TPSSSPEKMLEKRRLLADSVRKEMGLTDDDVLLVSLSSINPGKGQLLILESAKLLIEPEP 480
Query: 474 SMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533
K+R S +G ++S + +HHL R LLQ S++ + L E
Sbjct: 481 L---QKLRSSVGIGEEQSRIAVKHHL--RALLQE-------------KSKAVSDLKEGQE 522
Query: 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKE 593
K L +ALK+LIGSVGSKSNKVPYVKE
Sbjct: 523 KYL-----------------------------------KALKVLIGSVGSKSNKVPYVKE 547
Query: 594 ILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVL 653
+L +L+QHSNLSK++LWTPATTRVASLYSAAD YVINSQGLGETFGRVTIEAMAFG+PVL
Sbjct: 548 MLSYLTQHSNLSKSVLWTPATTRVASLYSAADAYVINSQGLGETFGRVTIEAMAFGLPVL 607
Query: 654 GTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYL 713
GTDAGGTKEIVEHNVTGLLHP G PG VLAQNLR+LL+NPSVRE+M M GRKKVERMYL
Sbjct: 608 GTDAGGTKEIVEHNVTGLLHPVGRPGTHVLAQNLRFLLRNPSVREQMGMAGRKKVERMYL 667
Query: 714 KKHMYKKLSQVIYKCMKPK 732
K+HMYKK S+V+YKCM+ K
Sbjct: 668 KRHMYKKFSEVLYKCMRVK 686
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442687|ref|XP_002284822.1| PREDICTED: uncharacterized protein LOC100246448 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/723 (68%), Positives = 586/723 (81%), Gaps = 40/723 (5%)
Query: 15 ARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSASL--QWFRSNRLVYWL 72
RQSS R GGSLKS+LSGRSTP+NSPSFRR ++SRTPRRE RS+ + QWFR+NR+V+WL
Sbjct: 4 VRQSSLRPGGSLKSTLSGRSTPRNSPSFRRSHSSRTPRREARSSGVGSQWFRNNRVVFWL 63
Query: 73 LLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNG 132
+LITLW YLGFYVQS+WAHG+NN+ +GFGGK N I DS N++ LIAN L + NG
Sbjct: 64 ILITLWAYLGFYVQSKWAHGDNNEDIIGFGGKPNNGISDSELNRKAPLIANDKLLAVKNG 123
Query: 133 TIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSS---RGKGRGKQKAKLDVESNY 189
+ K KK+D+VL ++ N+ SRRS + +K+SK+S RGK R KQK K +VE
Sbjct: 124 SDKNPVGSGKKVDVVLAKKGNSVPSRRSASSKKRSKKSERSLRGKTR-KQKTKTEVEVTE 182
Query: 190 MEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIF 249
M+ Q EIP N SYGLLVGPFG TEDRILEWSPEKRSGTCDR+G+ AR VWSRKF+LIF
Sbjct: 183 MDEQEQEIPKLNTSYGLLVGPFGSTEDRILEWSPEKRSGTCDRRGELARLVWSRKFVLIF 242
Query: 250 HELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTS 309
HELSMTGAPLSMMELATELLSCGATVSAVVLSK+GGLMPELARR+IKVLEDR + SFKT+
Sbjct: 243 HELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMPELARRRIKVLEDRADLSFKTA 302
Query: 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLS 369
MKADLVIAGSAVCA+WI+QYI F AG SQ+VWWIMENRREYFDR+KLV++RVK+L+FLS
Sbjct: 303 MKADLVIAGSAVCASWIEQYIAHFTAGSSQIVWWIMENRREYFDRSKLVINRVKMLIFLS 362
Query: 370 ESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLL 429
ESQ+KQWLTWC+EE ++L SQPAVVPLSVNDELAFVAG TCSLNTP+ + EKM+EKR LL
Sbjct: 363 ESQSKQWLTWCKEENIRLISQPAVVPLSVNDELAFVAGITCSLNTPSFTTEKMQEKRRLL 422
Query: 430 RDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489
RDS+RKEMGLTD DML+LSLSSINPGKGQ L+ES + MIEQEPS DD +++ +G+
Sbjct: 423 RDSIRKEMGLTDTDMLLLSLSSINPGKGQFFLLESVRSMIEQEPSQDDPELKDLVKIGQD 482
Query: 490 KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTD 549
+S+ + +H+ R LLQ + N SVSS +D
Sbjct: 483 QSNFSGKHY--SRALLQ-------NVNHFSVSS-------------------------SD 508
Query: 550 AVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML 609
VS GSG+ RRKVLS+++G Q+QALK+LIGSVGSKSNKVPYVK +L FL++HSNLSK++L
Sbjct: 509 EVSIGSGYKRRKVLSENEGTQEQALKVLIGSVGSKSNKVPYVKGLLRFLTRHSNLSKSVL 568
Query: 610 WTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVT 669
WTPATTRVASLYSAADVYVINSQG+GETFGRVTIEAMAFG+PVLGTDAGGTKE+VE NVT
Sbjct: 569 WTPATTRVASLYSAADVYVINSQGMGETFGRVTIEAMAFGLPVLGTDAGGTKEVVEQNVT 628
Query: 670 GLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729
GLLHP GH G Q+L++N+R+LLKNPS RE+M GRKKVERMYLK+HMYK+L++V+YKCM
Sbjct: 629 GLLHPVGHLGTQILSENIRFLLKNPSSREQMGKRGRKKVERMYLKRHMYKRLAEVLYKCM 688
Query: 730 KPK 732
+ K
Sbjct: 689 RIK 691
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743306|emb|CBI36173.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/737 (66%), Positives = 577/737 (78%), Gaps = 59/737 (8%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSASL 60
ME+ GD H NV RQSS R GGSLKS+LSGRSTP+NSPSFRR ++SRTPRRE RS+ +
Sbjct: 1 MEEGNGRGDFHGNVVRQSSLRPGGSLKSTLSGRSTPRNSPSFRRSHSSRTPRREARSSGV 60
Query: 61 --QWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
QWFR+NR+V+WL+LITLW YLGFYVQS+WAHG+NN+ +GFGGK N I DS N++
Sbjct: 61 GSQWFRNNRVVFWLILITLWAYLGFYVQSKWAHGDNNEDIIGFGGKPNNGISDSELNRKA 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSS---RGKG 175
LIAN L + NG+ K KK+D+VL ++ N+ SRRS + +K+SK+S RGK
Sbjct: 121 PLIANDKLLAVKNGSDKNPVGSGKKVDVVLAKKGNSVPSRRSASSKKRSKKSERSLRGKT 180
Query: 176 RGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGD 235
R KQK K +VE M+ Q EIP N SYGLLVGPFG TEDRILEWSPEKRSGTCDR+G+
Sbjct: 181 R-KQKTKTEVEVTEMDEQEQEIPKLNTSYGLLVGPFGSTEDRILEWSPEKRSGTCDRRGE 239
Query: 236 FARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKI 295
AR VWSRKF+LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK+GGLMPELARR+I
Sbjct: 240 LARLVWSRKFVLIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMPELARRRI 299
Query: 296 KVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRA 355
KVLEDR + SFKT+MKADLVIAGSAVCA+WI+QYI F AG SQ+VWWIMENRREYFDR+
Sbjct: 300 KVLEDRADLSFKTAMKADLVIAGSAVCASWIEQYIAHFTAGSSQIVWWIMENRREYFDRS 359
Query: 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTP 415
KLV++RVK+L+FLSESQ+KQWLTWC+EE ++L SQPAVVPLSVNDELAFVAG TCSLNTP
Sbjct: 360 KLVINRVKMLIFLSESQSKQWLTWCKEENIRLISQPAVVPLSVNDELAFVAGITCSLNTP 419
Query: 416 TSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSM 475
+ + EKM+EKR LLRDS+RKEMGLTD DML+LSLSSINPGKGQ L+ES + MIEQEPS
Sbjct: 420 SFTTEKMQEKRRLLRDSIRKEMGLTDTDMLLLSLSSINPGKGQFFLLESVRSMIEQEPSQ 479
Query: 476 DDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535
DD +++ +G+ +S+ + +H+ R LLQ LN P KN
Sbjct: 480 DDPELKDLVKIGQDQSNFSGKHY--SRALLQ--------------------NLNGPKSKN 517
Query: 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEIL 595
L+ P +QALK+LIGSVGSKSNKVPYVK +L
Sbjct: 518 LMLP-------------------------------KQALKVLIGSVGSKSNKVPYVKGLL 546
Query: 596 EFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT 655
FL++HSNLSK++LWTPATTRVASLYSAADVYVINSQG+GETFGRVTIEAMAFG+PVLGT
Sbjct: 547 RFLTRHSNLSKSVLWTPATTRVASLYSAADVYVINSQGMGETFGRVTIEAMAFGLPVLGT 606
Query: 656 DAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKK 715
DAGGTKE+VE NVTGLLHP GH G Q+L++N+R+LLKNPS RE+M GRKKVERMYLK+
Sbjct: 607 DAGGTKEVVEQNVTGLLHPVGHLGTQILSENIRFLLKNPSSREQMGKRGRKKVERMYLKR 666
Query: 716 HMYKKLSQVIYKCMKPK 732
HMYK+L++V+YKCM+ K
Sbjct: 667 HMYKRLAEVLYKCMRIK 683
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224054196|ref|XP_002298139.1| predicted protein [Populus trichocarpa] gi|222845397|gb|EEE82944.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/738 (67%), Positives = 573/738 (77%), Gaps = 63/738 (8%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSS-LSGRSTPKNSPSFRRLNASRTPRREVR-SA 58
ME+ + GDLHVNV +Q+ RQGGS KS+ LSGRSTP+NSP+ R L++SRTPRRE R S
Sbjct: 1 MEEGKSRGDLHVNVLKQTPSRQGGSFKSTTLSGRSTPRNSPTHRLLHSSRTPRREGRGSG 60
Query: 59 SLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
+QWFRSNRL+YWLLLITLWTYLGFYVQSRWAHG+N D+FLGFGGK N ++D+ Q+ RR
Sbjct: 61 GIQWFRSNRLIYWLLLITLWTYLGFYVQSRWAHGDNKDEFLGFGGKSSNGLLDAEQHTRR 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVA----KRKKSKRSSRGK 174
DL+AN S + +NNGT K ++KKID+VL ++ N +S R K K+ R SR K
Sbjct: 121 DLLANDSLVVVNNGTNKIQVRNAKKIDVVLAKKGNGVSSNRRATPKKKKSKRGGRRSRAK 180
Query: 175 GRGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKG 234
KQKA + VES+ +E P++P NASYGLLVGPFG EDRILEWSPEKRSGTCDRKG
Sbjct: 181 AHDKQKATVVVESDDVEVAEPDVPKNNASYGLLVGPFGPIEDRILEWSPEKRSGTCDRKG 240
Query: 235 DFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRK 294
FAR VWSRKF+LIFHELSMTGAPLSM+ELATE LSCGATVSAVVLSK+GGLMPELARR+
Sbjct: 241 AFARLVWSRKFVLIFHELSMTGAPLSMLELATEFLSCGATVSAVVLSKKGGLMPELARRR 300
Query: 295 IKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDR 354
IKVLEDR + SFKT+MKADLVIAGSAVC +WIDQYI RFPAGGSQVVWWIMENRREYFDR
Sbjct: 301 IKVLEDRADLSFKTAMKADLVIAGSAVCTSWIDQYIARFPAGGSQVVWWIMENRREYFDR 360
Query: 355 AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNT 414
+K++L+RVK+LVFLSESQ KQW TWCEEE ++LRS PAVV LSVNDELAFVAG CSLNT
Sbjct: 361 SKIILNRVKMLVFLSESQMKQWQTWCEEENIRLRSPPAVVQLSVNDELAFVAGIACSLNT 420
Query: 415 PTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPS 474
PTSS EKM EKR LLR+SVRKEMGLTD DMLV+SLSSIN GKGQLLL+ESA L+IE +PS
Sbjct: 421 PTSSSEKMLEKRQLLRESVRKEMGLTDNDMLVMSLSSINAGKGQLLLLESANLVIEPDPS 480
Query: 475 MDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRK 534
KI S + G +S+L ++HHLR L+ RK
Sbjct: 481 ---PKITNSVDKG-NQSTLAAKHHLRA--------------------------LSHRKRK 510
Query: 535 NLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEI 594
L A S G+ KVL IGSVGSKSNKVPYVKEI
Sbjct: 511 LL-------------ADSEGTHEQALKVL--------------IGSVGSKSNKVPYVKEI 543
Query: 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLG 654
L F+SQHSNLSK++LWT ATTRVASLYSAADVY+ NSQGLGETFGRVTIEAMAFG+PVLG
Sbjct: 544 LRFISQHSNLSKSVLWTSATTRVASLYSAADVYITNSQGLGETFGRVTIEAMAFGLPVLG 603
Query: 655 TDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLK 714
TDAGGT+EIVEHN+TGLLHP G PG++VLAQN+ LLKNPSVR++M ++GRKKVE+MYLK
Sbjct: 604 TDAGGTQEIVEHNITGLLHPVGRPGSRVLAQNIELLLKNPSVRKQMGIKGRKKVEKMYLK 663
Query: 715 KHMYKKLSQVIYKCMKPK 732
+HMYKK+ +V+YKCM+ K
Sbjct: 664 RHMYKKIWEVLYKCMRVK 681
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464260|ref|XP_004149847.1| PREDICTED: uncharacterized protein LOC101207532 [Cucumis sativus] gi|449496350|ref|XP_004160111.1| PREDICTED: uncharacterized protein LOC101223486 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/729 (61%), Positives = 551/729 (75%), Gaps = 53/729 (7%)
Query: 6 NGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSA--SLQWF 63
N GD NV + SS R GS K S+SG+STP+ SPSFRRL++SRTPRRE RS SL W
Sbjct: 5 NRGDFLGNVVKPSSLRPSGSFKPSVSGKSTPRGSPSFRRLHSSRTPRREARSTGFSLHWI 64
Query: 64 RSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIAN 123
R+N++++WLLLITLW YLGFYVQSRWAHGEN D+FLGFGG++ N+ +DS QN+ LI+
Sbjct: 65 RNNKVLFWLLLITLWAYLGFYVQSRWAHGENKDEFLGFGGQQSNQKLDSEQNQSLSLIST 124
Query: 124 HSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSSRGKGRGKQKAKL 183
++ L + N + + +D +++VL ++ N ++ + RK+SKRS R K K K
Sbjct: 125 NNRLVVENRSGENDRSDGGVVNVVLAKKANGVSASKKTKPRKRSKRSKRDKVH-KGKIPA 183
Query: 184 DVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSR 243
+V ++ +E Q PEIP+ N+SYG+LVGPFG TEDRILEWSPEKRSGTCDRKGDFAR VWSR
Sbjct: 184 EVTNHDIEEQEPEIPLKNSSYGMLVGPFGSTEDRILEWSPEKRSGTCDRKGDFARLVWSR 243
Query: 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGE 303
+F+LIFHELSMTGAP+SMMELATELLSCGA+VSAV LSK+GGLM EL+RR+IKVL+D+ +
Sbjct: 244 RFVLIFHELSMTGAPISMMELATELLSCGASVSAVALSKKGGLMSELSRRRIKVLDDKAD 303
Query: 304 PSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVK 363
SFKT+MKADLVIAGSAVCA+WID YI FPAG SQV WWIMENRREYF+R+K+VLDRVK
Sbjct: 304 LSFKTAMKADLVIAGSAVCASWIDGYIEHFPAGASQVAWWIMENRREYFNRSKVVLDRVK 363
Query: 364 LLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR 423
+L+F+SE Q+KQWL W +EE +KLRSQPA+VPLSVNDELAFVAG +CSLNT +SSPEKM
Sbjct: 364 MLIFISELQSKQWLNWSQEENIKLRSQPAIVPLSVNDELAFVAGISCSLNTESSSPEKML 423
Query: 424 EKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKS 483
EK+ LLR++ RKEMG+ D D++V++LSSINPGKG LL+ES+ L+I++ DD KIR
Sbjct: 424 EKKQLLRNTTRKEMGVGDNDVVVMTLSSINPGKGHFLLLESSNLLIDRGLKRDDPKIRNP 483
Query: 484 RNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543
+ + L R ++ R LLQ +D
Sbjct: 484 DDSSPSRPKLARRRYM--RALLQKLND--------------------------------- 508
Query: 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSN 603
RR++L+ + + K+LIGSVGSKSNKV YVK +L FLSQHSN
Sbjct: 509 ---------------RRRLLADGGELPETSFKLLIGSVGSKSNKVVYVKRLLRFLSQHSN 553
Query: 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEI 663
LS+++LWTPATTRVASLYSAAD+YVINSQG+GETFGRVTIEAMAFG+PVLGTDAGGTKEI
Sbjct: 554 LSQSVLWTPATTRVASLYSAADIYVINSQGIGETFGRVTIEAMAFGLPVLGTDAGGTKEI 613
Query: 664 VEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723
VEHNVTGLLHP G PG QVLAQNL +LLKNP VRE+M EGRKKV+++YLK+HMYKK +
Sbjct: 614 VEHNVTGLLHPLGRPGTQVLAQNLEFLLKNPQVREKMGAEGRKKVKKIYLKRHMYKKFVE 673
Query: 724 VIYKCMKPK 732
VI KCM+ K
Sbjct: 674 VIVKCMRTK 682
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555993|ref|XP_003546312.1| PREDICTED: uncharacterized protein LOC100793827 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/736 (62%), Positives = 549/736 (74%), Gaps = 39/736 (5%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSA-- 58
ME+S+N G+ N+A+QSS R GGS KS+LSGRSTP+NSPSFRRLN+ RTPR+E RS+
Sbjct: 1 MEESINRGEYQPNLAKQSSLRLGGSFKSTLSGRSTPRNSPSFRRLNSGRTPRKEGRSSVG 60
Query: 59 SLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
WFRSNRL+ WLLLITLW YLGF+VQSRWAH + ++F G+G RN D+ Q +RR
Sbjct: 61 GALWFRSNRLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGYGTGPRNTNSDAEQIQRR 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSK--RSSRGKGR 176
DL+A++ L NN T + SK I++ L + N+ S R + + +SK RSS+GK R
Sbjct: 121 DLLASNKSLSANNDTDADIAGISKTINVALAKNDNDVPSHRKTSSKNRSKGRRSSKGKSR 180
Query: 177 GKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDF 236
GK K ++++ +E Q PEIP TN++YGLLVGPFG EDRILEWSPEKRSGTC+RK DF
Sbjct: 181 GKLKPTTEIKNTDIEEQEPEIPTTNSTYGLLVGPFGPMEDRILEWSPEKRSGTCNRKEDF 240
Query: 237 ARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIK 296
AR VWSR+FILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS++GGLM ELARR+IK
Sbjct: 241 ARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSRKGGLMSELARRRIK 300
Query: 297 VLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAK 356
VLED+ + SFKT+MKADLVIAGSAVCA+WI+QYI FPAG SQV WWIMENRREYFDR+K
Sbjct: 301 VLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRSK 360
Query: 357 LVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPT 416
VL RVK+LVFLSESQ+KQW WCEEE +KLRS P +VPLSVNDELAFVAG +LNTP+
Sbjct: 361 DVLHRVKMLVFLSESQSKQWQKWCEEESIKLRSHPEIVPLSVNDELAFVAGIPSTLNTPS 420
Query: 417 SSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMD 476
S EKM EK+ LLR+SVRKEMGLTD DMLV+SLSSINPGKGQLLL+ES ++EQ S
Sbjct: 421 FSTEKMVEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGQSPG 480
Query: 477 DSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536
D K+++ N+ SSL +H +R L + V +S + S
Sbjct: 481 DKKMKEVSNIKEGLSSLARKHRIRKLLPLMSNGKVASNSISSNSLSR------------- 527
Query: 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILE 596
R++VL G QQ+LK+LIGSV SKSNK YVK +L
Sbjct: 528 ----------------------RKQVLPNDKGTIQQSLKLLIGSVRSKSNKADYVKSLLS 565
Query: 597 FLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656
FL QH N S ++ WTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG+PVLGTD
Sbjct: 566 FLEQHPNTSTSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTD 625
Query: 657 AGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKH 716
AGGT+EIVEHNVTGLLHP GHPG VLAQNL +LLKN S R++M + GRKKV++MYLK+
Sbjct: 626 AGGTQEIVEHNVTGLLHPVGHPGNLVLAQNLWFLLKNQSARKQMGVVGRKKVQKMYLKQQ 685
Query: 717 MYKKLSQVIYKCMKPK 732
MYK +VI +CM+ K
Sbjct: 686 MYKNFVEVIARCMRSK 701
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547414|ref|XP_003542107.1| PREDICTED: uncharacterized protein LOC100795000 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/736 (61%), Positives = 542/736 (73%), Gaps = 39/736 (5%)
Query: 1 MEDSLNGGDLHVNVARQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSA-- 58
ME+S+N G+ N+A+QSS R GGS KS+LSGRS P+NSPSFRRLN+ RTPR+E R +
Sbjct: 1 MEESINRGEYQPNLAKQSSLRLGGSFKSTLSGRSNPRNSPSFRRLNSVRTPRKEGRISVG 60
Query: 59 SLQWFRSNRLVYWLLLITLWTYLGFYVQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRR 118
WFRSN L+ WLLLITLW YLGF+VQSRWAH + ++F GFG RN D+ Q +RR
Sbjct: 61 GALWFRSNHLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNTDAEQIQRR 120
Query: 119 DLIANHSDLDINNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSSRGKGRGK 178
DL+A+ L NN T + SK I + L ++ N+ S R + +K+SK KG+ +
Sbjct: 121 DLLASDKSLSANNETGADIAGISKTISVALAKKDNDVPSHRKTSSKKRSKSRRSSKGKSR 180
Query: 179 Q--KAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDF 236
K ++++ +E Q PEIP TN +YGLLVGPFG EDRILEWSPEKRSGTC+RK DF
Sbjct: 181 GKLKPTTEIKNTDIEEQEPEIPTTNNTYGLLVGPFGPMEDRILEWSPEKRSGTCNRKEDF 240
Query: 237 ARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIK 296
AR VWSR+FILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS++GGLM ELARR+IK
Sbjct: 241 ARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSRKGGLMSELARRRIK 300
Query: 297 VLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAK 356
VLED+ + SFKT+MKADLVIAGSAVCA+WI+QYI FPAG SQV WWIMENRREYFDR+K
Sbjct: 301 VLEDKSDLSFKTAMKADLVIAGSAVCASWIEQYIDHFPAGASQVAWWIMENRREYFDRSK 360
Query: 357 LVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPT 416
+L RVK+LVFLSESQ+KQW WCEEE +KLRS P +V LSVN+ELAFVAG +LNTP+
Sbjct: 361 DILHRVKMLVFLSESQSKQWQKWCEEESIKLRSLPEIVALSVNEELAFVAGIPSTLNTPS 420
Query: 417 SSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMD 476
S EKM EK+ LLR+SVRKEMGLTD DMLV+SLSSINPGKGQLLL+ES ++EQ D
Sbjct: 421 FSTEKMVEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGQLQD 480
Query: 477 DSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536
D K++K N+ SSLT +H +R L + V +S + S
Sbjct: 481 DKKMKKVSNIKEGLSSLTRKHRIRKLLPLMKNGKVASNSISSNSLSR------------- 527
Query: 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILE 596
R++VL G QQ+LK+LIGSV SKSNK YVK +L
Sbjct: 528 ----------------------RKQVLPNGKGTIQQSLKLLIGSVRSKSNKADYVKSLLS 565
Query: 597 FLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656
FL QH N S ++ WTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMA+G+PVLGTD
Sbjct: 566 FLEQHPNASTSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAYGLPVLGTD 625
Query: 657 AGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKH 716
AGGT+EIVE+NVTGLLHP GHPG VLAQNLR+LLKN R++M +EGRKKV++MYLK+H
Sbjct: 626 AGGTREIVENNVTGLLHPVGHPGNDVLAQNLRFLLKNQLARKQMGVEGRKKVQKMYLKQH 685
Query: 717 MYKKLSQVIYKCMKPK 732
MYK +VI +CM+ K
Sbjct: 686 MYKNFVEVITRCMRSK 701
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233237|ref|NP_188215.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|334185383|ref|NP_001189906.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|9294599|dbj|BAB02880.1| glycosyl transferases-like protein [Arabidopsis thaliana] gi|20147191|gb|AAM10311.1| AT3g15940/MVC8_7 [Arabidopsis thaliana] gi|22796166|emb|CAD45267.1| putative glycosyltransferase [Arabidopsis thaliana] gi|332642228|gb|AEE75749.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|332642229|gb|AEE75750.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/721 (61%), Positives = 551/721 (76%), Gaps = 48/721 (6%)
Query: 24 GSLKSSLSGRSTPKNSPSFRRLNASRTPRREVRSA--SLQWFRSNRLVYWLLLITLWTYL 81
GS KSSLSGRSTP+ SP+ R++++ RTPRRE + + ++QWFRSNRL+YWLLLITLWTYL
Sbjct: 12 GSFKSSLSGRSTPRGSPTLRKVHSGRTPRREGKGSGGAVQWFRSNRLLYWLLLITLWTYL 71
Query: 82 GFYVQSRWAHGENND-KFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGT-IKTLGA 139
GFYVQSRWAH ++N +FL FGGK R +++ QNKRRDL+A+ S + + T I LG
Sbjct: 72 GFYVQSRWAHDDDNKVEFLRFGGKLREDVLHVEQNKRRDLVADESSHAVVDHTNIVHLGV 131
Query: 140 DSKKIDMVLTQRRNNDASRRSVAKRK--KSKRSSRGKGRGKQKAKLDVESNYMEAQLPEI 197
+ K++ + L ++ ++ + R +R+ K+ RSSR + R QK + +E+ ++ Q E+
Sbjct: 132 N-KRMHVTLAKKEDSTSRRSVSPRRRTRKASRSSRTRIRSTQKVRKVMETKELDEQDQEL 190
Query: 198 PMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGA 257
P N +YG L GPFG EDRILEWSP+KRSGTCDRK DF R VWSR+F+L+FHELSMTGA
Sbjct: 191 PNINVTYGKLFGPFGSLEDRILEWSPQKRSGTCDRKSDFKRLVWSRRFVLLFHELSMTGA 250
Query: 258 PLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIA 317
P+SMMELA+ELLSCGATV AVVLS+RGGL+ EL RR+IKV+ED+GE SFKT+MKADLVIA
Sbjct: 251 PISMMELASELLSCGATVYAVVLSRRGGLLQELTRRRIKVVEDKGELSFKTAMKADLVIA 310
Query: 318 GSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWL 377
GSAVCA+WIDQY+ PAGGSQ+ WW+MENRREYFDRAK VLDRVKLL+FLSE Q+KQWL
Sbjct: 311 GSAVCASWIDQYMDHHPAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIFLSEVQSKQWL 370
Query: 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEM 437
TWCEE+ +KLRSQP +VPLSVNDELAFVAG + SLNTPT + E M+EKR LR+SVR E
Sbjct: 371 TWCEEDHVKLRSQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQKLRESVRTEF 430
Query: 438 GLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMD------DSKIRKSRN-VGRKK 490
GLTD+DMLV+SLSSINPGKGQLLL+ES L +E+E + + SKI K+ N + ++K
Sbjct: 431 GLTDKDMLVMSLSSINPGKGQLLLLESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEK 490
Query: 491 SSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDA 550
SL++RH LRG SS ++ ++S P N PS+ ++ G
Sbjct: 491 ISLSARHRLRG------------SSRKMKITS--------PAVDN--HPSVLSATG---- 524
Query: 551 VSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610
RRK+L + Q+Q LK+L+GSVGSKSNKV YVKE+L FLS + NLS ++LW
Sbjct: 525 --------RRKLLLSGNVTQKQDLKLLLGSVGSKSNKVAYVKEMLSFLSNNGNLSNSVLW 576
Query: 611 TPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTG 670
TPATTRVASLYSAADVYV NSQG+GETFGRVTIEAMA+G+PVLGTDAGGTKEIVEHNVTG
Sbjct: 577 TPATTRVASLYSAADVYVTNSQGVGETFGRVTIEAMAYGLPVLGTDAGGTKEIVEHNVTG 636
Query: 671 LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730
LLHP G G +VLAQNL +LL+NPS R ++ +GR+ VE+MY+K+HMYK+ V+ KCM+
Sbjct: 637 LLHPVGRAGNKVLAQNLLFLLRNPSTRLQLGSQGREIVEKMYMKQHMYKRFVDVLVKCMR 696
Query: 731 P 731
P
Sbjct: 697 P 697
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297847636|ref|XP_002891699.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297337541|gb|EFH67958.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/724 (60%), Positives = 533/724 (73%), Gaps = 66/724 (9%)
Query: 16 RQSSFRQGGSLKSSLSGRSTPKNSPSFRRLNASRTPRR-EVRSASLQWFRSNRLVYWLLL 74
R S RQ S+KSSLSGRSTP+ +P RL++ RTPRR V + Q FRS+RLVYWLLL
Sbjct: 5 RLSPLRQT-SVKSSLSGRSTPRGTP---RLHSGRTPRRGHVGGGAFQLFRSSRLVYWLLL 60
Query: 75 ITLWTYLGFYVQSRWAH-GENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGT 133
ITLWTYLGFYVQSRWAH E+ +FL FGG+ R +++ + K D +AN + + N T
Sbjct: 61 ITLWTYLGFYVQSRWAHDNESKVEFLRFGGRPRTDVLYVEKIKGMDAVANENSEALVNIT 120
Query: 134 IKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSK---RSSRGKGRGKQKAKLDV-ESNY 189
K SK+ D+ L ++++ ASRRS++ ++K++ RSSR K RGKQK +V E+
Sbjct: 121 GKDDAGLSKRTDVSLI-KKDDGASRRSLSSKQKTRKTVRSSRSKVRGKQKVIKEVLETKD 179
Query: 190 MEA-QLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILI 248
++A Q P++P+TNA+YG L+GPFG ED++LEWSP +RSGTCDRK DF R VWSR+F+L+
Sbjct: 180 LDAEQDPQLPLTNATYGKLLGPFGSLEDKVLEWSPHRRSGTCDRKSDFKRLVWSRRFVLL 239
Query: 249 FHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKT 308
FHELSMTGAP+SMMELA+ELLSCGATVSAVVLS+RGGLM EL RR+IKV+ED+GE SFKT
Sbjct: 240 FHELSMTGAPISMMELASELLSCGATVSAVVLSRRGGLMQELTRRRIKVVEDKGELSFKT 299
Query: 309 SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFL 368
SMKADLVIAGSAVC +WIDQY+ PAGGSQ+ WWIMENRREYFDRAK VLD VK+L+FL
Sbjct: 300 SMKADLVIAGSAVCTSWIDQYMNHHPAGGSQIAWWIMENRREYFDRAKPVLDHVKMLIFL 359
Query: 369 SESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNL 428
SESQ++QWLTWCEEE +KLRSQP +VPLSVNDELAFVAG SLNTPT SPEKMREKR +
Sbjct: 360 SESQSRQWLTWCEEEHIKLRSQPVIVPLSVNDELAFVAGIPSSLNTPTLSPEKMREKRQI 419
Query: 429 LRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGR 488
LR+SVR E+GLTD DMLV+SLSSINP KGQLLL+ES L + + R + + R
Sbjct: 420 LRESVRMELGLTDADMLVMSLSSINPTKGQLLLLESIALALSERGKESQ---RNHKGIIR 476
Query: 489 K-KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGN 547
K K SL+S+H LRG SS ++ S S T L+ VR
Sbjct: 477 KEKVSLSSKHRLRG------------SSRQM--KSVSLT-LDNAVR-------------- 507
Query: 548 TDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKA 607
++Q LK+L+GSVGSKSNKV YVKE+L FLS++ NLSK+
Sbjct: 508 ---------------------SEKQELKVLLGSVGSKSNKVGYVKEMLSFLSKNGNLSKS 546
Query: 608 MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN 667
++WTPATTRVASLYSAADVYV NSQG+GETFGRVTIEAMA+G+ V+GTDAGGTKE+V+HN
Sbjct: 547 VMWTPATTRVASLYSAADVYVTNSQGVGETFGRVTIEAMAYGLAVVGTDAGGTKEMVQHN 606
Query: 668 VTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727
VTGLLH G G + LA NL YLL+N R R+ EGRK VE+MY+K+HMYK+ V+ K
Sbjct: 607 VTGLLHSMGRSGNKELAHNLLYLLRNADARLRLGSEGRKMVEKMYMKQHMYKRFVDVLVK 666
Query: 728 CMKP 731
CM+P
Sbjct: 667 CMRP 670
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| TAIR|locus:2093925 | 697 | AT3G15940 [Arabidopsis thalian | 0.636 | 0.668 | 0.577 | 1.6e-206 | |
| TAIR|locus:2018144 | 670 | AT1G52420 [Arabidopsis thalian | 0.651 | 0.711 | 0.549 | 1.4e-194 | |
| TAIR|locus:2013089 | 479 | AT1G19710 [Arabidopsis thalian | 0.273 | 0.417 | 0.363 | 4e-38 | |
| TAIR|locus:2018392 | 463 | AT1G75420 [Arabidopsis thalian | 0.273 | 0.431 | 0.369 | 7.1e-21 | |
| TIGR_CMR|CHY_0668 | 396 | CHY_0668 "glycosyl transferase | 0.187 | 0.345 | 0.314 | 2e-09 | |
| TIGR_CMR|BA_1558 | 381 | BA_1558 "glycosyl transferase, | 0.210 | 0.404 | 0.277 | 1.5e-06 | |
| TIGR_CMR|GSU_3023 | 2401 | GSU_3023 "glycosyl transferase | 0.131 | 0.039 | 0.356 | 1.7e-06 | |
| TIGR_CMR|CPS_4999 | 367 | CPS_4999 "glycosyl transferase | 0.254 | 0.506 | 0.267 | 3.4e-06 | |
| TIGR_CMR|DET_0978 | 382 | DET_0978 "glycosyl transferase | 0.146 | 0.280 | 0.324 | 6.3e-06 | |
| TIGR_CMR|CBU_0841 | 377 | CBU_0841 "glycosyl transferase | 0.209 | 0.405 | 0.266 | 1e-05 |
| TAIR|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1380 (490.8 bits), Expect = 1.6e-206, Sum P(2) = 1.6e-206
Identities = 277/480 (57%), Positives = 350/480 (72%)
Query: 35 TPKNSPSFRRLNASRTPRREVRSA--SLQWFRSNRXXXXXXXXXXXXXXGFYVQSRWAHG 92
TP+ SP+ R++++ RTPRRE + + ++QWFRSNR GFYVQSRWAH
Sbjct: 23 TPRGSPTLRKVHSGRTPRREGKGSGGAVQWFRSNRLLYWLLLITLWTYLGFYVQSRWAHD 82
Query: 93 ENND-KFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGT-IKTLGADSKKIDMVLTQ 150
++N +FL FGGK R +++ QNKRRDL+A+ S + + T I LG + K++ + L +
Sbjct: 83 DDNKVEFLRFGGKLREDVLHVEQNKRRDLVADESSHAVVDHTNIVHLGVN-KRMHVTLAK 141
Query: 151 RRNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXLD--VESNYMEAQLPEIPMTNASYGLLV 208
+ ++ + +E+ ++ Q E+P N +YG L
Sbjct: 142 KEDSTSRRSVSPRRRTRKASRSSRTRIRSTQKVRKVMETKELDEQDQELPNINVTYGKLF 201
Query: 209 GPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATEL 268
GPFG EDRILEWSP+KRSGTCDRK DF R VWSR+F+L+FHELSMTGAP+SMMELA+EL
Sbjct: 202 GPFGSLEDRILEWSPQKRSGTCDRKSDFKRLVWSRRFVLLFHELSMTGAPISMMELASEL 261
Query: 269 LSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQ 328
LSCGATV AVVLS+RGGL+ EL RR+IKV+ED+GE SFKT+MKADLVIAGSAVCA+WIDQ
Sbjct: 262 LSCGATVYAVVLSRRGGLLQELTRRRIKVVEDKGELSFKTAMKADLVIAGSAVCASWIDQ 321
Query: 329 YITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLR 388
Y+ PAGGSQ+ WW+MENRREYFDRAK VLDRVKLL+FLSE Q+KQWLTWCEE+ +KLR
Sbjct: 322 YMDHHPAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIFLSEVQSKQWLTWCEEDHVKLR 381
Query: 389 SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLS 448
SQP +VPLSVNDELAFVAG + SLNTPT + E M+EKR LR+SVR E GLTD+DMLV+S
Sbjct: 382 SQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQKLRESVRTEFGLTDKDMLVMS 441
Query: 449 LSSINPGKGQLLLVESAQLMIEQEPSMDD------SKIRKSRN-VGRKKSSLTSRHHLRG 501
LSSINPGKGQLLL+ES L +E+E + + SKI K+ N + ++K SL++RH LRG
Sbjct: 442 LSSINPGKGQLLLLESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEKISLSARHRLRG 501
|
|
| TAIR|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-194, Sum P(2) = 1.4e-194
Identities = 272/495 (54%), Positives = 338/495 (68%)
Query: 16 RQSSFRQXXXXXXXXXXXXTPKNSPSFRRLNASRTPRR-EVRSASLQWFRSNRXXXXXXX 74
R S RQ TP+ +P R+ + RTPRR + QWFRS+R
Sbjct: 5 RLSPLRQTSVKSSLSGRS-TPRGTP---RVYSGRTPRRGHGGGGAFQWFRSSRLVYWLLL 60
Query: 75 XXXXXXXGFYVQSRWAH-GENNDKFLGFGGKRRNEIVDSNQNKRRDLIANHSDLDINNGT 133
GFYVQSRWAH E+ +FL FGG+ R + + + K D++AN + + N T
Sbjct: 61 ITLWTYLGFYVQSRWAHDNESKVEFLRFGGRPRKDELYMEKIKGLDVVANENSEALVNIT 120
Query: 134 IKTLGADSKKIDMVLTQRRNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXLDVESNYMEA- 192
K +K+ D+ L ++ +D V +E
Sbjct: 121 GKDDAGSNKRTDVSLIKK--DDGVSRRSLSSKQKTRKTVRTSRSKIRVKQKVIKEVLETK 178
Query: 193 -----QLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFIL 247
Q P++P+TNA+YG L+GPFG ED++LEWSP +RSGTCDRK DF R VWSR+F+L
Sbjct: 179 DLDDEQDPQLPLTNATYGKLLGPFGSLEDKVLEWSPHRRSGTCDRKSDFKRLVWSRRFVL 238
Query: 248 IFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFK 307
+FHELSMTGAP+SMMELA+ELLSCGATVSAVVLS+RGGLM EL+RR+IKV+ED+GE SFK
Sbjct: 239 LFHELSMTGAPISMMELASELLSCGATVSAVVLSRRGGLMQELSRRRIKVVEDKGELSFK 298
Query: 308 TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVF 367
T+MKADL+IAGSAVC +WIDQY+ PAGGSQ+ WWIMENRREYFDRAK VLDRVK+L+F
Sbjct: 299 TAMKADLIIAGSAVCTSWIDQYMNHHPAGGSQIAWWIMENRREYFDRAKPVLDRVKMLIF 358
Query: 368 LSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRN 427
LSESQ++QWLTWCEEE +KLRSQP +VPLSVNDELAFVAG SLNTPT SPEKMR KR
Sbjct: 359 LSESQSRQWLTWCEEEHIKLRSQPVIVPLSVNDELAFVAGIPSSLNTPTLSPEKMRVKRQ 418
Query: 428 LLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVG 487
+LR+SVR E+G+TD DMLV+SLSSINP KGQLLL+ES L + + +S+ R + +
Sbjct: 419 ILRESVRTELGITDSDMLVMSLSSINPTKGQLLLLESIALALSERGQ--ESQ-RNHKGII 475
Query: 488 RK-KSSLTSRHHLRG 501
RK K SL+S+H LRG
Sbjct: 476 RKEKVSLSSKHRLRG 490
|
|
| TAIR|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 285 (105.4 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 77/212 (36%), Positives = 116/212 (54%)
Query: 528 LNEPVRKNLLSPSLFTSIGNTDAVSFGSG--------HLRRKVLSKSDGKQQQALK-ILI 578
L E VR++L + G ++VS G G H KV+ ++ + + +++
Sbjct: 258 LREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKVIKETKKLEVPTMHAVVV 317
Query: 579 GSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETF 638
GS S K + E+ F+ Q L K + + T +VA +A DV V NSQ GE F
Sbjct: 318 GSDMSAQTK--FETELRNFV-QEMKLQKIVHFVNKTMKVAPYLAAIDVLVQNSQARGECF 374
Query: 639 GRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRE 698
GR+TIEAMAF +PVLGT AGGT EIV + TGLLH G G LA+N+ L N +R
Sbjct: 375 GRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNTGKDGVLPLAKNIVKLATNVKMRN 434
Query: 699 RMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730
M +G ++V+ M+L+ HM +++ V+ + ++
Sbjct: 435 TMGKKGYERVKEMFLEHHMSHRIASVLREVLQ 466
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| TAIR|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 273 (101.2 bits), Expect = 7.1e-21, P = 7.1e-21
Identities = 78/211 (36%), Positives = 114/211 (54%)
Query: 528 LNEPVRKNLLSPSLFTSIGNTDAVSFGSGH---LR--RKVLSKSDGKQQQALK---ILIG 579
L E VR++L + G ++VS G G LR + L + K+ Q +++G
Sbjct: 248 LREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVVG 307
Query: 580 SVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFG 639
S SK K + E+ F+ + L + + T VA +A DV V NSQ GE FG
Sbjct: 308 SDMSKQTK--FETELRNFVRE-KKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFG 364
Query: 640 RVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRER 699
R+TIEAMAF +PVLGT AGGT EIV + TGLLH G G LA+N+ L +R R
Sbjct: 365 RITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQVELRLR 424
Query: 700 MAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730
M G ++V+ M+L+ HM +++ V+ + ++
Sbjct: 425 MGKNGYERVKEMFLEHHMSHRIASVLKEVLQ 455
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| TIGR_CMR|CHY_0668 CHY_0668 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 591 VKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV 650
V+EI++ + ++ K + + +Y AD+ + S E FG V +EAMA G
Sbjct: 259 VQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSS-FEEPFGLVMLEAMASGK 317
Query: 651 PVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
P++ T++GG E+V+ V G + P A LA+ L LL++ +R RM GRK E
Sbjct: 318 PIIVTNSGGMPEVVQDGVNGFVIPK--KDASALARKLILLLEDDELRRRMGESGRKLAEE 375
Query: 711 MYLKKHMYKKLSQVIYKCMK 730
+ K M +V K +K
Sbjct: 376 KFTVKVMTDNTEKVYQKLLK 395
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| TIGR_CMR|BA_1558 BA_1558 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 572 QALKILIGSVGSKSNKV---PYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYV 628
QA ++ V +K V P IL+ L ++ ++ +L+ VA L + +D+ +
Sbjct: 218 QAFAKIVTEVDAKLLLVGDGPEFCTILQ-LVKNLHIEDRVLFLGKQDNVAELLAMSDLML 276
Query: 629 INSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLR 688
+ S+ E+FG V +EAMA GVP +GT GG E+++H TG L G V Q ++
Sbjct: 277 LLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTG-VADQAIQ 333
Query: 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730
LLK+ + M R+ V + + + + + Y ++
Sbjct: 334 -LLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 374
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| TIGR_CMR|GSU_3023 GSU_3023 "glycosyl transferase, group 1/2 family protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 152 (58.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP 674
TR+A +YS AD++V+ S + + IE+MA G+PV+G GG +++EH V G L
Sbjct: 617 TRLAQIYSLADLFVLPS--MEDNLPNTVIESMACGIPVVGFKIGGMPDMIEHKVNGYLAQ 674
Query: 675 PGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKK 715
PG L + +R+ L N S ++ R+KVE Y ++
Sbjct: 675 PGDVTG--LTEGIRWCLANASAL-KLGERCREKVELEYSQR 712
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| TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 54/202 (26%), Positives = 88/202 (43%)
Query: 526 TQLNEPVRKNL---LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVG 582
T +N+ R +L L + SIG+ + GH V K AL + I G
Sbjct: 173 TSINK-ARADLGIPLDQLMLLSIGHLGEIK---GHQDTLVALSKFTKTMPALHLYIAGDG 228
Query: 583 SKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVT 642
+ K + E++ L + N++ + S A D+++ S + E FG V
Sbjct: 229 AAQEKQK-LTELVNKLQINENVT----FLGQINNAFSWLEACDIFIQPS--VEEAFGLVF 281
Query: 643 IEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702
+EA A PV+ T GG KEI+ TGLL P P A + L L+ +P +R++
Sbjct: 282 VEAGAKAKPVIATTVGGIKEIIVSKETGLLVLPSSPKA--VEHALAILINSPPLRQQYGE 339
Query: 703 EGRKKVERMYLKKHMYKKLSQV 724
G K++ + +M K + +
Sbjct: 340 NGYKRITEHFSLTNMVNKYTDI 361
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| TIGR_CMR|DET_0978 DET_0978 "glycosyl transferase, group 1 family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 613 ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLL 672
A + Y A +Y + G E+FG V +EAMA GVP++ + G + ++ N GLL
Sbjct: 260 ACNELPRYYKTAHIYCSPATGQ-ESFGIVLLEAMALGVPIVASQIEGYQCVLTDNKEGLL 318
Query: 673 HPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723
PP + + LA+ L L+ P +R ++ G K V++ Y K + KK+ +
Sbjct: 319 VPPKN--SDKLAEALLKLIAQPDLRSELSAGGLKTVQQ-YSWKRVAKKVEE 366
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| TIGR_CMR|CBU_0841 CBU_0841 "glycosyl transferase, group 1 family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/165 (26%), Positives = 81/165 (49%)
Query: 569 KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYV 628
K+ A IL+G + S+ N ++ LE+ + W +T + ++ A++
Sbjct: 222 KKIDACFILVGGIDSE-NPAAINQKQLEYWESEGLIE----WWGESTEMLAIMHRANIVC 276
Query: 629 INSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLR 688
+ S G RV +EA A G ++ TD G +++V GLL P + ++ LA +
Sbjct: 277 LPSYREG--LPRVLVEAAASGRAIVTTDVPGCRDVVCDGENGLLVPVKN--SEELASAIE 332
Query: 689 YLLKNPSVRERMAMEGRKKVERMY-LKKHMYKKLSQVIYKCMKPK 732
L++NP +R+ M GR +VE Y L K ++ + ++Y+ + K
Sbjct: 333 ILIQNPELRKEMGRRGRARVESKYELDKINFQTM--MVYETLLKK 375
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00034440001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (714 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 732 | |||
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 4e-30 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-25 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 3e-22 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 3e-22 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 4e-22 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-21 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 3e-21 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 3e-21 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 8e-21 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 9e-21 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 3e-18 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-17 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-16 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 5e-16 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 1e-15 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-15 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 1e-15 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-15 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 5e-15 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 3e-14 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 4e-14 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 9e-14 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 1e-13 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 4e-12 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 4e-12 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 2e-11 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 2e-11 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 1e-10 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-10 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 3e-10 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 6e-10 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 7e-10 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 1e-09 | |
| cd03818 | 396 | cd03818, GT1_ExpC_like, This family is most closel | 8e-09 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 1e-08 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-08 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 5e-08 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 5e-08 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 2e-07 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 2e-06 | |
| PRK15427 | 406 | PRK15427, PRK15427, colanic acid biosynthesis glyc | 3e-06 | |
| PRK15179 | 694 | PRK15179, PRK15179, Vi polysaccharide biosynthesis | 6e-06 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 6e-06 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 9e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 3e-05 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 5e-05 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 8e-05 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 0.002 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-30
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG 676
+ +LY+AADV+V+ S L E FG V +EAMA G+PV+ +D GG E+VE TGLL PPG
Sbjct: 269 LPALYAAADVFVLPS--LYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPG 326
Query: 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726
P A LA+ + LL +P +R R+ R++V + + + +V Y
Sbjct: 327 DPEA--LAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 589 PYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF 648
P +E L + + V L +AADV+V+ S E RV +EAMA
Sbjct: 233 PAAILEIEKLGLEGRVE----FLGFRDDVPELLAAADVFVLPS--YREGLPRVLLEAMAM 286
Query: 649 GVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKV 708
G PV+ TD G +E V V G L PPG A LA + L+++P +R RM RK+
Sbjct: 287 GRPVIATDVPGCREAVIDGVNGFLVPPGDAEA--LADAIERLIEDPELRARMGQAARKRA 344
Query: 709 ERMYLKKHMYKKLSQ 723
E + ++ + KKL +
Sbjct: 345 EEEFDEEIVVKKLLE 359
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cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 3e-22
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
V + Y+AADV+V+ S L E FG V +EAMA G+PV+ TD GG EI+ GLL PP
Sbjct: 271 EVPAYYAAADVFVLPS--LREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPP 328
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724
G P A LA+ + LL +P R+ R++V + +++ ++L ++
Sbjct: 329 GDPEA--LAEAILRLLADPW--LRLGRAARRRVAERFSWENVAERLLEL 373
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wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 98.8 bits (247), Expect = 3e-22
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG 676
+A+ Y++ADV+V S ETFG V +EAMA G+PV+ DAGG +IV GLL PG
Sbjct: 260 LAAAYASADVFVFPS--RTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPG 317
Query: 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
A A L LL +P +R RMA R + ER
Sbjct: 318 DAEA--FAAALAALLADPELRRRMAARARAEAER 349
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 4e-22
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP 674
+A +YSAADV+V+ S L E F IEA+A G PV+ D GG +IV+H VTG L
Sbjct: 256 ESLALIYSAADVFVVPS--LQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAK 313
Query: 675 PGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVE-----RMYLKKH--MYKKL 721
PG P LA+ + +LL +P RE + R+ E R+ K++ +Y++L
Sbjct: 314 PGDPED--LAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 2e-21
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 592 KEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP 651
+E LE L + L ++ T + Y+ A ++V+ S+ E F V +EAMAFG+P
Sbjct: 221 REALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLP 278
Query: 652 VLGTDA-GGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
V+ D G EI+E V GLL P G A LA+ L L+++ +R+RM R+ ER
Sbjct: 279 VISFDCPTGPSEIIEDGVNGLLVPNGDVEA--LAEALLRLMEDEELRKRMGANARESAER 336
Query: 711 MYLKKHMYKK 720
+ +++ K+
Sbjct: 337 -FSIENIIKQ 345
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AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 3e-21
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 569 KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VASLYSAADV 626
+Q LK++I VG + K L+ L +++ + LY AD+
Sbjct: 29 EQHPNLKLVI--VGDGEEEKKLKKLALKL-----GLEDNVIFVGFVPDEDLIELYRIADL 81
Query: 627 YVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQN 686
+V+ S+ E FG V +EAMA GVPV+ TD GG EIV+ TGLL PG A LA+
Sbjct: 82 FVLPSRY--EGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEA--LAEA 137
Query: 687 LRYLLKNPSVRERMAMEGRK 706
+ LLK+ +RER+ RK
Sbjct: 138 IEKLLKDEELRERLGENARK 157
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Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 95.7 bits (239), Expect = 3e-21
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 615 TRVASLYSAADVYV----INSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTG 670
V L AAD++V + G E V +EAMA G+PV+ TD G E+VE TG
Sbjct: 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETG 306
Query: 671 LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
LL PPG P A LA + LL +P +R M GR +VE
Sbjct: 307 LLVPPGDPEA--LADAIERLLDDPELRREMGEAGRARVEE 344
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 8e-21
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+ +LY AADV+V + L E FG +EAMA G+PV+ T GG ++IV VTGLL P
Sbjct: 295 DLPALYRAADVFVNPA--LYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDP 352
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMY 712
P A LA LR LL +P++R R++ G ++ Y
Sbjct: 353 RDPEA--LAAALRRLLTDPALRRRLSRAGLRRARARY 387
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 94.6 bits (234), Expect = 9e-21
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+A L ++ADV+V+ S L E FG V +EAMA G PV+ +D GG E+VE TGLL PP
Sbjct: 269 ELAELLASADVFVLPS--LSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPP 326
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKPK 732
G LA L LL++P +RE + R++VE + + + ++L ++ + + K
Sbjct: 327 GDVEE--LADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 3e-18
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD-AGGTKEIVEHNVTGLLHPP 675
A+L +A DV+V S E FG V +EAMAFG PV+ T+ G + H VTGL+ PP
Sbjct: 257 KAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPP 316
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHM 717
G P A LA+ +R LL++P +RER+ R++ E + M
Sbjct: 317 GDPAA--LAEAIRRLLEDPELRERLGEAARERAEEEFTADRM 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 3e-17
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
VA L S +D++++ S+ E+FG +EAMA GVPV+ ++AGG E+VEH VTG L
Sbjct: 265 DVAELLSISDLFLLPSEK--ESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDV 322
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKH---MYKKL 721
G + +A+ LL++ + +R + R++ + + + Y+ L
Sbjct: 323 GD--VETMAEYAISLLEDEELLQRFSAAARERAKERFDSEKIVPQYEAL 369
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 592 KEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP 651
+E LE L++ L+ + + + AAD++V++S E F V +EAMA G P
Sbjct: 232 REELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSS--RYEGFPNVLLEAMALGTP 289
Query: 652 VLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV-LAQNLRYLLKNPSVRERMAMEGRKKVER 710
V+ TD G +EI+E GLL P G A A L LL +P +RER+A R++V R
Sbjct: 290 VVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAR 349
Query: 711 MYLK 714
Y K
Sbjct: 350 EYSK 353
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 5e-16
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG 676
V +L +A DV+V++S L E F V +EAMA G+PV+ TD G E+V TG L PPG
Sbjct: 262 VPALLNALDVFVLSS--LSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPG 317
Query: 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVE 709
P A LA+ + LL +P++R+ + R+++E
Sbjct: 318 DPEA--LAEAIEALLADPALRQALGEAARERIE 348
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 1e-15
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 561 KVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VA 618
+ ++ ++ +++G G P +E LE L++ L+ +++T R +
Sbjct: 222 RAFARLLKEEPDVKLVIVGD-G------PEREE-LEELARELGLADRVIFTGFVPREELP 273
Query: 619 SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHP 678
Y AAD++V S ET G V +EAMA G+PV+ DA G ++V G L PPG
Sbjct: 274 DYYKAADLFVFASTT--ETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE 331
Query: 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724
LA+ L LL++P +R R++ + E+ K + K +V
Sbjct: 332 A---LAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 1e-15
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 576 ILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLG 635
+++G + Y E+LE L + L + + + + + Y+ AD+ V+++
Sbjct: 220 LIVGDAQGRRF---YYAELLE-LIKRLGLQDRVTFVGHCSDMPAAYALADI-VVSASTEP 274
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL-KNP 694
E FGR +EA A G PV+ +D GG +E V TGLL PPG A LAQ L +L P
Sbjct: 275 EAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEA--LAQALDQILSLLP 332
Query: 695 SVRERMAMEGRKKVERMYLKKHM 717
R +M + R VE ++ M
Sbjct: 333 EGRAKMFAKARMCVETLFSYDRM 355
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 1e-15
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLH 673
V L S AD++++ S+ E+FG +EAMA GVPV+ ++AGG E+V+H TG L
Sbjct: 261 QDHVEELLSIADLFLLPSEK--ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV 318
Query: 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKH 716
G + +A+ LL++ + + + R + + +
Sbjct: 319 DVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSER 359
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 4e-15
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 616 RVASLYSAADVYVINSQ----GLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGL 671
V L A +++ S G E V +EA A GVPV+ T GG E VE TGL
Sbjct: 257 EVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGL 316
Query: 672 LHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724
L P G A LA L LL +P +R RM GR++VE + + KL +
Sbjct: 317 LVPEGDVAA--LAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 5e-15
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 593 EILEFLSQHSNLSKAMLWTP---ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG 649
E+ + ++ ++W + L S A+V+V S + E G V +EAMA G
Sbjct: 247 EVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPS--IYEPLGIVNLEAMACG 304
Query: 650 VPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV----LAQNLRYLLKNPSVRERMAMEGR 705
PV+ + GG E+V TG L PP + A LA+ + LL +P + ++M + GR
Sbjct: 305 TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGR 364
Query: 706 KKVERMY 712
K+ E +
Sbjct: 365 KRAEEEF 371
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 3e-14
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 33/187 (17%)
Query: 549 DAVSFG----SGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLS----- 599
D+ SF S +R ++ S G+ ++ L + +G +G++ N + ++K ++E L
Sbjct: 239 DSESFHPRFRSEEMRARL---SGGEPEKPLIVYVGRLGAEKN-LDFLKRVMERLPGARLA 294
Query: 600 ------QHSNLSKAMLWTPAT-------TRVASLYSAADVYVINSQGLGETFGRVTIEAM 646
L K TP ++ Y++ DV+V+ S+ ET G V +EAM
Sbjct: 295 FVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSES--ETLGFVVLEAM 352
Query: 647 AFGVPVLGTDAGGTKEIV---EHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAME 703
A GVPV+ AGG +I+ + TG L+ PG V + L LL +P +RERM
Sbjct: 353 ASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCV--EKLETLLADPELRERMGAA 410
Query: 704 GRKKVER 710
R++VE+
Sbjct: 411 AREEVEK 417
|
Length = 465 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 4e-14
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+ Y+ DV V+ S E F V EA+A GVPV+ +D GG E+V V GLL PP
Sbjct: 255 EIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPP 313
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMA 701
G A+ LA L L+ +P + ER+
Sbjct: 314 G--DAEDLAAALERLIDDPDLLERLR 337
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 9e-14
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 610 WTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNV 668
W P V +L A D++V+ S L E +EAMA G+PV+ T GG E+V+H V
Sbjct: 258 WLPGERDDVPALMQALDLFVLPS--LAEGISNTILEAMASGLPVIATAVGGNPELVQHGV 315
Query: 669 TGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVE 709
TG L PPG A LA+ L+ + +P+ R GR + E
Sbjct: 316 TGALVPPGDAVA--LARALQPYVSDPAARRAHGAAGRARAE 354
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVT----IEAMAFGVPVLGTDAGGTKEIVEHNVTGL 671
+ L +AADV + G F V+ E MA G PVL + G + E+VE GL
Sbjct: 287 ELPELLAAADV-GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGL 345
Query: 672 LHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKL 721
+ PPG P A LA + LL +P R M GR+ VE + ++ + ++L
Sbjct: 346 VVPPGDPEA--LAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERL 393
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 4e-12
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 620 LYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP----- 674
LY ADV V+ S E V IE M G+P++GT + G E++E + G P
Sbjct: 297 LYQIADVGVLPS--FHEQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIKEYR 354
Query: 675 -PGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKL 721
+ L Q L LL + ++M R++ Y + M + +
Sbjct: 355 DYVELDKKELVQKLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMRENM 402
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 4e-12
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 610 WTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVT 669
+A L +AADV+V+ S L E FG V +EAMA G+PV+ TD GG EIVE +T
Sbjct: 168 GLDPEELLALLLAAADVFVLPS--LREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLT 225
Query: 670 GLL 672
GLL
Sbjct: 226 GLL 228
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 2e-11
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPS 695
E FG V +EAM G PV+ ++GG E V TG L P P A+ + L +P
Sbjct: 310 EHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEE--FAEAMLKLANDPD 366
Query: 696 VRERMAMEGRKKVERMYLKKHMYKKL 721
+ +RM GRK+V+ + + ++L
Sbjct: 367 LADRMGAAGRKRVKEKFSTEAFAERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 2e-11
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+ L+SAADV V+ + +T V A+ FG PV+ T G +E V TGLL PP
Sbjct: 260 ELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGHAEE-VLDGGTGLLVPP 318
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERM 711
G P A LA+ +R LL +P + + + R +
Sbjct: 319 GDPAA--LAEAIRRLLADPELAQAL----RARAREY 348
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 1e-10
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 620 LYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG 679
L A+ V + S + E FG EA+ G PV+ GG +E TG L
Sbjct: 270 LQRASTVVLQKS--IREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDTV--- 324
Query: 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYL 713
+ A + YLL++P +R +M R+ V +L
Sbjct: 325 -EEAAVRILYLLRDPELRRKMGANAREHVRENFL 357
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-10
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN------VT 669
V DV V+ S + E V +EAMA G+PV+ TD G +E++E
Sbjct: 363 NVKEYLPKLDVLVLTS--ISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPA 420
Query: 670 GLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHM---YKKL 721
G + PP P A LA+ + LLK+P +R M GRK+VER Y + M Y++L
Sbjct: 421 GEVVPPADPEA--LARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRL 473
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 3e-10
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 643 IEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702
+EAMA G V +D GG +E++ TG+L P G P A LA L LL N + +
Sbjct: 312 LEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDPAA--LAAALLALLDNRAQWPELRA 369
Query: 703 EGRKKVER 710
R+ VE
Sbjct: 370 AARRFVET 377
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 6e-10
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 569 KQQQALKILIGSVG-----SKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA 623
LK+++ VG SK K Y K++LE ++ ML ++ + Y
Sbjct: 220 TAHSNLKLVV--VGDPTASSKGEKAAYQKKVLE-AAKRIGDRCIMLGGQPPEKMHNYYPL 276
Query: 624 ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGL-LHPPGHPGAQV 682
AD+ V+ SQ + E F V +EAMA G PVL + GG E V +TG L P
Sbjct: 277 ADLVVVPSQ-VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTS--DS 333
Query: 683 LAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727
+ ++ L +P ++A + + V Y + + ++ + I+
Sbjct: 334 IISDINRTLADPE-LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
|
Length = 380 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 7e-10
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 36/156 (23%)
Query: 567 DGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADV 626
DG + L+ LI ++G SN+V + L + +A+ Y+AAD+
Sbjct: 227 DGPLRATLERLIKALGL-SNRV-------KLLGLRDD-------------IAAYYNAADL 265
Query: 627 YVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQN 686
+V++S E FG V EAMA +PV+ TDAGG +E+V +GL+ P P + LA
Sbjct: 266 FVLSS--AWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDP--EALANK 319
Query: 687 LRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLS 722
+ E + M G ++ ++ + KK S
Sbjct: 320 I---------DEILKMSGEERDIIGARRERIVKKFS 346
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 593 EILEFLSQHSNLSKAMLWT---PATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG 649
L+ ++ L + +T + A+ + AD++V+ S E FG V EA+A G
Sbjct: 249 AELKQIAAALGLEDRVTFTGMLYGEDK-AAALADADLFVLPSHS--ENFGIVVAEALACG 305
Query: 650 VPVLGTDAGGTKEIVEHN---VTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRK 706
PV+ TD +E++E+ V LA LR L+ P + M GR
Sbjct: 306 TPVVTTDKVPWQELIEYGCGWVVD-------DDVDALAAALRRALELPQRLKAMGENGRA 358
Query: 707 KVERMY 712
VE +
Sbjct: 359 LVEERF 364
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 8e-09
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 644 EAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAME 703
EAMA G V+G+D +E++ GLL P A LA + LL +P+ R R+
Sbjct: 319 EAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDA--LAAAVIELLDDPARRARLRRA 376
Query: 704 GRKKVERMYLKKHM 717
R+ R L
Sbjct: 377 ARRTALRYDLLSVC 390
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLL-- 672
+ +Y AADV + S E+FG V +EA A G PV+ GG V TGLL
Sbjct: 294 EELVHVYRAADVVAVPSYN--ESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVD 351
Query: 673 -HPPGHPGAQVLAQNLRYLLKNPSVRERMAMEG 704
H P A L LL +P R RM
Sbjct: 352 GHDPA-----DWADALARLLDDPRTRIRMGAAA 379
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-GTKEIVEHNVTGLL 672
T + +Y A + ++ SQ E FG +EA++ G+PV+ D G EI+E G L
Sbjct: 269 TRDLDEVYQKAQLSLLTSQS--EGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYL 326
Query: 673 HPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKK 720
P G + LA+ + LL +P + ++ + + ER Y ++++++K
Sbjct: 327 VPKG--DIEALAEAIIELLNDPKLLQKFSEAAYENAER-YSEENVWEK 371
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 5e-08
Identities = 20/37 (54%), Positives = 22/37 (59%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLL 672
E FG V IEAMA G PV+ G E+VE VTG L
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFL 291
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 5e-08
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 569 KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VASLYSAADV 626
+ K++I VG + + L L + + + +A+LY A
Sbjct: 222 AKGPDPKLVI--VGKRGWLNEELLARLRELGLGDRV----RFLGYVSDEELAALYRGARA 275
Query: 627 YVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQN 686
+V S L E FG +EAMA G PV+ ++ E+ L P P A LA
Sbjct: 276 FVFPS--LYEGFGLPVLEAMACGTPVIASNISSLPEVAGDA--ALYFDPLDPEA--LAAA 329
Query: 687 LRYLLKNPSVRERMAMEGRKKVER 710
+ LL++P++RE + G + +R
Sbjct: 330 IERLLEDPALREELRERGLARAKR 353
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 641 VTI-EAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRER 699
V+I EAM+FG+PV+ T+ GGT EIV++ GLL P L +L + N +
Sbjct: 325 VSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLL-LSKDPTPNELVSSLSKFIDNEEEYQT 383
Query: 700 MAMEGRKKVERMY 712
M + R+K E +
Sbjct: 384 MREKAREKWEENF 396
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-06
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPS 695
++ EA A G P+L G +E+ E +L+ + LA+ LRYLL +P
Sbjct: 9 DSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYR----DPEELAEKLRYLLADPE 64
Query: 696 VRERMAMEGRKKVERMYLKKHMYKK 720
R +A GR++V L +H Y+
Sbjct: 65 ERRAIAAAGRERV----LAEHTYEH 85
|
Length = 92 |
| >gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 643 IEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMA 701
+EAMA G+PV+ T G E+VE + +G L P AQ LAQ L + + +
Sbjct: 322 MEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND--AQALAQRLAAFSQLDTDELAPVV 379
Query: 702 MEGRKKVERMYLKKHMYKKLSQVI 725
R+KVE + ++ + ++L+ ++
Sbjct: 380 KRAREKVETDFNQQVINRELASLL 403
|
Length = 406 |
| >gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 6e-06
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 589 PYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF 648
P ++ + EF +Q + + +L+T + RV + + +++ S+ E V IEA
Sbjct: 558 PLLESVREF-AQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRF--EGLPNVLIEAQFS 614
Query: 649 GVPVLGTDAGGTKEIVEHNVTGLLHPPG---HPG-AQVLAQNLRYLLKNPSVRERMA 701
GVPV+ T AGG E V+ VTGL P P A+ LA+ +P + + A
Sbjct: 615 GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAA 671
|
Length = 694 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 6e-06
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK--- 692
E FG +EAM G+P T GG EI++ V+G P H G + + + + K
Sbjct: 654 EAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYH-GEEAAEKIVDFFEKCDE 712
Query: 693 NPSVRERMAMEGRKKVERMY 712
+PS ++++ G +++ Y
Sbjct: 713 DPSYWQKISQGGLQRIYEKY 732
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 9e-06
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLL 672
E FG V +EAMA G PV+ GG E V VTG+L
Sbjct: 271 EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
+A+L ++ADV + G +EA+A G+PV+ TD G + + E G+L
Sbjct: 62 DLAALLASADV-ALAPLRFGAGSPLKLLEALAAGLPVVATDI-GAEGLPEDLGWGVL-VA 118
Query: 676 GHPGAQVLAQNLRYLLKN 693
P A+ + LL +
Sbjct: 119 DDPEE--FAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 5e-05
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 20/136 (14%)
Query: 593 EILEFLSQHS-----NLSKAMLWTPATT---RVASLYSAADVYVINSQG------LGETF 638
EI E HS NL W A T R LY Y+ +++G L E F
Sbjct: 624 EIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYR----YIADTKGAFVQPALYEAF 679
Query: 639 GRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHP--GAQVLAQNLRYLLKNPSV 696
G +EAM G+P T GG EI+ V+G P H A +A ++PS
Sbjct: 680 GLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSY 739
Query: 697 RERMAMEGRKKVERMY 712
+++ G +++ Y
Sbjct: 740 WNKISDAGLQRIYECY 755
|
Length = 815 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 8e-05
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 634 LGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKN 693
L E FG +EA A G+P++ TD GG ++I+ + GLL A +A L L +
Sbjct: 349 LTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEA--IASALEDALSD 406
Query: 694 PSVRERMAMEGRKKVERMY 712
S + + G + V R Y
Sbjct: 407 SSQWQLWSRNGIEGVRRHY 425
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 619 SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD-AGGTKEIVEHNVTGLLHPPGH 677
+LY AD + S L E FG V +EA+A G+PV+ +D A T+ + P
Sbjct: 272 ALYRCADAFAFPS--LKEGFGLVVLEALASGIPVVASDIAPFTEYLGRF--DAAWADPSD 327
Query: 678 PGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERM 711
P + +A L L +P+ R + G + R
Sbjct: 328 PDS--IADALALAL-DPARRPALLAAGPELAARY 358
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.98 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.98 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.98 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.97 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.96 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.96 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.96 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.96 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.96 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.95 | |
| PLN00142 | 815 | sucrose synthase | 99.95 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.94 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.94 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.94 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.93 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.93 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.93 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.93 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.91 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.9 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.9 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.89 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.88 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.88 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.87 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.81 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.81 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.79 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.78 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.77 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.76 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.74 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.73 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.72 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.69 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.69 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.65 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.58 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.57 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.55 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.51 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.51 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.44 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.41 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.35 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.34 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.29 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.17 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.1 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.09 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.08 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.97 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.88 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.77 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.74 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.71 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.7 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.57 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.52 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.46 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.42 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.29 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.18 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.1 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.07 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.02 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.8 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.55 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.49 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.4 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.37 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.34 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.24 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.24 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.18 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.17 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.17 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.13 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 96.95 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.43 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 96.32 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 96.14 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.99 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 95.65 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 95.61 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.58 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 95.43 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.34 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 95.27 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 95.19 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 95.01 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 93.65 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 93.61 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 93.21 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 92.86 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 92.32 | |
| PLN02208 | 442 | glycosyltransferase family protein | 92.02 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 91.87 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 91.65 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 91.62 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 91.45 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 91.21 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 91.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 90.7 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 90.09 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 89.63 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 89.44 | |
| PLN02764 | 453 | glycosyltransferase family protein | 89.29 | |
| PLN00414 | 446 | glycosyltransferase family protein | 89.02 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 88.59 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 88.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 86.34 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 84.65 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.72 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 82.19 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 81.94 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 81.28 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 80.93 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 80.01 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=337.55 Aligned_cols=355 Identities=19% Similarity=0.274 Sum_probs=270.9
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch-----------hhhhc
Q 004760 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS-----------FKTSM 310 (732)
Q Consensus 242 ~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~-----------~~~~~ 310 (732)
+++|++|...++.||++.++++||++|.+.|+++.++++.+.+.+.+++...|++++..+.... +.++.
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~ 80 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQL 80 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHh
Confidence 4799999999999999999999999999999999999877767778888889999987764321 23378
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEee-----chhHhH--HHhhhhh-ccccEEEEecHHhHHHhhhHHHh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIME-----NRREYF--DRAKLVL-DRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e-----~r~~~~--~~~~~~l-~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
+||+||+++... +. ..+.+...+.+..++..|. .....+ ....... ...+.++++|+..... +..
T Consensus 81 ~~Divh~~~~~~--~~-~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~----~~~ 153 (374)
T TIGR03088 81 RPDIVHTRNLAA--LE-AQLPAALAGVPARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDW----LRG 153 (374)
T ss_pred CCCEEEEcchhH--HH-HHHHHHhcCCCeEEEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHH----HHH
Confidence 999999987432 22 2222333344432322211 000000 1111112 2367889999886432 210
Q ss_pred hhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHH
Q 004760 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLV 462 (732)
Q Consensus 383 e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LL 462 (732)
..+..+ ..+.+||||+|...|.+..... ...++....+++.++|+++|++.+.||++.++
T Consensus 154 ---~~~~~~-----------~~~~vi~ngvd~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li 213 (374)
T TIGR03088 154 ---PVKVPP-----------AKIHQIYNGVDTERFHPSRGDR------SPILPPDFFADESVVVGTVGRLQAVKDQPTLV 213 (374)
T ss_pred ---hcCCCh-----------hhEEEeccCccccccCCCccch------hhhhHhhcCCCCCeEEEEEecCCcccCHHHHH
Confidence 112221 2347899999999887653211 22333444567788999999999999999999
Q ss_pred HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcc
Q 004760 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (732)
Q Consensus 463 eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf 542 (732)
+|+..+.++.+..
T Consensus 214 ~a~~~l~~~~~~~------------------------------------------------------------------- 226 (374)
T TIGR03088 214 RAFALLVRQLPEG------------------------------------------------------------------- 226 (374)
T ss_pred HHHHHHHHhCccc-------------------------------------------------------------------
Confidence 9999998776531
Q ss_pred cccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHH
Q 004760 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYS 622 (732)
Q Consensus 543 ~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lys 622 (732)
.+..+++++|+|+..+.++..+. .+++.+++.|+|+.+++.++|+
T Consensus 227 --------------~~~~~l~i~G~g~~~~~~~~~~~---------------------~~~~~~~v~~~g~~~~~~~~~~ 271 (374)
T TIGR03088 227 --------------AERLRLVIVGDGPARGACEQMVR---------------------AAGLAHLVWLPGERDDVPALMQ 271 (374)
T ss_pred --------------ccceEEEEecCCchHHHHHHHHH---------------------HcCCcceEEEcCCcCCHHHHHH
Confidence 01246888999876666655543 3377889999999999999999
Q ss_pred HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 623 AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702 (732)
Q Consensus 623 aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~ 702 (732)
+||++|+||. .|+||++++|||+||+|||+|+.||..|+++++.+|++++++|+ ++|+++|..++++++.+.+|++
T Consensus 272 ~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~--~~la~~i~~l~~~~~~~~~~~~ 347 (374)
T TIGR03088 272 ALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDA--VALARALQPYVSDPAARRAHGA 347 (374)
T ss_pred hcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCH--HHHHHHHHHHHhCHHHHHHHHH
Confidence 9999999998 99999999999999999999999999999999999999999888 9999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 703 EGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 703 ~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
++++.++++|+|+.+++++.++|++++
T Consensus 348 ~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 348 AGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=366.05 Aligned_cols=458 Identities=24% Similarity=0.242 Sum_probs=379.0
Q ss_pred CCCCCCcccee-eEeeccchhhcCCCCCCCCcccceeeccCCcchhhhcccCcccccccccccchhhhhccCCeEEEEeC
Q 004760 172 RGKGRGKQKAK-LDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFH 250 (732)
Q Consensus 172 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kIllI~h 250 (732)
....+-.||.. ..++..+..++.|+.|..+.+|+...+++|.-|+++++|++..++ +|| +-. .+.++++.+++++|
T Consensus 6 ~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-~~~-~lg-~~d~G~qV~~l~~h 82 (495)
T KOG0853|consen 6 SSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-GQD-VLG-LPDTGGQVVYLTSH 82 (495)
T ss_pred hhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-ccc-ccC-CCCCCceEEEEehh
Confidence 34455566664 333344444788999999999999999999999999999999999 888 656 99999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHH-CCCEEEEEEeCCCC--CChhHHHhCCcEEEEcCCCchhhhhcCccEEEeCCchhhHHHH
Q 004760 251 ELSMTGAPLSMMELATELLS-CGATVSAVVLSKRG--GLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWID 327 (732)
Q Consensus 251 ~ls~gGA~~~~~eLA~~L~~-~G~~V~vv~l~~~g--~l~~el~~~gI~v~~~~~~~~~~~~~k~DlVia~Sav~~~~i~ 327 (732)
..+++ +|.+++.++..|.- ++..|+...+.+.. .+.+.....++.++..+....++..++.|++|++++.|..|+.
T Consensus 83 ~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~~~~~~l~ 161 (495)
T KOG0853|consen 83 EDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFVSACVPLL 161 (495)
T ss_pred hhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchHHHHHHHH
Confidence 99999 99999999998876 77777777776665 3677778899999999998878888999999999999999999
Q ss_pred HHHHhhcCCCccEEEEEeechhHhHHH--hhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceE
Q 004760 328 QYITRFPAGGSQVVWWIMENRREYFDR--AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFV 405 (732)
Q Consensus 328 ~~i~~~~~~~~~ivw~i~e~r~~~~~~--~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v 405 (732)
.++.+ +...++++||+|+.+..++.+ ....+.+...-.+-++.+..+|++|+.+.++....++..+++++++.
T Consensus 162 ~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~---- 236 (495)
T KOG0853|consen 162 KQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDI---- 236 (495)
T ss_pred HHhcC-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCc----
Confidence 99988 888899999999999998887 34555556666677788888899999999999999999999999986
Q ss_pred EeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccc
Q 004760 406 AGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRN 485 (732)
Q Consensus 406 ~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~ 485 (732)
.+.+.++|...+.+ ++.+++...+..+|.+.+....++++..+-++.|+||++++++|+..+....+..
T Consensus 237 ~~~y~ei~~s~~~~-~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~---------- 305 (495)
T KOG0853|consen 237 TSTYPEIDGSWFTY-GQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEP---------- 305 (495)
T ss_pred ceeeccccchhccc-cccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCC----------
Confidence 78888888888776 2334444466778888999988999999999999999999999999886655431
Q ss_pred cccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEec
Q 004760 486 VGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK 565 (732)
Q Consensus 486 i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lliv 565 (732)
.+ ...+++++
T Consensus 306 ------~~----------------------------------------------------------------~~~hl~~~ 315 (495)
T KOG0853|consen 306 ------SI----------------------------------------------------------------SSEHLVVA 315 (495)
T ss_pred ------CC----------------------------------------------------------------CceEEEEe
Confidence 00 11244455
Q ss_pred cCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCC-CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHH
Q 004760 566 SDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNL-SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIE 644 (732)
Q Consensus 566 G~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l-~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilE 644 (732)
|+- +..+..+++..|++++.+.+.+. ++ .+.|.|+..+++...|+.+||+.+..++.-.|+||+|++|
T Consensus 316 g~~----------G~d~~~sen~~~~~el~~lie~~-~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IE 384 (495)
T KOG0853|consen 316 GSR----------GYDERDSENVEYLKELLSLIEEY-DLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIE 384 (495)
T ss_pred cCC----------CccccchhhHHHHHHHHHHHHHh-CccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHH
Confidence 532 12344566778999998888766 66 5788888988888878888886444333337999999999
Q ss_pred HHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 645 AMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 645 AMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
|||||+|||+|+.||..|+|.++.+|++++++...+..+|++|.++..||+.+.+|+++|+++++++|+|+++.+++.++
T Consensus 385 AMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~ 464 (495)
T KOG0853|consen 385 AMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASV 464 (495)
T ss_pred HHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999995543447999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 004760 725 IYKCMK 730 (732)
Q Consensus 725 ~~~~l~ 730 (732)
+.+++.
T Consensus 465 ~~~~~~ 470 (495)
T KOG0853|consen 465 LGKYLQ 470 (495)
T ss_pred hHhcCC
Confidence 988765
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=340.18 Aligned_cols=352 Identities=19% Similarity=0.170 Sum_probs=256.1
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCC------------EEEEEEe--C-CC--CCChhHHHhCCcEEEEcCCCch-
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGA------------TVSAVVL--S-KR--GGLMPELARRKIKVLEDRGEPS- 305 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~------------~V~vv~l--~-~~--g~l~~el~~~gI~v~~~~~~~~- 305 (732)
||++|++++..||||+++++||.+|.+.++ .+.|+++ . .. +.+..+|+..||+|........
T Consensus 283 rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l~~~~~~ 362 (694)
T PRK15179 283 PVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVYSDMQAW 362 (694)
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEeccCCcc
Confidence 799999999999999999999999999854 3455543 2 23 3477788899999877643210
Q ss_pred --------------------------------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-----
Q 004760 306 --------------------------------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----- 348 (732)
Q Consensus 306 --------------------------------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r----- 348 (732)
+.++.+||+||+|+.... +...++....+.+.+++.+|...
T Consensus 363 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~--~lg~lAa~~~gvPvIv~t~h~~~~~~~~ 440 (694)
T PRK15179 363 GGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSI--FACALAALLAGVPRIVLSVRTMPPVDRP 440 (694)
T ss_pred CcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHH--HHHHHHHHHcCCCEEEEEeCCCccccch
Confidence 234679999999875442 22344444556664443433210
Q ss_pred hHh---HHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHH
Q 004760 349 REY---FDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREK 425 (732)
Q Consensus 349 ~~~---~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ek 425 (732)
..+ +......+...+..++++.+... ..++. ..++..+ ..+.+||||+|...|.+.+...+
T Consensus 441 ~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~--~~~l~---~~~g~~~-----------~kI~VI~NGVd~~~f~~~~~~~~ 504 (694)
T PRK15179 441 DRYRVEYDIIYSELLKMRGVALSSNSQFA--AHRYA---DWLGVDE-----------RRIPVVYNGLAPLKSVQDDACTA 504 (694)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEeCcHHH--HHHHH---HHcCCCh-----------hHEEEECCCcCHHhcCCCchhhH
Confidence 011 01111222334445555544311 01110 1123322 23589999999988865432111
Q ss_pred hHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccc
Q 004760 426 RNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLL 505 (732)
Q Consensus 426 r~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll 505 (732)
. +..+ ...++++.++|+++||+.+.||++.+|+|+..+.++.|+
T Consensus 505 ~---~~~~--~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~------------------------------- 548 (694)
T PRK15179 505 M---MAQF--DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPK------------------------------- 548 (694)
T ss_pred H---HHhh--ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcC-------------------------------
Confidence 0 0111 123455677899999999999999999999999776654
Q ss_pred cccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCC
Q 004760 506 QMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKS 585 (732)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~ 585 (732)
.+++++|+|+.++.++.++.
T Consensus 549 ------------------------------------------------------~~LvIvG~G~~~~~L~~l~~------ 568 (694)
T PRK15179 549 ------------------------------------------------------VRFIMVGGGPLLESVREFAQ------ 568 (694)
T ss_pred ------------------------------------------------------eEEEEEccCcchHHHHHHHH------
Confidence 36888999887666665553
Q ss_pred CChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhc
Q 004760 586 NKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVE 665 (732)
Q Consensus 586 ~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe 665 (732)
.+++.++|+|+|+++++..+|++||+||+||. .|+||++++||||||+|||+|+.||+.|+|.
T Consensus 569 ---------------~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~ 631 (694)
T PRK15179 569 ---------------RLGMGERILFTGLSRRVGYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQ 631 (694)
T ss_pred ---------------HcCCCCcEEEcCCcchHHHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHcc
Confidence 34888999999999999999999999999998 9999999999999999999999999999999
Q ss_pred cCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 666 HNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 666 ~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++.+|++++++|.+.++|+++|.+++.+......+++++++.++++|+|+.+++++.++|+
T Consensus 632 dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 632 EGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred CCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999998887557899999998887766678889999999989999999999999985
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=298.29 Aligned_cols=345 Identities=25% Similarity=0.385 Sum_probs=267.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch------------hhhhcC
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS------------FKTSMK 311 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~------------~~~~~k 311 (732)
||++|++.++.||++..+.+|+++|.+.|++|.+++....+.+.+.+...+++++....... +.+..+
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLR 80 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhC
Confidence 69999999999999999999999999999999999977777777777778998876654322 223679
Q ss_pred ccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH---hH----HHh-hhhhccccEEEEecHHhHHHhhhHHHhh
Q 004760 312 ADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---YF----DRA-KLVLDRVKLLVFLSESQTKQWLTWCEEE 383 (732)
Q Consensus 312 ~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~---~~----~~~-~~~l~r~~~li~vS~~~~~~~~~~~~~e 383 (732)
||+||++.... .....+.....+...++|.+|..... +. ... .......+.++++|+..... .
T Consensus 81 ~div~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~----~--- 151 (365)
T cd03807 81 PDVVHTWMYHA--DLYGGLAARLAGVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEY----H--- 151 (365)
T ss_pred CCEEEeccccc--cHHHHHHHHhcCCCcEEEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHH----H---
Confidence 99999875432 22222323332456688877654322 11 111 12223366667887775332 2
Q ss_pred hhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHH
Q 004760 384 KLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVE 463 (732)
Q Consensus 384 ~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLe 463 (732)
...+... + .+.++|||+|...+.+.... ...+|+.++++++.+.++++|++.+.||++.+++
T Consensus 152 -~~~~~~~-------~----~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~ 213 (365)
T cd03807 152 -QAIGYPP-------K----KIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLR 213 (365)
T ss_pred -HHcCCCh-------h----heeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHH
Confidence 1122222 1 34789999999887665431 2456788999988999999999999999999999
Q ss_pred HHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCccc
Q 004760 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (732)
Q Consensus 464 A~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~ 543 (732)
|+..+.++.++
T Consensus 214 a~~~l~~~~~~--------------------------------------------------------------------- 224 (365)
T cd03807 214 AAALLLKKFPN--------------------------------------------------------------------- 224 (365)
T ss_pred HHHHHHHhCCC---------------------------------------------------------------------
Confidence 99999776554
Q ss_pred ccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHH
Q 004760 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA 623 (732)
Q Consensus 544 ~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysa 623 (732)
.+++++|.|+....++.... +..++.++|.|+|..+++..+|+.
T Consensus 225 ----------------~~l~i~G~~~~~~~~~~~~~--------------------~~~~~~~~v~~~g~~~~~~~~~~~ 268 (365)
T cd03807 225 ----------------ARLLLVGDGPDRANLELLAL--------------------KELGLEDKVILLGERSDVPALLNA 268 (365)
T ss_pred ----------------eEEEEecCCcchhHHHHHHH--------------------HhcCCCceEEEccccccHHHHHHh
Confidence 35677777765444433331 234788899999999999999999
Q ss_pred cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 624 ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAME 703 (732)
Q Consensus 624 ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~ 703 (732)
||++++||. .|++|++++|||+||+|||+++.++..|++.+ +|++++++|. ++++++|..++++++.+.+++++
T Consensus 269 adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~--~~l~~~i~~l~~~~~~~~~~~~~ 342 (365)
T cd03807 269 LDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDP--EALAEAIEALLADPALRQALGEA 342 (365)
T ss_pred CCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCH--HHHHHHHHHHHhChHHHHHHHHH
Confidence 999999998 79999999999999999999999999999987 8999998887 99999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Q 004760 704 GRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 704 ~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++.++++|+|++++++|.++|+
T Consensus 343 ~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 343 ARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=305.93 Aligned_cols=343 Identities=20% Similarity=0.281 Sum_probs=254.5
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc---------------h---
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP---------------S--- 305 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~---------------~--- 305 (732)
||+++++. ..||+++++.+||++|.+.||+|.+++........ ....++.+...+... .
T Consensus 2 ki~~~~~p-~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (371)
T cd04962 2 KIGIVCYP-TYGGSGVVATELGKALARRGHEVHFITSSRPFRLD--EYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAE 78 (371)
T ss_pred ceeEEEEe-CCCCccchHHHHHHHHHhcCCceEEEecCCCcchh--hhccCeEEEEecccccchhhcchhHHHHHHHHHH
Confidence 78888764 57999999999999999999999999854322111 122344432111110 0
Q ss_pred hhhhcCccEEEeCCchhhHHHHHHHHhhcCC--CccEEEEEeech-------hHhHHHhhhhhccccEEEEecHHhHHHh
Q 004760 306 FKTSMKADLVIAGSAVCATWIDQYITRFPAG--GSQVVWWIMENR-------REYFDRAKLVLDRVKLLVFLSESQTKQW 376 (732)
Q Consensus 306 ~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~--~~~ivw~i~e~r-------~~~~~~~~~~l~r~~~li~vS~~~~~~~ 376 (732)
+....+||+||+|...... +..++.....+ ..++++.+|... ..+....+..+.+++.++++|+.....
T Consensus 79 ~i~~~~~divh~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~- 156 (371)
T cd04962 79 VAKRYKLDLLHVHYAVPHA-VAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQE- 156 (371)
T ss_pred HHhcCCccEEeecccCCcc-HHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcCHHHHHH-
Confidence 2236799999998654322 22223322221 334666666321 111112233455688899999886432
Q ss_pred hhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCC
Q 004760 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456 (732)
Q Consensus 377 ~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~K 456 (732)
. .+. ... ...+.+||||+|...|.+... ...+++++++++.++++++|++.+.|
T Consensus 157 ---~----~~~-~~~----------~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K 210 (371)
T cd04962 157 ---T----YEL-FDI----------TKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVK 210 (371)
T ss_pred ---H----HHh-cCC----------cCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEeccccccc
Confidence 2 111 111 123589999999887765432 34567889988999999999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccC
Q 004760 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (732)
Q Consensus 457 G~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~ 536 (732)
|++.+++|+..+.++.+
T Consensus 211 ~~~~li~a~~~l~~~~~--------------------------------------------------------------- 227 (371)
T cd04962 211 RIDDVIRIFAKVRKEVP--------------------------------------------------------------- 227 (371)
T ss_pred CHHHHHHHHHHHHhcCC---------------------------------------------------------------
Confidence 99999999998865422
Q ss_pred CCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhh
Q 004760 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR 616 (732)
Q Consensus 537 ~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~d 616 (732)
.+++++|.|+....++.++ +.+++.++|.|+|++++
T Consensus 228 -----------------------~~l~i~G~g~~~~~~~~~~---------------------~~~~~~~~v~~~g~~~~ 263 (371)
T cd04962 228 -----------------------ARLLLVGDGPERSPAERLA---------------------RELGLQDDVLFLGKQDH 263 (371)
T ss_pred -----------------------ceEEEEcCCcCHHHHHHHH---------------------HHcCCCceEEEecCccc
Confidence 2567788886655554444 23377789999999999
Q ss_pred HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHH
Q 004760 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSV 696 (732)
Q Consensus 617 v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~ 696 (732)
+.++|+.||++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|. +++++++..+++|++.
T Consensus 264 ~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~--~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 264 VEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDV--EAMAEYALSLLEDDEL 339 (371)
T ss_pred HHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCH--HHHHHHHHHHHhCHHH
Confidence 9999999999999998 99999999999999999999999999999999999999999887 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 697 RERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 697 r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+++|++++++.+.+.|+|+.+++++.++|+++
T Consensus 340 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 340 WQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999999999888999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=310.63 Aligned_cols=354 Identities=18% Similarity=0.180 Sum_probs=242.1
Q ss_pred CCCcHHHHHHHHHHHHHHCCC--EEEEEEeCCCC-----CChhHHH--hCCcEEEEcCCCch------------------
Q 004760 253 SMTGAPLSMMELATELLSCGA--TVSAVVLSKRG-----GLMPELA--RRKIKVLEDRGEPS------------------ 305 (732)
Q Consensus 253 s~gGA~~~~~eLA~~L~~~G~--~V~vv~l~~~g-----~l~~el~--~~gI~v~~~~~~~~------------------ 305 (732)
..||++.++.+||++|.+.|| +|.|++....+ ++..... ..|++++..+....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELADN 103 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHHHH
Confidence 358999999999999999997 99999953222 1211222 46888877654210
Q ss_pred h---hhh--cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh----Hh----------------HH---Hhhh
Q 004760 306 F---KTS--MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR----EY----------------FD---RAKL 357 (732)
Q Consensus 306 ~---~~~--~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~----~~----------------~~---~~~~ 357 (732)
+ .++ .+||+||+|+.. +.++. .+.....+.+ ++..+|.... .+ .. ..+.
T Consensus 104 l~~~~~~~~~~~DvIH~h~~~-~~~~~-~~~~~~~~~p-~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (439)
T TIGR02472 104 LLQHLRQQGHLPDLIHAHYAD-AGYVG-ARLSRLLGVP-LIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEE 180 (439)
T ss_pred HHHHHHHcCCCCCEEEEcchh-HHHHH-HHHHHHhCCC-EEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHH
Confidence 1 112 379999999743 23332 2223334444 4555552110 00 00 0112
Q ss_pred hhccccEEEEecHHhHHHhhhHHHhhhhhc-cCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHH
Q 004760 358 VLDRVKLLVFLSESQTKQWLTWCEEEKLKL-RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKE 436 (732)
Q Consensus 358 ~l~r~~~li~vS~~~~~~~~~~~~~e~i~l-~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~ 436 (732)
.+.+.+.++++|...... .+ ... +..+ + .+.+||||+|++.|.+....+.....+..+ ++
T Consensus 181 ~~~~ad~ii~~s~~~~~~---~~----~~~~~~~~-------~----ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~-~~ 241 (439)
T TIGR02472 181 TLAHASLVITSTHQEIEE---QY----ALYDSYQP-------E----RMQVIPPGVDLSRFYPPQSSEETSEIDNLL-AP 241 (439)
T ss_pred HHHhCCEEEECCHHHHHH---HH----HhccCCCc-------c----ceEEECCCcChhhcCCCCccccchhHHHHH-Hh
Confidence 344577777776543110 01 111 2222 2 358999999999987643221111122222 33
Q ss_pred hCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccc
Q 004760 437 MGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSN 516 (732)
Q Consensus 437 lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~ 516 (732)
++..+++++|+++||+.+.||++.||+|++.+......
T Consensus 242 ~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~------------------------------------------ 279 (439)
T TIGR02472 242 FLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEM------------------------------------------ 279 (439)
T ss_pred hccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhh------------------------------------------
Confidence 55666778999999999999999999999865321110
Q ss_pred ccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHH
Q 004760 517 ELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILE 596 (732)
Q Consensus 517 ~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~ 596 (732)
. .-++++|+|++...++.... .+.+++..
T Consensus 280 -----------------------------------------~-~l~li~G~g~~~~~l~~~~~---------~~~~~~~~ 308 (439)
T TIGR02472 280 -----------------------------------------A-NLVLVLGCRDDIRKMESQQR---------EVLQKVLL 308 (439)
T ss_pred -----------------------------------------c-cEEEEeCCccccccccHHHH---------HHHHHHHH
Confidence 0 01235677765444332211 12233333
Q ss_pred HHHhcCCCCCcEEEccc--hhhHHHHHHHc----CEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceE
Q 004760 597 FLSQHSNLSKAMLWTPA--TTRVASLYSAA----DVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTG 670 (732)
Q Consensus 597 ~l~~~l~l~~~V~f~G~--~~dv~~lysaA----Dv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~G 670 (732)
+...+++.++|+|+|+ .++++.+|++| |+||+||. .|+||++++||||||+|||+|+.||+.|+|.++.+|
T Consensus 309 -~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G 385 (439)
T TIGR02472 309 -LIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNG 385 (439)
T ss_pred -HHHHcCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcE
Confidence 3355689999999996 47899999987 99999998 999999999999999999999999999999999999
Q ss_pred EEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 671 LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 671 ll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++++++|+ ++|+++|.++++|++.+++|++++++.+.++|+|+.++++|.++++
T Consensus 386 ~lv~~~d~--~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 386 LLVDVLDL--EAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred EEeCCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999998 9999999999999999999999999999999999999999999874
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=305.74 Aligned_cols=341 Identities=16% Similarity=0.193 Sum_probs=249.3
Q ss_pred eEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch----------------
Q 004760 244 KFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------- 305 (732)
Q Consensus 244 kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------- 305 (732)
||++|++.. ..||+++.+.+||++|.+.||+|.|++.........+....|++++..+....
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l 80 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLL 80 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHH
Confidence 678887755 46999999999999999999999999954333333334456777765543210
Q ss_pred --hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-----hH-hHHH-hhhhhccccEEEEecHHhHHHh
Q 004760 306 --FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-----RE-YFDR-AKLVLDRVKLLVFLSESQTKQW 376 (732)
Q Consensus 306 --~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r-----~~-~~~~-~~~~l~r~~~li~vS~~~~~~~ 376 (732)
+..+.+||+||+++..........+.....+.+ +++..|... .. +... ......+.+.++++|......
T Consensus 81 ~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~-~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~- 158 (398)
T cd03796 81 RNILIRERITIVHGHQAFSALAHEALLHARTMGLK-TVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKEN- 158 (398)
T ss_pred HHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCc-EEEEecccccccchhhHHhhHHHHHhhccCCEEEEecHhHhhH-
Confidence 222679999999975433222223333333433 666665321 00 1111 122345588899999885321
Q ss_pred hhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCC
Q 004760 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456 (732)
Q Consensus 377 ~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~K 456 (732)
.. ...+..+ ..+.+||||+|...|.+.... .+++.++++++|++.+.|
T Consensus 159 --~~----~~~~~~~-----------~k~~vi~ngvd~~~f~~~~~~---------------~~~~~~~i~~~grl~~~K 206 (398)
T cd03796 159 --TV----LRASLDP-----------ERVSVIPNAVDSSDFTPDPSK---------------RDNDKITIVVISRLVYRK 206 (398)
T ss_pred --HH----HHhCCCh-----------hhEEEEcCccCHHHcCCCccc---------------CCCCceEEEEEeccchhc
Confidence 11 1112222 234899999999888654320 235678999999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccC
Q 004760 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (732)
Q Consensus 457 G~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~ 536 (732)
|++.+++|++.+.++.++
T Consensus 207 g~~~li~a~~~l~~~~~~-------------------------------------------------------------- 224 (398)
T cd03796 207 GIDLLVGIIPEICKKHPN-------------------------------------------------------------- 224 (398)
T ss_pred CHHHHHHHHHHHHhhCCC--------------------------------------------------------------
Confidence 999999999988766554
Q ss_pred CCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--
Q 004760 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT-- 614 (732)
Q Consensus 537 ~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~-- 614 (732)
.+++++|+|+..+.++.++ +.+++.++|.|+|..
T Consensus 225 -----------------------~~l~i~G~g~~~~~l~~~~---------------------~~~~l~~~v~~~G~~~~ 260 (398)
T cd03796 225 -----------------------VRFIIGGDGPKRILLEEMR---------------------EKYNLQDRVELLGAVPH 260 (398)
T ss_pred -----------------------EEEEEEeCCchHHHHHHHH---------------------HHhCCCCeEEEeCCCCH
Confidence 3678889887655555444 333788899999975
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~ 694 (732)
+++..+|++||++|+||. .|+||++++||||||+|||+|+.||..|++.++. +++.+ +|. ++|+++|.++++++
T Consensus 261 ~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~--~~l~~~l~~~l~~~ 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDV--ESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCH--HHHHHHHHHHHhCh
Confidence 789999999999999997 8999999999999999999999999999998763 44444 465 99999999999987
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 695 SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 695 ~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
.....+.+++++.++++|||++++++++++|++++.
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 777778899999999999999999999999999875
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=292.10 Aligned_cols=338 Identities=23% Similarity=0.316 Sum_probs=251.8
Q ss_pred EEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch--------------hhhhcCc
Q 004760 247 LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS--------------FKTSMKA 312 (732)
Q Consensus 247 lI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~--------------~~~~~k~ 312 (732)
.|..+++.||+++.+++||++|.+.||+|.+++. .+.....+...|++++....... +....+|
T Consensus 2 ~~~~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (355)
T cd03819 2 QVLPALESGGVERGTLELARALVERGHRSLVASA--GGRLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKV 79 (355)
T ss_pred ccchhhccCcHHHHHHHHHHHHHHcCCEEEEEcC--CCchHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCC
Confidence 4567889999999999999999999999999873 45566677778888776543221 2236799
Q ss_pred cEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCc
Q 004760 313 DLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPA 392 (732)
Q Consensus 313 DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~ 392 (732)
|+||+++.... |.. ++.....+ .++++.+|....... .....+.+.+.++++|+..... +. ...+...
T Consensus 80 dii~~~~~~~~-~~~-~~~~~~~~-~~~i~~~h~~~~~~~-~~~~~~~~~~~vi~~s~~~~~~----~~---~~~~~~~- 147 (355)
T cd03819 80 DIVHARSRAPA-WSA-YLAARRTR-PPFVTTVHGFYSVNF-RYNAIMARGDRVIAVSNFIADH----IR---ENYGVDP- 147 (355)
T ss_pred CEEEECCCchh-HHH-HHHHHhcC-CCEEEEeCCchhhHH-HHHHHHHhcCEEEEeCHHHHHH----HH---HhcCCCh-
Confidence 99999875432 222 22222233 346666754322111 2234455688899999886442 21 0122211
Q ss_pred cccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhC
Q 004760 393 VVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQE 472 (732)
Q Consensus 393 ~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~ 472 (732)
..+.+||||+|.+.|.+...... ....+|+.++++++.++++++|++.+.||++.+++++..+.+..
T Consensus 148 ----------~k~~~i~ngi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~ 214 (355)
T cd03819 148 ----------DRIRVIPRGVDLDRFDPGAVPPE---RILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDD 214 (355)
T ss_pred ----------hhEEEecCCccccccCccccchH---HHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhcC
Confidence 23589999999998865432111 11337888898889999999999999999999999999997664
Q ss_pred CCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccc
Q 004760 473 PSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVS 552 (732)
Q Consensus 473 p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~ 552 (732)
++
T Consensus 215 ~~------------------------------------------------------------------------------ 216 (355)
T cd03819 215 PD------------------------------------------------------------------------------ 216 (355)
T ss_pred CC------------------------------------------------------------------------------
Confidence 43
Q ss_pred cCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEcc-
Q 004760 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINS- 631 (732)
Q Consensus 553 iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS- 631 (732)
.+++++|.|+..+.+. +.+.+ ..+.+++.++|.|+|+.+++..+|++||++++||
T Consensus 217 -------~~l~ivG~~~~~~~~~----------------~~~~~-~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~ 272 (355)
T cd03819 217 -------VHLLIVGDAQGRRFYY----------------AELLE-LIKRLGLQDRVTFVGHCSDMPAAYALADIVVSAST 272 (355)
T ss_pred -------eEEEEEECCcccchHH----------------HHHHH-HHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCC
Confidence 2566777775433222 22222 2334477889999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Q 004760 632 QGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYL-LKNPSVRERMAMEGRKKVER 710 (732)
Q Consensus 632 ~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~L-L~n~~~r~~m~~~~r~~v~~ 710 (732)
. .|+||++++||||||+|||+++.||..|++.++.+|++++++|. ++++++|..+ ..+++.+++|++++++.+++
T Consensus 273 ~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~--~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 273 E--PEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDA--EALAQALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred C--CCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCH--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 5 89999999999999999999999999999999999999998888 9999999654 45899999999999999999
Q ss_pred hcCHHHH
Q 004760 711 MYLKKHM 717 (732)
Q Consensus 711 ~ys~~~~ 717 (732)
+|+++.|
T Consensus 349 ~f~~~~~ 355 (355)
T cd03819 349 LFSYDRM 355 (355)
T ss_pred hhhhccC
Confidence 9999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=301.43 Aligned_cols=344 Identities=19% Similarity=0.242 Sum_probs=246.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH-HHhCCcEEEEcCCCc--------------h-----h---hh--
Q 004760 254 MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-LARRKIKVLEDRGEP--------------S-----F---KT-- 308 (732)
Q Consensus 254 ~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e-l~~~gI~v~~~~~~~--------------~-----~---~~-- 308 (732)
.||++.++.+||++|.++||+|++++.......... -...|++++..+... . + ..
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE 98 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 599999999999999999999999996432211111 113578877553110 0 1 11
Q ss_pred hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh---Hh----------HHH--hhhhhccccEEEEecHHhH
Q 004760 309 SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR---EY----------FDR--AKLVLDRVKLLVFLSESQT 373 (732)
Q Consensus 309 ~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~---~~----------~~~--~~~~l~r~~~li~vS~~~~ 373 (732)
..+||+||+|+... .++. ++.....+.+ +++.+|.... .+ ... ....+..++.++++|+...
T Consensus 99 ~~~~Diih~h~~~~-~~~~-~~~~~~~~~p-~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~ 175 (405)
T TIGR03449 99 PGYYDLIHSHYWLS-GQVG-WLLRDRWGVP-LVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEA 175 (405)
T ss_pred CCCCCeEEechHHH-HHHH-HHHHHhcCCC-EEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHH
Confidence 24799999986332 2222 2222233444 5555543210 00 000 1123455788999988754
Q ss_pred HHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC
Q 004760 374 KQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (732)
Q Consensus 374 ~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~ 453 (732)
+. +. ...+..+ ..+.+||||+|.+.|.+.+. ...+.+++++.++++|+++|++.
T Consensus 176 ~~----~~---~~~~~~~-----------~ki~vi~ngvd~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~l~ 229 (405)
T TIGR03449 176 RD----LV---RHYDADP-----------DRIDVVAPGADLERFRPGDR--------ATERARLGLPLDTKVVAFVGRIQ 229 (405)
T ss_pred HH----HH---HHcCCCh-----------hhEEEECCCcCHHHcCCCcH--------HHHHHhcCCCCCCcEEEEecCCC
Confidence 32 10 1112211 23589999999988865432 34577899988889999999999
Q ss_pred CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccc
Q 004760 454 PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533 (732)
Q Consensus 454 ~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 533 (732)
+.||++.+++|++.+.++.++.
T Consensus 230 ~~K~~~~li~a~~~l~~~~~~~---------------------------------------------------------- 251 (405)
T TIGR03449 230 PLKAPDVLLRAVAELLDRDPDR---------------------------------------------------------- 251 (405)
T ss_pred cccCHHHHHHHHHHHHhhCCCc----------------------------------------------------------
Confidence 9999999999999997765540
Q ss_pred ccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc
Q 004760 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA 613 (732)
Q Consensus 534 ~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~ 613 (732)
..+++++|.+.... .++.+++ +.+.+.+++.++|.|+|+
T Consensus 252 -------------------------~~~l~ivG~~~~~g---------------~~~~~~l-~~~~~~~~l~~~v~~~g~ 290 (405)
T TIGR03449 252 -------------------------NLRVIVVGGPSGSG---------------LATPDAL-IELAAELGIADRVRFLPP 290 (405)
T ss_pred -------------------------ceEEEEEeCCCCCc---------------chHHHHH-HHHHHHcCCCceEEECCC
Confidence 12456666421100 0111122 222234488889999997
Q ss_pred h--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh
Q 004760 614 T--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL 691 (732)
Q Consensus 614 ~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL 691 (732)
. +++.++|+.||++|+||. .|+||++++|||++|+|||+++.||..|++.++.+|++++++|. ++|+++|.+++
T Consensus 291 ~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~--~~la~~i~~~l 366 (405)
T TIGR03449 291 RPPEELVHVYRAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDP--ADWADALARLL 366 (405)
T ss_pred CCHHHHHHHHHhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCH--HHHHHHHHHHH
Confidence 5 789999999999999998 99999999999999999999999999999999999999998888 99999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 692 KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 692 ~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++++.+++|+.++++.++ +|+|+.+++++.++|.+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~-~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 367 DDPRTRIRMGAAAVEHAA-GFSWAATADGLLSSYRDALA 404 (405)
T ss_pred hCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999875 69999999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=301.94 Aligned_cols=347 Identities=18% Similarity=0.248 Sum_probs=246.2
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCC-ChhHHHhCCcEEEEcCCC--ch--------------
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPELARRKIKVLEDRGE--PS-------------- 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~-l~~el~~~gI~v~~~~~~--~~-------------- 305 (732)
+||+++.++++.||+++++.+||++|.++||+|++++...... ...+....++++...+.. ..
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRM 80 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHHHHH
Confidence 4899999999999999999999999999999999999533221 223333333555432210 00
Q ss_pred --------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh------Hh----HHH----h-hhhhccc
Q 004760 306 --------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------EY----FDR----A-KLVLDRV 362 (732)
Q Consensus 306 --------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~------~~----~~~----~-~~~l~r~ 362 (732)
+....++|+||+++.....+ ++ ..... .++++++|.... .+ +.. . +..+..+
T Consensus 81 ~~~~~~~~~~~~~~~Dvi~~~~~~~~~~---~~-~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 155 (392)
T cd03805 81 LYLALYLLLLPDEKYDVFIVDQVSACVP---LL-KLFSP-SKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMA 155 (392)
T ss_pred HHHHHHHHhcccCCCCEEEEcCcchHHH---HH-HHhcC-CcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCc
Confidence 12356999999886433222 11 22222 456666653211 11 110 0 1223447
Q ss_pred cEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCC
Q 004760 363 KLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQ 442 (732)
Q Consensus 363 ~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~ 442 (732)
+.+++.|+...+. +... ++..+ ...+.+||||+|.+.|.+.... ..++......+
T Consensus 156 d~ii~~s~~~~~~----~~~~---~~~~~----------~~~~~vi~n~vd~~~~~~~~~~--------~~~~~~~~~~~ 210 (392)
T cd03805 156 DKIVVNSNFTASV----FKKT---FPSLA----------KNPREVVYPCVDTDSFESTSED--------PDPGLLIPKSG 210 (392)
T ss_pred eEEEEcChhHHHH----HHHH---hcccc----------cCCcceeCCCcCHHHcCccccc--------ccccccccCCC
Confidence 8889998886442 2110 11111 0112589999999888664321 12233455677
Q ss_pred CEEEEEEecCCCCCCHHHHHHHHHHhHHhC---CCCchhhhhhccccccccccccccccccccccccccccccCcccccc
Q 004760 443 DMLVLSLSSINPGKGQLLLVESAQLMIEQE---PSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELS 519 (732)
Q Consensus 443 ~~lil~vGri~~~KG~d~LLeA~~~l~~~~---p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~ 519 (732)
.++|+++|++.+.||++.+++|+..+.++. ++
T Consensus 211 ~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~--------------------------------------------- 245 (392)
T cd03805 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN--------------------------------------------- 245 (392)
T ss_pred ceEEEEEeeecccCChHHHHHHHHHHHhhcccccC---------------------------------------------
Confidence 889999999999999999999999997665 32
Q ss_pred cchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHH
Q 004760 520 VSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLS 599 (732)
Q Consensus 520 ~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~ 599 (732)
.+++++|+|+.+. ..+..|..++.+.+.
T Consensus 246 ----------------------------------------~~l~i~G~~~~~~------------~~~~~~~~~l~~~~~ 273 (392)
T cd03805 246 ----------------------------------------VRLVIAGGYDPRV------------AENVEYLEELQRLAE 273 (392)
T ss_pred ----------------------------------------eEEEEEcCCCCCC------------chhHHHHHHHHHHHH
Confidence 3567777765321 111234444444444
Q ss_pred hcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCC
Q 004760 600 QHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 600 ~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d 677 (732)
+.+++.++|.|+|++ +++..+|++||++++||. .|+||++++||||||+|||+|+.||..|++.++.+|+++++ |
T Consensus 274 ~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~ 350 (392)
T cd03805 274 ELLLLEDQVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-T 350 (392)
T ss_pred HhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-C
Confidence 425888999999987 567899999999999998 99999999999999999999999999999999999999875 6
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKL 721 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~ 721 (732)
+ ++++++|..++++++.+++|++++++.++++|+|+.+++++
T Consensus 351 ~--~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 351 P--EEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred H--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 6 99999999999999999999999999999999999998864
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=301.33 Aligned_cols=350 Identities=17% Similarity=0.164 Sum_probs=257.4
Q ss_pred CeEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCC-----------hhHHHhCCcEEEEcCCCc-----
Q 004760 243 RKFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGL-----------MPELARRKIKVLEDRGEP----- 304 (732)
Q Consensus 243 ~kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l-----------~~el~~~gI~v~~~~~~~----- 304 (732)
.||++|++.. ..+|++..+.+||++|.+.||+|+|++.....+. ..+....|++++..+...
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 3789998765 3589999999999999999999999995432111 011124688887654321
Q ss_pred h-----------------hhh--hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-----------hHhHHH
Q 004760 305 S-----------------FKT--SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-----------REYFDR 354 (732)
Q Consensus 305 ~-----------------~~~--~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r-----------~~~~~~ 354 (732)
. +.+ ..+||+||+++..........+.....+.+ +++.++... ...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~-~v~~~~d~~~~~~~~~~~~~~~~~~~ 159 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGAR-TWLHIQDYEVDAAFGLGLLKGGKVAR 159 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCC-EEEEeccCCHHHHHHhCCccCcHHHH
Confidence 0 111 268999999864332222233333444444 444443211 111111
Q ss_pred -----hhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHh
Q 004760 355 -----AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLL 429 (732)
Q Consensus 355 -----~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~ 429 (732)
.+..+..++.++++|+...+. + ...+..+ ..+.+||||+|.+.|.+.... .
T Consensus 160 ~~~~~~~~~~~~ad~ii~~S~~~~~~----~----~~~~~~~-----------~~i~vi~ngvd~~~~~~~~~~-----~ 215 (412)
T PRK10307 160 LATAFERSLLRRFDNVSTISRSMMNK----A----REKGVAA-----------EKVIFFPNWSEVARFQPVADA-----D 215 (412)
T ss_pred HHHHHHHHHHhhCCEEEecCHHHHHH----H----HHcCCCc-----------ccEEEECCCcCHhhcCCCCcc-----c
Confidence 122344588999999986442 2 1122221 235899999999988764321 1
Q ss_pred HHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccc
Q 004760 430 RDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSD 509 (732)
Q Consensus 430 r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~ 509 (732)
+..+|+.++++++.++|+++|++.+.||++.|++|++.+. +.++
T Consensus 216 ~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~-~~~~----------------------------------- 259 (412)
T PRK10307 216 VDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLR-DRPD----------------------------------- 259 (412)
T ss_pred hHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhc-cCCC-----------------------------------
Confidence 2457888999988899999999999999999999998773 2232
Q ss_pred cccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChh
Q 004760 510 DVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVP 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~ 589 (732)
.+++++|+|+..+.++.++.
T Consensus 260 --------------------------------------------------~~l~ivG~g~~~~~l~~~~~---------- 279 (412)
T PRK10307 260 --------------------------------------------------LIFVICGQGGGKARLEKMAQ---------- 279 (412)
T ss_pred --------------------------------------------------eEEEEECCChhHHHHHHHHH----------
Confidence 36888999987666665553
Q ss_pred hHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCC----CcHHHHHHHHcCCCEEEcCCCC--hh
Q 004760 590 YVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGET----FGRVTIEAMAFGVPVLGTDAGG--TK 661 (732)
Q Consensus 590 y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Eg----fg~vilEAMA~GlPVI~td~gG--~~ 661 (732)
.++++ +|.|+|++ +++.++|++||++|+||. .|+ +|.+++||||||+|||+|+.+| ..
T Consensus 280 -----------~~~l~-~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~ 345 (412)
T PRK10307 280 -----------CRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGTELG 345 (412)
T ss_pred -----------HcCCC-ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCchHH
Confidence 23665 79999975 689999999999999998 787 6888999999999999999876 56
Q ss_pred hhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 662 EIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 662 EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
|+++ .+|++++++|+ ++|+++|.++++|++.+++|++++++.++++|+|+.++++|.++|++++..
T Consensus 346 ~~i~--~~G~~~~~~d~--~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 346 QLVE--GIGVCVEPESV--EALVAAIAALARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHh--CCcEEeCCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 8887 58999999988 999999999999999999999999999999999999999999999998764
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=305.10 Aligned_cols=341 Identities=21% Similarity=0.263 Sum_probs=248.5
Q ss_pred ccCCeEEEEeCCC---CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCC-------------
Q 004760 240 VWSRKFILIFHEL---SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGE------------- 303 (732)
Q Consensus 240 ~~~~kIllI~h~l---s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~------------- 303 (732)
.++.||+++++.. ..||.+..+.+|+++|.+.||+|.+++..... ..+ ..++.++.....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~--~~~--~~g~~v~~~~~~~~~~~~~~~~~~~ 131 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV--PQE--FHGAKVIGSWSFPCPFYQKVPLSLA 131 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC--Ccc--ccCceeeccCCcCCccCCCceeecc
Confidence 6779999998754 46999999999999999999999999954322 111 134444321110
Q ss_pred --ch---hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHH-------------HhhhhhccccEE
Q 004760 304 --PS---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFD-------------RAKLVLDRVKLL 365 (732)
Q Consensus 304 --~~---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~-------------~~~~~l~r~~~l 365 (732)
.. +.+..+||+||+++.....+.. ++.....+.+ ++...|.....+.. ..+......+.+
T Consensus 132 ~~~~l~~~i~~~kpDiIh~~~~~~~~~~~-~~~ak~~~ip-~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 132 LSPRIISEVARFKPDLIHASSPGIMVFGA-LFYAKLLCVP-LVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLT 209 (465)
T ss_pred CCHHHHHHHHhCCCCEEEECCCchhHHHH-HHHHHHhCCC-EEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEE
Confidence 01 2336899999998753333322 2222334445 33334322111110 011223347888
Q ss_pred EEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhC-CCCCCE
Q 004760 366 VFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG-LTDQDM 444 (732)
Q Consensus 366 i~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lg-l~~~~~ 444 (732)
+++|+..... . ...+..+ ...+.+||||+|...|.+.... ..++..+. ..++++
T Consensus 210 i~~S~~~~~~----l----~~~~~~~----------~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~ 264 (465)
T PLN02871 210 LVTSPALGKE----L----EAAGVTA----------ANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKP 264 (465)
T ss_pred EECCHHHHHH----H----HHcCCCC----------cCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCe
Confidence 9998876432 2 1122111 1235899999999988764321 22344443 334678
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhh
Q 004760 445 LVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSES 524 (732)
Q Consensus 445 lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~ 524 (732)
+|+++|++.+.||++.++++++.+ ++
T Consensus 265 ~i~~vGrl~~~K~~~~li~a~~~~----~~-------------------------------------------------- 290 (465)
T PLN02871 265 LIVYVGRLGAEKNLDFLKRVMERL----PG-------------------------------------------------- 290 (465)
T ss_pred EEEEeCCCchhhhHHHHHHHHHhC----CC--------------------------------------------------
Confidence 899999999999999999988754 33
Q ss_pred hhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCC
Q 004760 525 FTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNL 604 (732)
Q Consensus 525 ~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l 604 (732)
.+++++|+|+..+.++.++. +
T Consensus 291 -----------------------------------~~l~ivG~G~~~~~l~~~~~-----------------------~- 311 (465)
T PLN02871 291 -----------------------------------ARLAFVGDGPYREELEKMFA-----------------------G- 311 (465)
T ss_pred -----------------------------------cEEEEEeCChHHHHHHHHhc-----------------------c-
Confidence 25788999987777666552 1
Q ss_pred CCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc---CceEEEECCCCCc
Q 004760 605 SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH---NVTGLLHPPGHPG 679 (732)
Q Consensus 605 ~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~---g~~Gll~~~~d~~ 679 (732)
.+|.|+|++ +++..+|++||++|+||. .|+||++++||||||+|||+++.||+.|++++ +.+|++++++|+
T Consensus 312 -~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~- 387 (465)
T PLN02871 312 -TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDV- 387 (465)
T ss_pred -CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCH-
Confidence 369999987 789999999999999998 99999999999999999999999999999998 899999999988
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHhhc
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ-VIYKCMK 730 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e-v~~~~l~ 730 (732)
++|+++|..+++|++.+++|++++++.++ .|+|+.+++++++ +|+++++
T Consensus 388 -~~la~~i~~ll~~~~~~~~~~~~a~~~~~-~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 388 -DDCVEKLETLLADPELRERMGAAAREEVE-KWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999886 6999999999998 6887764
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=285.89 Aligned_cols=342 Identities=20% Similarity=0.283 Sum_probs=245.5
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch-------------hhhhc
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS-------------FKTSM 310 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~-------------~~~~~ 310 (732)
+|+++++.++.||++..+.+|+++|.+.||+|.+++...... ..... ....+........ +.+..
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESE-VKPPI-DATIILNLNMSKNPLSFLLALWKLRKILRQF 78 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCC-ccchh-hccceEEecccccchhhHHHHHHHHHHHHhc
Confidence 589999999999999999999999999999999999654332 22222 2222211111110 23367
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH--hHHHhhhhhc-cccEEEEecHHhHHHhhhHHHhhhhhc
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE--YFDRAKLVLD-RVKLLVFLSESQTKQWLTWCEEEKLKL 387 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~--~~~~~~~~l~-r~~~li~vS~~~~~~~~~~~~~e~i~l 387 (732)
+||+||+++..+. .+..++... ...+.++...|..... .......... ..+..+.+|...... + +..
T Consensus 79 ~pdiv~~~~~~~~-~~~~l~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~----~~~ 148 (360)
T cd04951 79 KPDVVHAHMFHAN-IFARLLRLF-LPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDY----F----IAS 148 (360)
T ss_pred CCCEEEEcccchH-HHHHHHHhh-CCCCcEEEEeeccCchhHHHHHHHHHHhhccCceEEEcHHHHHH----H----Hhc
Confidence 9999999875432 222222222 3334455555433211 1011111111 244455666654221 2 111
Q ss_pred cCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHH
Q 004760 388 RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQL 467 (732)
Q Consensus 388 ~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~ 467 (732)
+..+ ...+.+||||+|.+.|.+.... +..+++.+++++++++++++|++.+.||++.+++|+..
T Consensus 149 ~~~~----------~~~~~~i~ng~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~ 212 (360)
T cd04951 149 KAFN----------ANKSFVVYNGIDTDRFRKDPAR------RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAK 212 (360)
T ss_pred cCCC----------cccEEEEccccchhhcCcchHH------HHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHH
Confidence 1111 1134899999999888665431 24678899999889999999999999999999999999
Q ss_pred hHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCC
Q 004760 468 MIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGN 547 (732)
Q Consensus 468 l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~ 547 (732)
+.++.|+
T Consensus 213 l~~~~~~------------------------------------------------------------------------- 219 (360)
T cd04951 213 LLSDYLD------------------------------------------------------------------------- 219 (360)
T ss_pred HHhhCCC-------------------------------------------------------------------------
Confidence 8766554
Q ss_pred CCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEE
Q 004760 548 TDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVY 627 (732)
Q Consensus 548 ~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~ 627 (732)
.+++++|+|+..+.++..+. .+++.++|.|+|+++++..+|+.||++
T Consensus 220 ------------~~l~i~G~g~~~~~~~~~~~---------------------~~~~~~~v~~~g~~~~~~~~~~~ad~~ 266 (360)
T cd04951 220 ------------IKLLIAGDGPLRATLERLIK---------------------ALGLSNRVKLLGLRDDIAAYYNAADLF 266 (360)
T ss_pred ------------eEEEEEcCCCcHHHHHHHHH---------------------hcCCCCcEEEecccccHHHHHHhhceE
Confidence 35778888876655554442 237778999999999999999999999
Q ss_pred EEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh-cCHHHHHHHHHHHHH
Q 004760 628 VINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL-KNPSVRERMAMEGRK 706 (732)
Q Consensus 628 V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL-~n~~~r~~m~~~~r~ 706 (732)
++||. .|+||++++|||++|+|||+++.|+..|++++ +|++++++|+ ++++++|..++ .+++.+..++.+ ++
T Consensus 267 v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~--~~~~~~i~~ll~~~~~~~~~~~~~-~~ 339 (360)
T cd04951 267 VLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDP--EALANKIDEILKMSGEERDIIGAR-RE 339 (360)
T ss_pred Eeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCH--HHHHHHHHHHHhCCHHHHHHHHHH-HH
Confidence 99998 89999999999999999999999999999987 7889988887 99999999999 466677777766 88
Q ss_pred HHHHhcCHHHHHHHHHHHHH
Q 004760 707 KVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 707 ~v~~~ys~~~~~~~~~ev~~ 726 (732)
.+.+.|+|+.++++|.++|+
T Consensus 340 ~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 340 RIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHhcCHHHHHHHHHHHhh
Confidence 88889999999999999986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=294.98 Aligned_cols=343 Identities=17% Similarity=0.192 Sum_probs=243.1
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChh---HHH--hCCcEEEEcCCCc--hh-------h--
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP---ELA--RRKIKVLEDRGEP--SF-------K-- 307 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~---el~--~~gI~v~~~~~~~--~~-------~-- 307 (732)
||+++++.+..||++.++++++..|.+.||+|.++++....+... +.. -.|.++ ...... .+ .
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 79 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADI-ELSEEEKEIYLEWNEENAER 79 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCC-CCCHHHHHHHHHHHHHHhcc
Confidence 699999999999999999999999999999999998655433211 111 124343 111111 01 1
Q ss_pred --hhcCccEEEeCCchhhHHHHHHHHhhcC-CCccEEEEEeechhH----hHHHhhhhhccccEEEEecHHhHHHhhhHH
Q 004760 308 --TSMKADLVIAGSAVCATWIDQYITRFPA-GGSQVVWWIMENRRE----YFDRAKLVLDRVKLLVFLSESQTKQWLTWC 380 (732)
Q Consensus 308 --~~~k~DlVia~Sav~~~~i~~~i~~~~~-~~~~ivw~i~e~r~~----~~~~~~~~l~r~~~li~vS~~~~~~~~~~~ 380 (732)
...+||+||+|+..... + ...... +.+ ++++.|..... .....+..+.+.+.+++.+...
T Consensus 80 ~~~~~~~Dvv~~h~~~~~~-~---~~~~~~~~~~-~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-------- 146 (372)
T cd03792 80 PLLDLDADVVVIHDPQPLA-L---PLFKKKRGRP-WIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLPEY-------- 146 (372)
T ss_pred ccccCCCCEEEECCCCchh-H---HHhhhcCCCe-EEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecHHHh--------
Confidence 14589999999765321 1 111122 334 55566643211 1111233444566666665221
Q ss_pred HhhhhhccCCCccccccCCCccceEEeecCCCCCCCCC--chhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCH
Q 004760 381 EEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSS--PEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQ 458 (732)
Q Consensus 381 ~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~--~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~ 458 (732)
......+ . . .+||||+|..... ..... .+..+|+++|++++.++|+++||+.+.||+
T Consensus 147 ----~~~~~~~--------~---~-~vipngvd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~ 205 (372)
T cd03792 147 ----VPPQVPP--------R---K-VIIPPSIDPLSGKNRELSPA-----DIEYILEKYGIDPERPYITQVSRFDPWKDP 205 (372)
T ss_pred ----cCCCCCC--------c---e-EEeCCCCCCCccccCCCCHH-----HHHHHHHHhCCCCCCcEEEEEeccccccCc
Confidence 1111111 1 1 3899999975321 11111 124678889999899999999999999999
Q ss_pred HHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCC
Q 004760 459 LLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLS 538 (732)
Q Consensus 459 d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~ 538 (732)
+.+++|+..+.++.++
T Consensus 206 ~~ll~a~~~l~~~~~~---------------------------------------------------------------- 221 (372)
T cd03792 206 FGVIDAYRKVKERVPD---------------------------------------------------------------- 221 (372)
T ss_pred HHHHHHHHHHHhhCCC----------------------------------------------------------------
Confidence 9999999998766554
Q ss_pred CCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch----
Q 004760 539 PSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT---- 614 (732)
Q Consensus 539 p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~---- 614 (732)
.+++++|+|+..+. ...+..+.+.+..++.++|.|+|..
T Consensus 222 ---------------------~~l~i~G~g~~~~~----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 264 (372)
T cd03792 222 ---------------------PQLVLVGSGATDDP----------------EGWIVYEEVLEYAEGDPDIHVLTLPPVSD 264 (372)
T ss_pred ---------------------CEEEEEeCCCCCCc----------------hhHHHHHHHHHHhCCCCCeEEEecCCCCH
Confidence 25677787754211 1112222233234677889998865
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~ 694 (732)
+++..+|++||++++||. .|+||++++||||||+|||+|+.+|..++|.++.+|+++++ . ++++.+|..++.++
T Consensus 265 ~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~--~--~~~a~~i~~ll~~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDT--V--EEAAVRILYLLRDP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeCC--c--HHHHHHHHHHHcCH
Confidence 789999999999999998 99999999999999999999999999999999999999874 3 67899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 695 SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 695 ~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+.+++|++++++.+.+.|+|+.++++++++|+++
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 339 ELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 9999999999999988999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=290.43 Aligned_cols=328 Identities=16% Similarity=0.156 Sum_probs=244.5
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCC-CChhHHHhCCcEEEEcCCCch-----------hhhhcC
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG-GLMPELARRKIKVLEDRGEPS-----------FKTSMK 311 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g-~l~~el~~~gI~v~~~~~~~~-----------~~~~~k 311 (732)
||+++++.+..||++..+.+++++|.+.||+|.+++..... .+...+...++.++....... +....+
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNK 80 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCC
Confidence 69999999999999999999999999999999999976544 355667778888876443321 223679
Q ss_pred ccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH---hHH-----H-hhhhhccccEEEEecHHhHHHhhhHHHh
Q 004760 312 ADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---YFD-----R-AKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 312 ~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~---~~~-----~-~~~~l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
||+||+++... .++...+... .+.+.++.+.|..... +.. . .......++.++++|+..... .
T Consensus 81 ~Dvv~~~~~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~----~-- 152 (358)
T cd03812 81 YDIVHVHGSSA-SGFILLAAKK-AGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKW----L-- 152 (358)
T ss_pred CCEEEEeCcch-hHHHHHHHhh-CCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHH----H--
Confidence 99999997653 3333333333 4445444444432110 000 0 112233477888888875332 2
Q ss_pred hhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHH
Q 004760 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLV 462 (732)
Q Consensus 383 e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LL 462 (732)
... ..+ ..+.+||||+|...+.+.... +.. ++..+..++.+.|+++|++.+.||++.++
T Consensus 153 --~~~-~~~-----------~~~~vi~ngvd~~~~~~~~~~------~~~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li 211 (358)
T cd03812 153 --FGK-VKN-----------KKFKVIPNGIDLEKFIFNEEI------RKK-RRELGILEDKFVIGHVGRFSEQKNHEFLI 211 (358)
T ss_pred --HhC-CCc-----------ccEEEEeccCcHHHcCCCchh------hhH-HHHcCCCCCCEEEEEEeccccccChHHHH
Confidence 111 111 234899999999887654331 122 56678888899999999999999999999
Q ss_pred HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcc
Q 004760 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (732)
Q Consensus 463 eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf 542 (732)
+|+..+.++.++
T Consensus 212 ~a~~~l~~~~~~-------------------------------------------------------------------- 223 (358)
T cd03812 212 EIFAELLKKNPN-------------------------------------------------------------------- 223 (358)
T ss_pred HHHHHHHHhCCC--------------------------------------------------------------------
Confidence 999999877665
Q ss_pred cccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHH
Q 004760 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYS 622 (732)
Q Consensus 543 ~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lys 622 (732)
.+++++|+|+..+.++..+. .+++.++|.|+|+.+++.++|+
T Consensus 224 -----------------~~l~ivG~g~~~~~~~~~~~---------------------~~~~~~~v~~~g~~~~~~~~~~ 265 (358)
T cd03812 224 -----------------AKLLLVGDGELEEEIKKKVK---------------------ELGLEDKVIFLGVRNDVPELLQ 265 (358)
T ss_pred -----------------eEEEEEeCCchHHHHHHHHH---------------------hcCCCCcEEEecccCCHHHHHH
Confidence 35778888876665555442 3378899999999999999999
Q ss_pred HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 623 AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702 (732)
Q Consensus 623 aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~ 702 (732)
.||++|+||. .|+||++++||||+|+|||+|+.||..|++++ ..|++..++++ ++++++|.++++||+.++.+..
T Consensus 266 ~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~--~~~a~~i~~l~~~~~~~~~~~~ 340 (358)
T cd03812 266 AMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESP--EIWAEEILKLKSEDRRERSSES 340 (358)
T ss_pred hcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCH--HHHHHHHHHHHhCcchhhhhhh
Confidence 9999999998 89999999999999999999999999999998 45666666666 9999999999999999999988
Q ss_pred HHHHHHHHh
Q 004760 703 EGRKKVERM 711 (732)
Q Consensus 703 ~~r~~v~~~ 711 (732)
.+.......
T Consensus 341 ~~~~~~~~~ 349 (358)
T cd03812 341 IKKKGLDAD 349 (358)
T ss_pred hhhccchhh
Confidence 887665543
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=305.35 Aligned_cols=348 Identities=17% Similarity=0.205 Sum_probs=249.8
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHH----CCC--------EEEEEEe--CCCCC---ChhHHHhCCcEEEEcCCCch-
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLS----CGA--------TVSAVVL--SKRGG---LMPELARRKIKVLEDRGEPS- 305 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~----~G~--------~V~vv~l--~~~g~---l~~el~~~gI~v~~~~~~~~- 305 (732)
.+++++.+|+.||||+.+.++|-++++ .|- .|.++|= ...++ +.+.+...+|++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (578)
T PRK15490 163 RLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGN 242 (578)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchh
Confidence 478999999999999999966666654 333 4556653 23333 35667778888865321111
Q ss_pred --------------------------------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech----h
Q 004760 306 --------------------------------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----R 349 (732)
Q Consensus 306 --------------------------------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r----~ 349 (732)
+.++.+||+||++.. ..++...+++..++.+.++...|-.. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~--~a~l~g~laA~lagvpviv~~~h~~~~~~~~ 320 (578)
T PRK15490 243 LFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQD--GACLMIALAALIAGVPRIQLGLRGLPPVVRK 320 (578)
T ss_pred hhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCc--ccHHHHHHHHHhcCCCEEEEeecccCCcchh
Confidence 344899999998863 34455667777778886666543211 1
Q ss_pred HhHHHhhhhhccccE------EEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhH
Q 004760 350 EYFDRAKLVLDRVKL------LVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR 423 (732)
Q Consensus 350 ~~~~~~~~~l~r~~~------li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ 423 (732)
+........+.+... ++..+...+..... .++.++ ..+.+||||+|++.|.+....
T Consensus 321 r~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~l~~-------~lgip~-----------~KI~VIyNGVD~~rf~p~~~~ 382 (578)
T PRK15490 321 RLFKPEYEPLYQALAVVPGVDFMSNNHCVTRHYAD-------WLKLEA-----------KHFQVVYNGVLPPSTEPSSEV 382 (578)
T ss_pred hHHHHHHHHhhhhceeEecchhhhccHHHHHHHHH-------HhCCCH-----------HHEEEEeCCcchhhcCccchh
Confidence 111111111111122 23333332221111 123322 245899999999988775421
Q ss_pred HHhHHhHHHHHH--HhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccc
Q 004760 424 EKRNLLRDSVRK--EMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRG 501 (732)
Q Consensus 424 ekr~~~r~~~R~--~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g 501 (732)
. ...|. ..++++++++|+++|++.+.||++.+|+++..+.++.|+
T Consensus 383 ~------~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pd--------------------------- 429 (578)
T PRK15490 383 P------HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPA--------------------------- 429 (578)
T ss_pred h------HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCC---------------------------
Confidence 1 11222 245566778899999999999999999999988766554
Q ss_pred cccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhcc
Q 004760 502 RGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSV 581 (732)
Q Consensus 502 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~ 581 (732)
.+++++|+|+..+.++.++.
T Consensus 430 ----------------------------------------------------------irLvIVGdG~~~eeLk~la~-- 449 (578)
T PRK15490 430 ----------------------------------------------------------TRFVLVGDGDLRAEAQKRAE-- 449 (578)
T ss_pred ----------------------------------------------------------eEEEEEeCchhHHHHHHHHH--
Confidence 36888999987776666653
Q ss_pred CCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChh
Q 004760 582 GSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTK 661 (732)
Q Consensus 582 G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~ 661 (732)
.+++.++|+|+|+.+++..+|++||+||+||. .|+||++++||||||+|||+|+.||..
T Consensus 450 -------------------elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~ 508 (578)
T PRK15490 450 -------------------QLGILERILFVGASRDVGYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSA 508 (578)
T ss_pred -------------------HcCCCCcEEECCChhhHHHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcH
Confidence 33788999999999999999999999999998 999999999999999999999999999
Q ss_pred hhhccCceEEEECCCCCcHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 662 EIVEHNVTGLLHPPGHPGAQVLAQNL---RYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 662 EiVe~g~~Gll~~~~d~~~e~La~aL---~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
|+|.++.+|++++++|. +.+++++ ..+.+..+.+..|++++++.++++|||+.|+++|.++|..
T Consensus 509 EiV~dG~nG~LVp~~D~--~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 509 ECFIEGVSGFILDDAQT--VNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHcccCCcEEEECCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999999999999887 7787776 4455555566679999999999999999999999999975
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=292.86 Aligned_cols=340 Identities=20% Similarity=0.246 Sum_probs=247.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCC-Ch-hHHH----hCCcEEEEcC----------------
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LM-PELA----RRKIKVLEDR---------------- 301 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~-l~-~el~----~~gI~v~~~~---------------- 301 (732)
||.+|+...- .=.|..+.+-...|.++|++|.++++..... .. +..+ ...+.++...
T Consensus 2 ~ia~~~~~~P-~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (406)
T PRK15427 2 KVGFFLLKFP-LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQTL 80 (406)
T ss_pred eEEEEeccCC-ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhHh
Confidence 6788877765 4568899999999999999999999754321 11 1111 1111111000
Q ss_pred -------------CCc----h-----------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech---hH
Q 004760 302 -------------GEP----S-----------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR---RE 350 (732)
Q Consensus 302 -------------~~~----~-----------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r---~~ 350 (732)
... . ..+..+||+||+|...+. +....+.....-..+++.+.|..- ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~-~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~ 159 (406)
T PRK15427 81 RGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAG-VTAAKLRELGVLRGKIATIFHGIDISSRE 159 (406)
T ss_pred hhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHH-HHHHHHHHhCCCCCCeEEEEcccccccch
Confidence 000 0 012568999999986543 222333332111122344555311 11
Q ss_pred ----hHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHh
Q 004760 351 ----YFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKR 426 (732)
Q Consensus 351 ----~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr 426 (732)
+.......+.+.+.++++|+..... . ...+..+ ..+.+||||+|...|.+....
T Consensus 160 ~~~~~~~~~~~~~~~ad~vv~~S~~~~~~----l----~~~g~~~-----------~ki~vi~nGvd~~~f~~~~~~--- 217 (406)
T PRK15427 160 VLNHYTPEYQQLFRRGDLMLPISDLWAGR----L----QKMGCPP-----------EKIAVSRMGVDMTRFSPRPVK--- 217 (406)
T ss_pred hhhhhhHHHHHHHHhCCEEEECCHHHHHH----H----HHcCCCH-----------HHEEEcCCCCCHHHcCCCccc---
Confidence 1122334556788999999985432 2 1223222 235899999999888653210
Q ss_pred HHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccccccc
Q 004760 427 NLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQ 506 (732)
Q Consensus 427 ~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~ 506 (732)
...+.+.|+++|++.+.||++.+++|++.+.++.++
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~-------------------------------- 253 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVA-------------------------------- 253 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC--------------------------------
Confidence 123456799999999999999999999999766554
Q ss_pred ccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCC
Q 004760 507 MSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSN 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~ 586 (732)
.++.++|+|+..+.++.++..
T Consensus 254 -----------------------------------------------------~~l~ivG~G~~~~~l~~~~~~------ 274 (406)
T PRK15427 254 -----------------------------------------------------FRYRILGIGPWERRLRTLIEQ------ 274 (406)
T ss_pred -----------------------------------------------------EEEEEEECchhHHHHHHHHHH------
Confidence 357888999877777666643
Q ss_pred ChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCC----CCCCCcHHHHHHHHcCCCEEEcCCCCh
Q 004760 587 KVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQG----LGETFGRVTIEAMAFGVPVLGTDAGGT 660 (732)
Q Consensus 587 ~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~----~~Egfg~vilEAMA~GlPVI~td~gG~ 660 (732)
+++.++|.|+|+. +++.++|+.||++|+||.. -.||+|++++||||||+|||+|+.||+
T Consensus 275 ---------------~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~ 339 (406)
T PRK15427 275 ---------------YQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI 339 (406)
T ss_pred ---------------cCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCc
Confidence 3788999999976 7899999999999999961 039999999999999999999999999
Q ss_pred hhhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 661 KEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 661 ~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
+|+|+++.+|++++++|+ ++|+++|..+++ |++.+++|++++++.++++|+|+.+++++.++|+.
T Consensus 340 ~E~v~~~~~G~lv~~~d~--~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 340 PELVEADKSGWLVPENDA--QALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred hhhhcCCCceEEeCCCCH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999999988 999999999999 99999999999999999999999999999999976
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=289.23 Aligned_cols=343 Identities=18% Similarity=0.242 Sum_probs=246.0
Q ss_pred CeEEEEeC-CC-----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc------------
Q 004760 243 RKFILIFH-EL-----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP------------ 304 (732)
Q Consensus 243 ~kIllI~h-~l-----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~------------ 304 (732)
.||++++. -+ ..||+|.++.++|++|.. +|++++....|--..+....|+.++..+...
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRL 79 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhcc
Confidence 45555543 34 379999999999999943 9999998777522444556666665442211
Q ss_pred ------h----hhh---hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHH
Q 004760 305 ------S----FKT---SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSES 371 (732)
Q Consensus 305 ------~----~~~---~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~ 371 (732)
. +.. ..++|+|++|.... +...+.....+. +++.++|.. +.+ ..+.+...++++|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~---~~~~~~~~~~~~-~~v~~~h~~---~~~---~~~~~~~~ii~~S~~ 149 (380)
T PRK15484 80 DPLPYSQRILNIAHKFTITKDSVIVIHNSMK---LYRQIRERAPQA-KLVMHMHNA---FEP---ELLDKNAKIIVPSQF 149 (380)
T ss_pred CchhHHHHHHHHHHhcCCCCCcEEEEeCcHH---hHHHHHhhCCCC-CEEEEEecc---cCh---hHhccCCEEEEcCHH
Confidence 0 111 35699999887332 222233333233 455555432 211 123456778999988
Q ss_pred hHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEec
Q 004760 372 QTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSS 451 (732)
Q Consensus 372 ~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGr 451 (732)
.... + ...... ..+.+||||+|...|.+... ..+++.++++.+..+|+++|+
T Consensus 150 ~~~~----~-----~~~~~~-----------~~i~vIpngvd~~~~~~~~~--------~~~~~~~~~~~~~~~il~~Gr 201 (380)
T PRK15484 150 LKKF----Y-----EERLPN-----------ADISIVPNGFCLETYQSNPQ--------PNLRQQLNISPDETVLLYAGR 201 (380)
T ss_pred HHHH----H-----HhhCCC-----------CCEEEecCCCCHHHcCCcch--------HHHHHHhCCCCCCeEEEEecc
Confidence 6442 2 111111 12489999999988876432 345778899888889999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 452 INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 452 i~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
+.+.||++.|++|+..+.++.|+
T Consensus 202 l~~~Kg~~~Li~A~~~l~~~~p~--------------------------------------------------------- 224 (380)
T PRK15484 202 ISPDKGILLLMQAFEKLATAHSN--------------------------------------------------------- 224 (380)
T ss_pred CccccCHHHHHHHHHHHHHhCCC---------------------------------------------------------
Confidence 99999999999999999877665
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~ 611 (732)
.+++++|+|+.... .....|.+++.+ +.+.+ ..++.|+
T Consensus 225 ----------------------------~~lvivG~g~~~~~-----------~~~~~~~~~l~~-~~~~l--~~~v~~~ 262 (380)
T PRK15484 225 ----------------------------LKLVVVGDPTASSK-----------GEKAAYQKKVLE-AAKRI--GDRCIML 262 (380)
T ss_pred ----------------------------eEEEEEeCCccccc-----------cchhHHHHHHHH-HHHhc--CCcEEEe
Confidence 25667777653210 011123333333 22332 3579999
Q ss_pred cch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEE-EECCCCCcHHHHHHHHH
Q 004760 612 PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGL-LHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 612 G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gl-l~~~~d~~~e~La~aL~ 688 (732)
|+. +++..+|++||++|+||.+ .|+||++++||||||+|||+|+.||+.|++.++.+|+ ++++.|+ ++|+++|.
T Consensus 263 G~~~~~~l~~~~~~aDv~v~pS~~-~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~--~~la~~I~ 339 (380)
T PRK15484 263 GGQPPEKMHNYYPLADLVVVPSQV-EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTS--DSIISDIN 339 (380)
T ss_pred CCCCHHHHHHHHHhCCEEEeCCCC-ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCH--HHHHHHHH
Confidence 975 6899999999999999973 6999999999999999999999999999999999998 5577777 99999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 689 ~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.+++|++. .+|++++++.+.++|+|+.+++++.++|++..
T Consensus 340 ~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 340 RTLADPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 99999985 78999999999999999999999999998753
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=281.01 Aligned_cols=343 Identities=21% Similarity=0.303 Sum_probs=245.0
Q ss_pred eEEEEeCCCC---CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch--------------h
Q 004760 244 KFILIFHELS---MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS--------------F 306 (732)
Q Consensus 244 kIllI~h~ls---~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~--------------~ 306 (732)
||++|++... .||++..+.+||.+|.+. ++|.|++... + .....++++...+.... +
T Consensus 2 kI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (388)
T TIGR02149 2 KVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGD-Q----RFDSEGLTVKGYRPWSELKEANKALGTFSVDL 75 (388)
T ss_pred eeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCC-c----hhcCCCeEEEEecChhhccchhhhhhhhhHHH
Confidence 6899988775 399999999999999887 7777777432 2 13356777764432221 0
Q ss_pred ---hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh-------------HhHHH-hhhhhccccEEEEec
Q 004760 307 ---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-------------EYFDR-AKLVLDRVKLLVFLS 369 (732)
Q Consensus 307 ---~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~-------------~~~~~-~~~~l~r~~~li~vS 369 (732)
....++|+||+|+.... +...++....+.+ +++.+|.... .++.. .+..+..++.++++|
T Consensus 76 ~~~~~~~~~divh~~~~~~~--~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 152 (388)
T TIGR02149 76 AMANDPVDADVVHSHTWYTF--LAGHLAKKLYDKP-LVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVS 152 (388)
T ss_pred HHhhCCCCCCeEeecchhhh--hHHHHHHHhcCCC-EEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEcc
Confidence 11347999999863322 2233444444555 5555654210 01111 123445588899999
Q ss_pred HHhHHHhhhHHHhhhhhc--cCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEE
Q 004760 370 ESQTKQWLTWCEEEKLKL--RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVL 447 (732)
Q Consensus 370 ~~~~~~~~~~~~~e~i~l--~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil 447 (732)
+..... . .+. +..+ ..+.+||||+|...+.+... ...+++++++.+.++|+
T Consensus 153 ~~~~~~----~----~~~~~~~~~-----------~~i~vi~ng~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 205 (388)
T TIGR02149 153 GGMRED----I----LKYYPDLDP-----------EKVHVIYNGIDTKEYKPDDG--------NVVLDRYGIDRSRPYIL 205 (388)
T ss_pred HHHHHH----H----HHHcCCCCc-----------ceEEEecCCCChhhcCCCch--------HHHHHHhCCCCCceEEE
Confidence 886432 1 111 1111 23589999999998876432 45688899988888999
Q ss_pred EEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhc
Q 004760 448 SLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQ 527 (732)
Q Consensus 448 ~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~ 527 (732)
++|++.+.||++.+++|++.+.. +
T Consensus 206 ~~Grl~~~Kg~~~li~a~~~l~~---~----------------------------------------------------- 229 (388)
T TIGR02149 206 FVGRITRQKGVPHLLDAVHYIPK---D----------------------------------------------------- 229 (388)
T ss_pred EEcccccccCHHHHHHHHHHHhh---c-----------------------------------------------------
Confidence 99999999999999999998731 1
Q ss_pred cCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCC-CC
Q 004760 528 LNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNL-SK 606 (732)
Q Consensus 528 ~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l-~~ 606 (732)
.+++++|.|+....+. +++.+.+. .++. .+
T Consensus 230 --------------------------------~~l~i~g~g~~~~~~~----------------~~~~~~~~-~~~~~~~ 260 (388)
T TIGR02149 230 --------------------------------VQVVLCAGAPDTPEVA----------------EEVRQAVA-LLDRNRT 260 (388)
T ss_pred --------------------------------CcEEEEeCCCCcHHHH----------------HHHHHHHH-HhccccC
Confidence 1345556554332222 12222221 1133 24
Q ss_pred cEEEc-cc--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcH---
Q 004760 607 AMLWT-PA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGA--- 680 (732)
Q Consensus 607 ~V~f~-G~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~--- 680 (732)
+|.|. |. .+++..+|++||++|+||. .|+||++++|||+||+|||+|+.||..|+++++.+|++++++|.+.
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 261 GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 57765 43 4789999999999999998 8999999999999999999999999999999999999998876422
Q ss_pred -HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 681 -QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 681 -e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
++|+++|.++++|++.+++|++++++.+.++|+|+.+++++.++|++++
T Consensus 339 ~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 339 QAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 6899999999999999999999999999889999999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-31 Score=288.45 Aligned_cols=341 Identities=16% Similarity=0.204 Sum_probs=237.8
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch------------------
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS------------------ 305 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~------------------ 305 (732)
|||+|...+- -..-+||.+|.++||+|++++......... |++++.......
T Consensus 1 ~il~~~~~~p-----~~~~~la~~L~~~G~~v~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (396)
T cd03818 1 RILFVHQNFP-----GQFRHLAPALAAQGHEVVFLTEPNAAPPPG-----GVRVVRYRPPRGPTSGTHPYLREFEEAVLR 70 (396)
T ss_pred CEEEECCCCc-----hhHHHHHHHHHHCCCEEEEEecCCCCCCCC-----CeeEEEecCCCCCCCCCCccchhHHHHHHH
Confidence 4677766654 335689999999999999999766544322 788776553311
Q ss_pred ----------h-hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEE--Eee--ch---------hHh--HHH-----
Q 004760 306 ----------F-KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWW--IME--NR---------REY--FDR----- 354 (732)
Q Consensus 306 ----------~-~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~--i~e--~r---------~~~--~~~----- 354 (732)
+ .+.++||+||+|+...... ++.....+.+.+.+. .+. .. ... ..+
T Consensus 71 ~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~---~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
T cd03818 71 GQAVARALLALRAKGFRPDVIVAHPGWGETL---FLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRN 147 (396)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCccchhh---hHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhh
Confidence 1 1256899999997543221 122222222322211 110 00 000 011
Q ss_pred --hhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHH
Q 004760 355 --AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDS 432 (732)
Q Consensus 355 --~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~ 432 (732)
....+..++.+++.|+.+... + .... . ..+.+||||+|++.|.+..... ..
T Consensus 148 ~~~~~~~~~ad~vi~~s~~~~~~----~-----~~~~-~-----------~ki~vI~ngvd~~~f~~~~~~~------~~ 200 (396)
T cd03818 148 ALILLALAQADAGVSPTRWQRST----F-----PAEL-R-----------SRISVIHDGIDTDRLRPDPQAR------LR 200 (396)
T ss_pred hHhHHHHHhCCEEECCCHHHHhh----C-----cHhh-c-----------cceEEeCCCccccccCCCchhh------hc
Confidence 112355688899998887442 1 0000 0 1348999999999998754321 12
Q ss_pred HHHHhCCCCCCEEEEEEec-CCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccc
Q 004760 433 VRKEMGLTDQDMLVLSLSS-INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDV 511 (732)
Q Consensus 433 ~R~~lgl~~~~~lil~vGr-i~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~ 511 (732)
.+...++.+++++|+++|| +.+.||++.+++|+..+.++.|+
T Consensus 201 ~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~------------------------------------- 243 (396)
T cd03818 201 LPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPD------------------------------------- 243 (396)
T ss_pred ccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCC-------------------------------------
Confidence 3334446677889999997 99999999999999999877665
Q ss_pred cCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCC-Chhh
Q 004760 512 GLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSN-KVPY 590 (732)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~-~~~y 590 (732)
.+++++|++.. .+|.... ...+
T Consensus 244 ------------------------------------------------~~lvivG~~~~---------~~g~~~~~~~~~ 266 (396)
T cd03818 244 ------------------------------------------------ARVVIVGGDGV---------SYGAPPPDGESW 266 (396)
T ss_pred ------------------------------------------------cEEEEEcCCCc---------ccCCCCCCcccH
Confidence 24556665320 0111111 1113
Q ss_pred HHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCc
Q 004760 591 VKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNV 668 (732)
Q Consensus 591 ~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~ 668 (732)
.+.+++.+...++ .++|+|+|++ +++..+|+.||++|+||. .|++|++++||||||+|||+|+.||..|++.++.
T Consensus 267 ~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~ 343 (396)
T cd03818 267 KQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITDGE 343 (396)
T ss_pred HHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhcccCC
Confidence 3344444433222 4789999986 689999999999999998 9999999999999999999999999999999999
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 669 TGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 669 ~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
+|++++++|+ ++|+++|..+++|++.+++|++++++.++++|+|+.++++|++
T Consensus 344 ~G~lv~~~d~--~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 344 NGLLVDFFDP--DALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred ceEEcCCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999999988 9999999999999999999999999999999999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=270.47 Aligned_cols=340 Identities=20% Similarity=0.215 Sum_probs=237.5
Q ss_pred eEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEE-----EE--cCC------Cch---
Q 004760 244 KFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKV-----LE--DRG------EPS--- 305 (732)
Q Consensus 244 kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v-----~~--~~~------~~~--- 305 (732)
||++|++.+ ..||++.++.+||++|.+.||+|.+++....... .......++. .. ... ...
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDP-LLVALNGVPVKLFSINVAYGLNLARYLFPPSLLA 79 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCcc-chhhccCceeeecccchhhhhhhhhhccChhHHH
Confidence 689999999 7899999999999999999999999996544332 1111111100 00 000 000
Q ss_pred --hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhH-------------HHhhhhhccccEEEEecH
Q 004760 306 --FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYF-------------DRAKLVLDRVKLLVFLSE 370 (732)
Q Consensus 306 --~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~-------------~~~~~~l~r~~~li~vS~ 370 (732)
.....++|+|++++................+.+ +++++|.....+. ......+...+.+++.+.
T Consensus 80 ~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 80 WLRLNIREADIVHVHGLWSYPSLAAARAARKYGIP-YVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred HHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCC-EEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCH
Confidence 122568999999874322222211111122333 5555543211110 011222333566666665
Q ss_pred HhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEe
Q 004760 371 SQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLS 450 (732)
Q Consensus 371 ~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vG 450 (732)
..... ....... ..+.+||||+|.+.+.+.... .. |+.++.+.+.++|+++|
T Consensus 159 ~~~~~---------~~~~~~~-----------~~~~vi~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G 210 (375)
T cd03821 159 QEAAE---------IRRLGLK-----------APIAVIPNGVDIPPFAALPSR-------GR-RRKFPILPDKRIILFLG 210 (375)
T ss_pred HHHHH---------HHhhCCc-----------ccEEEcCCCcChhccCcchhh-------hh-hhhccCCCCCcEEEEEe
Confidence 43221 1111111 234899999999988765431 12 77788888899999999
Q ss_pred cCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCC
Q 004760 451 SINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (732)
Q Consensus 451 ri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (732)
++.+.||++.+++|+..+.+++++
T Consensus 211 ~~~~~K~~~~li~a~~~l~~~~~~-------------------------------------------------------- 234 (375)
T cd03821 211 RLHPKKGLDLLIEAFAKLAERFPD-------------------------------------------------------- 234 (375)
T ss_pred CcchhcCHHHHHHHHHHhhhhcCC--------------------------------------------------------
Confidence 999999999999999999876554
Q ss_pred cccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEE
Q 004760 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610 (732)
Q Consensus 531 P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f 610 (732)
.+++++|.++... ...++.+.+.+++.++|.|
T Consensus 235 -----------------------------~~l~i~G~~~~~~-------------------~~~~~~~~~~~~~~~~v~~ 266 (375)
T cd03821 235 -----------------------------WHLVIAGPDEGGY-------------------RAELKQIAAALGLEDRVTF 266 (375)
T ss_pred -----------------------------eEEEEECCCCcch-------------------HHHHHHHHHhcCccceEEE
Confidence 2456666653211 1112222344588899999
Q ss_pred ccchh--hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHH
Q 004760 611 TPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 611 ~G~~~--dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~ 688 (732)
+|+++ ++..+|+.||++|+||. .|+||++++|||+||+|||+++.+|..|++.+ .+|++++.++ ++++++|.
T Consensus 267 ~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~i~ 340 (375)
T cd03821 267 TGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDDDV---DALAAALR 340 (375)
T ss_pred cCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCCCh---HHHHHHHH
Confidence 99885 89999999999999998 89999999999999999999999999999998 7898887543 89999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 689 ~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
.++++++.+++|++++++.+.++|+|+.+++++++
T Consensus 341 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 341 RALELPQRLKAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 99999999999999999998889999999998863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=310.63 Aligned_cols=357 Identities=12% Similarity=0.102 Sum_probs=253.6
Q ss_pred CCeEEEEeCCCC----CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCCh---hHH------------------HhCCcE
Q 004760 242 SRKFILIFHELS----MTGAPLSMMELATELLSCGATVSAVVLSKRGGLM---PEL------------------ARRKIK 296 (732)
Q Consensus 242 ~~kIllI~h~ls----~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~---~el------------------~~~gI~ 296 (732)
+.+|++|+-|.. .||-.-++..|+++|++.||+|.|+++....-.. ..+ ...|++
T Consensus 587 pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~ 666 (1036)
T PLN02316 587 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLS 666 (1036)
T ss_pred CcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCcE
Confidence 579999998885 6899999999999999999999999964332100 001 113566
Q ss_pred EEEcCCCc------------h--------------hh--hhcCccEEEeCCchhhHHHHHHHHhhc----CCCccEEEEE
Q 004760 297 VLEDRGEP------------S--------------FK--TSMKADLVIAGSAVCATWIDQYITRFP----AGGSQVVWWI 344 (732)
Q Consensus 297 v~~~~~~~------------~--------------~~--~~~k~DlVia~Sav~~~~i~~~i~~~~----~~~~~ivw~i 344 (732)
++...... . +. ...+|||||+|.... .++..++.... ....+++..+
T Consensus 667 vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~t-alva~llk~~~~~~~~~~~p~V~Ti 745 (1036)
T PLN02316 667 VYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSS-APVAWLFKDHYAHYGLSKARVVFTI 745 (1036)
T ss_pred EEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChH-HHHHHHHHHhhhhhccCCCCEEEEe
Confidence 55433211 0 11 135899999996432 33333333211 1224577778
Q ss_pred eechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhcc-CCCccccccCCCccceEEeecCCCCCCCCCchhh-
Q 004760 345 MENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLR-SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKM- 422 (732)
Q Consensus 345 ~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~-~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~- 422 (732)
|... ......+..+...+.++++|+..... +. ... ..+ . ...+.+|+||+|+..|.|...
T Consensus 746 Hnl~-~~~n~lk~~l~~AD~ViTVS~tya~E---I~-----~~~~l~~-------~--~~Kl~vI~NGID~~~w~P~tD~ 807 (1036)
T PLN02316 746 HNLE-FGANHIGKAMAYADKATTVSPTYSRE---VS-----GNSAIAP-------H--LYKFHGILNGIDPDIWDPYNDN 807 (1036)
T ss_pred CCcc-cchhHHHHHHHHCCEEEeCCHHHHHH---HH-----hccCccc-------c--cCCEEEEECCccccccCCcccc
Confidence 7431 11112334556789999999986332 11 111 111 0 124589999999988766421
Q ss_pred -----------HHHhHHhHHHHHHHhCCCC-CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccc
Q 004760 423 -----------REKRNLLRDSVRKEMGLTD-QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKK 490 (732)
Q Consensus 423 -----------~ekr~~~r~~~R~~lgl~~-~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~ 490 (732)
.+.++..+..+|+++|++. +.++|++|||+.++||+++|++|+..+.+. +
T Consensus 808 ~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~---------------- 869 (1036)
T PLN02316 808 FIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N---------------- 869 (1036)
T ss_pred cccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----------------
Confidence 0111223467899999984 678999999999999999999999988542 1
Q ss_pred ccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchh
Q 004760 491 SSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ 570 (732)
Q Consensus 491 ~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~ 570 (732)
.+++++|.|++
T Consensus 870 ---------------------------------------------------------------------~qlVIvG~Gpd 880 (1036)
T PLN02316 870 ---------------------------------------------------------------------GQVVLLGSAPD 880 (1036)
T ss_pred ---------------------------------------------------------------------cEEEEEeCCCC
Confidence 25778888864
Q ss_pred h---hhHhhhhhccCCCCCChhhHHHHHHHHHhcCC--CCCcEEEccchhhH--HHHHHHcCEEEEccCCCCCCCcHHHH
Q 004760 571 Q---QALKILIGSVGSKSNKVPYVKEILEFLSQHSN--LSKAMLWTPATTRV--ASLYSAADVYVINSQGLGETFGRVTI 643 (732)
Q Consensus 571 ~---~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~--l~~~V~f~G~~~dv--~~lysaADv~V~pS~~~~Egfg~vil 643 (732)
. +.++.++ +.++ .+++|.|.+..++. ..+|++||+||+||+ +|+||++++
T Consensus 881 ~~~e~~l~~La---------------------~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqL 937 (1036)
T PLN02316 881 PRIQNDFVNLA---------------------NQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQL 937 (1036)
T ss_pred HHHHHHHHHHH---------------------HHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHH
Confidence 2 2223232 3333 35789988766553 379999999999998 999999999
Q ss_pred HHHHcCCCEEEcCCCChhhhhccC-------------ceEEEECCCCCcHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Q 004760 644 EAMAFGVPVLGTDAGGTKEIVEHN-------------VTGLLHPPGHPGAQVLAQNLRYLLKN-PSVRERMAMEGRKKVE 709 (732)
Q Consensus 644 EAMA~GlPVI~td~gG~~EiVe~g-------------~~Gll~~~~d~~~e~La~aL~~LL~n-~~~r~~m~~~~r~~v~ 709 (732)
|||+||+|+|++++||++|+|.++ .+|+++++.|+ ++|+.+|.+++.+ ++.+..++..+++.+.
T Consensus 938 EAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~--~aLa~AL~raL~~~~~~~~~~~~~~r~~m~ 1015 (1036)
T PLN02316 938 TAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADA--AGVDYALNRAISAWYDGRDWFNSLCKRVME 1015 (1036)
T ss_pred HHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCH--HHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999873 68999999988 9999999999986 4566778888888888
Q ss_pred HhcCHHHHHHHHHHHHHHhh
Q 004760 710 RMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 710 ~~ys~~~~~~~~~ev~~~~l 729 (732)
+.|||+.++++|+++|+.+.
T Consensus 1016 ~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1016 QDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred hhCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999875
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-30 Score=277.67 Aligned_cols=348 Identities=20% Similarity=0.262 Sum_probs=246.1
Q ss_pred CeEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChh-HHHhCCcEEEEcCCCch--------------
Q 004760 243 RKFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP-ELARRKIKVLEDRGEPS-------------- 305 (732)
Q Consensus 243 ~kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~-el~~~gI~v~~~~~~~~-------------- 305 (732)
..+++..+.. ..||++.++.+||++|.+.||+|.|++....++... .....++.++.......
T Consensus 7 ~~~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T cd03800 7 LHGSPLAQPGGADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDE 86 (398)
T ss_pred ccccccccCCCCCCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHH
Confidence 3344444433 379999999999999999999999999654433221 22345777765443110
Q ss_pred -------hhhhc--CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh----Hh-----------HHHhhhhhcc
Q 004760 306 -------FKTSM--KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR----EY-----------FDRAKLVLDR 361 (732)
Q Consensus 306 -------~~~~~--k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~----~~-----------~~~~~~~l~r 361 (732)
..... +||+||++....+ +....++ ...+.+ ++++.|.... .. .......+..
T Consensus 87 ~~~~~~~~~~~~~~~~Div~~~~~~~~-~~~~~~~-~~~~~~-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (398)
T cd03800 87 FADDLLRFLRREGGRPDLIHAHYWDSG-LVALLLA-RRLGIP-LVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRA 163 (398)
T ss_pred HHHHHHHHHHhcCCCccEEEEecCccc-hHHHHHH-hhcCCc-eEEEeecccccCCcccccccccchhhhhhHHHHHHhh
Confidence 11133 9999999864332 2222222 223333 4444443110 00 0111233445
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
++.+++.|+..... . ......+ ...+.+||||+|...|.+.... ...+++++.+.
T Consensus 164 ad~ii~~s~~~~~~----~----~~~~~~~----------~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~ 218 (398)
T cd03800 164 ADRVIASTPQEAEE----L----YSLYGAY----------PRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDP 218 (398)
T ss_pred CCEEEEcCHHHHHH----H----HHHcccc----------ccccEEECCCCCccceecccch-------hhHHHhhccCC
Confidence 88899998876332 1 1111111 1124899999999888665432 12256677778
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
++++|+++|++.+.||++.+++|+..+.++.++
T Consensus 219 ~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~----------------------------------------------- 251 (398)
T cd03800 219 DKPRILAVGRLDPRKGIDTLIRAYAELPELRER----------------------------------------------- 251 (398)
T ss_pred CCcEEEEEcccccccCHHHHHHHHHHHHHhCCC-----------------------------------------------
Confidence 889999999999999999999999999776554
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhc
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQH 601 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~ 601 (732)
.+++++|+|..... +.....++.+.+.
T Consensus 252 --------------------------------------~~l~i~G~~~~~~~---------------~~~~~~~~~~~~~ 278 (398)
T cd03800 252 --------------------------------------ANLVIVGGPRDDIL---------------AMDEEELRELARE 278 (398)
T ss_pred --------------------------------------eEEEEEECCCCcch---------------hhhhHHHHHHHHh
Confidence 24566666543110 1111123344455
Q ss_pred CCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCc
Q 004760 602 SNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 602 l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
+++.++|.|+|++ +++..+|+.||++++||. .|+||++++||||||+|||+++.+|..|+++++.+|++++++|+
T Consensus 279 ~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~- 355 (398)
T cd03800 279 LGVIDRVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDP- 355 (398)
T ss_pred cCCCceEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCH-
Confidence 5888899999986 689999999999999997 99999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
++++++|..++++++.+++|+.++++.++++|+|+.++++|.
T Consensus 356 -~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 356 -EALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 999999999999999999999999999988999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-30 Score=265.26 Aligned_cols=324 Identities=26% Similarity=0.373 Sum_probs=238.9
Q ss_pred eEEEEeCCCC-CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc------------h---hh
Q 004760 244 KFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP------------S---FK 307 (732)
Q Consensus 244 kIllI~h~ls-~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~------------~---~~ 307 (732)
||+++++.+. .||+++.+.+|+++|.+.||+|.+++.......... ...++.+....... . +.
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYE-LDPKIKVIDLGDKRDSKLLARFKKLRRLRKLL 79 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccc-cCCccceeecccccccchhccccchHHHHHhh
Confidence 6899999999 999999999999999999999999996655411111 12344444433211 0 33
Q ss_pred hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHH------hhhhhccccEEEEecHHhHHHhhhHHH
Q 004760 308 TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDR------AKLVLDRVKLLVFLSESQTKQWLTWCE 381 (732)
Q Consensus 308 ~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~------~~~~l~r~~~li~vS~~~~~~~~~~~~ 381 (732)
+..+||+||++... ...++.....+..+++.+.|......... .+..+..++.+++.|+.... .
T Consensus 80 ~~~~~d~i~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~- 149 (348)
T cd03820 80 KNNKPDVVISFLTS----LLTFLASLGLKIVKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRA-----L- 149 (348)
T ss_pred cccCCCEEEEcCch----HHHHHHHHhhccccEEEecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHH-----H-
Confidence 36799999998754 11222222233324555555432221111 23345568889999988621 1
Q ss_pred hhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHH
Q 004760 382 EEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 382 ~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~L 461 (732)
.... + ...+.++||+++.+.+.+. .+.+...++++|++.+.||++.+
T Consensus 150 ----~~~~-~----------~~~~~vi~~~~~~~~~~~~------------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 150 ----YYKK-F----------NKNVVVIPNPLPFPPEEPS------------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred ----hhcc-C----------CCCeEEecCCcChhhcccc------------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1111 1 1235899999998876543 12456789999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
++|++.+.+..++
T Consensus 197 ~~~~~~l~~~~~~------------------------------------------------------------------- 209 (348)
T cd03820 197 IEAWAKIAKKHPD------------------------------------------------------------------- 209 (348)
T ss_pred HHHHHHHHhcCCC-------------------------------------------------------------------
Confidence 9999999765544
Q ss_pred ccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHH
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLY 621 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~ly 621 (732)
.+++++|.|+....++.++ +.+++..+|.|.|..+++..+|
T Consensus 210 ------------------~~l~i~G~~~~~~~~~~~~---------------------~~~~~~~~v~~~g~~~~~~~~~ 250 (348)
T cd03820 210 ------------------WKLRIVGDGPEREALEALI---------------------KELGLEDRVILLGFTKNIEEYY 250 (348)
T ss_pred ------------------eEEEEEeCCCCHHHHHHHH---------------------HHcCCCCeEEEcCCcchHHHHH
Confidence 2567778776655554443 2337788999999999999999
Q ss_pred HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHH
Q 004760 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 622 saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m 700 (732)
+.||++++||. .|+||++++|||+||+|||+++. ++..+++.++.+|+++++.|. ++++++|.++++|++.+++|
T Consensus 251 ~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~i~~ll~~~~~~~~~ 326 (348)
T cd03820 251 AKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDV--EALAEALLRLMEDEELRKRM 326 (348)
T ss_pred HhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCH--HHHHHHHHHHHcCHHHHHHH
Confidence 99999999998 89999999999999999999997 456777887779999998887 99999999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHH
Q 004760 701 AMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 701 ~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
++++++.+ +.|+|+.++++|.
T Consensus 327 ~~~~~~~~-~~~~~~~~~~~~~ 347 (348)
T cd03820 327 GANARESA-ERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHH-HHhCHHHHHHHhc
Confidence 99997665 5699999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-30 Score=270.53 Aligned_cols=323 Identities=23% Similarity=0.289 Sum_probs=236.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCchhhhhcCccEEEeCCchhh
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCA 323 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~~~~~~k~DlVia~Sav~~ 323 (732)
||+++++..+.||+++.+.+++.+|.+.||+|.+++.... .........+||+||+|.....
T Consensus 2 kIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~------------------~~~~~~~~~~~diih~~~~~~~ 63 (365)
T cd03825 2 KVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK------------------ALISKIEIINADIVHLHWIHGG 63 (365)
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc------------------hhhhChhcccCCEEEEEccccC
Confidence 7999999999999999999999999999999999995433 1111234678999988764333
Q ss_pred HHHHHHHHhhcCCCccEEEEEeech----------------------------------hHhHHHhhhhh-ccccEEEEe
Q 004760 324 TWIDQYITRFPAGGSQVVWWIMENR----------------------------------REYFDRAKLVL-DRVKLLVFL 368 (732)
Q Consensus 324 ~~i~~~i~~~~~~~~~ivw~i~e~r----------------------------------~~~~~~~~~~l-~r~~~li~v 368 (732)
.+....+.....+. ++++.+|... ...+......+ .....+++.
T Consensus 64 ~~~~~~~~~~~~~~-~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 142 (365)
T cd03825 64 FLSIEDLSKLLDRK-PVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAP 142 (365)
T ss_pred ccCHHHHHHHHcCC-CEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEeh
Confidence 22222222222233 3566555210 00011111111 123456666
Q ss_pred cHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEE
Q 004760 369 SESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLS 448 (732)
Q Consensus 369 S~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~ 448 (732)
|+..... ..... ++. ...+.++|||+|...|.+... ...++.+++++++.++++
T Consensus 143 s~~~~~~---------~~~~~-----~~~----~~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~ 196 (365)
T cd03825 143 SRWLADC---------ARSSS-----LFK----GIPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILF 196 (365)
T ss_pred hHHHHHH---------HHhcc-----ccC----CCceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEE
Confidence 6654332 11111 001 123589999999998865433 456778899888888877
Q ss_pred EecCCC--CCCHHHHHHHHHHhHHh-CCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhh
Q 004760 449 LSSINP--GKGQLLLVESAQLMIEQ-EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESF 525 (732)
Q Consensus 449 vGri~~--~KG~d~LLeA~~~l~~~-~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~ 525 (732)
.|+... .||++.+++|+..+.++ .++
T Consensus 197 ~~~~~~~~~K~~~~ll~a~~~l~~~~~~~--------------------------------------------------- 225 (365)
T cd03825 197 GAVGGTDPRKGFDELIEALKRLAERWKDD--------------------------------------------------- 225 (365)
T ss_pred EecCCCccccCHHHHHHHHHHhhhccCCC---------------------------------------------------
Confidence 777665 89999999999988654 222
Q ss_pred hccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC
Q 004760 526 TQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS 605 (732)
Q Consensus 526 ~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~ 605 (732)
.+++++|+++..... ++.
T Consensus 226 ----------------------------------~~~~i~G~~~~~~~~----------------------------~~~ 243 (365)
T cd03825 226 ----------------------------------IELVVFGASDPEIPP----------------------------DLP 243 (365)
T ss_pred ----------------------------------eEEEEeCCCchhhhc----------------------------cCC
Confidence 246667776532210 344
Q ss_pred CcEEEccchh---hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHH
Q 004760 606 KAMLWTPATT---RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 606 ~~V~f~G~~~---dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
.+|.|+|+.+ ++..+|+.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|++++..|. ++
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~--~~ 319 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDP--ED 319 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCH--HH
Confidence 6799999864 68999999999999998 99999999999999999999999999999999889999998887 99
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 683 LAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 683 La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+++++.+++++++.+.+|++++++.+.+.|+|+.++++|.++|+++
T Consensus 320 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 320 LAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999998999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=289.59 Aligned_cols=359 Identities=16% Similarity=0.186 Sum_probs=245.2
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH---------H----------HhCCcEEEEc
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE---------L----------ARRKIKVLED 300 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e---------l----------~~~gI~v~~~ 300 (732)
||++|+.|. ..||...++.+|+++|++.||+|.|++..- +..... + ...|++++..
T Consensus 2 ~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 2 KILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGY-PAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred eEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCC-cchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 799999885 378999999999999999999999999543 222211 1 2357777643
Q ss_pred CCCc-------------h-----h-------hh--hcCccEEEeCCchhhHHHHHHHHhhc-C--CCccEEEEEeechh-
Q 004760 301 RGEP-------------S-----F-------KT--SMKADLVIAGSAVCATWIDQYITRFP-A--GGSQVVWWIMENRR- 349 (732)
Q Consensus 301 ~~~~-------------~-----~-------~~--~~k~DlVia~Sav~~~~i~~~i~~~~-~--~~~~ivw~i~e~r~- 349 (732)
.... . | .. ..+||+||+|...+ ..+..++.+.. . ...+++..+|....
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~-~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~ 159 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHT-GLIPALLKEKYWRGYPDIKTVFTIHNLAYQ 159 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHH-HHHHHHHHHhhhccCCCCCEEEEcCCCcCC
Confidence 2110 0 1 11 24999999996433 33333443221 1 12446777764311
Q ss_pred -H--------------hH--H---------HhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccc
Q 004760 350 -E--------------YF--D---------RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELA 403 (732)
Q Consensus 350 -~--------------~~--~---------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~ 403 (732)
. ++ + ..+..+...+.++++|+...+. ........+... ......+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~e----i~~~~~~~gl~~-~~~~~~~---- 230 (466)
T PRK00654 160 GLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYARE----ITTPEFGYGLEG-LLRARSG---- 230 (466)
T ss_pred CcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHH----hccccCCcChHH-HHHhccc----
Confidence 0 00 0 0112244578899999886432 100000000000 0000012
Q ss_pred eEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC-CCEEEEEEecCCCCCCHHHHHHHHHHhHHh
Q 004760 404 FVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD-QDMLVLSLSSINPGKGQLLLVESAQLMIEQ 471 (732)
Q Consensus 404 ~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~-~~~lil~vGri~~~KG~d~LLeA~~~l~~~ 471 (732)
.+.+||||+|+..|.|.... +.....+..+|+++|+++ +.++|+++||+.++||++.+++|+..+.++
T Consensus 231 ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~ 310 (466)
T PRK00654 231 KLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ 310 (466)
T ss_pred CceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc
Confidence 35899999999988764210 011123467899999985 678999999999999999999999988643
Q ss_pred CCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCcc
Q 004760 472 EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAV 551 (732)
Q Consensus 472 ~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v 551 (732)
+
T Consensus 311 --~----------------------------------------------------------------------------- 311 (466)
T PRK00654 311 --G----------------------------------------------------------------------------- 311 (466)
T ss_pred --C-----------------------------------------------------------------------------
Confidence 2
Q ss_pred ccCCcccceeEEeccCchh--hhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEE-Eccchhh-HHHHHHHcCEE
Q 004760 552 SFGSGHLRRKVLSKSDGKQ--QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTR-VASLYSAADVY 627 (732)
Q Consensus 552 ~iG~~~~~~~LlivG~G~~--~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~-f~G~~~d-v~~lysaADv~ 627 (732)
.+++++|+|+. .+.++.+ .+.++ .++. +.|+.++ +..+|++||++
T Consensus 312 --------~~lvivG~g~~~~~~~l~~l---------------------~~~~~--~~v~~~~g~~~~~~~~~~~~aDv~ 360 (466)
T PRK00654 312 --------GQLVLLGTGDPELEEAFRAL---------------------AARYP--GKVGVQIGYDEALAHRIYAGADMF 360 (466)
T ss_pred --------CEEEEEecCcHHHHHHHHHH---------------------HHHCC--CcEEEEEeCCHHHHHHHHhhCCEE
Confidence 24677787742 1222222 23333 3454 5677644 67899999999
Q ss_pred EEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccC------ceEEEECCCCCcHHHHHHHHHHHhc---CHHHHH
Q 004760 628 VINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN------VTGLLHPPGHPGAQVLAQNLRYLLK---NPSVRE 698 (732)
Q Consensus 628 V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g------~~Gll~~~~d~~~e~La~aL~~LL~---n~~~r~ 698 (732)
|+||. .|+||++++|||+||+|+|++++||+.|+|.++ .+|++++++|+ ++|+++|.++++ +++.+.
T Consensus 361 v~PS~--~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~--~~la~~i~~~l~~~~~~~~~~ 436 (466)
T PRK00654 361 LMPSR--FEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNA--EDLLRALRRALELYRQPPLWR 436 (466)
T ss_pred EeCCC--CCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCH--HHHHHHHHHHHHHhcCHHHHH
Confidence 99998 999999999999999999999999999999887 89999999988 999999998876 777788
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 699 RMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 699 ~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+|+.++.+ +.|+|++++++|.++|++++.
T Consensus 437 ~~~~~~~~---~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 437 ALQRQAMA---QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhc---cCCChHHHHHHHHHHHHHHhh
Confidence 88887753 579999999999999998864
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-30 Score=291.07 Aligned_cols=363 Identities=16% Similarity=0.185 Sum_probs=248.8
Q ss_pred ccCCeEEEEeCCCC----CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH----------------------HhC
Q 004760 240 VWSRKFILIFHELS----MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL----------------------ARR 293 (732)
Q Consensus 240 ~~~~kIllI~h~ls----~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el----------------------~~~ 293 (732)
|.+.||++|+.|.. .||-.=++-.|.++|++.||+|.|+.+.- +.+.... ...
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY-PAVLAGIEDAEQVHSFPDLFGGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC-cchhhhhcCceEEEEEeeeCCceEEEEEEEeC
Confidence 56789999999984 68999999999999999999999998532 2221110 012
Q ss_pred CcEEEEcC--------C------------Cch-----hh-----------hhcCccEEEeCCchhhHHHHHHHHhhcCCC
Q 004760 294 KIKVLEDR--------G------------EPS-----FK-----------TSMKADLVIAGSAVCATWIDQYITRFPAGG 337 (732)
Q Consensus 294 gI~v~~~~--------~------------~~~-----~~-----------~~~k~DlVia~Sav~~~~i~~~i~~~~~~~ 337 (732)
||+++... . +.. |. ...+|||||+|...++ ++..++.......
T Consensus 80 ~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~-l~~~~l~~~~~~~ 158 (485)
T PRK14099 80 GLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAG-LAPAYLHYSGRPA 158 (485)
T ss_pred CceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHH-HHHHHHHhCCCCC
Confidence 44443211 0 010 11 1359999999974332 3333443211122
Q ss_pred ccEEEEEeechh----------------HhH-----------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCC
Q 004760 338 SQVVWWIMENRR----------------EYF-----------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQ 390 (732)
Q Consensus 338 ~~ivw~i~e~r~----------------~~~-----------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~ 390 (732)
.+.+..||.... .++ ...+..+.+.+.++++|+..+.. +...+ ...+..
T Consensus 159 ~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e---i~~~~-~g~gl~ 234 (485)
T PRK14099 159 PGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE---IQGPE-AGMGLD 234 (485)
T ss_pred CCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH---Hhccc-CCcChH
Confidence 346777774210 000 00223345688899999986432 11000 000000
Q ss_pred CccccccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCC
Q 004760 391 PAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKG 457 (732)
Q Consensus 391 ~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG 457 (732)
. +.... ...+.+|+||+|+..|.|.... +.+...+..+|+++|++. +.++|+++||+.++||
T Consensus 235 ~-~l~~~----~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG 309 (485)
T PRK14099 235 G-LLRQR----ADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKG 309 (485)
T ss_pred H-HHHhh----CCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCcccc
Confidence 0 00000 1235899999999988775321 111224567899999975 4678899999999999
Q ss_pred HHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 458 ~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
++.+++|+..+.++ +
T Consensus 310 ~d~Li~A~~~l~~~--~--------------------------------------------------------------- 324 (485)
T PRK14099 310 LDLLLEALPTLLGE--G--------------------------------------------------------------- 324 (485)
T ss_pred HHHHHHHHHHHHhc--C---------------------------------------------------------------
Confidence 99999999988542 1
Q ss_pred CCCcccccCCCCccccCCcccceeEEeccCchh--hhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcE-EEccch
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ--QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAM-LWTPAT 614 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~--~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V-~f~G~~ 614 (732)
.+++++|.|+. ++.++.++ +.++ +++ .|+|+.
T Consensus 325 ----------------------~~lvivG~G~~~~~~~l~~l~---------------------~~~~--~~v~~~~G~~ 359 (485)
T PRK14099 325 ----------------------AQLALLGSGDAELEARFRAAA---------------------QAYP--GQIGVVIGYD 359 (485)
T ss_pred ----------------------cEEEEEecCCHHHHHHHHHHH---------------------HHCC--CCEEEEeCCC
Confidence 24777888752 22233222 2222 344 799998
Q ss_pred hhHHHHH-HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccC---------ceEEEECCCCCcHHHHH
Q 004760 615 TRVASLY-SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN---------VTGLLHPPGHPGAQVLA 684 (732)
Q Consensus 615 ~dv~~ly-saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g---------~~Gll~~~~d~~~e~La 684 (732)
++++.+| ++||+||+||. .|+||++++|||+||+|+|++++||+.|+|.++ .+|+++++.|+ ++|+
T Consensus 360 ~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~--~~La 435 (485)
T PRK14099 360 EALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTA--DALA 435 (485)
T ss_pred HHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCH--HHHH
Confidence 8999987 56999999998 999999999999999999999999999999765 68999999988 9999
Q ss_pred HHHHH---HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 685 QNLRY---LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 685 ~aL~~---LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++|.+ +++|++.+++|+++++. +.|||++++++|+++|++++.
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHHHHh
Confidence 99987 77899999999999863 579999999999999999875
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=280.39 Aligned_cols=334 Identities=12% Similarity=0.162 Sum_probs=230.2
Q ss_pred CeEEEEeCCC-CCCcHHHHHHHHHHHHHHC--CCEEEEEEeCCCCCChhHHHhCCc----EEEEcC---CCc------hh
Q 004760 243 RKFILIFHEL-SMTGAPLSMMELATELLSC--GATVSAVVLSKRGGLMPELARRKI----KVLEDR---GEP------SF 306 (732)
Q Consensus 243 ~kIllI~h~l-s~gGA~~~~~eLA~~L~~~--G~~V~vv~l~~~g~l~~el~~~gI----~v~~~~---~~~------~~ 306 (732)
.||+++++.+ +.||+|.++.++|++|.+. |++|.+++..... ....+...++ +..... ... .+
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKM-DKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFSKW 79 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCC-ChHHHHhcchhcccccchhhhhcccHHHHHHHHH
Confidence 3799998877 4699999999999999999 8888888854332 2222332221 111111 111 13
Q ss_pred hhhcCccEEEeCCchhhHHHHHHHHhhcCCC-ccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhh
Q 004760 307 KTSMKADLVIAGSAVCATWIDQYITRFPAGG-SQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKL 385 (732)
Q Consensus 307 ~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~-~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i 385 (732)
.++.+||+||+++..+. +.. .++....+. ..+++|.|.............+...+.++++|+..... . .
T Consensus 80 l~~~~~Dii~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~d~~i~~S~~~~~~----~----~ 149 (359)
T PRK09922 80 LKETQPDIVICIDVISC-LYA-NKARKKSGKQFKIFSWPHFSLDHKKHAECKKITCADYHLAISSGIKEQ----M----M 149 (359)
T ss_pred HHhcCCCEEEEcCHHHH-HHH-HHHHHHhCCCCeEEEEecCcccccchhhhhhhhcCCEEEEcCHHHHHH----H----H
Confidence 34789999999975543 222 222222233 23444554221111111111235578889999886432 2 2
Q ss_pred hccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC--CCCCHHHHHH
Q 004760 386 KLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN--PGKGQLLLVE 463 (732)
Q Consensus 386 ~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~--~~KG~d~LLe 463 (732)
+.+..+ ..+.+||||+|.+.+...... .++++.++++||+. +.||++.+++
T Consensus 150 ~~~~~~-----------~ki~vi~N~id~~~~~~~~~~----------------~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 150 ARGISA-----------QRISVIYNPVEIKTIIIPPPE----------------RDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred HcCCCH-----------HHEEEEcCCCCHHHccCCCcc----------------cCCCcEEEEEEEEecccCcCHHHHHH
Confidence 223222 235899999997654321110 13457899999986 5699999999
Q ss_pred HHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCccc
Q 004760 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (732)
Q Consensus 464 A~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~ 543 (732)
|+..+.. +
T Consensus 203 a~~~~~~---~--------------------------------------------------------------------- 210 (359)
T PRK09922 203 GLSQTTG---E--------------------------------------------------------------------- 210 (359)
T ss_pred HHHhhCC---C---------------------------------------------------------------------
Confidence 9986621 1
Q ss_pred ccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch----hhHHH
Q 004760 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT----TRVAS 619 (732)
Q Consensus 544 ~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~----~dv~~ 619 (732)
.+++++|+|++.+.++.++ +.++++++|.|+|++ +++.+
T Consensus 211 ----------------~~l~ivG~g~~~~~l~~~~---------------------~~~~l~~~v~f~G~~~~~~~~~~~ 253 (359)
T PRK09922 211 ----------------WQLHIIGDGSDFEKCKAYS---------------------RELGIEQRIIWHGWQSQPWEVVQQ 253 (359)
T ss_pred ----------------eEEEEEeCCccHHHHHHHH---------------------HHcCCCCeEEEecccCCcHHHHHH
Confidence 3578889998766665555 334888899999976 45778
Q ss_pred HHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC-CCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHH
Q 004760 620 LYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD-AGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRE 698 (732)
Q Consensus 620 lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td-~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~ 698 (732)
+|+.||++|+||. .|+||++++||||||+|||+|+ .||..|+|.++.+|++++++|+ ++|+++|..+++|++.+.
T Consensus 254 ~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~--~~la~~i~~l~~~~~~~~ 329 (359)
T PRK09922 254 KIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNI--DEFVGKLNKVISGEVKYQ 329 (359)
T ss_pred HHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCH--HHHHHHHHHHHhCcccCC
Confidence 8889999999998 8999999999999999999999 8999999999999999999988 999999999999998542
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 699 RMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 699 ~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
..+......+|+.+++++++.++|...+.
T Consensus 330 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 330 ---HDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ---HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 22222333468889999999999998775
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=260.81 Aligned_cols=332 Identities=25% Similarity=0.313 Sum_probs=244.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch----------------hh
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS----------------FK 307 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~----------------~~ 307 (732)
||++|++. .+|++..+.+++++|.+.||+|.+++....... .+...++.++..+.... +.
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE--ELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLL 76 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc--ccccCCceEEeccccccccChHhHHHHHHHHHHHH
Confidence 68899888 789999999999999999999999985543322 45567888776654430 22
Q ss_pred hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh---------HhHHH-hhhhhccccEEEEecHHhHHHhh
Q 004760 308 TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR---------EYFDR-AKLVLDRVKLLVFLSESQTKQWL 377 (732)
Q Consensus 308 ~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~---------~~~~~-~~~~l~r~~~li~vS~~~~~~~~ 377 (732)
...+||+|++++.... ++ ..+.....+.+.++++++.... ..+.. .+..+...+.++++|+.....
T Consensus 77 ~~~~~dvv~~~~~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-- 152 (359)
T cd03808 77 RKERPDIVHTHTPKPG-IL-GRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL-- 152 (359)
T ss_pred HhcCCCEEEEccccch-hH-HHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH--
Confidence 3679999999864322 12 2222222344556665543211 11111 123334478899999886442
Q ss_pred hHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCC
Q 004760 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKG 457 (732)
Q Consensus 378 ~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG 457 (732)
+ ......+ ....+.++++++|...+.+.... ...+.+.|+++|++.+.||
T Consensus 153 --~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 --A----LKLGIIK---------KKKTVLIPGSGVDLDRFSPSPEP---------------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred --H----HHhcCCC---------cCceEEecCCCCChhhcCccccc---------------cCCCCcEEEEEeccccccC
Confidence 2 1111110 01234778899998877554320 2345678999999999999
Q ss_pred HHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 458 ~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
++.+++++..+.++.++
T Consensus 203 ~~~li~~~~~l~~~~~~--------------------------------------------------------------- 219 (359)
T cd03808 203 IDELLEAARILKAKGPN--------------------------------------------------------------- 219 (359)
T ss_pred HHHHHHHHHHHHhcCCC---------------------------------------------------------------
Confidence 99999999998765554
Q ss_pred CCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhH
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv 617 (732)
.+++++|.++........ +....+...+|.|+|+.+++
T Consensus 220 ----------------------~~l~i~G~~~~~~~~~~~--------------------~~~~~~~~~~v~~~g~~~~~ 257 (359)
T cd03808 220 ----------------------VRLLLVGDGDEENPAAIL--------------------EIEKLGLEGRVEFLGFRDDV 257 (359)
T ss_pred ----------------------eEEEEEcCCCcchhhHHH--------------------HHHhcCCcceEEEeeccccH
Confidence 246667776543333221 11223566899999999999
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVR 697 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r 697 (732)
.++|+.||++++||. .|++|++++|||+||+|||+++.++..|++.++.+|++++++|+ ++++++|..++.|++.+
T Consensus 258 ~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~--~~~~~~i~~l~~~~~~~ 333 (359)
T cd03808 258 PELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDA--EALADAIERLIEDPELR 333 (359)
T ss_pred HHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCH--HHHHHHHHHHHhCHHHH
Confidence 999999999999998 79999999999999999999999999999998899999998887 99999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 698 ERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 698 ~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
+++++++++.+.++|+++.+++++.
T Consensus 334 ~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 334 ARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999989999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=286.47 Aligned_cols=357 Identities=17% Similarity=0.194 Sum_probs=244.5
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH--------------------------HhC
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL--------------------------ARR 293 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el--------------------------~~~ 293 (732)
||++|+.|. ..||...++-.|+++|+++||+|.|+++.- +...... ...
T Consensus 2 ~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 2 RVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAY-GCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred eEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCC-cChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 799999984 479999999999999999999999999543 3222211 123
Q ss_pred CcEEEEcCCC--------------ch-------h-------hh--hcCccEEEeCCchhhHHHHHHHHhhcCC-CccEEE
Q 004760 294 KIKVLEDRGE--------------PS-------F-------KT--SMKADLVIAGSAVCATWIDQYITRFPAG-GSQVVW 342 (732)
Q Consensus 294 gI~v~~~~~~--------------~~-------~-------~~--~~k~DlVia~Sav~~~~i~~~i~~~~~~-~~~ivw 342 (732)
|++++..... .. | .. ..+||+||+|...+ ..+..++...... ..+++.
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~-~~~~~~l~~~~~~~~~~~v~ 159 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHT-ALVPALLKAVYRPNPIKTVF 159 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHH-HHHHHHHHhhccCCCCCEEE
Confidence 5665432211 00 1 11 36899999997433 2233334333221 244677
Q ss_pred EEeechh------HhHH---------------------HhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCcccc
Q 004760 343 WIMENRR------EYFD---------------------RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVP 395 (732)
Q Consensus 343 ~i~e~r~------~~~~---------------------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~ 395 (732)
.+|.... ..+. ..+..+...+.++++|+..... ........+... +..
T Consensus 160 TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~e----i~~~~~~~~l~~-~l~ 234 (473)
T TIGR02095 160 TIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYARE----ILTPEFGYGLDG-VLK 234 (473)
T ss_pred EcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHH----hcCCcCCccchh-HHH
Confidence 7764210 0000 0122345578889998875332 100000000000 000
Q ss_pred ccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCCHHHHH
Q 004760 396 LSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLLV 462 (732)
Q Consensus 396 l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG~d~LL 462 (732)
. ....+.+|+||+|.+.|.|.... +.+...+..+|+++|++. +.++|+++||+.++||++.++
T Consensus 235 ~----~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li 310 (473)
T TIGR02095 235 A----RSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLL 310 (473)
T ss_pred h----cCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHH
Confidence 0 01245899999999998864210 011123467899999986 678999999999999999999
Q ss_pred HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcc
Q 004760 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (732)
Q Consensus 463 eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf 542 (732)
+|+..+.++.
T Consensus 311 ~a~~~l~~~~---------------------------------------------------------------------- 320 (473)
T TIGR02095 311 AALPELLELG---------------------------------------------------------------------- 320 (473)
T ss_pred HHHHHHHHcC----------------------------------------------------------------------
Confidence 9999886431
Q ss_pred cccCCCCccccCCcccceeEEeccCch--hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHH
Q 004760 543 TSIGNTDAVSFGSGHLRRKVLSKSDGK--QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVA 618 (732)
Q Consensus 543 ~~~~~~d~v~iG~~~~~~~LlivG~G~--~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~ 618 (732)
.+++++|.|+ ..+.++.++ +. ...++.|.+.. +++.
T Consensus 321 -----------------~~lvi~G~g~~~~~~~l~~~~---------------------~~--~~~~v~~~~~~~~~~~~ 360 (473)
T TIGR02095 321 -----------------GQLVVLGTGDPELEEALRELA---------------------ER--YPGNVRVIIGYDEALAH 360 (473)
T ss_pred -----------------cEEEEECCCCHHHHHHHHHHH---------------------HH--CCCcEEEEEcCCHHHHH
Confidence 2577888874 122222222 22 23567666543 4578
Q ss_pred HHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccC------ceEEEECCCCCcHHHHHHHHHHHhc
Q 004760 619 SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN------VTGLLHPPGHPGAQVLAQNLRYLLK 692 (732)
Q Consensus 619 ~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g------~~Gll~~~~d~~~e~La~aL~~LL~ 692 (732)
.+|++||++++||. .|+||++++|||+||+|||+++.||+.|+|.++ .+|+++++.|+ ++|+++|.++++
T Consensus 361 ~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~--~~la~~i~~~l~ 436 (473)
T TIGR02095 361 LIYAGADFILMPSR--FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDP--GALLAALSRALR 436 (473)
T ss_pred HHHHhCCEEEeCCC--cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCH--HHHHHHHHHHHH
Confidence 99999999999998 999999999999999999999999999999987 89999999988 999999999887
Q ss_pred ----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 693 ----NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 693 ----n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+++.+++|++++.+ +.|||++++++|.++|+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 437 LYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHhC
Confidence 99999999988853 5799999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=272.19 Aligned_cols=329 Identities=25% Similarity=0.265 Sum_probs=238.7
Q ss_pred EEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc-----------------hhhh
Q 004760 246 ILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP-----------------SFKT 308 (732)
Q Consensus 246 llI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~-----------------~~~~ 308 (732)
++++.+...++++..+.+++..|. |++|.+++....+.........++.++...... .+.+
T Consensus 2 ~~~~~~~~~~~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (367)
T cd05844 2 VLIFRPLLLAPSETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQLRRLLR 79 (367)
T ss_pred EEEEeCCCCCCchHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccHHHHHHH
Confidence 345566666679999999999994 888888886655443333333444433111100 0244
Q ss_pred hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech----hH---------hHHHhhhhhccccEEEEecHHhHHH
Q 004760 309 SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----RE---------YFDRAKLVLDRVKLLVFLSESQTKQ 375 (732)
Q Consensus 309 ~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r----~~---------~~~~~~~~l~r~~~li~vS~~~~~~ 375 (732)
..+||+||++....+.+. .......+.+ +++.+|... .. +.......+...+.++++|+.....
T Consensus 80 ~~~~dvvh~~~~~~~~~~--~~~~~~~~~p-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 156 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYA--LPLARRLGVP-LVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDR 156 (367)
T ss_pred hhCCCEEEeccCchHHHH--HHHHHHcCCC-EEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHH
Confidence 789999999865432221 1122233444 455444210 00 0111223445588899999886442
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPG 455 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~ 455 (732)
+ ...+..+ ..+.++|||+|...|.+... ..+.+.++++|++.+.
T Consensus 157 ----~----~~~~~~~-----------~~i~vi~~g~d~~~~~~~~~-----------------~~~~~~i~~~G~~~~~ 200 (367)
T cd05844 157 ----L----LALGFPP-----------EKVHVHPIGVDTAKFTPATP-----------------ARRPPRILFVGRFVEK 200 (367)
T ss_pred ----H----HHcCCCH-----------HHeEEecCCCCHHhcCCCCC-----------------CCCCcEEEEEEeeccc
Confidence 2 1222222 23489999999888765432 1345689999999999
Q ss_pred CCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccccc
Q 004760 456 KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535 (732)
Q Consensus 456 KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n 535 (732)
||++.+++|+..+.++.++
T Consensus 201 K~~~~li~a~~~l~~~~~~------------------------------------------------------------- 219 (367)
T cd05844 201 KGPLLLLEAFARLARRVPE------------------------------------------------------------- 219 (367)
T ss_pred cChHHHHHHHHHHHHhCCC-------------------------------------------------------------
Confidence 9999999999999776654
Q ss_pred CCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch-
Q 004760 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT- 614 (732)
Q Consensus 536 ~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~- 614 (732)
.+++++|+|+..+.++.++. .+++.++|.|+|++
T Consensus 220 ------------------------~~l~ivG~g~~~~~~~~~~~---------------------~~~~~~~v~~~g~~~ 254 (367)
T cd05844 220 ------------------------VRLVIIGDGPLLAALEALAR---------------------ALGLGGRVTFLGAQP 254 (367)
T ss_pred ------------------------eEEEEEeCchHHHHHHHHHH---------------------HcCCCCeEEECCCCC
Confidence 35778888876655555543 33677899999987
Q ss_pred -hhHHHHHHHcCEEEEccCC----CCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 615 -TRVASLYSAADVYVINSQG----LGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 615 -~dv~~lysaADv~V~pS~~----~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+++..+|+.||++|+||.. ..|+||++++||||||+|||+++.+|..|++.++.+|+++++.|+ ++++++|.+
T Consensus 255 ~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~--~~l~~~i~~ 332 (367)
T cd05844 255 HAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDV--AALAAALGR 332 (367)
T ss_pred HHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCH--HHHHHHHHH
Confidence 7899999999999999961 149999999999999999999999999999999999999998887 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
+++|++.+++|+.++++.+++.|+|+.+++++.+
T Consensus 333 l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 333 LLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=259.16 Aligned_cols=329 Identities=26% Similarity=0.379 Sum_probs=240.4
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhC----CcEEEEcCCCch---------hhhhc
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARR----KIKVLEDRGEPS---------FKTSM 310 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~----gI~v~~~~~~~~---------~~~~~ 310 (732)
||+++++....||++..+.+|+++|.+.||+|.+++.............. ............ +....
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999965544322111100 011111111111 33367
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHH-------HhhhhhccccEEEEecHHhHHHhhhHHHhh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFD-------RAKLVLDRVKLLVFLSESQTKQWLTWCEEE 383 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~-------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e 383 (732)
+||+||+++. ...++...+.... ..++++++|........ .....+...+.++++|+..... +
T Consensus 81 ~~dii~~~~~-~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~----~--- 150 (353)
T cd03811 81 KPDVVISHLT-TTPNVLALLAARL--GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKED----L--- 150 (353)
T ss_pred CCCEEEEcCc-cchhHHHHHHhhc--CCceEEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhh----H---
Confidence 9999999986 3334444444333 34567777654332222 1234455688899999886443 2
Q ss_pred hhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHH
Q 004760 384 KLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVE 463 (732)
Q Consensus 384 ~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLe 463 (732)
.+....+ ...+.+||||+|...+.+..... ..++...+.+.|+++|++.+.||++.+++
T Consensus 151 -~~~~~~~----------~~~~~vi~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 209 (353)
T cd03811 151 -LKLLGIP----------PDKIEVIYNPIDIEEIRALAEEP----------LELGIPPDGPVILAVGRLSPQKGFDTLIR 209 (353)
T ss_pred -HHhhcCC----------ccccEEecCCcChhhcCcccchh----------hhcCCCCCceEEEEEecchhhcChHHHHH
Confidence 1111111 12348999999998876543210 03456677889999999999999999999
Q ss_pred HHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCccc
Q 004760 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (732)
Q Consensus 464 A~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~ 543 (732)
|+..+.++.++
T Consensus 210 ~~~~l~~~~~~--------------------------------------------------------------------- 220 (353)
T cd03811 210 AFALLRKEGPD--------------------------------------------------------------------- 220 (353)
T ss_pred HHHHhhhcCCC---------------------------------------------------------------------
Confidence 99999766443
Q ss_pred ccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHH
Q 004760 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA 623 (732)
Q Consensus 544 ~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysa 623 (732)
.+++++|.|+....++..+ +.+++.++|.|+|+.+++.++|+.
T Consensus 221 ----------------~~l~i~G~~~~~~~~~~~~---------------------~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 221 ----------------ARLVILGDGPLREELEALA---------------------KELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred ----------------ceEEEEcCCccHHHHHHHH---------------------HhcCCCccEEEecccCCHHHHHHh
Confidence 2567778876655555444 233777899999999999999999
Q ss_pred cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHH---HHHHHHHhcCHHHHHHH
Q 004760 624 ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVL---AQNLRYLLKNPSVRERM 700 (732)
Q Consensus 624 ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~L---a~aL~~LL~n~~~r~~m 700 (732)
||++++||. .|++|++++|||++|+|||+++.||..|+++++.+|+++++.+. +.+ ++++..+.++++.++++
T Consensus 264 ~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~ 339 (353)
T cd03811 264 ADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDE--AALAAAALALLDLLLDPELRERL 339 (353)
T ss_pred CCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCH--HHHHHHHHHHHhccCChHHHHHH
Confidence 999999998 89999999999999999999999999999999999999998887 788 78888888999999999
Q ss_pred HHHHHHHHHHhcC
Q 004760 701 AMEGRKKVERMYL 713 (732)
Q Consensus 701 ~~~~r~~v~~~ys 713 (732)
+.++++.+.++|+
T Consensus 340 ~~~~~~~~~~~~~ 352 (353)
T cd03811 340 AAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHHHhc
Confidence 9988888888776
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=265.25 Aligned_cols=331 Identities=24% Similarity=0.284 Sum_probs=239.1
Q ss_pred eEEEEeCCCC--CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch----------h----h
Q 004760 244 KFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS----------F----K 307 (732)
Q Consensus 244 kIllI~h~ls--~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~----------~----~ 307 (732)
|||+|++... .||++..+.+|+++|.+.||+|.+++...... .......++++........ + .
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPK-GRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLKK 79 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCc-chhhhccCceEEEeecccccccccccHHHHHHHHh
Confidence 6888887765 69999999999999999999999999654333 3333345555554332211 1 1
Q ss_pred hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh------HhHH-HhhhhhccccEEEEecHHhHHHhhhHH
Q 004760 308 TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------EYFD-RAKLVLDRVKLLVFLSESQTKQWLTWC 380 (732)
Q Consensus 308 ~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~------~~~~-~~~~~l~r~~~li~vS~~~~~~~~~~~ 380 (732)
...+||+||+++......+...+. ..+.+ .+++.|.... .++. ..+..+..++.++++|+..... .
T Consensus 80 ~~~~~Dii~~~~~~~~~~~~~~~~--~~~~~-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~----~ 152 (357)
T cd03795 80 LAKKADVIHLHFPNPLADLALLLL--PRKKP-VVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAET----S 152 (357)
T ss_pred cCCCCCEEEEecCcchHHHHHHHh--ccCce-EEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHH----H
Confidence 267999999987554332222211 12333 4444442211 1111 1223455688899998885331 1
Q ss_pred HhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHH
Q 004760 381 EEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLL 460 (732)
Q Consensus 381 ~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~ 460 (732)
......+ ..+.+||||+|...+.+..... . .......+.+.|+++|++.+.||++.
T Consensus 153 ----~~~~~~~-----------~~~~~i~~gi~~~~~~~~~~~~------~---~~~~~~~~~~~i~~~G~~~~~K~~~~ 208 (357)
T cd03795 153 ----PVLRRFR-----------DKVRVIPLGLDPARYPRPDALE------E---AIWRRAAGRPFFLFVGRLVYYKGLDV 208 (357)
T ss_pred ----HHhcCCc-----------cceEEecCCCChhhcCCcchhh------h---HhhcCCCCCcEEEEecccccccCHHH
Confidence 1111111 1248999999999886543210 1 22344567788999999999999999
Q ss_pred HHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCC
Q 004760 461 LVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPS 540 (732)
Q Consensus 461 LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~ 540 (732)
+++|+..+. +
T Consensus 209 li~a~~~l~----~------------------------------------------------------------------ 218 (357)
T cd03795 209 LLEAAAALP----D------------------------------------------------------------------ 218 (357)
T ss_pred HHHHHHhcc----C------------------------------------------------------------------
Confidence 999999773 2
Q ss_pred cccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHH
Q 004760 541 LFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVA 618 (732)
Q Consensus 541 lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~ 618 (732)
.+++++|+|+....++.++ +.+++.++|.|+|++ +++.
T Consensus 219 -------------------~~l~i~G~g~~~~~~~~~~---------------------~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 219 -------------------APLVIVGEGPLEAELEALA---------------------AALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred -------------------cEEEEEeCChhHHHHHHHH---------------------HhcCCcceEEEcCCCCHHHHH
Confidence 2567788886655444433 233778899999987 5699
Q ss_pred HHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc-CceEEEECCCCCcHHHHHHHHHHHhcCHHHH
Q 004760 619 SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH-NVTGLLHPPGHPGAQVLAQNLRYLLKNPSVR 697 (732)
Q Consensus 619 ~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~-g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r 697 (732)
.+|+.||++++||....|+||++++|||+||+|||+++.++..|++.+ +.+|++++++|. ++++++|..+++|++.+
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~--~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDP--AALAEAIRRLLEDPELR 336 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCH--HHHHHHHHHHHHCHHHH
Confidence 999999999999963369999999999999999999999999999886 899999998888 99999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHH
Q 004760 698 ERMAMEGRKKVERMYLKKHMY 718 (732)
Q Consensus 698 ~~m~~~~r~~v~~~ys~~~~~ 718 (732)
++|++++++.++++|+++.++
T Consensus 337 ~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 337 ERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHHhcchHhhC
Confidence 999999999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=266.74 Aligned_cols=314 Identities=18% Similarity=0.129 Sum_probs=221.7
Q ss_pred CeEEEEeCCC------CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEc--CCC-----c-----
Q 004760 243 RKFILIFHEL------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED--RGE-----P----- 304 (732)
Q Consensus 243 ~kIllI~h~l------s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~--~~~-----~----- 304 (732)
.||++|++.+ ..||+++.+.+|+.+|.+.||+|.+++....... ..+.......... ... .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTA-APLVPVVPEPLRLDAPGRDRAEAEALALA 79 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcc-cceeeccCCCcccccchhhHhhHHHHHHH
Confidence 3899999988 8999999999999999999999999996543211 1110000000000 000 0
Q ss_pred -hhhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhh
Q 004760 305 -SFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEE 383 (732)
Q Consensus 305 -~~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e 383 (732)
.+....+||+||+|+.....+ .....+ .++++++|.....+.............++++|+..... +
T Consensus 80 ~~~~~~~~~Divh~~~~~~~~~-----~~~~~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~--- 146 (335)
T cd03802 80 ERALAAGDFDIVHNHSLHLPLP-----FARPLP-VPVVTTLHGPPDPELLKLYYAARPDVPFVSISDAQRRP----W--- 146 (335)
T ss_pred HHHHhcCCCCEEEecCcccchh-----hhcccC-CCEEEEecCCCCcccchHHHhhCcCCeEEEecHHHHhh----c---
Confidence 033367999999987655433 222233 34677776543332222222334466788888876331 1
Q ss_pred hhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHH
Q 004760 384 KLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVE 463 (732)
Q Consensus 384 ~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLe 463 (732)
. .. ..+.+||||+|++.|.+.. ..+..++++|++.+.||++.+++
T Consensus 147 -~--~~-------------~~~~vi~ngvd~~~~~~~~-------------------~~~~~i~~~Gr~~~~Kg~~~li~ 191 (335)
T cd03802 147 -P--PL-------------PWVATVHNGIDLDDYPFRG-------------------PKGDYLLFLGRISPEKGPHLAIR 191 (335)
T ss_pred -c--cc-------------cccEEecCCcChhhCCCCC-------------------CCCCEEEEEEeeccccCHHHHHH
Confidence 0 00 1248999999999886522 23457899999999999999999
Q ss_pred HHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCccc
Q 004760 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (732)
Q Consensus 464 A~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~ 543 (732)
+++.. +
T Consensus 192 ~~~~~-----~--------------------------------------------------------------------- 197 (335)
T cd03802 192 AARRA-----G--------------------------------------------------------------------- 197 (335)
T ss_pred HHHhc-----C---------------------------------------------------------------------
Confidence 87532 1
Q ss_pred ccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHH
Q 004760 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLY 621 (732)
Q Consensus 544 ~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~ly 621 (732)
.+++++|.|+....+...+. .. ..+.++|.|+|+. +++..+|
T Consensus 198 ----------------~~l~i~G~~~~~~~~~~~~~-----------------~~---~~~~~~v~~~G~~~~~~~~~~~ 241 (335)
T cd03802 198 ----------------IPLKLAGPVSDPDYFYREIA-----------------PE---LLDGPDIEYLGEVGGAEKAELL 241 (335)
T ss_pred ----------------CeEEEEeCCCCHHHHHHHHH-----------------Hh---cccCCcEEEeCCCCHHHHHHHH
Confidence 24677787765444333321 11 0145789999986 5688999
Q ss_pred HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHH
Q 004760 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMA 701 (732)
Q Consensus 622 saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~ 701 (732)
+.||++|+||.+ .|+||++++||||||+|||++|.||..|+++++.+|+++++ + ++|+++|..+++.+ .
T Consensus 242 ~~~d~~v~ps~~-~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~--~~l~~~l~~l~~~~------~ 310 (335)
T cd03802 242 GNARALLFPILW-EEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--V--EELAAAVARADRLD------R 310 (335)
T ss_pred HhCcEEEeCCcc-cCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--H--HHHHHHHHHHhccH------H
Confidence 999999999973 69999999999999999999999999999999999999986 4 89999999986643 2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 702 MEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 702 ~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++++.+.++|+|+.++++|+++|+
T Consensus 311 ~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 311 AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4567778889999999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=261.73 Aligned_cols=345 Identities=21% Similarity=0.252 Sum_probs=240.3
Q ss_pred eEEEEeCCCC-CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHh-CCcEEEEcCCCch------hhhhcCccEE
Q 004760 244 KFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDRGEPS------FKTSMKADLV 315 (732)
Q Consensus 244 kIllI~h~ls-~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~-~gI~v~~~~~~~~------~~~~~k~DlV 315 (732)
||++|..... .||.+.++.+|+++|.+.||+|.+++............. .+........... +....+||+|
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 80 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVV 80 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEE
Confidence 6889988887 899999999999999999999999996654432211111 1122222111111 3347799999
Q ss_pred EeCCchh--hHHHHHHHHhh-cCCCccEEEEEeec-hh----HhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhc
Q 004760 316 IAGSAVC--ATWIDQYITRF-PAGGSQVVWWIMEN-RR----EYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKL 387 (732)
Q Consensus 316 ia~Sav~--~~~i~~~i~~~-~~~~~~ivw~i~e~-r~----~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l 387 (732)
|++.... .......+... .....++++++|.. .. ......+..+..++.++++|...... +. . .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~---~~----~-~ 152 (366)
T cd03822 81 VIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMSSELLRA---LL----L-R 152 (366)
T ss_pred EEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEeeHHHHHH---HH----h-h
Confidence 9875211 11111111111 11234467777664 11 11111234455688899997332111 11 1 0
Q ss_pred cCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHH
Q 004760 388 RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQL 467 (732)
Q Consensus 388 ~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~ 467 (732)
.. ...+.+||||++...+.+.... ++.....+.+.++++|++.+.||++.+++|+..
T Consensus 153 ~~------------~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~ 209 (366)
T cd03822 153 AY------------PEKIAVIPHGVPDPPAEPPESL-----------KALGGLDGRPVLLTFGLLRPYKGLELLLEALPL 209 (366)
T ss_pred cC------------CCcEEEeCCCCcCcccCCchhh-----------HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHH
Confidence 11 1234899999998877654321 234445677899999999999999999999999
Q ss_pred hHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCC
Q 004760 468 MIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGN 547 (732)
Q Consensus 468 l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~ 547 (732)
+.++.++
T Consensus 210 ~~~~~~~------------------------------------------------------------------------- 216 (366)
T cd03822 210 LVAKHPD------------------------------------------------------------------------- 216 (366)
T ss_pred HHhhCCC-------------------------------------------------------------------------
Confidence 9776554
Q ss_pred CCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc---hhhHHHHHHHc
Q 004760 548 TDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA---TTRVASLYSAA 624 (732)
Q Consensus 548 ~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~---~~dv~~lysaA 624 (732)
.+++++|.+......... ... .+.+.+++.++|.|+|. .+++..+|+.|
T Consensus 217 ------------~~l~i~G~~~~~~~~~~~---------------~~~-~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~a 268 (366)
T cd03822 217 ------------VRLLVAGETHPDLERYRG---------------EAY-ALAERLGLADRVIFINRYLPDEELPELFSAA 268 (366)
T ss_pred ------------eEEEEeccCccchhhhhh---------------hhH-hHHHhcCCCCcEEEecCcCCHHHHHHHHhhc
Confidence 245666766432211110 000 12233488889999986 47899999999
Q ss_pred CEEEEccCCCCC--CCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 625 DVYVINSQGLGE--TFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702 (732)
Q Consensus 625 Dv~V~pS~~~~E--gfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~ 702 (732)
|++++||. .| ++|.+++||||||+|||+++.|+ .+.+.++.+|++++++|. ++++++|..+++|++.+.+|++
T Consensus 269 d~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~--~~~~~~l~~l~~~~~~~~~~~~ 343 (366)
T cd03822 269 DVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDP--AALAEAIRRLLADPELAQALRA 343 (366)
T ss_pred CEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCH--HHHHHHHHHHHcChHHHHHHHH
Confidence 99999998 88 99999999999999999999999 777777789999999887 9999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 703 EGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 703 ~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++++.+++ |+|+.+++++.++|+
T Consensus 344 ~~~~~~~~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 344 RAREYARA-MSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHhh-CCHHHHHHHHHHHhC
Confidence 99999987 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=295.33 Aligned_cols=364 Identities=15% Similarity=0.175 Sum_probs=251.9
Q ss_pred CCeEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCCh-hHH--------------------------
Q 004760 242 SRKFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLM-PEL-------------------------- 290 (732)
Q Consensus 242 ~~kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~-~el-------------------------- 290 (732)
+.+|++|+-|. ..||-.-++-.|+++|++.||+|.||++.-. .+. ...
T Consensus 481 ~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~-~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~ 559 (977)
T PLN02939 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYD-CMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTG 559 (977)
T ss_pred CCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCc-ccChhhhhcccccceEEEEeecCceeEEEEEEE
Confidence 48999999998 4789999999999999999999999996432 221 100
Q ss_pred HhCCcEEEEcCC--C------------ch-------h-------hh--hcCccEEEeCCchhhHHHHHHHHhh---cCCC
Q 004760 291 ARRKIKVLEDRG--E------------PS-------F-------KT--SMKADLVIAGSAVCATWIDQYITRF---PAGG 337 (732)
Q Consensus 291 ~~~gI~v~~~~~--~------------~~-------~-------~~--~~k~DlVia~Sav~~~~i~~~i~~~---~~~~ 337 (732)
...||+++.... . .. | .. ..+|||||+|-..++...+.+...+ ....
T Consensus 560 ~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~ 639 (977)
T PLN02939 560 TVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNS 639 (977)
T ss_pred EECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCC
Confidence 013455553321 0 00 1 11 3699999998655543222222211 1122
Q ss_pred ccEEEEEeechh----------------HhH---HH-----------hhhhhccccEEEEecHHhHHHhhhHHHhhhh--
Q 004760 338 SQVVWWIMENRR----------------EYF---DR-----------AKLVLDRVKLLVFLSESQTKQWLTWCEEEKL-- 385 (732)
Q Consensus 338 ~~ivw~i~e~r~----------------~~~---~~-----------~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i-- 385 (732)
.+++..||.... .++ +. .+..+...+.++++|+..+....+ ....++
T Consensus 640 ~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~ 718 (977)
T PLN02939 640 ARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGRGLQD 718 (977)
T ss_pred CcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH-HhccchHH
Confidence 457777774310 001 00 111222478899999987543111 000000
Q ss_pred hccCCCccccccCCCccceEEeecCCCCCCCCCchhh-----------HHHhHHhHHHHHHHhCCCC---CCEEEEEEec
Q 004760 386 KLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKM-----------REKRNLLRDSVRKEMGLTD---QDMLVLSLSS 451 (732)
Q Consensus 386 ~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~-----------~ekr~~~r~~~R~~lgl~~---~~~lil~vGr 451 (732)
.++..+ . .+.+|+||+|+..|.|... -+.+...+..+|+++|++. +.++|++|||
T Consensus 719 ~L~~~~-------~----Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGR 787 (977)
T PLN02939 719 TLKFHS-------K----KFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITR 787 (977)
T ss_pred Hhcccc-------C----CceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeec
Confidence 011111 2 3489999999998887531 0111223467999999985 4589999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 452 INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 452 i~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
+.++||++.+++|+..+.+. +
T Consensus 788 L~~QKGiDlLleA~~~Ll~~--d--------------------------------------------------------- 808 (977)
T PLN02939 788 LVPQKGVHLIRHAIYKTAEL--G--------------------------------------------------------- 808 (977)
T ss_pred CCcccChHHHHHHHHHHhhc--C---------------------------------------------------------
Confidence 99999999999999877531 1
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~ 611 (732)
.+++++|+|++.. + ...++.+.+.++..++|.|+
T Consensus 809 ----------------------------vqLVIvGdGp~~~-~-----------------e~eL~~La~~l~l~drV~Fl 842 (977)
T PLN02939 809 ----------------------------GQFVLLGSSPVPH-I-----------------QREFEGIADQFQSNNNIRLI 842 (977)
T ss_pred ----------------------------CEEEEEeCCCcHH-H-----------------HHHHHHHHHHcCCCCeEEEE
Confidence 2577888886421 1 11123334455777899999
Q ss_pred cchhh--HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc---------CceEEEECCCCCcH
Q 004760 612 PATTR--VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH---------NVTGLLHPPGHPGA 680 (732)
Q Consensus 612 G~~~d--v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~---------g~~Gll~~~~d~~~ 680 (732)
|..++ ...+|++||+||+||+ +|+||++++|||+||+|+|++++||+.|+|.+ +.+|++++++|+
T Consensus 843 G~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~-- 918 (977)
T PLN02939 843 LKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDE-- 918 (977)
T ss_pred eccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCH--
Confidence 97754 4689999999999998 99999999999999999999999999999865 579999999888
Q ss_pred HHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 681 QVLAQNLRYLLK----NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 681 e~La~aL~~LL~----n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++|+++|.+++. |++.+++|++++. .+.|+|+.++++|.++|+.++.
T Consensus 919 eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 919 QGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHH
Confidence 999999988764 8999999988764 3579999999999999998875
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=278.69 Aligned_cols=323 Identities=13% Similarity=0.111 Sum_probs=216.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEE-------------------cCCCc
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE-------------------DRGEP 304 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~-------------------~~~~~ 304 (732)
|||+|.-.+++|||++.+++||+.|.+.||+|.++.+...++..+++. ..++... .....
T Consensus 2 kil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 2 NILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSH-QNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred eEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccccc-CCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 899999999999999999999999999999999999877666543321 2221111 00001
Q ss_pred h-------hhhhcCccEEEeCCchhh---H-HHHHHHH--hhcCCCccEEEEEeechhH---------------------
Q 004760 305 S-------FKTSMKADLVIAGSAVCA---T-WIDQYIT--RFPAGGSQVVWWIMENRRE--------------------- 350 (732)
Q Consensus 305 ~-------~~~~~k~DlVia~Sav~~---~-~i~~~i~--~~~~~~~~ivw~i~e~r~~--------------------- 350 (732)
+ +....+||+||.|..... . .+..+.. .......+++|..|.+-.-
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp 160 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCC
Confidence 1 224779999999965542 1 1112211 1223335699988742100
Q ss_pred ----h----HH-------Hhhhhh----ccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCC
Q 004760 351 ----Y----FD-------RAKLVL----DRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCS 411 (732)
Q Consensus 351 ----~----~~-------~~~~~l----~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpng 411 (732)
| ++ ..+..+ .....++..|+..... . .. .+.. . .+.+||||
T Consensus 161 ~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~----~----~~-~~~~-------~----~i~vI~NG 220 (405)
T PRK10125 161 TLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADA----F----NS-LYGP-------G----RCRIINNG 220 (405)
T ss_pred CccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHH----H----HH-HcCC-------C----CEEEeCCC
Confidence 1 01 111111 1234667777765331 1 11 1111 1 34899999
Q ss_pred CCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEec-C-CCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccc
Q 004760 412 LNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSS-I-NPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489 (732)
Q Consensus 412 vd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGr-i-~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~ 489 (732)
+|++.+.+..... ..+ .+.+..+|+++|+ + .++||++.+++|+..+. ++
T Consensus 221 id~~~~~~~~~~~-------~~~----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~--------------- 271 (405)
T PRK10125 221 IDMATEAILAELP-------PVR----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DK--------------- 271 (405)
T ss_pred cCccccccccccc-------ccc----cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CC---------------
Confidence 9975432211100 001 1345668899998 4 47899999999998651 11
Q ss_pred cccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch
Q 004760 490 KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK 569 (732)
Q Consensus 490 ~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~ 569 (732)
.+|+++|.|+
T Consensus 272 ----------------------------------------------------------------------~~L~ivG~g~ 281 (405)
T PRK10125 272 ----------------------------------------------------------------------IELHTFGKFS 281 (405)
T ss_pred ----------------------------------------------------------------------eEEEEEcCCC
Confidence 2567777764
Q ss_pred hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc---hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHH
Q 004760 570 QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA---TTRVASLYSAADVYVINSQGLGETFGRVTIEAM 646 (732)
Q Consensus 570 ~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~---~~dv~~lysaADv~V~pS~~~~Egfg~vilEAM 646 (732)
... .++|.++|. ..++.++|++||+||+||. .|+||++++|||
T Consensus 282 ~~~--------------------------------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAm 327 (405)
T PRK10125 282 PFT--------------------------------AGNVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEAL 327 (405)
T ss_pred ccc--------------------------------ccceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHH
Confidence 211 124566664 3678999999999999998 999999999999
Q ss_pred HcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHH----HHHHHHHHHHHhcCHHHHHHHHH
Q 004760 647 AFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRER----MAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 647 A~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~----m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
|||+|||+|++||++|++.++ +|++++++|+ ++||+.+ ++..+++ +..++++++.+.|+++.|+++|+
T Consensus 328 A~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~--~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~ 399 (405)
T PRK10125 328 SIGVPVIATHSDAAREVLQKS-GGKTVSEEEV--LQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYV 399 (405)
T ss_pred HcCCCEEEeCCCChHHhEeCC-cEEEECCCCH--HHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999875 9999999998 9999853 4444333 23568888888999999999999
Q ss_pred HHHHHh
Q 004760 723 QVIYKC 728 (732)
Q Consensus 723 ev~~~~ 728 (732)
++|+++
T Consensus 400 ~lY~~l 405 (405)
T PRK10125 400 NFYQNL 405 (405)
T ss_pred HHHHhC
Confidence 999863
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=261.12 Aligned_cols=332 Identities=21% Similarity=0.274 Sum_probs=237.7
Q ss_pred eEEEEeCCCC--CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEE--E----------cCCCch---h
Q 004760 244 KFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVL--E----------DRGEPS---F 306 (732)
Q Consensus 244 kIllI~h~ls--~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~--~----------~~~~~~---~ 306 (732)
||++|++... .||++..+.+||++|.+.||+|.+++......... . ...+.+. . ...... +
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEG-P-ARVVPVPSVPLPGYPEIRLALPPRRRVRRL 78 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccC-C-CCceeecccccCcccceEecccchhhHHHH
Confidence 5788886663 38999999999999999999999998543321100 0 0111110 0 001111 2
Q ss_pred hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHH-------------HhhhhhccccEEEEecHHhH
Q 004760 307 KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFD-------------RAKLVLDRVKLLVFLSESQT 373 (732)
Q Consensus 307 ~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~-------------~~~~~l~r~~~li~vS~~~~ 373 (732)
....+||+||+++.....+....+ ....+.+ +++++|.....+.. ..+......+.+++.|+...
T Consensus 79 ~~~~~pdii~~~~~~~~~~~~~~~-~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 79 LDAFAPDVVHIATPGPLGLAALRA-ARRLGIP-VVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HHhcCCCEEEEeccchhhHHHHHH-HHHcCCC-EEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 236799999998654433333222 2233344 55556543221111 11122344778888888753
Q ss_pred HHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC
Q 004760 374 KQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (732)
Q Consensus 374 ~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~ 453 (732)
.. . ..... ..+.++++|+|...|.+.... ...+++++ ..+.+.++++|++.
T Consensus 157 ~~----~----~~~~~-------------~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DE----L----RARGF-------------RRVRLWPRGVDTELFHPRRRD-------EALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred HH----H----hccCC-------------CceeecCCCccccccCccccc-------HHHHHHhC-CCCCeEEEEEeccc
Confidence 21 1 11111 124799999999988665321 22345555 45667899999999
Q ss_pred CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccc
Q 004760 454 PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533 (732)
Q Consensus 454 ~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 533 (732)
+.||++.+++++..+.++ ++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~----------------------------------------------------------- 227 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PP----------------------------------------------------------- 227 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CC-----------------------------------------------------------
Confidence 999999999999998765 43
Q ss_pred ccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc
Q 004760 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA 613 (732)
Q Consensus 534 ~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~ 613 (732)
.+++++|+|+....++ +..++|.|+|+
T Consensus 228 --------------------------~~l~i~G~~~~~~~~~---------------------------~~~~~v~~~g~ 254 (364)
T cd03814 228 --------------------------VRLVIVGDGPARARLE---------------------------ARYPNVHFLGF 254 (364)
T ss_pred --------------------------ceEEEEeCCchHHHHh---------------------------ccCCcEEEEec
Confidence 2567778776544333 23468999995
Q ss_pred --hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh
Q 004760 614 --TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL 691 (732)
Q Consensus 614 --~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL 691 (732)
.+++..+|+.||++++||. .|+||++++||||||+|||+++.++..|+++++.+|+++++.+. ++++++|..++
T Consensus 255 ~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~--~~l~~~i~~l~ 330 (364)
T cd03814 255 LDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDA--EAFAAALAALL 330 (364)
T ss_pred cCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCH--HHHHHHHHHHH
Confidence 5789999999999999998 99999999999999999999999999999999899999998887 89999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 692 KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 692 ~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
.|++.+++|++++++.+ +.|+|+.+++++.++|+
T Consensus 331 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 331 ADPELRRRMAARARAEA-ERRSWEAFLDNLLEAYR 364 (364)
T ss_pred cCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence 99999999999999998 56999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-29 Score=261.89 Aligned_cols=332 Identities=18% Similarity=0.203 Sum_probs=231.5
Q ss_pred eEEEEeCC-C--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch------------hhh
Q 004760 244 KFILIFHE-L--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS------------FKT 308 (732)
Q Consensus 244 kIllI~h~-l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~------------~~~ 308 (732)
||++|.-. . ..||++.++.+||.+|.+.||+|.|++..... ........|++++..+.... +..
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYP-KQKETEYNGVRLIHIPAPEIGGLGTIIYDILAILH 79 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCC-CCcccccCCceEEEcCCCCccchhhhHHHHHHHHH
Confidence 56677433 2 57999999999999999999999999954332 22244557899887665421 111
Q ss_pred h--cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech----------hHhHHHh-hhhhccccEEEEecHHhHHH
Q 004760 309 S--MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----------REYFDRA-KLVLDRVKLLVFLSESQTKQ 375 (732)
Q Consensus 309 ~--~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r----------~~~~~~~-~~~l~r~~~li~vS~~~~~~ 375 (732)
. .++|++++++..........+... .+ .++++++|... ..++... .......+.++++|+.....
T Consensus 80 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 157 (363)
T cd04955 80 ALFVKRDIDHVHALGPAIAPFLPLLRL-KG-KKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEY 157 (363)
T ss_pred HHhccCCeEEEEecCccHHHHHHHHHh-cC-CCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEEEeCCHHHHHH
Confidence 1 244444444322111111111211 23 34666665321 1111111 12334578899999887443
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPG 455 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~ 455 (732)
.. ...+.. . .+||||+|...+.+. ...++.++++++. .++++|++.+.
T Consensus 158 ----~~---~~~~~~----------~----~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~-~i~~~G~~~~~ 205 (363)
T cd04955 158 ----LK---EKYGRD----------S----TYIPYGADHVVSSEE----------DEILKKYGLEPGR-YYLLVGRIVPE 205 (363)
T ss_pred ----HH---HhcCCC----------C----eeeCCCcChhhcchh----------hhhHHhcCCCCCc-EEEEEeccccc
Confidence 10 111211 1 689999999877541 1234556766554 57799999999
Q ss_pred CCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccccc
Q 004760 456 KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535 (732)
Q Consensus 456 KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n 535 (732)
||++.+++|++.+.. +
T Consensus 206 Kg~~~li~a~~~l~~---~------------------------------------------------------------- 221 (363)
T cd04955 206 NNIDDLIEAFSKSNS---G------------------------------------------------------------- 221 (363)
T ss_pred CCHHHHHHHHHhhcc---C-------------------------------------------------------------
Confidence 999999999987732 1
Q ss_pred CCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch-
Q 004760 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT- 614 (732)
Q Consensus 536 ~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~- 614 (732)
.+++++|.|+....+...+ .+.++..++|+|+|+.
T Consensus 222 ------------------------~~l~ivG~~~~~~~~~~~~--------------------~~~~~~~~~V~~~g~~~ 257 (363)
T cd04955 222 ------------------------KKLVIVGNADHNTPYGKLL--------------------KEKAAADPRIIFVGPIY 257 (363)
T ss_pred ------------------------ceEEEEcCCCCcchHHHHH--------------------HHHhCCCCcEEEccccC
Confidence 2467778775443333222 2123667899999976
Q ss_pred -hhHHHHHHHcCEEEEccCCCC-CCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc
Q 004760 615 -TRVASLYSAADVYVINSQGLG-ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK 692 (732)
Q Consensus 615 -~dv~~lysaADv~V~pS~~~~-Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~ 692 (732)
+++..+|..||++++||. . |+||++++|||+||+|||+|+.|+..|++++ +|.++++++. ++++|..+++
T Consensus 258 ~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~----l~~~i~~l~~ 329 (363)
T cd04955 258 DQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD----LASLLEELEA 329 (363)
T ss_pred hHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH----HHHHHHHHHh
Confidence 678999999999999998 5 9999999999999999999999999999986 7888876652 9999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 693 NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 693 n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++.+.+|++++++.+.+.|+|+.++++++++|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 330 DPEEVSAMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999989999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-29 Score=296.27 Aligned_cols=367 Identities=16% Similarity=0.148 Sum_probs=245.4
Q ss_pred CCcHHHHHHHHHHHHHHCC--CEEEEEEeCCCCCC--------hhHH-------------HhCCcEEEEcCCCch-----
Q 004760 254 MTGAPLSMMELATELLSCG--ATVSAVVLSKRGGL--------MPEL-------------ARRKIKVLEDRGEPS----- 305 (732)
Q Consensus 254 ~gGA~~~~~eLA~~L~~~G--~~V~vv~l~~~g~l--------~~el-------------~~~gI~v~~~~~~~~----- 305 (732)
.||--+++++||++|+++| |+|.++|-....+- .+.+ ...|+.|+..++.+.
T Consensus 194 tGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~ 273 (1050)
T TIGR02468 194 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIP 273 (1050)
T ss_pred CCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEeccCCCCCCcC
Confidence 4678889999999999998 89999984322110 0011 124788776553221
Q ss_pred -----------------hhhh--------------cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeec-hh----
Q 004760 306 -----------------FKTS--------------MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMEN-RR---- 349 (732)
Q Consensus 306 -----------------~~~~--------------~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~-r~---- 349 (732)
+... ..||+||+|-+..+ +. +.+.....+.| .+...|.. +.
T Consensus 274 Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG-~a-a~~L~~~lgVP-~V~T~HSLgr~K~~~ 350 (1050)
T TIGR02468 274 KEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAG-DS-AALLSGALNVP-MVLTGHSLGRDKLEQ 350 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHH-HH-HHHHHHhhCCC-EEEECccchhhhhhh
Confidence 1111 14999999853322 11 22222333445 55555521 00
Q ss_pred -------------------HhHHHhhhhhccccEEEEecHHhHH-HhhhHHHhhhhhccCCCcc-------ccccCCC--
Q 004760 350 -------------------EYFDRAKLVLDRVKLLVFLSESQTK-QWLTWCEEEKLKLRSQPAV-------VPLSVND-- 400 (732)
Q Consensus 350 -------------------~~~~~~~~~l~r~~~li~vS~~~~~-~~~~~~~~e~i~l~~~~~~-------v~l~~n~-- 400 (732)
..+..-...+..++.+|+.|..... +|.. + -.+.|.+ +--++..
T Consensus 351 ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l-Y------~~~~~~~~~~~~~~~~~gv~~~g 423 (1050)
T TIGR02468 351 LLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGL-Y------DGFDVILERKLRARARRGVSCYG 423 (1050)
T ss_pred hcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH-h------ccCCchhhhhhhhhhcccccccc
Confidence 0011112345568899999877643 2111 1 0111100 0000000
Q ss_pred -ccceEEeecCCCCCCCCCchhhHHHhHH-------------hHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHH
Q 004760 401 -ELAFVAGFTCSLNTPTSSPEKMREKRNL-------------LRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQ 466 (732)
Q Consensus 401 -~~~~v~vIpngvd~~~f~~~~~~ekr~~-------------~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~ 466 (732)
....+.|||||+|+..|.|......+.. ....++. +..+.+.++|+++||+.+.||++.||+|+.
T Consensus 424 ~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r-~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~ 502 (1050)
T TIGR02468 424 RFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMR-FFTNPRKPMILALARPDPKKNITTLVKAFG 502 (1050)
T ss_pred cCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHh-hcccCCCcEEEEEcCCccccCHHHHHHHHH
Confidence 0125699999999999987532111100 1123333 344667789999999999999999999999
Q ss_pred HhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccC
Q 004760 467 LMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIG 546 (732)
Q Consensus 467 ~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~ 546 (732)
.+.+..+..
T Consensus 503 ~L~~l~~~~----------------------------------------------------------------------- 511 (1050)
T TIGR02468 503 ECRPLRELA----------------------------------------------------------------------- 511 (1050)
T ss_pred HhHhhccCC-----------------------------------------------------------------------
Confidence 886432210
Q ss_pred CCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc--hhhHHHHHHHc
Q 004760 547 NTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA--TTRVASLYSAA 624 (732)
Q Consensus 547 ~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~--~~dv~~lysaA 624 (732)
.. .+++|.|+....+..- ..++..++.. +.+.+++.++|.|+|+ .++++.+|+.|
T Consensus 512 ------------nL-~LIiG~gdd~d~l~~~---------~~~~l~~L~~-li~~lgL~g~V~FlG~v~~edvp~lYr~A 568 (1050)
T TIGR02468 512 ------------NL-TLIMGNRDDIDEMSSG---------SSSVLTSVLK-LIDKYDLYGQVAYPKHHKQSDVPDIYRLA 568 (1050)
T ss_pred ------------CE-EEEEecCchhhhhhcc---------chHHHHHHHH-HHHHhCCCCeEEecCCCCHHHHHHHHHHh
Confidence 01 1345665433222110 1234444444 3455699999999997 48999999988
Q ss_pred ----CEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHH
Q 004760 625 ----DVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 625 ----Dv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m 700 (732)
|+||+||. .|+||++++||||||+|||+|+.||+.|+|.++.+|+++++.|+ ++||++|..++.|++.+++|
T Consensus 569 d~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~--eaLA~AL~~LL~Dpelr~~m 644 (1050)
T TIGR02468 569 AKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQ--QAIADALLKLVADKQLWAEC 644 (1050)
T ss_pred hhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCH--HHHHHHHHHHhhCHHHHHHH
Confidence 69999997 99999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 701 AMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 701 ~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++++++.++ .|+|+.++++|++.+..|..
T Consensus 645 ~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 645 RQNGLKNIH-LFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred HHHHHHHHH-HCCHHHHHHHHHHHHHHHhc
Confidence 999999986 59999999999999998864
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=251.65 Aligned_cols=342 Identities=25% Similarity=0.364 Sum_probs=249.8
Q ss_pred eEEEEeCCCCC--CcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEc---CC-C---ch---------
Q 004760 244 KFILIFHELSM--TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED---RG-E---PS--------- 305 (732)
Q Consensus 244 kIllI~h~ls~--gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~---~~-~---~~--------- 305 (732)
||++|++.... ||+...+.+|+++|.+.||+|.+++............ ........ .. . ..
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV-GGIVVVRPPPLLRVRRLLLLLLLALRLRR 79 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee-cCcceecCCcccccchhHHHHHHHHHHHH
Confidence 68888888753 8999999999999999999999999654433221111 11111100 00 0 00
Q ss_pred hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH------------hHHHhhhhhccccEEEEecHHhH
Q 004760 306 FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE------------YFDRAKLVLDRVKLLVFLSESQT 373 (732)
Q Consensus 306 ~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~------------~~~~~~~~l~r~~~li~vS~~~~ 373 (732)
+....+||+|++++........ ......+ .++++++|..... +.......+...+.+++.|+...
T Consensus 80 ~~~~~~~Dii~~~~~~~~~~~~--~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERFDVVHAHDWLALLAAA--LAARLLG-IPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCCcEEEEechhHHHHHH--HHHHhcC-CcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 2336799999998755443332 1222223 3466666543221 11122344555889999998864
Q ss_pred HHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC
Q 004760 374 KQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (732)
Q Consensus 374 ~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~ 453 (732)
.. . .+....+ ...+.++|||++...+.+.. ...+.......+.+.|+++|++.
T Consensus 157 ~~----~----~~~~~~~----------~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~ 209 (374)
T cd03801 157 EE----L----RELGGVP----------PEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLV 209 (374)
T ss_pred HH----H----HhcCCCC----------CCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchh
Confidence 43 1 1111110 12458999999998886543 12234455566778999999999
Q ss_pred CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccc
Q 004760 454 PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533 (732)
Q Consensus 454 ~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 533 (732)
+.||.+.+++|+..+.++.++
T Consensus 210 ~~k~~~~~i~~~~~~~~~~~~----------------------------------------------------------- 230 (374)
T cd03801 210 PRKGVDLLLEALAKLRKEYPD----------------------------------------------------------- 230 (374)
T ss_pred hhcCHHHHHHHHHHHhhhcCC-----------------------------------------------------------
Confidence 999999999999998766544
Q ss_pred ccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc
Q 004760 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA 613 (732)
Q Consensus 534 ~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~ 613 (732)
.+++++|.++....++.++ +.++..++|.|+|+
T Consensus 231 --------------------------~~l~i~G~~~~~~~~~~~~---------------------~~~~~~~~v~~~g~ 263 (374)
T cd03801 231 --------------------------VRLVIVGDGPLREELEALA---------------------AELGLGDRVTFLGF 263 (374)
T ss_pred --------------------------eEEEEEeCcHHHHHHHHHH---------------------HHhCCCcceEEEec
Confidence 3567777766555555443 22367789999998
Q ss_pred h--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh
Q 004760 614 T--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL 691 (732)
Q Consensus 614 ~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL 691 (732)
. +++..+|+.||++++|+. .|++|++++|||++|+|||+++.++..|+++++.+|+++++.|+ ++++++|.+++
T Consensus 264 ~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~--~~l~~~i~~~~ 339 (374)
T cd03801 264 VPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDP--EALAEAILRLL 339 (374)
T ss_pred cChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCH--HHHHHHHHHHH
Confidence 8 899999999999999998 79999999999999999999999999999998899999999887 99999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 692 KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 692 ~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
.+++.+++|++++++.+.+.|+|+.+++++.++|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 340 DDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 99999999999999889899999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=280.62 Aligned_cols=357 Identities=14% Similarity=0.157 Sum_probs=243.2
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH--------------------------HHhC
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE--------------------------LARR 293 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e--------------------------l~~~ 293 (732)
||++|+.|. ..||...++-.|+++|++.||+|.|+++.-.. .... ....
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGR-ILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVD 79 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc-hhhHhccCeEEEEEEeeccCCceeEEEEEEEEeC
Confidence 689999886 46999999999999999999999999954322 2111 0124
Q ss_pred CcEEEEcCCCch------------------------------hhh--hcCccEEEeCCchhhHHHHHHHHhhc----CCC
Q 004760 294 KIKVLEDRGEPS------------------------------FKT--SMKADLVIAGSAVCATWIDQYITRFP----AGG 337 (732)
Q Consensus 294 gI~v~~~~~~~~------------------------------~~~--~~k~DlVia~Sav~~~~i~~~i~~~~----~~~ 337 (732)
|++++..+.... +.. ..+||+||+|...+ ..+..++.... ...
T Consensus 80 gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t-~~~~~~l~~~~~~~~~~~ 158 (476)
T cd03791 80 GVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHT-GLVPALLKEKYADPFFKN 158 (476)
T ss_pred CceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHH-HHHHHHHHHhhccccCCC
Confidence 677765433220 111 37999999997543 23333443332 123
Q ss_pred ccEEEEEeechh------HhH----------------------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccC
Q 004760 338 SQVVWWIMENRR------EYF----------------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRS 389 (732)
Q Consensus 338 ~~ivw~i~e~r~------~~~----------------------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~ 389 (732)
.++++.+|.... ..+ ...+..+...+.++++|+...+. .....-..+.
T Consensus 159 ~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~----i~~~~~~~gl 234 (476)
T cd03791 159 IKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYARE----ILTPEFGEGL 234 (476)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHH----hCCCCCCcch
Confidence 558888875311 000 01122344578888888875332 1000000000
Q ss_pred CCccccccCCCccceEEeecCCCCCCCCCchhhHH-----------HhHHhHHHHHHHhCCC--CCCEEEEEEecCCCCC
Q 004760 390 QPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMRE-----------KRNLLRDSVRKEMGLT--DQDMLVLSLSSINPGK 456 (732)
Q Consensus 390 ~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~e-----------kr~~~r~~~R~~lgl~--~~~~lil~vGri~~~K 456 (732)
.. +.+ .....+.+|+||+|.+.|.|..... .+...+..+++++|++ ++.++|+++||+.+.|
T Consensus 235 ~~-~~~----~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~K 309 (476)
T cd03791 235 DG-LLR----ARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQK 309 (476)
T ss_pred HH-HHH----hccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccc
Confidence 00 000 0012458999999999988753211 1122456789999995 6788999999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccC
Q 004760 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (732)
Q Consensus 457 G~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~ 536 (732)
|++.+++|+..+.++.
T Consensus 310 g~~~li~a~~~l~~~~---------------------------------------------------------------- 325 (476)
T cd03791 310 GIDLLLEALPELLELG---------------------------------------------------------------- 325 (476)
T ss_pred cHHHHHHHHHHHHHcC----------------------------------------------------------------
Confidence 9999999999886432
Q ss_pred CCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc-cch-
Q 004760 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT-PAT- 614 (732)
Q Consensus 537 ~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~-G~~- 614 (732)
.+++++|.|+.. ++ +.+ +.+.+.+ .+++.+. ++.
T Consensus 326 -----------------------~~lvi~G~g~~~--~~----------------~~~-~~~~~~~--~~~v~~~~~~~~ 361 (476)
T cd03791 326 -----------------------GQLVILGSGDPE--YE----------------EAL-RELAARY--PGRVAVLIGYDE 361 (476)
T ss_pred -----------------------cEEEEEecCCHH--HH----------------HHH-HHHHHhC--CCcEEEEEeCCH
Confidence 246777877421 11 111 1222221 4566654 554
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCc------eEEEECCCCCcHHHHHHHHH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNV------TGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~------~Gll~~~~d~~~e~La~aL~ 688 (732)
+.+..+|++||++++||. .|+||++++|||+||+|||+++.||+.|+|.++. +|+++++.|+ ++|+++|.
T Consensus 362 ~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~--~~l~~~i~ 437 (476)
T cd03791 362 ALAHLIYAGADFFLMPSR--FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNA--DALLAALR 437 (476)
T ss_pred HHHHHHHHhCCEEECCCC--CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCH--HHHHHHHH
Confidence 456789999999999998 9999999999999999999999999999999887 9999999988 99999999
Q ss_pred HHhc---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 689 YLLK---NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 689 ~LL~---n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++++ +++.+.+|++++.+ ..|+|+.++++|.++|+
T Consensus 438 ~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 438 RALALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 8875 67777777777654 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=256.63 Aligned_cols=339 Identities=23% Similarity=0.281 Sum_probs=245.8
Q ss_pred eEEEEeCCCCC--CcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH------HHhCCcEEEEcCCCch----------
Q 004760 244 KFILIFHELSM--TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE------LARRKIKVLEDRGEPS---------- 305 (732)
Q Consensus 244 kIllI~h~ls~--gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e------l~~~gI~v~~~~~~~~---------- 305 (732)
||++|++.... ||++..+.++|++|.++||+|.+++.......... ....+++++.......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRLL 80 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHHHH
Confidence 68999998866 89999999999999999999999995543332211 1235666654432211
Q ss_pred -----------hh--hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH----------------hHH-Hh
Q 004760 306 -----------FK--TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE----------------YFD-RA 355 (732)
Q Consensus 306 -----------~~--~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~----------------~~~-~~ 355 (732)
.. ...+||+||+++......+.........+. ++++++|..... +.. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~-~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (394)
T cd03794 81 NYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGA-PFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLE 159 (394)
T ss_pred hhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCC-CEEEEehhhcchhHHHccCccccchHHHHHHHHH
Confidence 11 267899999997322222323222222233 466666532110 111 12
Q ss_pred hhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHH
Q 004760 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRK 435 (732)
Q Consensus 356 ~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~ 435 (732)
+..+...+.++++|+..... +. ..+.. ...+.++|||++...+.+..... . +.
T Consensus 160 ~~~~~~~d~vi~~s~~~~~~----~~----~~~~~-----------~~~~~~i~~~~~~~~~~~~~~~~-------~-~~ 212 (394)
T cd03794 160 RLIYRRADAIVVISPGMREY----LV----RRGVP-----------PEKISVIPNGVDLELFKPPPADE-------S-LR 212 (394)
T ss_pred HHHHhcCCEEEEECHHHHHH----HH----hcCCC-----------cCceEEcCCCCCHHHcCCccchh-------h-hh
Confidence 23445688999999886442 21 11211 12358999999988776544311 1 34
Q ss_pred HhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcc
Q 004760 436 EMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSS 515 (732)
Q Consensus 436 ~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~ 515 (732)
......+.+.|+++|++.+.||++.+++|+..+.+. ++
T Consensus 213 ~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~----------------------------------------- 250 (394)
T cd03794 213 KELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PD----------------------------------------- 250 (394)
T ss_pred hccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CC-----------------------------------------
Confidence 455566778999999999999999999999988655 33
Q ss_pred cccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHH
Q 004760 516 NELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEIL 595 (732)
Q Consensus 516 ~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il 595 (732)
.+++++|.|+....++.++..
T Consensus 251 --------------------------------------------~~l~i~G~~~~~~~~~~~~~~--------------- 271 (394)
T cd03794 251 --------------------------------------------IRFLIVGDGPEKEELKELAKA--------------- 271 (394)
T ss_pred --------------------------------------------eEEEEeCCcccHHHHHHHHHH---------------
Confidence 357778888766555544321
Q ss_pred HHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCC-----cHHHHHHHHcCCCEEEcCCCChhhhhccCc
Q 004760 596 EFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETF-----GRVTIEAMAFGVPVLGTDAGGTKEIVEHNV 668 (732)
Q Consensus 596 ~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egf-----g~vilEAMA~GlPVI~td~gG~~EiVe~g~ 668 (732)
.++ ++|.|+|.. +++..+|+.||++++||. .|++ |++++|||+||+|||+++.++..+++.++.
T Consensus 272 ------~~~-~~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~ 342 (394)
T cd03794 272 ------LGL-DNVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAG 342 (394)
T ss_pred ------cCC-CcEEEeCCCChHHHHHHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCC
Confidence 133 579999966 689999999999999998 6654 889999999999999999999999999888
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 669 TGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 669 ~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
+|++++++|. ++++++|.+++.|++.+++|++++++.+.+.|+|+.++++|+
T Consensus 343 ~g~~~~~~~~--~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 343 AGLVVPPGDP--EALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred cceEeCCCCH--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999887 999999999999999999999999999998999999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-29 Score=260.25 Aligned_cols=331 Identities=24% Similarity=0.314 Sum_probs=238.6
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCCh--hHHHhCCcEEEEcCCCch-------hh---hhcC
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLM--PELARRKIKVLEDRGEPS-------FK---TSMK 311 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~--~el~~~gI~v~~~~~~~~-------~~---~~~k 311 (732)
||+++++.+..+ ++..+.+++..|.++||+|.++++....... ......+..+........ +. ...+
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 688888887544 8999999999999999999999976543211 111111111110000000 11 2579
Q ss_pred ccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech--h-HhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhc-
Q 004760 312 ADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--R-EYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKL- 387 (732)
Q Consensus 312 ~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r--~-~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l- 387 (732)
+|+||+++........ .+.+...+.+ .++.+|... . ......+..+...+.+++.|+..... + .+.
T Consensus 80 ~Dii~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~----l----~~~~ 149 (355)
T cd03799 80 IDHIHAHFGTTPATVA-MLASRLGGIP-YSFTAHGKDIFRSPDAIDLDEKLARADFVVAISEYNRQQ----L----IRLL 149 (355)
T ss_pred CCEEEECCCCchHHHH-HHHHHhcCCC-EEEEEecccccccCchHHHHHHHhhCCEEEECCHHHHHH----H----HHhc
Confidence 9999998765433332 2333333333 444443211 1 11012334556688899999986442 2 111
Q ss_pred cCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHH
Q 004760 388 RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQL 467 (732)
Q Consensus 388 ~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~ 467 (732)
+... ..+.+||||+|.+.+.+... ....+.+.|+++|++.+.||++.+++++..
T Consensus 150 ~~~~-----------~~~~vi~~~~d~~~~~~~~~---------------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 150 GCDP-----------DKIHVVHCGVDLERFPPRPP---------------PPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred CCCc-----------ccEEEEeCCcCHHHcCCccc---------------cccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1111 23589999999887765430 123456789999999999999999999999
Q ss_pred hHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCC
Q 004760 468 MIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGN 547 (732)
Q Consensus 468 l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~ 547 (732)
+.++.++
T Consensus 204 l~~~~~~------------------------------------------------------------------------- 210 (355)
T cd03799 204 LKDRGID------------------------------------------------------------------------- 210 (355)
T ss_pred HhhcCCC-------------------------------------------------------------------------
Confidence 8765443
Q ss_pred CCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcC
Q 004760 548 TDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAAD 625 (732)
Q Consensus 548 ~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaAD 625 (732)
.++.++|.|+....++..+. .+++.++|.|+|+. +++..+|+.||
T Consensus 211 ------------~~l~i~G~~~~~~~~~~~~~---------------------~~~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 211 ------------FRLDIVGDGPLRDELEALIA---------------------ELGLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred ------------eEEEEEECCccHHHHHHHHH---------------------HcCCCCeEEECCcCChHHHHHHHHhCC
Confidence 35677788876665555443 23677899999987 78999999999
Q ss_pred EEEEccCCCC------CCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHH
Q 004760 626 VYVINSQGLG------ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRER 699 (732)
Q Consensus 626 v~V~pS~~~~------Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~ 699 (732)
++++||. . |+||++++|||+||+|||+++.++..|+++++.+|++++++|. ++++++|..++++++.+.+
T Consensus 258 i~l~~s~--~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~--~~l~~~i~~~~~~~~~~~~ 333 (355)
T cd03799 258 LFVLPSV--TAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDP--EALADAIERLLDDPELRRE 333 (355)
T ss_pred EEEecce--ecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCH--HHHHHHHHHHHhCHHHHHH
Confidence 9999998 6 9999999999999999999999999999999889999998887 9999999999999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHH
Q 004760 700 MAMEGRKKVERMYLKKHMYKKL 721 (732)
Q Consensus 700 m~~~~r~~v~~~ys~~~~~~~~ 721 (732)
|++++++.+++.|+|+.+++++
T Consensus 334 ~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 334 MGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHhcCHHHHhhcC
Confidence 9999999999999999998753
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-28 Score=250.90 Aligned_cols=338 Identities=22% Similarity=0.331 Sum_probs=242.3
Q ss_pred eEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEc--CCCc-------------hh
Q 004760 244 KFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED--RGEP-------------SF 306 (732)
Q Consensus 244 kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~--~~~~-------------~~ 306 (732)
||+++++.. ..||++..+.++|++|.+.||+|.+++.......... ...++..... .... ..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEE-EVVVVRPFRVPTFKYPDFRLPLPIPRALIII 79 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccc-ccccccccccccchhhhhhccccHHHHHHHH
Confidence 688888776 5789999999999999999999999995543322111 1111111110 0000 02
Q ss_pred hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhH----------------HHhhhhhccccEEEEecH
Q 004760 307 KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYF----------------DRAKLVLDRVKLLVFLSE 370 (732)
Q Consensus 307 ~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~----------------~~~~~~l~r~~~li~vS~ 370 (732)
....+||+|++++.....+....+. ...+.+ +++++|..-..+. ...+..+..++.+++.|+
T Consensus 80 ~~~~~~Div~~~~~~~~~~~~~~~~-~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 80 LKELGPDIVHTHTPFSLGLLGLRVA-RKLGIP-VVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred HhhcCCCEEEECCchhhhhHHHHHH-HHcCCC-EEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 3467999999987644333222222 222333 5555553222111 111233445788888888
Q ss_pred HhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEe
Q 004760 371 SQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLS 450 (732)
Q Consensus 371 ~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vG 450 (732)
..... + ...+.. ..+.++|||+|...+.+... ...++.++++.+.+.|+++|
T Consensus 158 ~~~~~----~----~~~~~~------------~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G 209 (374)
T cd03817 158 KIADL----L----REYGVK------------RPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLLYVG 209 (374)
T ss_pred HHHHH----H----HhcCCC------------CceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEEEEe
Confidence 75332 2 111211 12589999999988876543 22367778888888999999
Q ss_pred cCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCC
Q 004760 451 SINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (732)
Q Consensus 451 ri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (732)
++.+.||++.+++++..+.++.++
T Consensus 210 ~~~~~k~~~~l~~~~~~~~~~~~~-------------------------------------------------------- 233 (374)
T cd03817 210 RLAKEKNIDFLIRAFARLLKEEPD-------------------------------------------------------- 233 (374)
T ss_pred eeecccCHHHHHHHHHHHHHhCCC--------------------------------------------------------
Confidence 999999999999999998766443
Q ss_pred cccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEE
Q 004760 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610 (732)
Q Consensus 531 P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f 610 (732)
.+++++|+|+....++.++ +.+++.++|.|
T Consensus 234 -----------------------------~~l~i~G~~~~~~~~~~~~---------------------~~~~~~~~v~~ 263 (374)
T cd03817 234 -----------------------------VKLVIVGDGPEREELEELA---------------------RELGLADRVIF 263 (374)
T ss_pred -----------------------------eEEEEEeCCchHHHHHHHH---------------------HHcCCCCcEEE
Confidence 3577788876655554444 22377789999
Q ss_pred ccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHH
Q 004760 611 TPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 611 ~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~ 688 (732)
+|+. +++..+|+.||++++||. .|++|++++|||+||+|||+++.++..|+++++.+|+++++.+. +++++|.
T Consensus 264 ~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~---~~~~~i~ 338 (374)
T cd03817 264 TGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE---ALAEALL 338 (374)
T ss_pred eccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH---HHHHHHH
Confidence 9976 789999999999999998 99999999999999999999999999999999999999987763 8999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 689 ~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
.++++++.+++|++++++.+++.+ +.+++.++|++
T Consensus 339 ~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 373 (374)
T cd03817 339 RLLQDPELRRRLSKNAEESAEKFS----FAKKVEKLYEE 373 (374)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHH----HHHHHHHHHhc
Confidence 999999999999999999998744 66777777664
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-28 Score=283.64 Aligned_cols=412 Identities=16% Similarity=0.188 Sum_probs=256.4
Q ss_pred CCcchhhhcccCc-----ccccccccccchhhhhccCCeEEEEeCCCC-----------CCcHHHHHHHHHHH-------
Q 004760 211 FGLTEDRILEWSP-----EKRSGTCDRKGDFARFVWSRKFILIFHELS-----------MTGAPLSMMELATE------- 267 (732)
Q Consensus 211 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~kIllI~h~ls-----------~gGA~~~~~eLA~~------- 267 (732)
+|.+-.|++|.=- -+....|.=..=+.|.=|..+|++|+-..+ .||--+++.+||++
T Consensus 219 wg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~ 298 (784)
T TIGR02470 219 WGDTAQRVLETLHLLDDLLEAPDPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQ 298 (784)
T ss_pred cCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 5666666655321 111223333444566677899999887763 47778899999997
Q ss_pred -HHHCCC----EEEEEEeCCCC--C--ChhHHH----hCCcEEEEcCCCc----------h------------------h
Q 004760 268 -LLSCGA----TVSAVVLSKRG--G--LMPELA----RRKIKVLEDRGEP----------S------------------F 306 (732)
Q Consensus 268 -L~~~G~----~V~vv~l~~~g--~--l~~el~----~~gI~v~~~~~~~----------~------------------~ 306 (732)
|+++|| +|.|+|-.... + ..+.++ ..++.|+..++.. + +
T Consensus 299 ~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~ 378 (784)
T TIGR02470 299 RIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEI 378 (784)
T ss_pred HHHhcCCCccceEEEEecCCCCccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 568999 66687732221 1 111111 2466666544222 1 1
Q ss_pred hh--hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEe-----------------echhHhHHH---hhhhhccccE
Q 004760 307 KT--SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIM-----------------ENRREYFDR---AKLVLDRVKL 364 (732)
Q Consensus 307 ~~--~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~-----------------e~r~~~~~~---~~~~l~r~~~ 364 (732)
.. ..+||+||+|-...+ +. +.+.....+.+.+. ..| +.+..+..+ -...++.++.
T Consensus 379 ~~~~~~~pDlIHahy~d~g-lv-a~lla~~lgVP~v~-t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~ 455 (784)
T TIGR02470 379 LAELQGKPDLIIGNYSDGN-LV-ASLLARKLGVTQCT-IAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADF 455 (784)
T ss_pred HHhcCCCCCEEEECCCchH-HH-HHHHHHhcCCCEEE-ECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCE
Confidence 11 247999999853221 11 22223333444322 122 111111111 1234555888
Q ss_pred EEEecHHhHHHhhhH---HHhhhhhccCCCccccc--cCCCccceEEeecCCCCCCCCCchhhHHHhH--H---------
Q 004760 365 LVFLSESQTKQWLTW---CEEEKLKLRSQPAVVPL--SVNDELAFVAGFTCSLNTPTSSPEKMREKRN--L--------- 428 (732)
Q Consensus 365 li~vS~~~~~~~~~~---~~~e~i~l~~~~~~v~l--~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~--~--------- 428 (732)
+++.+......-... +++. ..+.. |.+..+ |.+.....+.+||+|+|...|.|....+++. +
T Consensus 456 IItsT~qEi~~~~~~v~qY~s~-~~ft~-p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~ 533 (784)
T TIGR02470 456 IITSTYQEIAGTKDSVGQYESH-QAFTM-PGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLF 533 (784)
T ss_pred EEECcHHHhhhhhhhhhhhhhc-ccccc-cceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhcc
Confidence 998886431100000 1000 00010 111111 1111123568999999999887754432211 0
Q ss_pred hHHHHHHHhCC--CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccccccc
Q 004760 429 LRDSVRKEMGL--TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQ 506 (732)
Q Consensus 429 ~r~~~R~~lgl--~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~ 506 (732)
.+...++.+|+ +.+.++|+++||+.+.||++.|++|+..+....+.
T Consensus 534 ~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~-------------------------------- 581 (784)
T TIGR02470 534 SLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLREL-------------------------------- 581 (784)
T ss_pred chhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCC--------------------------------
Confidence 01233567786 45678999999999999999999999876432211
Q ss_pred ccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCC
Q 004760 507 MSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSN 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~ 586 (732)
.+|+++|.+.....- ...+
T Consensus 582 -----------------------------------------------------~~LVIVGGg~~~~~s--------~d~e 600 (784)
T TIGR02470 582 -----------------------------------------------------VNLVVVAGKLDAKES--------KDRE 600 (784)
T ss_pred -----------------------------------------------------eEEEEEeCCcccccc--------cchh
Confidence 246666765321000 0000
Q ss_pred ChhhHHHHHHHHHhcCCCCCcEEEccch---hhHHHHHH----HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 587 KVPYVKEILEFLSQHSNLSKAMLWTPAT---TRVASLYS----AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 587 ~~~y~k~il~~l~~~l~l~~~V~f~G~~---~dv~~lys----aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
+..+++++.+. .+.+++.++|.|+|++ .+..++|+ ++|+||+||. +|+||++++||||||+|||+|+.||
T Consensus 601 e~~~i~~L~~l-a~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG 677 (784)
T TIGR02470 601 EQAEIEKMHNL-IDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGG 677 (784)
T ss_pred HHHHHHHHHHH-HHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 11233444443 3455999999999974 35555654 3579999997 9999999999999999999999999
Q ss_pred hhhhhccCceEEEECCCCCcHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 660 TKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL----KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 660 ~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL----~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
+.|+|.++.+|+++++.|+ ++++++|..++ .|++.+++|+++|++.+.++|+|+.++++++++.
T Consensus 678 ~~EiV~dg~tGfLVdp~D~--eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 678 PLEIIQDGVSGFHIDPYHG--EEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHhcCCCcEEEeCCCCH--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999998 99999999875 6999999999999999999999999999998875
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-28 Score=250.34 Aligned_cols=327 Identities=18% Similarity=0.194 Sum_probs=230.0
Q ss_pred eEEEEeCCCC---CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcC-----C-------------
Q 004760 244 KFILIFHELS---MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-----G------------- 302 (732)
Q Consensus 244 kIllI~h~ls---~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~-----~------------- 302 (732)
||++|+|... .||++..+.+||++|.+.||+|.+++...... ..........+.... .
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPP-RQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDY 79 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCC-CcccccccceeeccccccccCCCchhhhhHHHhc
Confidence 6889988874 47999999999999999999999999544322 222222222222210 0
Q ss_pred -C----c---hhhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHH
Q 004760 303 -E----P---SFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTK 374 (732)
Q Consensus 303 -~----~---~~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~ 374 (732)
. . .+....+||+||+++........ +......+. +++..+|...... ..........+.++++|+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~-~~~~~~~~~-~~i~~~hd~~~~~-~~~~~~~~~~d~ii~~s~~~~~ 156 (359)
T cd03823 80 DNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSI-LRAARDRGI-PIVLTLHDYWLIC-PRQGLFKKGGDAVIAPSRFLLD 156 (359)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCccchHHHH-HHHHHhcCC-CEEEEEeeeeeec-chhhhhccCCCEEEEeCHHHHH
Confidence 0 0 02336799999998753222111 111122233 3555554321100 0111112224778999987644
Q ss_pred HhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCC
Q 004760 375 QWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINP 454 (732)
Q Consensus 375 ~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~ 454 (732)
. + ...+..+ ..+.+||||+|.+.+.+... +.+++.+.|+++|++.+
T Consensus 157 ~----~----~~~~~~~-----------~~~~vi~n~~~~~~~~~~~~---------------~~~~~~~~i~~~G~~~~ 202 (359)
T cd03823 157 R----Y----VANGLFA-----------EKISVIRNGIDLDRAKRPRR---------------APPGGRLRFGFIGQLTP 202 (359)
T ss_pred H----H----HHcCCCc-----------cceEEecCCcChhhcccccc---------------CCCCCceEEEEEecCcc
Confidence 2 2 1111111 23589999999988754321 23466788999999999
Q ss_pred CCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccc
Q 004760 455 GKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRK 534 (732)
Q Consensus 455 ~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 534 (732)
.||++.+++++..+.+ ++
T Consensus 203 ~k~~~~li~~~~~l~~--~~------------------------------------------------------------ 220 (359)
T cd03823 203 HKGVDLLLEAFKRLPR--GD------------------------------------------------------------ 220 (359)
T ss_pred ccCHHHHHHHHHHHHh--cC------------------------------------------------------------
Confidence 9999999999998865 33
Q ss_pred cCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch
Q 004760 535 NLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT 614 (732)
Q Consensus 535 n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~ 614 (732)
.+++++|.++......... +..++|.++|+.
T Consensus 221 -------------------------~~l~i~G~~~~~~~~~~~~------------------------~~~~~v~~~g~~ 251 (359)
T cd03823 221 -------------------------IELVIVGNGLELEEESYEL------------------------EGDPRVEFLGAY 251 (359)
T ss_pred -------------------------cEEEEEcCchhhhHHHHhh------------------------cCCCeEEEeCCC
Confidence 2466677765443332211 345789999987
Q ss_pred --hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc
Q 004760 615 --TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK 692 (732)
Q Consensus 615 --~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~ 692 (732)
+++.++|+.||++++||.. .|++|++++|||+||+|||+|+.++..|++.++.+|++++++|. ++++++|..+++
T Consensus 252 ~~~~~~~~~~~ad~~i~ps~~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~--~~l~~~i~~l~~ 328 (359)
T cd03823 252 PQEEIDDFYAEIDVLVVPSIW-PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDA--EDLAAALERLID 328 (359)
T ss_pred CHHHHHHHHHhCCEEEEcCcc-cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCH--HHHHHHHHHHHh
Confidence 8999999999999999973 79999999999999999999999999999999889999999887 999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 693 NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 693 n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
|++.++.|++++++.... +.+++++.++|+
T Consensus 329 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 358 (359)
T cd03823 329 DPDLLERLRAGIEPPRSI----EDQAEEYLKLYR 358 (359)
T ss_pred ChHHHHHHHHhHHHhhhH----HHHHHHHHHHhh
Confidence 999999999998876643 899999999885
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-28 Score=273.52 Aligned_cols=362 Identities=16% Similarity=0.180 Sum_probs=246.3
Q ss_pred CeEEEEeCCCC----CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH---H-------------------------
Q 004760 243 RKFILIFHELS----MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE---L------------------------- 290 (732)
Q Consensus 243 ~kIllI~h~ls----~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e---l------------------------- 290 (732)
.||++|+.|.. .||-.=++-.|.++|+++||+|.||.+.- +.+... +
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKY-GTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCC-CchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 78999999984 78999999999999999999999998532 221110 0
Q ss_pred --HhCCcEEEEcC-----------C---------Cch------------hhh--hcCccEEEeCCchhhHHHHHHHHhhc
Q 004760 291 --ARRKIKVLEDR-----------G---------EPS------------FKT--SMKADLVIAGSAVCATWIDQYITRFP 334 (732)
Q Consensus 291 --~~~gI~v~~~~-----------~---------~~~------------~~~--~~k~DlVia~Sav~~~~i~~~i~~~~ 334 (732)
...+++++... . +.. +.. ..+||+||+|... +.++..++....
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~-t~l~~~~l~~~~ 163 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWY-AGLVPLLLKTVY 163 (489)
T ss_pred cccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcH-HHHHHHHHHHHh
Confidence 00123332111 0 000 111 3589999999733 344555553322
Q ss_pred -----CCCccEEEEEeechh---------------HhHH----------HhhhhhccccEEEEecHHhHHHhhhHHHhhh
Q 004760 335 -----AGGSQVVWWIMENRR---------------EYFD----------RAKLVLDRVKLLVFLSESQTKQWLTWCEEEK 384 (732)
Q Consensus 335 -----~~~~~ivw~i~e~r~---------------~~~~----------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~ 384 (732)
....+.+..+|.... .++. ..+..+...+.++++|+...+. +.....
T Consensus 164 ~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~e---i~~~~~ 240 (489)
T PRK14098 164 ADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEE---IAGDGE 240 (489)
T ss_pred hhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHH---hCcCCC
Confidence 112457777774221 0000 0122334578899999886432 110000
Q ss_pred hhccCCCccccccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC--CCEEEEEEec
Q 004760 385 LKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD--QDMLVLSLSS 451 (732)
Q Consensus 385 i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~--~~~lil~vGr 451 (732)
...+... + +. .....+.+|+||+|++.|.|.... +.+...+..+++++|++. +.++|+++||
T Consensus 241 ~~~gl~~-~--l~--~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgR 315 (489)
T PRK14098 241 EAFGLDK-V--LE--ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIIN 315 (489)
T ss_pred CCcChHH-H--HH--hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEecc
Confidence 0001100 0 00 001245899999999988875321 011224567899999974 4679999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 452 INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 452 i~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
+.++||++++++|+..+.+. +
T Consensus 316 l~~~KG~d~li~a~~~l~~~--~--------------------------------------------------------- 336 (489)
T PRK14098 316 FDDFQGAELLAESLEKLVEL--D--------------------------------------------------------- 336 (489)
T ss_pred ccccCcHHHHHHHHHHHHhc--C---------------------------------------------------------
Confidence 99999999999999988542 2
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEeccCchh--hhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEE
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ--QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML 609 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~--~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~ 609 (732)
.+++++|.|+. .+.++.++ +. ++++|.
T Consensus 337 ----------------------------~~lvivG~G~~~~~~~l~~l~---------------------~~--~~~~V~ 365 (489)
T PRK14098 337 ----------------------------IQLVICGSGDKEYEKRFQDFA---------------------EE--HPEQVS 365 (489)
T ss_pred ----------------------------cEEEEEeCCCHHHHHHHHHHH---------------------HH--CCCCEE
Confidence 25778888753 23333332 22 246899
Q ss_pred Eccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc----CceEEEECCCCCcHHHH
Q 004760 610 WTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH----NVTGLLHPPGHPGAQVL 683 (732)
Q Consensus 610 f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~----g~~Gll~~~~d~~~e~L 683 (732)
|+|.. +++..+|++||++|+||. .|+||++.+|||+||+|+|+++.||+.|.|.+ +.+|+++++.|+ ++|
T Consensus 366 ~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~--~~l 441 (489)
T PRK14098 366 VQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTP--EAL 441 (489)
T ss_pred EEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCH--HHH
Confidence 99865 457899999999999998 99999999999999999999999999998864 679999999988 999
Q ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 684 AQNLRYLL---KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 684 a~aL~~LL---~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+++|.+++ +|++.+++|+.++. .+.|||+.++++|.++|++++.+
T Consensus 442 a~ai~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~~~~~ 489 (489)
T PRK14098 442 VAKLGEALALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRELLGP 489 (489)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHhcC
Confidence 99998754 68888888877664 46899999999999999998764
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-27 Score=246.80 Aligned_cols=342 Identities=25% Similarity=0.381 Sum_probs=247.1
Q ss_pred EEEEeCCCCC---CcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhC----------CcEEE-EcCCCc------
Q 004760 245 FILIFHELSM---TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARR----------KIKVL-EDRGEP------ 304 (732)
Q Consensus 245 IllI~h~ls~---gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~----------gI~v~-~~~~~~------ 304 (732)
||+|+|.... ||++..+.+++.+|.+.||+|.+++.............. ..... ......
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA 80 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence 5778888875 999999999999999999999999965543322111100 00000 000000
Q ss_pred ----hhhh--hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH-------hHHHhhhhhccccEEEEecHH
Q 004760 305 ----SFKT--SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE-------YFDRAKLVLDRVKLLVFLSES 371 (732)
Q Consensus 305 ----~~~~--~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~-------~~~~~~~~l~r~~~li~vS~~ 371 (732)
.+.. ..+||+|+++......++...+.. ..+ .++++++|..... +....+..+.+++.++++|+.
T Consensus 81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~-~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~ 158 (377)
T cd03798 81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKR-KLG-IPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEA 158 (377)
T ss_pred HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHH-hcC-CCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCHH
Confidence 0333 779999999854444333322222 222 2355666532211 111233455668899999988
Q ss_pred hHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEec
Q 004760 372 QTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSS 451 (732)
Q Consensus 372 ~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGr 451 (732)
.... + .+... + ...+.++|||+|...+.+..... . ..++...+.+.++++|+
T Consensus 159 ~~~~----~----~~~~~-~----------~~~~~~i~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~i~~~g~ 210 (377)
T cd03798 159 LADE----L----KALGI-D----------PEKVTVIPNGVDTERFSPADRAE-------A--RKLGLPEDKKVILFVGR 210 (377)
T ss_pred HHHH----H----HHhcC-C----------CCceEEcCCCcCcccCCCcchHH-------H--HhccCCCCceEEEEecc
Confidence 6443 2 11111 1 12348999999999887654311 1 34556677889999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 452 INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 452 i~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
+.+.||++.+++++..+.++.++
T Consensus 211 ~~~~k~~~~li~~~~~~~~~~~~--------------------------------------------------------- 233 (377)
T cd03798 211 LVPRKGIDYLIEALARLLKKRPD--------------------------------------------------------- 233 (377)
T ss_pred CccccCHHHHHHHHHHHHhcCCC---------------------------------------------------------
Confidence 99999999999999998765443
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~ 611 (732)
.++.++|.|+....++.++. .+++.++|.+.
T Consensus 234 ----------------------------~~l~i~g~~~~~~~~~~~~~---------------------~~~~~~~v~~~ 264 (377)
T cd03798 234 ----------------------------VHLVIVGDGPLREALEALAA---------------------ELGLEDRVTFL 264 (377)
T ss_pred ----------------------------eEEEEEcCCcchHHHHHHHH---------------------hcCCcceEEEe
Confidence 24666777765554444432 33677899999
Q ss_pred cch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 612 PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 612 G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
|+. +++.++|+.||++++||. .|++|++++|||+||+|||+++.++..|++.++.+|+++++.|. ++++++|.+
T Consensus 265 g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~--~~l~~~i~~ 340 (377)
T cd03798 265 GAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDP--EALAEAILR 340 (377)
T ss_pred CCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCH--HHHHHHHHH
Confidence 976 679999999999999998 89999999999999999999999999999999999999999888 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
++++++. ++..++++.+.+.|+|+.+++++.++|+++
T Consensus 341 ~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 341 LLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 9999887 788899999999999999999999999764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-27 Score=262.98 Aligned_cols=347 Identities=15% Similarity=0.125 Sum_probs=231.7
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc--h---------------
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP--S--------------- 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~--~--------------- 305 (732)
+||++++ . .+.|++..+.++|++|++.||+|++++....+...+.....||.++...... .
T Consensus 4 ~~~~~~~-~-~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (415)
T cd03816 4 KRVCVLV-L-GDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVLW 81 (415)
T ss_pred cEEEEEE-e-cccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHHHHHHH
Confidence 3444443 3 4566666779999999999999999997655544343667899988876553 1
Q ss_pred --------hhhhcCccEEEeCCchh-hHHHHHHHHhhcCCCccEEEEEeechh--------------HhHHHh-hhhhcc
Q 004760 306 --------FKTSMKADLVIAGSAVC-ATWIDQYITRFPAGGSQVVWWIMENRR--------------EYFDRA-KLVLDR 361 (732)
Q Consensus 306 --------~~~~~k~DlVia~Sav~-~~~i~~~i~~~~~~~~~ivw~i~e~r~--------------~~~~~~-~~~l~r 361 (732)
+....+||+||+++... ..+...++.....+.+ ++..+|.... .++... +....+
T Consensus 82 ~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~-~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 160 (415)
T cd03816 82 QFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTK-LIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCe-EEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhhc
Confidence 12245899999876332 1222233333334444 3333332110 011111 122344
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHH------
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRK------ 435 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~------ 435 (732)
.+.++++|+..... . .+.+..+ + .+.+|||| +...|.|....+.. ..+++
T Consensus 161 ad~ii~vS~~~~~~----l----~~~~~~~-------~----ki~vI~Ng-~~~~f~p~~~~~~~----~~~~~~~~~~~ 216 (415)
T cd03816 161 ADYNLCVTKAMKED----L----QQFNNWK-------I----RATVLYDR-PPEQFRPLPLEEKH----ELFLKLAKTFL 216 (415)
T ss_pred CCEeeecCHHHHHH----H----HhhhccC-------C----CeeecCCC-CHHHceeCcHHHHH----HHHHhcccccc
Confidence 89999999986442 1 1122222 2 34899999 44566554332211 11111
Q ss_pred -------HhCC-CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccc
Q 004760 436 -------EMGL-TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQM 507 (732)
Q Consensus 436 -------~lgl-~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~ 507 (732)
..++ +++..+++++|++.+.||++.||+|+..+.+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~-------------------------------- 264 (415)
T cd03816 217 TRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG-------------------------------- 264 (415)
T ss_pred ccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc--------------------------------
Confidence 1122 244567889999999999999999999986543210
Q ss_pred cccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCC
Q 004760 508 SDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNK 587 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~ 587 (732)
...+..+++++|+|+.++.++.++..
T Consensus 265 -----------------------------------------------~~~~~i~l~ivG~G~~~~~l~~~~~~------- 290 (415)
T cd03816 265 -----------------------------------------------PKLPKLLCIITGKGPLKEKYLERIKE------- 290 (415)
T ss_pred -----------------------------------------------ccCCCEEEEEEecCccHHHHHHHHHH-------
Confidence 00012468899999887777766643
Q ss_pred hhhHHHHHHHHHhcCCCCCcEEEccc--hhhHHHHHHHcCEEEEccCC-CCCCCcHHHHHHHHcCCCEEEcCCCChhhhh
Q 004760 588 VPYVKEILEFLSQHSNLSKAMLWTPA--TTRVASLYSAADVYVINSQG-LGETFGRVTIEAMAFGVPVLGTDAGGTKEIV 664 (732)
Q Consensus 588 ~~y~k~il~~l~~~l~l~~~V~f~G~--~~dv~~lysaADv~V~pS~~-~~Egfg~vilEAMA~GlPVI~td~gG~~EiV 664 (732)
+++.+.+.+.|+ .++++.+|++||++|+++.. ..|++|++++||||||+|||+|+.||..|+|
T Consensus 291 --------------~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv 356 (415)
T cd03816 291 --------------LKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELV 356 (415)
T ss_pred --------------cCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHh
Confidence 367655556675 48999999999999975321 2578999999999999999999999999999
Q ss_pred ccCceEEEECCCCCcHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 665 EHNVTGLLHPPGHPGAQVLAQNLRYLLKN---PSVRERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 665 e~g~~Gll~~~~d~~~e~La~aL~~LL~n---~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
+++.+|++++ |+ ++|+++|..+++| ++.+++|++++++..+ ++|++.+++.+
T Consensus 357 ~~~~~G~lv~--d~--~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~--~~~~~~~~~~~ 411 (415)
T cd03816 357 KHGENGLVFG--DS--EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE--LRWDENWDRVV 411 (415)
T ss_pred cCCCCEEEEC--CH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh--cCHHHHHHHHh
Confidence 9999999984 55 9999999999999 9999999999998874 67776666543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=250.27 Aligned_cols=333 Identities=20% Similarity=0.237 Sum_probs=233.6
Q ss_pred eEEEEeCCCCC---CcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEE----EcCCCch----------h
Q 004760 244 KFILIFHELSM---TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVL----EDRGEPS----------F 306 (732)
Q Consensus 244 kIllI~h~ls~---gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~----~~~~~~~----------~ 306 (732)
||+++++.+.. ||++.++.+|+++|.+.|++|.+++................... ....... .
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 58888888865 99999999999999999999999997655433222111111100 0000000 2
Q ss_pred hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh------------HhH-HHhhhhhccccEEEEecHHhH
Q 004760 307 KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------------EYF-DRAKLVLDRVKLLVFLSESQT 373 (732)
Q Consensus 307 ~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~------------~~~-~~~~~~l~r~~~li~vS~~~~ 373 (732)
....+||+||+++...... ...+ .++++++|.... .++ ......+...+.++++|+...
T Consensus 81 ~~~~~~Dii~~~~~~~~~~-------~~~~-~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 152 (365)
T cd03809 81 LLLLGLDLLHSPHNTAPLL-------RLRG-VPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATK 152 (365)
T ss_pred hhhcCCCeeeecccccCcc-------cCCC-CCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHH
Confidence 2256899998887544322 1223 335555653210 111 112344555889999998864
Q ss_pred HHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC
Q 004760 374 KQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (732)
Q Consensus 374 ~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~ 453 (732)
+.....+ +..+ ..+.++|||+|...+.+.... . +.......+.+.|+++|++.
T Consensus 153 ~~~~~~~-------~~~~-----------~~~~vi~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 153 RDLLRYL-------GVPP-----------DKIVVIPLGVDPRFRPPPAEA--------E-VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred HHHHHHh-------CcCH-----------HHEEeeccccCccccCCCchH--------H-HHHHhcCCCCCeEEEeCCCc
Confidence 4311111 1111 235899999999888664421 1 33344456678899999999
Q ss_pred CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccc
Q 004760 454 PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533 (732)
Q Consensus 454 ~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 533 (732)
+.||++.+++++..+.++.+.
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~----------------------------------------------------------- 226 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPD----------------------------------------------------------- 226 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCC-----------------------------------------------------------
Confidence 999999999999999776543
Q ss_pred ccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc
Q 004760 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA 613 (732)
Q Consensus 534 ~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~ 613 (732)
.+++++|.+...... ....+ +..+..++|+|+|+
T Consensus 227 --------------------------~~l~i~G~~~~~~~~-------------------~~~~~-~~~~~~~~v~~~g~ 260 (365)
T cd03809 227 --------------------------PKLVIVGKRGWLNEE-------------------LLARL-RELGLGDRVRFLGY 260 (365)
T ss_pred --------------------------CCEEEecCCccccHH-------------------HHHHH-HHcCCCCeEEECCC
Confidence 134455554321111 11111 23477889999998
Q ss_pred h--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh
Q 004760 614 T--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL 691 (732)
Q Consensus 614 ~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL 691 (732)
. +++..+|++||++++||. .|++|++++|||++|+|||+++.|++.|++.+ +|++++++|. ++++++|..++
T Consensus 261 ~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~~~~~~--~~~~~~i~~l~ 334 (365)
T cd03809 261 VSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYFDPLDP--EALAAAIERLL 334 (365)
T ss_pred CChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeeeCCCCH--HHHHHHHHHHh
Confidence 7 789999999999999998 89999999999999999999999999999864 6888888887 99999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 692 KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 692 ~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
.|++.+.+|++++++.++ .|+|+.+++++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~-~~sw~~~~~~~~~ 365 (365)
T cd03809 335 EDPALREELRERGLARAK-RFSWEKTARRTLD 365 (365)
T ss_pred cCHHHHHHHHHHHHHHHH-hCCHHHHHHHHhC
Confidence 999999999999996554 6999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=261.84 Aligned_cols=337 Identities=13% Similarity=0.085 Sum_probs=226.5
Q ss_pred eEEEEeCCCCCC-cHHHHHHHHHHHHHHC--CCEEEEEEeCCCCCC----------hhHHHhCCcEEEEc--C-CC--ch
Q 004760 244 KFILIFHELSMT-GAPLSMMELATELLSC--GATVSAVVLSKRGGL----------MPELARRKIKVLED--R-GE--PS 305 (732)
Q Consensus 244 kIllI~h~ls~g-GA~~~~~eLA~~L~~~--G~~V~vv~l~~~g~l----------~~el~~~gI~v~~~--~-~~--~~ 305 (732)
.|.++.++++.| |||+++++.|.+|++. +++|.+++......- .++-...+++++.. . .. ..
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 467888889988 9999999999999998 788888884332211 01111345554443 1 10 00
Q ss_pred ------------------hhh--hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech---hHhHH---------
Q 004760 306 ------------------FKT--SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR---REYFD--------- 353 (732)
Q Consensus 306 ------------------~~~--~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r---~~~~~--------- 353 (732)
+.. ..+||++|.++....++.. .....+. +++.++|+.. .....
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~---~~~~~~~-~~i~y~h~P~~~~d~l~~~~~~~~~~~ 157 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL---VRLLGGC-PVGAYVHYPTISTDMLQKVRSREASYN 157 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH---HHHhcCC-eEEEEecCCcchHHHHHHHhhcccccc
Confidence 111 3579999888755444332 2222233 5777777441 11100
Q ss_pred ------------------------HhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeec
Q 004760 354 ------------------------RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFT 409 (732)
Q Consensus 354 ------------------------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIp 409 (732)
........++.+++.|+.+... . ...... . ..+.+||
T Consensus 158 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~----~-----~~~~~~-------~---~~~~vi~ 218 (419)
T cd03806 158 NSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNH----I-----RSLWKR-------N---TKPSIVY 218 (419)
T ss_pred CccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHH----H-----HHHhCc-------C---CCcEEEc
Confidence 0112234488899999987543 1 111111 0 1238999
Q ss_pred CCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccc
Q 004760 410 CSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489 (732)
Q Consensus 410 ngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~ 489 (732)
||+|++.|.+... ....+...|+++|++.+.||++.+|+|+..+.++.|..
T Consensus 219 ~gvd~~~~~~~~~---------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~-------------- 269 (419)
T cd03806 219 PPCDVEELLKLPL---------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEE-------------- 269 (419)
T ss_pred CCCCHHHhccccc---------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCccc--------------
Confidence 9999887754321 01234578999999999999999999999998766541
Q ss_pred cccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch
Q 004760 490 KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK 569 (732)
Q Consensus 490 ~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~ 569 (732)
..+..+++++|+|.
T Consensus 270 ------------------------------------------------------------------~~~~~~lvivG~~~ 283 (419)
T cd03806 270 ------------------------------------------------------------------IKEKIKLVLIGSCR 283 (419)
T ss_pred ------------------------------------------------------------------ccCceEEEEEcCCC
Confidence 00124677888763
Q ss_pred hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHH
Q 004760 570 QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMA 647 (732)
Q Consensus 570 ~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA 647 (732)
... +.++.+++ +.+.+.+++.++|+|+|.. +++..+|+.||++|+||. .|+||++++||||
T Consensus 284 ~~~--------------~~~~~~~L-~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa 346 (419)
T cd03806 284 NED--------------DEKRVEDL-KLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMA 346 (419)
T ss_pred Ccc--------------cHHHHHHH-HHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHH
Confidence 211 12233333 4444555899999999974 789999999999999998 8999999999999
Q ss_pred cCCCEEEcCCCCh-hhhhc---cCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 004760 648 FGVPVLGTDAGGT-KEIVE---HNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYK 719 (732)
Q Consensus 648 ~GlPVI~td~gG~-~EiVe---~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~ 719 (732)
||+|||+++.||. .|+++ ++.+|++++ |+ +++|++|.+++++++...++..++++.+.++|+++.+.+
T Consensus 347 ~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~--~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 347 AGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TA--EEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred cCCcEEEEcCCCCchheeeccCCCCceEEeC--CH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 9999999999774 57888 889999974 55 999999999999765444434555556777899998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=267.79 Aligned_cols=275 Identities=23% Similarity=0.327 Sum_probs=207.8
Q ss_pred cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeec--hhH---h-----------------HHH-hhhhhccccEEE
Q 004760 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMEN--RRE---Y-----------------FDR-AKLVLDRVKLLV 366 (732)
Q Consensus 310 ~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~--r~~---~-----------------~~~-~~~~l~r~~~li 366 (732)
.++|+||+++...+.++.. +.....+.+ +++..|.. ++. + +.. .+..+..++.++
T Consensus 172 ~~~dviH~~s~~~~g~~~~-~~~~~~~~p-~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGA-LAKARRGTP-FLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHH-HHHHHhCCC-EEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 4899999997644443333 333334445 55555531 110 0 000 122334588899
Q ss_pred EecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEE
Q 004760 367 FLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLV 446 (732)
Q Consensus 367 ~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~li 446 (732)
++|+..... . ...+..+ ..+.+||||+|...|.+.... ...++.++|
T Consensus 250 ~~s~~~~~~----~----~~~g~~~-----------~ki~vIpNgid~~~f~~~~~~--------------~~~~~~~~i 296 (475)
T cd03813 250 TLYEGNRER----Q----IEDGADP-----------EKIRVIPNGIDPERFAPARRA--------------RPEKEPPVV 296 (475)
T ss_pred ecCHHHHHH----H----HHcCCCH-----------HHeEEeCCCcCHHHcCCcccc--------------ccCCCCcEE
Confidence 998875331 2 2233322 234899999999988664320 123567789
Q ss_pred EEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhh
Q 004760 447 LSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFT 526 (732)
Q Consensus 447 l~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~ 526 (732)
+++|++.+.||++.+|+|++.+.++.|+
T Consensus 297 ~~vGrl~~~Kg~~~li~a~~~l~~~~p~---------------------------------------------------- 324 (475)
T cd03813 297 GLIGRVVPIKDIKTFIRAAAIVRKKIPD---------------------------------------------------- 324 (475)
T ss_pred EEEeccccccCHHHHHHHHHHHHHhCCC----------------------------------------------------
Confidence 9999999999999999999999877665
Q ss_pred ccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCC
Q 004760 527 QLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSK 606 (732)
Q Consensus 527 ~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~ 606 (732)
.+++++|.|+.. ..|.+++.+. .+.+++.+
T Consensus 325 ---------------------------------~~l~IvG~g~~~----------------~~~~~e~~~l-i~~l~l~~ 354 (475)
T cd03813 325 ---------------------------------AEGWVIGPTDED----------------PEYAEECREL-VESLGLED 354 (475)
T ss_pred ---------------------------------eEEEEECCCCcC----------------hHHHHHHHHH-HHHhCCCC
Confidence 246667766421 2233344333 34458999
Q ss_pred cEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc------CceEEEECCCCCcH
Q 004760 607 AMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH------NVTGLLHPPGHPGA 680 (732)
Q Consensus 607 ~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~------g~~Gll~~~~d~~~ 680 (732)
+|.|+| .+++.++|++||++|+||. .|+||++++||||||+|||+|+.||+.|++++ |.+|++++++|+
T Consensus 355 ~V~f~G-~~~v~~~l~~aDv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~-- 429 (475)
T cd03813 355 NVKFTG-FQNVKEYLPKLDVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADP-- 429 (475)
T ss_pred eEEEcC-CccHHHHHHhCCEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCH--
Confidence 999999 7799999999999999998 99999999999999999999999999999998 569999999988
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++++++|.++++|++.+++|++++++.+++.|+|++++++|.++|+
T Consensus 430 ~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 430 EALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=263.97 Aligned_cols=348 Identities=15% Similarity=0.155 Sum_probs=233.4
Q ss_pred cCCeEEEEeCCCCCC-cHHHHHHHHHHHHHHCCCEEEEEEeCCC---CC---ChhHHHhCCcEE------EEc-CC-C--
Q 004760 241 WSRKFILIFHELSMT-GAPLSMMELATELLSCGATVSAVVLSKR---GG---LMPELARRKIKV------LED-RG-E-- 303 (732)
Q Consensus 241 ~~~kIllI~h~ls~g-GA~~~~~eLA~~L~~~G~~V~vv~l~~~---g~---l~~el~~~gI~v------~~~-~~-~-- 303 (732)
.+++|.++-++++.| |||+++.+.+.+|+++|+++.|+..... .. +.....+.+|.+ +.+ .. .
T Consensus 32 ~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~~~~~~~ 111 (463)
T PLN02949 32 RKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIE 111 (463)
T ss_pred CCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEeccccccc
Confidence 356888888888777 9999999999999999995555544422 11 111223444422 222 11 1
Q ss_pred ch------------------hh--hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHh------------
Q 004760 304 PS------------------FK--TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREY------------ 351 (732)
Q Consensus 304 ~~------------------~~--~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~------------ 351 (732)
.. +. ....|| |+..+.-.+.+++ +.+ .. ..++++++|+.-...
T Consensus 112 ~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~-v~vDt~~~~~~~p--l~~-~~-~~~v~~yvH~p~~~~dm~~~v~~~~~~ 186 (463)
T PLN02949 112 EETYPRFTMIGQSLGSVYLAWEALCKFTPL-YFFDTSGYAFTYP--LAR-LF-GCKVVCYTHYPTISSDMISRVRDRSSM 186 (463)
T ss_pred cccCCceehHHHHHHHHHHHHHHHHhcCCC-EEEeCCCcccHHH--HHH-hc-CCcEEEEEeCCcchHHHHHHHhhcccc
Confidence 10 00 123455 5565543333333 222 22 356888888642110
Q ss_pred -------------------HHHh-----hhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEe
Q 004760 352 -------------------FDRA-----KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAG 407 (732)
Q Consensus 352 -------------------~~~~-----~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~v 407 (732)
+.+. .......+.+++.|+.+..... +....+ + .+.+
T Consensus 187 ~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~--------~~~~~~-------~----~i~v 247 (463)
T PLN02949 187 YNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIE--------ALWRIP-------E----RIKR 247 (463)
T ss_pred cCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHH--------HHcCCC-------C----CeEE
Confidence 0000 0111337888888888754311 111111 1 2478
Q ss_pred ecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccc
Q 004760 408 FTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVG 487 (732)
Q Consensus 408 Ipngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~ 487 (732)
+|+|+|++.+...+.. -+.+...++++|++.+.||++++|+|++.+.++.+..
T Consensus 248 vyp~vd~~~~~~~~~~---------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~------------ 300 (463)
T PLN02949 248 VYPPCDTSGLQALPLE---------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDAD------------ 300 (463)
T ss_pred EcCCCCHHHcccCCcc---------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhcccc------------
Confidence 9999998765322110 0133467899999999999999999999987643320
Q ss_pred cccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccC
Q 004760 488 RKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSD 567 (732)
Q Consensus 488 ~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~ 567 (732)
.+..+|+++|+
T Consensus 301 ---------------------------------------------------------------------~~~~~LvIvG~ 311 (463)
T PLN02949 301 ---------------------------------------------------------------------VPRPKLQFVGS 311 (463)
T ss_pred ---------------------------------------------------------------------CCCcEEEEEeC
Confidence 01246778887
Q ss_pred chhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHH
Q 004760 568 GKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEA 645 (732)
Q Consensus 568 G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEA 645 (732)
+... ++.++.+++.+. .+.+++.++|.|+|.. +++..+|+.||++|.||. .|+||++++||
T Consensus 312 ~~~~--------------~~~~~~~eL~~l-a~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEA 374 (463)
T PLN02949 312 CRNK--------------EDEERLQKLKDR-AKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEY 374 (463)
T ss_pred CCCc--------------ccHHHHHHHHHH-HHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHH
Confidence 6321 112333444433 3455899999999976 789999999999999997 99999999999
Q ss_pred HHcCCCEEEcCCCChh-hhhcc---CceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 004760 646 MAFGVPVLGTDAGGTK-EIVEH---NVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKK 720 (732)
Q Consensus 646 MA~GlPVI~td~gG~~-EiVe~---g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~ 720 (732)
||+|+|||+++.||.. |++.+ +.+|++++ |+ ++|+++|.++++ +++.+++|++++++.++ +|||+.++++
T Consensus 375 MA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~--~~la~ai~~ll~~~~~~r~~m~~~ar~~~~-~FS~e~~~~~ 449 (463)
T PLN02949 375 MAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV--EEYADAILEVLRMRETERLEIAAAARKRAN-RFSEQRFNED 449 (463)
T ss_pred HHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HcCHHHHHHH
Confidence 9999999999998864 77764 57898874 55 999999999998 57889999999999995 5999999999
Q ss_pred HHHHHHHhhc
Q 004760 721 LSQVIYKCMK 730 (732)
Q Consensus 721 ~~ev~~~~l~ 730 (732)
+.+++.++++
T Consensus 450 ~~~~i~~l~~ 459 (463)
T PLN02949 450 FKDAIRPILN 459 (463)
T ss_pred HHHHHHHHHh
Confidence 9999998775
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=253.92 Aligned_cols=332 Identities=15% Similarity=0.177 Sum_probs=223.6
Q ss_pred EEEEeCCCC---CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCC-Ch--hHHH--hCCcEEEEcCCCc------------
Q 004760 245 FILIFHELS---MTGAPLSMMELATELLSCGATVSAVVLSKRGG-LM--PELA--RRKIKVLEDRGEP------------ 304 (732)
Q Consensus 245 IllI~h~ls---~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~-l~--~el~--~~gI~v~~~~~~~------------ 304 (732)
||+++|..- .+|..+.+++++++|++. |+|+++++..... .. +.++ -..+.++......
T Consensus 1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (397)
T TIGR03087 1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTG 79 (397)
T ss_pred CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCC
Confidence 577777763 467899999999999665 8999999875332 21 1221 1122332221110
Q ss_pred ---------h---------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech---------------hHh
Q 004760 305 ---------S---------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR---------------REY 351 (732)
Q Consensus 305 ---------~---------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r---------------~~~ 351 (732)
+ +..+.++|+||+++...+.++ .....+.+ .++..|... ..+
T Consensus 80 ~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~----~~~~~~~p-~i~~~~d~~~~~~~~~~~~~~~~~~~~ 154 (397)
T TIGR03087 80 EPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYV----TPHVRGVP-RIVDFVDVDSDKWLQYARTKRWPLRWI 154 (397)
T ss_pred CCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceec----cccccCCC-eEeehhhHHHHHHHHHHhccCcchhHH
Confidence 0 122479999999875443322 11122333 222222100 000
Q ss_pred H--------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhH
Q 004760 352 F--------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR 423 (732)
Q Consensus 352 ~--------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ 423 (732)
+ ...+....+++.++++|+..... + .+..... ...+.+||||+|.+.|.+....
T Consensus 155 ~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~----l----~~~~~~~----------~~~v~vipngvd~~~f~~~~~~ 216 (397)
T TIGR03087 155 YRREGRLLLAYERAIAARFDAATFVSRAEAEL----F----RRLAPEA----------AGRITAFPNGVDADFFSPDRDY 216 (397)
T ss_pred HHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHH----H----HHhCCCC----------CCCeEEeecccchhhcCCCccc
Confidence 0 00123345589999999987443 2 1111111 1134899999999988764321
Q ss_pred HHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHH----HHHHhHHhCCCCchhhhhhccccccccccccccccc
Q 004760 424 EKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVE----SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHL 499 (732)
Q Consensus 424 ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLe----A~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l 499 (732)
. -.+..+..+|+|+|++.+.||++.++. ++..+.++.|+
T Consensus 217 ~------------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~------------------------- 259 (397)
T TIGR03087 217 P------------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPA------------------------- 259 (397)
T ss_pred c------------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCC-------------------------
Confidence 0 012345568999999999999999884 45555544444
Q ss_pred cccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhh
Q 004760 500 RGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIG 579 (732)
Q Consensus 500 ~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~ 579 (732)
.+++++|+|+.. .++.+
T Consensus 260 ------------------------------------------------------------~~l~ivG~g~~~-~~~~l-- 276 (397)
T TIGR03087 260 ------------------------------------------------------------AEFYIVGAKPSP-AVRAL-- 276 (397)
T ss_pred ------------------------------------------------------------cEEEEECCCChH-HHHHh--
Confidence 357788888642 22211
Q ss_pred ccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 580 SVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 580 ~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
+..++|+|+|+++++..+|+.||++|+||+ ..||+|++++||||||+|||+|+.++
T Consensus 277 -----------------------~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~-~~eG~~~~~lEAma~G~PVV~t~~~~ 332 (397)
T TIGR03087 277 -----------------------AALPGVTVTGSVADVRPYLAHAAVAVAPLR-IARGIQNKVLEAMAMAKPVVASPEAA 332 (397)
T ss_pred -----------------------ccCCCeEEeeecCCHHHHHHhCCEEEeccc-ccCCcccHHHHHHHcCCCEEecCccc
Confidence 234579999999999999999999999997 37999999999999999999999754
Q ss_pred hhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 660 TKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 660 ~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
. .+...+.+|++++ +|+ ++|+++|.++++|++.+++|++++++.++++|+|+.+++++.++|..|
T Consensus 333 ~-~i~~~~~~g~lv~-~~~--~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~~ 397 (397)
T TIGR03087 333 E-GIDALPGAELLVA-ADP--ADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQP 397 (397)
T ss_pred c-cccccCCcceEeC-CCH--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 2 3344446788887 666 999999999999999999999999999999999999999999998653
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=256.95 Aligned_cols=330 Identities=14% Similarity=0.089 Sum_probs=223.2
Q ss_pred cCCeEEEEeCCC--CCCcHHHHHHHHHHHHHHCC-CEEEEEEeCCCC---------------CChhH--H---HhCCc--
Q 004760 241 WSRKFILIFHEL--SMTGAPLSMMELATELLSCG-ATVSAVVLSKRG---------------GLMPE--L---ARRKI-- 295 (732)
Q Consensus 241 ~~~kIllI~h~l--s~gGA~~~~~eLA~~L~~~G-~~V~vv~l~~~g---------------~l~~e--l---~~~gI-- 295 (732)
++.||++++... .++|+..++..+|.+|.+.| |+|.+|.+.-.. +..++ . ....|
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 468899888877 58999999999999999999 799999864221 00011 0 00111
Q ss_pred -EEEEcCCCch-----------------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhh-
Q 004760 296 -KVLEDRGEPS-----------------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAK- 356 (732)
Q Consensus 296 -~v~~~~~~~~-----------------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~- 356 (732)
+-+..+..+. ...+.+||+||+++-....|...... .......++...|.+...|+....
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~-~~~k~~~vV~tyHT~y~~Y~~~~~~ 161 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKR-WKTKFRLVIGIVHTNYLEYVKREKN 161 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHH-HHhcCCcEEEEECCChHHHHHHhcc
Confidence 1111111111 23378999999999888887521111 111112255556665555543321
Q ss_pred ------------hhh--ccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhh
Q 004760 357 ------------LVL--DRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKM 422 (732)
Q Consensus 357 ------------~~l--~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~ 422 (732)
.++ ...+.++..|..... +. . .+....+|+|...|.+...
T Consensus 162 g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~------------l~--~------------~~i~~v~GVd~~~f~~~~~ 215 (462)
T PLN02846 162 GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD------------YP--R------------SIICNVHGVNPKFLEIGKL 215 (462)
T ss_pred chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH------------Hh--h------------CEEecCceechhhcCCCcc
Confidence 111 013444555543210 00 0 1123458999998876542
Q ss_pred HHHhHHhHHHHHHHhCCCCCC--EEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccc
Q 004760 423 REKRNLLRDSVRKEMGLTDQD--MLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLR 500 (732)
Q Consensus 423 ~ekr~~~r~~~R~~lgl~~~~--~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~ 500 (732)
. .++... .++. ..++|+||+.+.||++.||+|++.+.+..++
T Consensus 216 ~---------~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~-------------------------- 259 (462)
T PLN02846 216 K---------LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSG-------------------------- 259 (462)
T ss_pred c---------HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCC--------------------------
Confidence 1 222222 3442 3689999999999999999999998665544
Q ss_pred ccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhc
Q 004760 501 GRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGS 580 (732)
Q Consensus 501 g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~ 580 (732)
.+++++|+|++++.|+.++..
T Consensus 260 -----------------------------------------------------------~~l~ivGdGp~~~~L~~~a~~ 280 (462)
T PLN02846 260 -----------------------------------------------------------LEVDLYGSGEDSDEVKAAAEK 280 (462)
T ss_pred -----------------------------------------------------------eEEEEECCCccHHHHHHHHHh
Confidence 368899999999988887743
Q ss_pred cCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh
Q 004760 581 VGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT 660 (732)
Q Consensus 581 ~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~ 660 (732)
. ++...+ |.|. .+..++|..+|+||+||. .|+||++++||||||+|||+++.++
T Consensus 281 l---------------------~l~~~v-f~G~-~~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~- 334 (462)
T PLN02846 281 L---------------------ELDVRV-YPGR-DHADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPS- 334 (462)
T ss_pred c---------------------CCcEEE-ECCC-CCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCC-
Confidence 3 554444 7785 466689999999999998 9999999999999999999999998
Q ss_pred hhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 661 KEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 661 ~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
.|++.++.+|++++ |. +++++++..++.++. .+++.+++ +.|||+..+++++++|+-.
T Consensus 335 ~~~v~~~~ng~~~~--~~--~~~a~ai~~~l~~~~--~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 335 NEFFKQFPNCRTYD--DG--KGFVRATLKALAEEP--APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred cceeecCCceEecC--CH--HHHHHHHHHHHccCc--hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 59999999998884 44 899999999998543 33433333 4799999999999998643
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=267.48 Aligned_cols=224 Identities=18% Similarity=0.224 Sum_probs=168.8
Q ss_pred eEEeecCCCCCCCCCchhhHHHhH-H----------hHHHHHHHhCC--CCCCEEEEEEecCCCCCCHHHHHHHHHHhHH
Q 004760 404 FVAGFTCSLNTPTSSPEKMREKRN-L----------LRDSVRKEMGL--TDQDMLVLSLSSINPGKGQLLLVESAQLMIE 470 (732)
Q Consensus 404 ~v~vIpngvd~~~f~~~~~~ekr~-~----------~r~~~R~~lgl--~~~~~lil~vGri~~~KG~d~LLeA~~~l~~ 470 (732)
.+.+||||+|...|.|....+++- . .....++.+|+ +.+.++|+++||+.+.||++.||+|+..+.+
T Consensus 521 ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~ 600 (815)
T PLN00142 521 KFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKR 600 (815)
T ss_pred CeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHH
Confidence 558899999999887654322110 0 01123456776 4456789999999999999999999998754
Q ss_pred hCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCc
Q 004760 471 QEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDA 550 (732)
Q Consensus 471 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~ 550 (732)
..++
T Consensus 601 l~~~---------------------------------------------------------------------------- 604 (815)
T PLN00142 601 LREL---------------------------------------------------------------------------- 604 (815)
T ss_pred hCCC----------------------------------------------------------------------------
Confidence 4332
Q ss_pred cccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch------hhHHHHHH-H
Q 004760 551 VSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT------TRVASLYS-A 623 (732)
Q Consensus 551 v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~------~dv~~lys-a 623 (732)
.+|+++|.|.....- ....+..+++++. .+.+.+++.++|.|+|.+ .++..+|+ +
T Consensus 605 ---------~~LVIVGgg~d~~~s--------~d~ee~~el~~L~-~La~~lgL~~~V~flG~~~~~~~~~eLyr~iada 666 (815)
T PLN00142 605 ---------VNLVVVGGFIDPSKS--------KDREEIAEIKKMH-SLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADT 666 (815)
T ss_pred ---------cEEEEEECCcccccc--------ccHHHHHHHHHHH-HHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhh
Confidence 256677765210000 0000001222333 344556999999999854 34666666 4
Q ss_pred cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHH----hcCHHHHHH
Q 004760 624 ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYL----LKNPSVRER 699 (732)
Q Consensus 624 ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~L----L~n~~~r~~ 699 (732)
+|+||+||. +|+||++++||||||+|||+|+.||+.|+|.++.+|+++++.|+ ++++++|..+ +.|++.+++
T Consensus 667 aDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~--eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 667 KGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHG--DEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred CCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCH--HHHHHHHHHHHHHhcCCHHHHHH
Confidence 799999997 99999999999999999999999999999999999999999988 9999998754 579999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 700 MAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 700 m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
|+++|++++.++|+|+.++++++++.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999875
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=254.31 Aligned_cols=226 Identities=16% Similarity=0.226 Sum_probs=176.7
Q ss_pred hccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhC
Q 004760 359 LDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG 438 (732)
Q Consensus 359 l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lg 438 (732)
.+.++.++++|+.+.......+ ...+.. ...+.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~----~~~~~~-----------~~ki~viP~g~~~~~~~~~~----------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQF----KKYYNI-----------EPRIYTIPVGSLDELQYPEQ----------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHh----hhhcCC-----------CCcEEEEcCCCcccccCccc-----------------
Confidence 3447889999998744211111 001111 12357999997654443211
Q ss_pred CCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccccc
Q 004760 439 LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNEL 518 (732)
Q Consensus 439 l~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~ 518 (732)
..+...|+++||+.+.||++.+|+|+..+.++.|+
T Consensus 316 -~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~-------------------------------------------- 350 (500)
T TIGR02918 316 -ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPE-------------------------------------------- 350 (500)
T ss_pred -ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCC--------------------------------------------
Confidence 12346799999999999999999999999877665
Q ss_pred ccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHH
Q 004760 519 SVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFL 598 (732)
Q Consensus 519 ~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l 598 (732)
.+|.++|.|+..+.++.++.
T Consensus 351 -----------------------------------------~~l~i~G~G~~~~~l~~~i~------------------- 370 (500)
T TIGR02918 351 -----------------------------------------LTFDIYGEGGEKQKLQKIIN------------------- 370 (500)
T ss_pred -----------------------------------------eEEEEEECchhHHHHHHHHH-------------------
Confidence 35778899987666665553
Q ss_pred HhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-ChhhhhccCceEEEECCC-
Q 004760 599 SQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-GTKEIVEHNVTGLLHPPG- 676 (732)
Q Consensus 599 ~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-G~~EiVe~g~~Gll~~~~- 676 (732)
.+++.++|.|+|+. ++.++|+.||++|+||. .||||++++||||||+|||+++++ |.+|+|+++.+|++++++
T Consensus 371 --~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~ 445 (500)
T TIGR02918 371 --ENQAQDYIHLKGHR-NLSEVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDE 445 (500)
T ss_pred --HcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCc
Confidence 33778899999976 89999999999999998 999999999999999999999985 899999999999999843
Q ss_pred ---CC-c-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 677 ---HP-G-AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 677 ---d~-~-~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
|+ + .++||++|..+++ ++.+++|++++++.++ .|+|+.++++|.++++.+
T Consensus 446 ~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~-~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 446 EEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAE-GFLTANIIEKWKKLVREV 500 (500)
T ss_pred cccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhC
Confidence 21 1 3899999999995 5678999999999776 599999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=238.84 Aligned_cols=303 Identities=21% Similarity=0.263 Sum_probs=201.1
Q ss_pred eEEEEeCCCC-CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch-----------------
Q 004760 244 KFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS----------------- 305 (732)
Q Consensus 244 kIllI~h~ls-~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~----------------- 305 (732)
||+++.+.+. +||+|+.+.+||+.|.+ .+|..+.. ..+.........++.+......+.
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~--~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPD--ADIFTLVD-DPDKLPRLLRLKKIRTSFIQKLPFARRRYRKYLPLMPLAIE 77 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCC--CCEEEEee-cCCccchhhcCCceeechhhhchhhHhhHhhhCchhhHHHH
Confidence 4666666664 89999999999999865 33433331 222222222112222221111100
Q ss_pred hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh-------HhH------------------HH-hhhhh
Q 004760 306 FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-------EYF------------------DR-AKLVL 359 (732)
Q Consensus 306 ~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~-------~~~------------------~~-~~~~l 359 (732)
.....++|+||+++...+. ++. .......++++|...+ .+. .. ....+
T Consensus 78 ~~~~~~~D~v~~~~~~~~~----~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (351)
T cd03804 78 QFDLSGYDLVISSSHAVAK----GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSA 151 (351)
T ss_pred hccccCCCEEEEcCcHHhc----ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHh
Confidence 1114689999887532221 111 1122234445443211 110 00 11234
Q ss_pred ccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCC
Q 004760 360 DRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGL 439 (732)
Q Consensus 360 ~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl 439 (732)
.+++.++++|+..... + .+. . + .+ ..+|+||+|.+.|.+..
T Consensus 152 ~~~d~ii~~S~~~~~~----~----~~~-~-~-------~~----~~vi~~~~d~~~~~~~~------------------ 192 (351)
T cd03804 152 ARVDYFIANSRFVARR----I----KKY-Y-G-------RD----ATVIYPPVDTDRFTPAE------------------ 192 (351)
T ss_pred cCCCEEEECCHHHHHH----H----HHH-h-C-------CC----cEEECCCCCHhhcCcCC------------------
Confidence 5688999999987543 2 111 1 1 11 16899999988776433
Q ss_pred CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccc
Q 004760 440 TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELS 519 (732)
Q Consensus 440 ~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~ 519 (732)
..+..++++|++.+.||++.+++|+..+ +
T Consensus 193 -~~~~~il~~G~~~~~K~~~~li~a~~~~----~---------------------------------------------- 221 (351)
T cd03804 193 -EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G---------------------------------------------- 221 (351)
T ss_pred -CCCCEEEEEEcCccccChHHHHHHHHHC----C----------------------------------------------
Confidence 1234688999999999999999999865 1
Q ss_pred cchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHH
Q 004760 520 VSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLS 599 (732)
Q Consensus 520 ~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~ 599 (732)
.+++++|+|++.+.++.
T Consensus 222 ----------------------------------------~~l~ivG~g~~~~~l~~----------------------- 238 (351)
T cd03804 222 ----------------------------------------KRLVVIGDGPELDRLRA----------------------- 238 (351)
T ss_pred ----------------------------------------CcEEEEECChhHHHHHh-----------------------
Confidence 14677888876544432
Q ss_pred hcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCC
Q 004760 600 QHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 600 ~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d 677 (732)
+..++|.|+|++ +++.++|++||++++|| .|+||++++||||||+|||+++.||..|++.++.+|++++++|
T Consensus 239 ---~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps---~e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~ 312 (351)
T cd03804 239 ---KAGPNVTFLGRVSDEELRDLYARARAFLFPA---EEDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQT 312 (351)
T ss_pred ---hcCCCEEEecCCCHHHHHHHHHhCCEEEECC---cCCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCC
Confidence 234789999987 45999999999999999 3999999999999999999999999999999999999999988
Q ss_pred CcHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPS-VRERMAMEGRKKVERMYLKKHMYKKL 721 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~-~r~~m~~~~r~~v~~~ys~~~~~~~~ 721 (732)
+ ++++++|..+++|++ .++++ ++.++ .|+|+++.+++
T Consensus 313 ~--~~la~~i~~l~~~~~~~~~~~----~~~~~-~~~~~~~~~~~ 350 (351)
T cd03804 313 V--ESLAAAVERFEKNEDFDPQAI----RAHAE-RFSESRFREKI 350 (351)
T ss_pred H--HHHHHHHHHHHhCcccCHHHH----HHHHH-hcCHHHHHHHh
Confidence 8 999999999999984 34444 44444 59999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-25 Score=241.47 Aligned_cols=223 Identities=23% Similarity=0.326 Sum_probs=180.7
Q ss_pred hhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHH
Q 004760 357 LVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKE 436 (732)
Q Consensus 357 ~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~ 436 (732)
..+.+++.++++|+..... +. ..++... ..+.+++||++.+.+.+...
T Consensus 179 ~~~~~~d~ii~~S~~~~~~----l~---~~~~~~~-----------~ki~vi~~gv~~~~~~~~~~-------------- 226 (407)
T cd04946 179 YLLSSLDAVFPCSEQGRNY----LQ---KRYPAYK-----------EKIKVSYLGVSDPGIISKPS-------------- 226 (407)
T ss_pred HHHhcCCEEEECCHHHHHH----HH---HHCCCcc-----------ccEEEEECCcccccccCCCC--------------
Confidence 3456789999999987543 20 0112111 23479999999887654311
Q ss_pred hCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccc
Q 004760 437 MGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSN 516 (732)
Q Consensus 437 lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~ 516 (732)
.++.+.|+++|++.+.||++.+++|+..+.++.|+.
T Consensus 227 ---~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~----------------------------------------- 262 (407)
T cd04946 227 ---KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSI----------------------------------------- 262 (407)
T ss_pred ---CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCc-----------------------------------------
Confidence 245678999999999999999999999998876641
Q ss_pred ccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHH
Q 004760 517 ELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILE 596 (732)
Q Consensus 517 ~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~ 596 (732)
...+.++|+|++...++.++.
T Consensus 263 ------------------------------------------~l~~~iiG~g~~~~~l~~~~~----------------- 283 (407)
T cd04946 263 ------------------------------------------KIKWTHIGGGPLEDTLKELAE----------------- 283 (407)
T ss_pred ------------------------------------------eEEEEEEeCchHHHHHHHHHH-----------------
Confidence 124567888887776666653
Q ss_pred HHHhcCCCCCcEEEccch--hhHHHHHHH--cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEE
Q 004760 597 FLSQHSNLSKAMLWTPAT--TRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLL 672 (732)
Q Consensus 597 ~l~~~l~l~~~V~f~G~~--~dv~~lysa--ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll 672 (732)
..+..++|.|+|++ +++..+|+. ||++++||. .||+|++++||||||+|||+|+.||..|++.++.+|++
T Consensus 284 ----~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l 357 (407)
T cd04946 284 ----SKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLL 357 (407)
T ss_pred ----hcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEE
Confidence 22566789999987 578899976 789999998 99999999999999999999999999999999999999
Q ss_pred ECCC-CCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 673 HPPG-HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 673 ~~~~-d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
++++ |+ ++++++|..+++|++.+++|+++|++.++++|+++..+++|+
T Consensus 358 ~~~~~~~--~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 358 LSKDPTP--NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred eCCCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9875 55 999999999999999999999999999999999999999885
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=237.25 Aligned_cols=262 Identities=20% Similarity=0.323 Sum_probs=197.0
Q ss_pred cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh------------HhHHHhhhhhccccEEEEecHHhHHHhh
Q 004760 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------------EYFDRAKLVLDRVKLLVFLSESQTKQWL 377 (732)
Q Consensus 310 ~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~------------~~~~~~~~~l~r~~~li~vS~~~~~~~~ 377 (732)
.++|++|+++.....+ .+.......+ .+.++|..+- .++......+.+.+.+++.|+.+...
T Consensus 98 ~~~diii~~~~~~~~~---~~~~~~~~~~-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-- 171 (372)
T cd04949 98 TKPDVFILDRPTLDGQ---ALLNMKKAAK-VVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQD-- 171 (372)
T ss_pred CCCCEEEECCccccch---hHHhccCCce-EEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHH--
Confidence 6899999987665544 1222222222 3334442211 11112223345688899999887443
Q ss_pred hHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCC
Q 004760 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKG 457 (732)
Q Consensus 378 ~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG 457 (732)
+. ..... . ..+.+||||++.+.+.+... .......++++|++.+.||
T Consensus 172 -l~------~~~~~-------~---~~v~~ip~g~~~~~~~~~~~----------------~~~~~~~i~~vgrl~~~K~ 218 (372)
T cd04949 172 -LQ------KQFGN-------Y---NPIYTIPVGSIDPLKLPAQF----------------KQRKPHKIITVARLAPEKQ 218 (372)
T ss_pred -HH------HHhCC-------C---CceEEEcccccChhhcccch----------------hhcCCCeEEEEEccCcccC
Confidence 11 11111 0 11589999999887755321 0134567899999999999
Q ss_pred HHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 458 ~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
++.+|+|+..+.++.|+
T Consensus 219 ~~~li~a~~~l~~~~~~--------------------------------------------------------------- 235 (372)
T cd04949 219 LDQLIKAFAKVVKQVPD--------------------------------------------------------------- 235 (372)
T ss_pred HHHHHHHHHHHHHhCCC---------------------------------------------------------------
Confidence 99999999999887776
Q ss_pred CCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhH
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv 617 (732)
.++.++|.|+....++.++ +.+++.++|.|.|+.+++
T Consensus 236 ----------------------~~l~i~G~g~~~~~~~~~~---------------------~~~~~~~~v~~~g~~~~~ 272 (372)
T cd04949 236 ----------------------ATLDIYGYGDEEEKLKELI---------------------EELGLEDYVFLKGYTRDL 272 (372)
T ss_pred ----------------------cEEEEEEeCchHHHHHHHH---------------------HHcCCcceEEEcCCCCCH
Confidence 2567778887655555444 233788899999999999
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-ChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-GTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSV 696 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-G~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~ 696 (732)
..+|+.||++|+||. .|+||++++|||+||+|||+++.+ |..|++.++.+|++++++|+ ++|+++|..+++|++.
T Consensus 273 ~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~--~~la~~i~~ll~~~~~ 348 (372)
T cd04949 273 DEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDI--EALAEAIIELLNDPKL 348 (372)
T ss_pred HHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcH--HHHHHHHHHHHcCHHH
Confidence 999999999999998 899999999999999999999987 89999999999999999888 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHH
Q 004760 697 RERMAMEGRKKVERMYLKKHMYKKL 721 (732)
Q Consensus 697 r~~m~~~~r~~v~~~ys~~~~~~~~ 721 (732)
+++|++++++.+ ++|+|++++++|
T Consensus 349 ~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 349 LQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 999999999995 569999998864
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=236.39 Aligned_cols=337 Identities=18% Similarity=0.227 Sum_probs=238.8
Q ss_pred eEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch---------------h
Q 004760 244 KFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------F 306 (732)
Q Consensus 244 kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------~ 306 (732)
+|+.|++-+ ++||.|.+++.|++.|.+.||.|.+++..-+.-..-.....|++|+..+.... +
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pll 81 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLL 81 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCccc
Confidence 355555544 78999999999999999999999999965433222223346688876654432 1
Q ss_pred ---hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhh--------hccccEEEEecHHhHHH
Q 004760 307 ---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLV--------LDRVKLLVFLSESQTKQ 375 (732)
Q Consensus 307 ---~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~--------l~r~~~li~vS~~~~~~ 375 (732)
.-+.+..+||.|+++..-..+..+.....| -+.+..-|+.-. +.+..... +..++.+|++|.....
T Consensus 82 r~i~lrE~I~ivhghs~fS~lahe~l~hartMG-lktVfTdHSlfG-fad~~si~~n~ll~~sL~~id~~IcVshtske- 158 (426)
T KOG1111|consen 82 RPILLRERIEIVHGHSPFSYLAHEALMHARTMG-LKTVFTDHSLFG-FADIGSILTNKLLPLSLANIDRIICVSHTSKE- 158 (426)
T ss_pred chhhhhhceEEEecCChHHHHHHHHHHHHHhcC-ceEEEecccccc-ccchhhhhhcceeeeeecCCCcEEEEeecCCC-
Confidence 115689999999887765555554444445 445555543111 11111111 1225666666665311
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCC-EEEEEEecCCC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQD-MLVLSLSSINP 454 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~-~lil~vGri~~ 454 (732)
+.-++.. -..+.+.+|||.+++..|.|.+.+ + +..+ ..++.+||+-+
T Consensus 159 --------ntvlr~~---------L~p~kvsvIPnAv~~~~f~P~~~~-~--------------~S~~i~~ivv~sRLvy 206 (426)
T KOG1111|consen 159 --------NTVLRGA---------LAPAKVSVIPNAVVTHTFTPDAAD-K--------------PSADIITIVVASRLVY 206 (426)
T ss_pred --------ceEEEec---------cCHhHeeeccceeeccccccCccc-c--------------CCCCeeEEEEEeeeee
Confidence 1222211 113456999999999999996542 1 2444 67999999999
Q ss_pred CCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccc
Q 004760 455 GKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRK 534 (732)
Q Consensus 455 ~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 534 (732)
+||.|+|++++.++..+.|+
T Consensus 207 rKGiDll~~iIp~vc~~~p~------------------------------------------------------------ 226 (426)
T KOG1111|consen 207 RKGIDLLLEIIPSVCDKHPE------------------------------------------------------------ 226 (426)
T ss_pred ccchHHHHHHHHHHHhcCCC------------------------------------------------------------
Confidence 99999999999999988887
Q ss_pred cCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch
Q 004760 535 NLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT 614 (732)
Q Consensus 535 n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~ 614 (732)
.+++++|+||.+..++... +.+.+.++|.++|..
T Consensus 227 -------------------------vrfii~GDGPk~i~lee~l---------------------Ek~~l~~rV~~lG~v 260 (426)
T KOG1111|consen 227 -------------------------VRFIIIGDGPKRIDLEEML---------------------EKLFLQDRVVMLGTV 260 (426)
T ss_pred -------------------------eeEEEecCCcccchHHHHH---------------------HHhhccCceEEeccc
Confidence 3577889999877776555 333788999999976
Q ss_pred --hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc
Q 004760 615 --TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK 692 (732)
Q Consensus 615 --~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~ 692 (732)
+++.++|...|+|+.||- .|+|+++++|||+||+|||+|.+||++|++-+. .-. .....+ ++++++++..+.
T Consensus 261 ~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~-~~~~~~--~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 261 PHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MIT-LGEPGP--DDLVGAVEKAIT 334 (426)
T ss_pred chHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-cee-ccCCCh--HHHHHHHHHHHH
Confidence 899999999999999996 999999999999999999999999999999764 222 222333 778888877765
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 693 NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 693 n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
.-.. .-....+++.++|+|+.++++..++|.++..
T Consensus 335 ~~~~---~p~~~h~~v~~~y~w~dVa~rTekvy~r~~~ 369 (426)
T KOG1111|consen 335 KLRT---LPLEFHDRVKKMYSWKDVAERTEKVYDRAAT 369 (426)
T ss_pred Hhcc---CchhHHHHHHHhccHHHHHHHHHHHHHHHhh
Confidence 3211 1233456777899999999999999988764
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-24 Score=242.52 Aligned_cols=324 Identities=17% Similarity=0.122 Sum_probs=222.3
Q ss_pred CCeEEEEeCCC--CCCcHHHHHHHHHHHHHHC-CCEEEEEEeCC--C-CCC------------------hhHH-HhCCc-
Q 004760 242 SRKFILIFHEL--SMTGAPLSMMELATELLSC-GATVSAVVLSK--R-GGL------------------MPEL-ARRKI- 295 (732)
Q Consensus 242 ~~kIllI~h~l--s~gGA~~~~~eLA~~L~~~-G~~V~vv~l~~--~-g~l------------------~~el-~~~gI- 295 (732)
+|.|.+|+... =|||...-=+-=|-+|++. |++|+.|++-- . ..+ ...+ ++.|.
T Consensus 322 ~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~ 401 (794)
T PLN02501 322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFK 401 (794)
T ss_pred CCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCC
Confidence 35666555443 2799776655566688887 79999987421 1 100 1123 23332
Q ss_pred ---EEEEcCCCch--------------hhhhcCccEEEeCCchhhHHHH--HHHHhhcCCCccEEEEEeechhHhHHHhh
Q 004760 296 ---KVLEDRGEPS--------------FKTSMKADLVIAGSAVCATWID--QYITRFPAGGSQVVWWIMENRREYFDRAK 356 (732)
Q Consensus 296 ---~v~~~~~~~~--------------~~~~~k~DlVia~Sav~~~~i~--~~i~~~~~~~~~ivw~i~e~r~~~~~~~~ 356 (732)
++..-++.-. ....++||+||+.+-..-.|.. ...+... + + ++..+|.+...|.....
T Consensus 402 ~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl-~-P-VVasyHTny~eYl~~y~ 478 (794)
T PLN02501 402 ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-N-H-VVGVVHTNYLEYIKREK 478 (794)
T ss_pred CCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHc-C-C-eEEEEeCCcHHHHhHhc
Confidence 2222222111 3348899999999988777773 3333333 2 3 77778877777766432
Q ss_pred h-------------hhcc--ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeec--CCCCCCCCCc
Q 004760 357 L-------------VLDR--VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFT--CSLNTPTSSP 419 (732)
Q Consensus 357 ~-------------~l~r--~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIp--ngvd~~~f~~ 419 (732)
. ++.+ ++.++..|.... . + + . .+|+ ||+|+..|.|
T Consensus 479 ~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq-~-----------L---~--------~-----~vI~nVnGVDte~F~P 530 (794)
T PLN02501 479 NGALQAFFVKHINNWVTRAYCHKVLRLSAATQ-D-----------L---P--------K-----SVICNVHGVNPKFLKI 530 (794)
T ss_pred chhHHHHHHHHHHHHHHHhhCCEEEcCCHHHH-H-----------h---c--------c-----cceeecccccccccCC
Confidence 1 1111 244455543321 0 1 1 0 1222 6999999988
Q ss_pred hhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccc
Q 004760 420 EKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHL 499 (732)
Q Consensus 420 ~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l 499 (732)
..... .+.++|+......++++||+.+.||++.||+|++.+..+.++
T Consensus 531 ~~r~~--------~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pn------------------------- 577 (794)
T PLN02501 531 GEKVA--------EERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDG------------------------- 577 (794)
T ss_pred cchhH--------HHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCC-------------------------
Confidence 65421 224667765445688999999999999999999988665443
Q ss_pred cccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhh
Q 004760 500 RGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIG 579 (732)
Q Consensus 500 ~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~ 579 (732)
.+++++|+|+.++.++.++.
T Consensus 578 ------------------------------------------------------------vrLvIVGDGP~reeLe~la~ 597 (794)
T PLN02501 578 ------------------------------------------------------------FNLDVFGNGEDAHEVQRAAK 597 (794)
T ss_pred ------------------------------------------------------------eEEEEEcCCccHHHHHHHHH
Confidence 36889999998888877764
Q ss_pred ccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 580 SVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 580 ~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
.. ++ +|.|+|..+++..+|+.+|+||+||. .|+||++++||||||+|||+++++|
T Consensus 598 eL---------------------gL--~V~FLG~~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG 652 (794)
T PLN02501 598 RL---------------------DL--NLNFLKGRDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPS 652 (794)
T ss_pred Hc---------------------CC--EEEecCCCCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCC
Confidence 33 44 48999999889999999999999998 9999999999999999999999998
Q ss_pred hhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 660 TKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 660 ~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
. +++.++.+|+++ +|. ++++++|.+++.++..+..+.+ ...|||+.+++++++.-
T Consensus 653 ~-e~V~~g~nGll~--~D~--EafAeAI~~LLsd~~~rl~~~a------~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 653 N-EFFRSFPNCLTY--KTS--EDFVAKVKEALANEPQPLTPEQ------RYNLSWEAATQRFMEYS 707 (794)
T ss_pred C-ceEeecCCeEec--CCH--HHHHHHHHHHHhCchhhhHHHH------HhhCCHHHHHHHHHHhh
Confidence 5 457777788765 555 9999999999998875544332 23699999999998764
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=227.91 Aligned_cols=220 Identities=18% Similarity=0.114 Sum_probs=160.3
Q ss_pred hccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhC
Q 004760 359 LDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG 438 (732)
Q Consensus 359 l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lg 438 (732)
..+++.++++|+..... . .+.+... ...+.+||||+|.+.|.+....
T Consensus 92 ~~~ad~ii~~S~~~~~~----l----~~~g~~~----------~~~i~vIpNGVd~~~f~~~~~~--------------- 138 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNA----F----YTSGLKI----------PQPIYVIPHNLNPRMFEYKPKE--------------- 138 (331)
T ss_pred hccCCEEEECCHHHHHH----H----HHcCCCC----------CCCEEEECCCCCHHHcCCCccc---------------
Confidence 35689999999997443 1 1122211 1235899999999888654321
Q ss_pred CCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccccc
Q 004760 439 LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNEL 518 (732)
Q Consensus 439 l~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~ 518 (732)
....++++++|++.+.||++.||+|++.+.++.++
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~-------------------------------------------- 173 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYD-------------------------------------------- 173 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCC--------------------------------------------
Confidence 12456777888999999999999999999776554
Q ss_pred ccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHH
Q 004760 519 SVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFL 598 (732)
Q Consensus 519 ~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l 598 (732)
.+++++|.+.+...+.
T Consensus 174 -----------------------------------------~~llivG~~~~~~~l~----------------------- 189 (331)
T PHA01630 174 -----------------------------------------FYFLIKSSNMLDPRLF----------------------- 189 (331)
T ss_pred -----------------------------------------EEEEEEeCcccchhhc-----------------------
Confidence 2455566443221110
Q ss_pred HhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCC--
Q 004760 599 SQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG-- 676 (732)
Q Consensus 599 ~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~-- 676 (732)
++.. +......+++..+|+.||++|+||+ .|+||++++||||||+|||+|+.||..|++.++.+|++++.+
T Consensus 190 ----~~~~-~~~~v~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~ 262 (331)
T PHA01630 190 ----GLNG-VKTPLPDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRK 262 (331)
T ss_pred ----cccc-eeccCCHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeeccc
Confidence 1111 1111234899999999999999998 899999999999999999999999999999999898887643
Q ss_pred ---------------CCcHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 677 ---------------HPGAQVLAQNLRYLLKNP--SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 677 ---------------d~~~e~La~aL~~LL~n~--~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
+++.+++++++..++.|+ +.++++..++.+.+.++|+|+.+++++.++|++
T Consensus 263 ~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 263 PKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 223388999999988874 445555555566667789999999999999975
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-23 Score=228.52 Aligned_cols=311 Identities=15% Similarity=0.085 Sum_probs=203.4
Q ss_pred CCCCcHHHHHHHHHHHHHHCCC-EEEEEEeCCCCCChhHHHhCCcEEEEcCCCch---------------h---------
Q 004760 252 LSMTGAPLSMMELATELLSCGA-TVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------F--------- 306 (732)
Q Consensus 252 ls~gGA~~~~~eLA~~L~~~G~-~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------~--------- 306 (732)
+...|++..|.+++..|.++|+ +|++++....+...+.....||+++..+.... +
T Consensus 12 ~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (371)
T PLN02275 12 LGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAIQFLMLL 91 (371)
T ss_pred ecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4778888999999999999885 79999976666665666667899988852111 0
Q ss_pred ----hhhcCccEEEeCCchh-hHHHHHHHHhhcCCCccEEEEEeechhH--------------hHHH-hhhhhccccEEE
Q 004760 307 ----KTSMKADLVIAGSAVC-ATWIDQYITRFPAGGSQVVWWIMENRRE--------------YFDR-AKLVLDRVKLLV 366 (732)
Q Consensus 307 ----~~~~k~DlVia~Sav~-~~~i~~~i~~~~~~~~~ivw~i~e~r~~--------------~~~~-~~~~l~r~~~li 366 (732)
.+..+||+||+++... ...+...+.....+.+.++ ++|..... .+.. .+......+.++
T Consensus 92 ~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~-~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii 170 (371)
T PLN02275 92 WFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVI-DWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHL 170 (371)
T ss_pred HHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEE-EcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEE
Confidence 2357999999976332 1122333444444555343 34321100 1111 112233478999
Q ss_pred EecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEE
Q 004760 367 FLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLV 446 (732)
Q Consensus 367 ~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~li 446 (732)
++|+..... . .+ .... + +.+|||+. .+.|.+....+ .+. .++..++
T Consensus 171 ~~S~~~~~~----l----~~-~~g~-------~-----i~vi~n~~-~~~f~~~~~~~-----------~~~-~~~~~~i 216 (371)
T PLN02275 171 CVTKAMQHE----L----DQ-NWGI-------R-----ATVLYDQP-PEFFRPASLEI-----------RLR-PNRPALV 216 (371)
T ss_pred ECCHHHHHH----H----HH-hcCC-------C-----eEEECCCC-HHHcCcCCchh-----------ccc-CCCcEEE
Confidence 999986442 1 11 1111 1 37899984 45665432210 011 1234577
Q ss_pred EEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhh
Q 004760 447 LSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFT 526 (732)
Q Consensus 447 l~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~ 526 (732)
+++|++.+.||++.+++|+..+..+.... +++ . .++
T Consensus 217 ~~~grl~~~k~~~~li~a~~~l~~~~~~~--~~~-------------------~--~~~--------------------- 252 (371)
T PLN02275 217 VSSTSWTPDEDFGILLEAAVMYDRRVAAR--LNE-------------------S--DSA--------------------- 252 (371)
T ss_pred EEeCceeccCCHHHHHHHHHHHHhhhhhc--ccc-------------------c--ccc---------------------
Confidence 89999999999999999999875432210 000 0 000
Q ss_pred ccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCC
Q 004760 527 QLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSK 606 (732)
Q Consensus 527 ~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~ 606 (732)
. ..-.-.+..+++++|+|+++++++.++... ++++
T Consensus 253 -------------------~-----~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~---------------------~l~~ 287 (371)
T PLN02275 253 -------------------S-----GKQSLYPRLLFIITGKGPQKAMYEEKISRL---------------------NLRH 287 (371)
T ss_pred -------------------c-----cccccCCCeEEEEEeCCCCHHHHHHHHHHc---------------------CCCc
Confidence 0 000001235799999999888777666433 6765
Q ss_pred cEEEcc-c--hhhHHHHHHHcCEEEEccC-CCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHH
Q 004760 607 AMLWTP-A--TTRVASLYSAADVYVINSQ-GLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 607 ~V~f~G-~--~~dv~~lysaADv~V~pS~-~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
+.|.+ + .++++.+|++||++|+|+. ...|++|++++||||||+|||+++.||..|+|+++.+|++++ ++ ++
T Consensus 288 -v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~--~~ 362 (371)
T PLN02275 288 -VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SS--SE 362 (371)
T ss_pred -eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CH--HH
Confidence 77654 3 4899999999999998632 125899999999999999999999999999999999999997 44 89
Q ss_pred HHHHHHHHh
Q 004760 683 LAQNLRYLL 691 (732)
Q Consensus 683 La~aL~~LL 691 (732)
|+++|.+++
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998874
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-24 Score=240.70 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=216.2
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhH------HHh---HHhHHH
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMR------EKR---NLLRDS 432 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~------ekr---~~~r~~ 432 (732)
++.++++|+..... | ..-++.+| + .|||||+|...|.+.... .|. ...+..
T Consensus 227 Ad~fttVS~it~~E----~---~~Ll~~~p--------d-----~ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~ 286 (590)
T cd03793 227 AHVFTTVSEITAYE----A---EHLLKRKP--------D-----VVLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGH 286 (590)
T ss_pred CCEEEECChHHHHH----H---HHHhCCCC--------C-----EEeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHH
Confidence 78899999998543 2 11135444 2 399999999998764311 111 113456
Q ss_pred HHHHhCCCCCCEEEEE-EecCCC-CCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccccccccccc
Q 004760 433 VRKEMGLTDQDMLVLS-LSSINP-GKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDD 510 (732)
Q Consensus 433 ~R~~lgl~~~~~lil~-vGri~~-~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~ 510 (732)
++..++++.+++++++ +||+.. +||+|.||+|+.++........+++...+++|.+++++-+..-.|+|+++.+++.+
T Consensus 287 ~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~ 366 (590)
T cd03793 287 FYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRD 366 (590)
T ss_pred HhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHH
Confidence 7888899878877766 899998 99999999999999887666555677888999999998888888999998776666
Q ss_pred ccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhh
Q 004760 511 VGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPY 590 (732)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y 590 (732)
....+-..+.-+-+...+.-- .|+.-+.+...|.+.+ ++.++.- ++..+...+.+.-.....++.
T Consensus 367 ~~~~i~~~i~~~~~~~~l~~~------~~~~~~~~~~~~~~~~------kr~~~~~---~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 367 TVNSVKEKIGKRLFEAALKGK------LPDLEELLDKEDKVML------KRRIFAL---QRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHHHHHHHhhhhhhhHhhccC------CCChhhhcchhhHHHH------HHHHHhh---ccCCCCCeeeecCCcCccCHH
Confidence 665554444444333333100 1111122222222211 1111111 111222223322222334444
Q ss_pred HHHHHHHHHhcCCCCC--cEEEccch---------hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 591 VKEILEFLSQHSNLSK--AMLWTPAT---------TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 591 ~k~il~~l~~~l~l~~--~V~f~G~~---------~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
+..+.+.--.+ +-.+ +|+|++.. .+..++|++||++|+||. +|+||++++||||||+|||+|+.+|
T Consensus 432 l~~~r~~~l~N-~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~~g 508 (590)
T cd03793 432 LNHIRRIQLFN-SPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNLSG 508 (590)
T ss_pred HHHHHHhcCcC-CCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccCcc
Confidence 44443321111 1133 36777632 368999999999999998 9999999999999999999999999
Q ss_pred h----hhhhccC-ceEEEECCCC-----CcHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHh
Q 004760 660 T----KEIVEHN-VTGLLHPPGH-----PGAQVLAQNLRYLLKNPSVRERMAMEGR-KKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 660 ~----~EiVe~g-~~Gll~~~~d-----~~~e~La~aL~~LL~n~~~r~~m~~~~r-~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+ .|++.++ ..|+++.+.+ .++++|+++|.++++. +.++++.++++ ++..+.|+|+++++.|.+.+..+
T Consensus 509 f~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~A 587 (590)
T cd03793 509 FGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587 (590)
T ss_pred hhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 8 5666554 3566665221 1338999999999854 56666666654 34556799999999999999988
Q ss_pred hc
Q 004760 729 MK 730 (732)
Q Consensus 729 l~ 730 (732)
++
T Consensus 588 l~ 589 (590)
T cd03793 588 LS 589 (590)
T ss_pred hh
Confidence 75
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-22 Score=215.72 Aligned_cols=322 Identities=15% Similarity=0.074 Sum_probs=216.1
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc--------------h---
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP--------------S--- 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~--------------~--- 305 (732)
.||+++.... ||++..+++||++|.+.||+|.+++... +.....++..|++++...... .
T Consensus 2 ~~i~i~~~g~--gG~~~~~~~la~~L~~~g~ev~vv~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (357)
T PRK00726 2 KKILLAGGGT--GGHVFPALALAEELKKRGWEVLYLGTAR-GMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLK 78 (357)
T ss_pred cEEEEEcCcc--hHhhhHHHHHHHHHHhCCCEEEEEECCC-chhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHH
Confidence 4666665444 6999999999999999999999998533 221223344688877654311 0
Q ss_pred -------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhh
Q 004760 306 -------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (732)
Q Consensus 306 -------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~ 378 (732)
+.+..+||+||+++... .+. ..++....+.+ ++++.+........ +....+.+.+++.++...
T Consensus 79 ~~~~~~~~ik~~~pDvv~~~~~~~-~~~-~~~~~~~~~~p-~v~~~~~~~~~~~~--r~~~~~~d~ii~~~~~~~----- 148 (357)
T PRK00726 79 GVLQARKILKRFKPDVVVGFGGYV-SGP-GGLAARLLGIP-LVIHEQNAVPGLAN--KLLARFAKKVATAFPGAF----- 148 (357)
T ss_pred HHHHHHHHHHhcCCCEEEECCCcc-hhH-HHHHHHHcCCC-EEEEcCCCCccHHH--HHHHHHhchheECchhhh-----
Confidence 23367899999997433 222 23334444555 44333211111111 111223555665554320
Q ss_pred HHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCH
Q 004760 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQ 458 (732)
Q Consensus 379 ~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~ 458 (732)
. . .+ ...+.+++||++.+.+.+... +++++++++.++|+++|+....|++
T Consensus 149 -~-----~---~~----------~~~i~vi~n~v~~~~~~~~~~-----------~~~~~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 -P-----E---FF----------KPKAVVTGNPVREEILALAAP-----------PARLAGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred -h-----c---cC----------CCCEEEECCCCChHhhcccch-----------hhhccCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11 123589999999876643221 2346777777888899988888887
Q ss_pred HHHH-HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 459 LLLV-ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 459 d~LL-eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
..++ +|++.+... +
T Consensus 199 ~~~l~~a~~~~~~~-~---------------------------------------------------------------- 213 (357)
T PRK00726 199 NEAVPEALALLPEA-L---------------------------------------------------------------- 213 (357)
T ss_pred HHHHHHHHHHhhhC-c----------------------------------------------------------------
Confidence 5555 888776321 1
Q ss_pred CCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhH
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv 617 (732)
..++++|+|+... + .+.+ + +++. |.|+|+++++
T Consensus 214 ----------------------~~~~~~G~g~~~~-~--------------------~~~~-~-~~~~--v~~~g~~~~~ 246 (357)
T PRK00726 214 ----------------------QVIHQTGKGDLEE-V--------------------RAAY-A-AGIN--AEVVPFIDDM 246 (357)
T ss_pred ----------------------EEEEEcCCCcHHH-H--------------------HHHh-h-cCCc--EEEeehHhhH
Confidence 1345677775422 2 1222 2 3553 9999999999
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC--------hhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG--------TKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG--------~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+.+|++||+++++| .+.+++|||+||+|||++..++ ..+.+.+..+|+++++.|.++++|+++|++
T Consensus 247 ~~~~~~~d~~i~~~------g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ 320 (357)
T PRK00726 247 AAAYAAADLVICRA------GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE 320 (357)
T ss_pred HHHHHhCCEEEECC------CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH
Confidence 99999999999866 2689999999999999987642 245676677899998887445999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++|++.+++|++++++.++ .+..+.+++.+.++++
T Consensus 321 ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 321 LLSDPERLEAMAEAARALGK-PDAAERLADLIEELAR 356 (357)
T ss_pred HHcCHHHHHHHHHHHHhcCC-cCHHHHHHHHHHHHhh
Confidence 99999999999999998864 5999999999988775
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-21 Score=214.56 Aligned_cols=351 Identities=17% Similarity=0.217 Sum_probs=227.2
Q ss_pred EEeCCCCCCcHHHHHHHHHHHHHHCCCEEEE--EEeCCCCC-ChhHHHhCCcEEEEcCCCch-----hhhhcCccEEEeC
Q 004760 247 LIFHELSMTGAPLSMMELATELLSCGATVSA--VVLSKRGG-LMPELARRKIKVLEDRGEPS-----FKTSMKADLVIAG 318 (732)
Q Consensus 247 lI~h~ls~gGA~~~~~eLA~~L~~~G~~V~v--v~l~~~g~-l~~el~~~gI~v~~~~~~~~-----~~~~~k~DlVia~ 318 (732)
+=+|..|.| -..++..|+++|.+++.++.+ .+.+..|. +..+....++.+...+.+.. +.+..+||+||++
T Consensus 53 iW~Ha~s~G-e~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~ 131 (425)
T PRK05749 53 IWFHAVSVG-ETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIM 131 (425)
T ss_pred EEEEeCCHH-HHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEE
Confidence 558999988 778899999999998755444 33223332 12222233566666665543 5557899999876
Q ss_pred CchhhHHHHHHHHhhcCCCccEEEEEeechhH-----hH-HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCc
Q 004760 319 SAVCATWIDQYITRFPAGGSQVVWWIMENRRE-----YF-DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPA 392 (732)
Q Consensus 319 Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~-----~~-~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~ 392 (732)
.. ..|...+......+.+.+++........ .+ ...+..+.+++.+++.|+..... . ..++..+
T Consensus 132 ~~--~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~----l----~~~g~~~- 200 (425)
T PRK05749 132 ET--ELWPNLIAELKRRGIPLVLANARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAER----F----LALGAKN- 200 (425)
T ss_pred ec--chhHHHHHHHHHCCCCEEEEeccCChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHH----H----HHcCCCC-
Confidence 43 2343333333445566554432111111 11 12234556689999999997543 2 2233322
Q ss_pred cccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhC
Q 004760 393 VVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQE 472 (732)
Q Consensus 393 ~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~ 472 (732)
+ +.+++|. +.+.+.+....++ +..+|++++ .++++++++|+. .|+.+.+++|++.+.++.
T Consensus 201 ------~-----i~vi~n~-~~d~~~~~~~~~~----~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~ 260 (425)
T PRK05749 201 ------E-----VTVTGNL-KFDIEVPPELAAR----AATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQF 260 (425)
T ss_pred ------C-----cEecccc-cccCCCChhhHHH----HHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHhC
Confidence 1 3577774 3333222111111 245677777 355677777763 688999999999987665
Q ss_pred CCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccc
Q 004760 473 PSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVS 552 (732)
Q Consensus 473 p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~ 552 (732)
|+
T Consensus 261 ~~------------------------------------------------------------------------------ 262 (425)
T PRK05749 261 PN------------------------------------------------------------------------------ 262 (425)
T ss_pred CC------------------------------------------------------------------------------
Confidence 54
Q ss_pred cCCcccceeEEeccCchhh-hhHhhhhhccCCCCCChhhHHHHHHHHH-hcCCCCCcEEEccchhhHHHHHHHcCEEEE-
Q 004760 553 FGSGHLRRKVLSKSDGKQQ-QALKILIGSVGSKSNKVPYVKEILEFLS-QHSNLSKAMLWTPATTRVASLYSAADVYVI- 629 (732)
Q Consensus 553 iG~~~~~~~LlivG~G~~~-~~Lk~li~~~G~~~~~~~y~k~il~~l~-~~l~l~~~V~f~G~~~dv~~lysaADv~V~- 629 (732)
.+++++|+|+++ ++++.++...|-.. ..... ....-...|.+.+..+++..+|+.||++++
T Consensus 263 -------~~liivG~g~~r~~~l~~~~~~~gl~~---------~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~ 326 (425)
T PRK05749 263 -------LLLILVPRHPERFKEVEELLKKAGLSY---------VRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG 326 (425)
T ss_pred -------cEEEEcCCChhhHHHHHHHHHhCCCcE---------EEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC
Confidence 357889999876 66776665443100 00000 000011356777777899999999999666
Q ss_pred ccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccC-ceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 630 NSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHN-VTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKK 707 (732)
Q Consensus 630 pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g-~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~ 707 (732)
+|. .|++|.+++||||||+|||+++. ++..|+++.. .+|++++++|. ++|+++|..+++|++.+++|++++++.
T Consensus 327 ~S~--~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~--~~La~~l~~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 327 GSL--VKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDA--EDLAKAVTYLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred CCc--CCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCH--HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 564 79999999999999999999865 6677766542 46788888887 999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHhhc
Q 004760 708 VERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 708 v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++++ ....++++++|.+.+.
T Consensus 403 ~~~~---~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 403 LKQN---QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHhC---ccHHHHHHHHHHHhcc
Confidence 9875 4677888888877664
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-22 Score=216.07 Aligned_cols=226 Identities=14% Similarity=0.151 Sum_probs=163.4
Q ss_pred hhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHH
Q 004760 355 AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVR 434 (732)
Q Consensus 355 ~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R 434 (732)
...++.+-..++.+|+..... . .+.+... . ..|++|+|++.|.+... ....+|
T Consensus 86 y~~~m~~~~~vIavS~~t~~~----L----~~~G~~~--------~-----i~I~~GVD~~~f~p~~~------~~~~~r 138 (335)
T PHA01633 86 VNKYLLQDVKFIPNSKFSAEN----L----QEVGLQV--------D-----LPVFHGINFKIVENAEK------LVPQLK 138 (335)
T ss_pred HHHHHhcCCEEEeCCHHHHHH----H----HHhCCCC--------c-----eeeeCCCChhhcCccch------hhHHHH
Confidence 334455556789999987543 1 2233332 1 24778999999987542 113456
Q ss_pred HHhCCC-CCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccC
Q 004760 435 KEMGLT-DQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGL 513 (732)
Q Consensus 435 ~~lgl~-~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~ 513 (732)
++++.. .+.++|+++||+.++||++.|++|++.+.++.|+.
T Consensus 139 ~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~-------------------------------------- 180 (335)
T PHA01633 139 QKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDI-------------------------------------- 180 (335)
T ss_pred HHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCc--------------------------------------
Confidence 666643 35678999999999999999999999998776641
Q ss_pred cccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHH
Q 004760 514 SSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKE 593 (732)
Q Consensus 514 ~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~ 593 (732)
....+++++|++ .+
T Consensus 181 -------------------------------------------~~~i~l~ivG~~----~~------------------- 194 (335)
T PHA01633 181 -------------------------------------------AKKIHFFVISHK----QF------------------- 194 (335)
T ss_pred -------------------------------------------cccEEEEEEcHH----HH-------------------
Confidence 001234444421 01
Q ss_pred HHHHHHhcCCCCCcEEEcc---c--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--
Q 004760 594 ILEFLSQHSNLSKAMLWTP---A--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH-- 666 (732)
Q Consensus 594 il~~l~~~l~l~~~V~f~G---~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~-- 666 (732)
+.++++++|.|+| . .+++..+|++||+||+||. .|+||++++||||||+|||+++.+|+.|++.+
T Consensus 195 ------~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~ 266 (335)
T PHA01633 195 ------TQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQW 266 (335)
T ss_pred ------HHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeecCCcc
Confidence 1226678899985 3 4789999999999999998 99999999999999999999999999987542
Q ss_pred ----------------CceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 667 ----------------NVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 667 ----------------g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
+.+|++++..|+ ++|+++|..+++..+ +..+++++++.++ .|+|+.++++|++
T Consensus 267 ~~Li~~~~v~~~~~~~~g~g~~~~~~d~--~~la~ai~~~~~~~~-~~~~~~~~~~~a~-~f~~~~~~~~~~~ 335 (335)
T PHA01633 267 NLLIKSSKVEEYYDKEHGQKWKIHKFQI--EDMANAIILAFELQD-REERSMKLKELAK-KYDIRNLYTRFLE 335 (335)
T ss_pred ceeeCCCCHHHhcCcccCceeeecCCCH--HHHHHHHHHHHhccC-hhhhhHHHHHHHH-hcCHHHHHHHhhC
Confidence 235677777777 999999999855432 3344677777776 5999999999864
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=208.47 Aligned_cols=312 Identities=15% Similarity=0.105 Sum_probs=206.6
Q ss_pred EeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc-----------------------
Q 004760 248 IFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP----------------------- 304 (732)
Q Consensus 248 I~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~----------------------- 304 (732)
+++..+.||+...+.+||++|.++||+|.+++... +.....+...|+++...+...
T Consensus 3 ~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (350)
T cd03785 3 LIAGGGTGGHIFPALALAEELRERGAEVLFLGTKR-GLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVLQA 81 (350)
T ss_pred EEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCC-cchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHHHH
Confidence 45566778999999999999999999999998543 322223333567766543321
Q ss_pred -hhhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhh-hccccEEEEecHHhHHHhhhHHHh
Q 004760 305 -SFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLV-LDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 305 -~~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~-l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
.+.++.+||+||+++.... +...++....+.+.+++ .+. .+....... ....+.+++.++....
T Consensus 82 ~~~i~~~~pDvI~~~~~~~~--~~~~~~a~~~~~p~v~~-~~~---~~~~~~~~~~~~~~~~vi~~s~~~~~-------- 147 (350)
T cd03785 82 RKILKKFKPDVVVGFGGYVS--GPVGLAAKLLGIPLVIH-EQN---AVPGLANRLLARFADRVALSFPETAK-------- 147 (350)
T ss_pred HHHHHhcCCCEEEECCCCcc--hHHHHHHHHhCCCEEEE-cCC---CCccHHHHHHHHhhCEEEEcchhhhh--------
Confidence 0223779999999864332 22234444555554332 211 111111112 2236777777776422
Q ss_pred hhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHH-HH
Q 004760 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQL-LL 461 (732)
Q Consensus 383 e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d-~L 461 (732)
. ..+ ..+.+|+||+|.+.+.+.. . |++++++++.++++++|+....|+.+ ++
T Consensus 148 ----~-~~~-----------~~~~~i~n~v~~~~~~~~~----------~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l 200 (350)
T cd03785 148 ----Y-FPK-----------DKAVVTGNPVREEILALDR----------E-RARLGLRPGKPTLLVFGGSQGARAINEAV 200 (350)
T ss_pred ----c-CCC-----------CcEEEECCCCchHHhhhhh----------h-HHhcCCCCCCeEEEEECCcHhHHHHHHHH
Confidence 1 111 1347899999987664321 1 67788888888888888777777765 45
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
++|+..+.+ ++
T Consensus 201 ~~a~~~l~~--~~------------------------------------------------------------------- 211 (350)
T cd03785 201 PEALAELLR--KR------------------------------------------------------------------- 211 (350)
T ss_pred HHHHHHhhc--cC-------------------------------------------------------------------
Confidence 688877641 11
Q ss_pred ccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHH
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLY 621 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~ly 621 (732)
...++++|.| ..+.++..+. . +.++|+|.|+++++.++|
T Consensus 212 -----------------~~~~~i~G~g-~~~~l~~~~~---------------------~--~~~~v~~~g~~~~~~~~l 250 (350)
T cd03785 212 -----------------LQVIHQTGKG-DLEEVKKAYE---------------------E--LGVNYEVFPFIDDMAAAY 250 (350)
T ss_pred -----------------eEEEEEcCCc-cHHHHHHHHh---------------------c--cCCCeEEeehhhhHHHHH
Confidence 0124456776 3344443331 1 146899999999999999
Q ss_pred HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC--------hhhhhccCceEEEECCCCCcHHHHHHHHHHHhcC
Q 004760 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG--------TKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKN 693 (732)
Q Consensus 622 saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG--------~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n 693 (732)
+.||++|++| . +++++|||++|+|||+++.++ ..+.+.+..+|++++.++.+.++|+++|..+++|
T Consensus 251 ~~ad~~v~~s---g---~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 251 AAADLVISRA---G---ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred HhcCEEEECC---C---HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 9999999766 2 689999999999999987654 2466666679999987732339999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHH
Q 004760 694 PSVRERMAMEGRKKVERMYLKKHMY 718 (732)
Q Consensus 694 ~~~r~~m~~~~r~~v~~~ys~~~~~ 718 (732)
++.+++|+.++++.++ .+..++++
T Consensus 325 ~~~~~~~~~~~~~~~~-~~~~~~i~ 348 (350)
T cd03785 325 PERLKAMAEAARSLAR-PDAAERIA 348 (350)
T ss_pred HHHHHHHHHHHHhcCC-CCHHHHHH
Confidence 9999999999998765 46666554
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-22 Score=189.88 Aligned_cols=168 Identities=31% Similarity=0.607 Sum_probs=143.5
Q ss_pred HHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHh-CCCCchhhhhhcccccccccccccccccccccccccc
Q 004760 430 RDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQ-EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMS 508 (732)
Q Consensus 430 r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~-~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~ 508 (732)
|+..|...+.++++.+|+++|++.+.||++.+++|+..+.++ .++
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~---------------------------------- 47 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN---------------------------------- 47 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----------------------------------
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----------------------------------
Confidence 467888999999999999999999999999999999999764 333
Q ss_pred ccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCCh
Q 004760 509 DDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKV 588 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~ 588 (732)
..++++|.+.....++..+
T Consensus 48 ---------------------------------------------------~~l~i~G~~~~~~~~~~~~---------- 66 (172)
T PF00534_consen 48 ---------------------------------------------------YKLVIVGDGEYKKELKNLI---------- 66 (172)
T ss_dssp ---------------------------------------------------EEEEEESHCCHHHHHHHHH----------
T ss_pred ---------------------------------------------------eEEEEEccccccccccccc----------
Confidence 3567777555444444444
Q ss_pred hhHHHHHHHHHhcCCCCCcEEEccchh--hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc
Q 004760 589 PYVKEILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH 666 (732)
Q Consensus 589 ~y~k~il~~l~~~l~l~~~V~f~G~~~--dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~ 666 (732)
+.+++.+++.|.|... ++..+|+.||++|+||. .|+||++++|||+||+|||+++.|+..|++.+
T Consensus 67 -----------~~~~~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 67 -----------EKLNLKENIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIIND 133 (172)
T ss_dssp -----------HHTTCGTTEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGT
T ss_pred -----------ccccccccccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeecc
Confidence 3337888999999885 99999999999999998 89999999999999999999999999999999
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 667 NVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKK 707 (732)
Q Consensus 667 g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~ 707 (732)
+.+|+++++.++ ++++++|.+++++++.++.|+++++++
T Consensus 134 ~~~g~~~~~~~~--~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 134 GVNGFLFDPNDI--EELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp TTSEEEESTTSH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCH--HHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 999999999977 999999999999999999999999864
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-21 Score=215.24 Aligned_cols=305 Identities=15% Similarity=0.138 Sum_probs=195.6
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeec--hhHhHHH------hhhhhccccEEEEecHHhHHHhhhHHHh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMEN--RREYFDR------AKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~--r~~~~~~------~~~~l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
..|+|+.|..+.. .++.++..... ...+.|..|-. -.+.|.. .-..+...+.+.|.+..........|..
T Consensus 131 ~~d~iwihDyhl~-llp~~lr~~~~-~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~ 208 (460)
T cd03788 131 PGDLVWVHDYHLL-LLPQMLRERGP-DARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSR 208 (460)
T ss_pred CCCEEEEeChhhh-HHHHHHHhhCC-CCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHH
Confidence 6799988865321 23344432222 23466666521 1122210 1112223788888887654444444421
Q ss_pred hhhhccCCCcc-ccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHH
Q 004760 383 EKLKLRSQPAV-VPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 383 e~i~l~~~~~~-v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~L 461 (732)
. ++..... ..+........+.+||||+|++.|.+....+. .+..+++..+...+.++|+++||+.+.||++.+
T Consensus 209 ~---l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~l 282 (460)
T cd03788 209 L---LGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPE---VQERAAELRERLGGRKLIVGVDRLDYSKGIPER 282 (460)
T ss_pred H---cCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCch---hHHHHHHHHHhcCCCEEEEEecCccccCCHHHH
Confidence 1 1111100 00111222345789999999998865432111 223344445666678899999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
|+|++.+.++.|+. +
T Consensus 283 l~A~~~ll~~~p~~------------------------~----------------------------------------- 297 (460)
T cd03788 283 LLAFERLLERYPEW------------------------R----------------------------------------- 297 (460)
T ss_pred HHHHHHHHHhChhh------------------------c-----------------------------------------
Confidence 99999998887751 0
Q ss_pred ccccCCCCccccCCcccceeEEeccC-----chhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCC---CCCcEEEccc
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSD-----GKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSN---LSKAMLWTPA 613 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~-----G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~---l~~~V~f~G~ 613 (732)
.+..|+++|. |++.+.++..+ +++...+...++ ....+.+.|.
T Consensus 298 ----------------~~v~Lv~vg~~~~g~~~~~~~l~~~l-------------~~~v~~in~~~g~~~~~~v~~~~g~ 348 (460)
T cd03788 298 ----------------GKVVLVQIAVPSRTDVPEYQELRREV-------------EELVGRINGKFGTLDWTPVRYLYRS 348 (460)
T ss_pred ----------------CCEEEEEEccCCCcCcHHHHHHHHHH-------------HHHHHHHHhccCCCCceeEEEEeCC
Confidence 1123444543 33333333222 222222222222 2233344564
Q ss_pred --hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCC----EEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHH
Q 004760 614 --TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP----VLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNL 687 (732)
Q Consensus 614 --~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlP----VI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL 687 (732)
.+++..+|++||++|+||. .||||++++||||||+| ||+|+.+|..+. +.+|+++++.|+ +++|++|
T Consensus 349 v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~--~~la~ai 421 (460)
T cd03788 349 LPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDI--DEVADAI 421 (460)
T ss_pred CCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCH--HHHHHHH
Confidence 5899999999999999998 99999999999999999 999999888877 357999999998 9999999
Q ss_pred HHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 688 RYLLKNP-SVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 688 ~~LL~n~-~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
..+++++ +.++.+++++++.+. .|+++.+++++++-+
T Consensus 422 ~~~l~~~~~e~~~~~~~~~~~v~-~~~~~~w~~~~l~~l 459 (460)
T cd03788 422 HRALTMPLEERRERHRKLREYVR-THDVQAWANSFLDDL 459 (460)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHhh
Confidence 9999855 778888888888886 599999999998654
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=199.66 Aligned_cols=310 Identities=19% Similarity=0.132 Sum_probs=198.5
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH-HhCCcEEEEcCCCc--------------h---
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEP--------------S--- 305 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el-~~~gI~v~~~~~~~--------------~--- 305 (732)
||+++..+.+ |......+||++|.+.||+|++++. ..+ ....+ ...|+++....... .
T Consensus 2 ~i~~~~g~~~--g~~~~~~~La~~L~~~g~eV~vv~~-~~~-~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~ 77 (348)
T TIGR01133 2 KVVLAAGGTG--GHIFPALAVAEELIKRGVEVLWLGT-KRG-LEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLK 77 (348)
T ss_pred eEEEEeCccH--HHHhHHHHHHHHHHhCCCEEEEEeC-CCc-chhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHH
Confidence 6777766554 5555778999999999999999973 222 22233 34688776554321 0
Q ss_pred -------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHh-hhhhccccEEEEecHHhHHHhh
Q 004760 306 -------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRA-KLVLDRVKLLVFLSESQTKQWL 377 (732)
Q Consensus 306 -------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~-~~~l~r~~~li~vS~~~~~~~~ 377 (732)
+.++.+||+||+++.... +...++....+.+.++ ++. ..+.... +.....++.++++++.....
T Consensus 78 ~~~~l~~~i~~~~pDvVi~~~~~~~--~~~~~~~~~~~~p~v~---~~~-~~~~~~~~~~~~~~~d~ii~~~~~~~~~-- 149 (348)
T TIGR01133 78 AVFQARRILKKFKPDAVIGFGGYVS--GPAGLAAKLLGIPLFH---HEQ-NAVPGLTNKLLSRFAKKVLISFPGAKDH-- 149 (348)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccc--HHHHHHHHHcCCCEEE---ECC-CCCccHHHHHHHHHhCeeEECchhHhhc--
Confidence 233678999999865432 2223333444544332 111 1111111 11222366777777764221
Q ss_pred hHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCC
Q 004760 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKG 457 (732)
Q Consensus 378 ~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG 457 (732)
.. ..+|+|+++...+.+... +++++++++.++|+++|+....|+
T Consensus 150 -----------~~--------------~~~i~n~v~~~~~~~~~~-----------~~~~~~~~~~~~i~~~gg~~~~~~ 193 (348)
T TIGR01133 150 -----------FE--------------AVLVGNPVRQEIRSLPVP-----------RERFGLREGKPTILVLGGSQGAKI 193 (348)
T ss_pred -----------CC--------------ceEEcCCcCHHHhcccch-----------hhhcCCCCCCeEEEEECCchhHHH
Confidence 01 168999998765533211 235788888889999998777888
Q ss_pred HHH-HHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccC
Q 004760 458 QLL-LVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (732)
Q Consensus 458 ~d~-LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~ 536 (732)
+.. +++|++.+.+....
T Consensus 194 ~~~~l~~a~~~l~~~~~~-------------------------------------------------------------- 211 (348)
T TIGR01133 194 LNELVPKALAKLAEKGIQ-------------------------------------------------------------- 211 (348)
T ss_pred HHHHHHHHHHHHhhcCcE--------------------------------------------------------------
Confidence 654 55788776432111
Q ss_pred CCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhh
Q 004760 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR 616 (732)
Q Consensus 537 ~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~d 616 (732)
-+++.|++.. ..++..+ +.+++.+.+.|. .. +
T Consensus 212 ------------------------~~~~~g~~~~-~~l~~~~---------------------~~~~l~~~v~~~-~~-~ 243 (348)
T TIGR01133 212 ------------------------IVHQTGKNDL-EKVKNVY---------------------QELGIEAIVTFI-DE-N 243 (348)
T ss_pred ------------------------EEEECCcchH-HHHHHHH---------------------hhCCceEEecCc-cc-C
Confidence 1233454432 3333322 223665566676 33 8
Q ss_pred HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC-------hhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG-------TKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 617 v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG-------~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+.++|++||++|.+| .|++++|||++|+|+|+++.++ ..+++.++.+|++++++|.++++|+++|.+
T Consensus 244 ~~~~l~~ad~~v~~~------g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 244 MAAAYAAADLVISRA------GASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred HHHHHHhCCEEEECC------ChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 999999999999765 2789999999999999998754 346788888999998887445999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMY 718 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~ 718 (732)
+++|++.+++|++++++.+++ +..++++
T Consensus 318 ll~~~~~~~~~~~~~~~~~~~-~~~~~i~ 345 (348)
T TIGR01133 318 LLLDPANLEAMAEAARKLAKP-DAAKRIA 345 (348)
T ss_pred HHcCHHHHHHHHHHHHhcCCc-cHHHHHH
Confidence 999999999999999876543 4444443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-20 Score=209.02 Aligned_cols=257 Identities=16% Similarity=0.190 Sum_probs=180.2
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+.|.+......+...|... ......+.-+. .......+.++|||+|++.|.+.......+.....+|+.++
T Consensus 184 ~dligF~t~~~~~~Fl~~~~~~-l~~~~~~~~~~--~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--- 257 (456)
T TIGR02400 184 YDLVGFQTYDDARNFLSAVSRE-LGLETLPNGVE--SGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK--- 257 (456)
T ss_pred CCEEEECCHHHHHHHHHHHHHH-hCCcccCCceE--ECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC---
Confidence 7889999888877666655321 11111111111 22345567899999999998654221110111235677663
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|+++||+.+.||++.+++|++.+.++.|+. +
T Consensus 258 ~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~------------------------~--------------------- 292 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEW------------------------R--------------------- 292 (456)
T ss_pred CCeEEEEccccccccCHHHHHHHHHHHHHhCccc------------------------c---------------------
Confidence 5678999999999999999999999998887751 0
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEec-----cCchhhhhHhhhhhccCCCCCChhhHHHHHH
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK-----SDGKQQQALKILIGSVGSKSNKVPYVKEILE 596 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lliv-----G~G~~~~~Lk~li~~~G~~~~~~~y~k~il~ 596 (732)
.+..++.+ |+++..+.++..+. ++..
T Consensus 293 ------------------------------------~~v~Lv~v~~p~rg~~~~~~~l~~~i~-------------~lv~ 323 (456)
T TIGR02400 293 ------------------------------------GKVVLVQIAVPSRGDVPEYQQLRRQVE-------------ELVG 323 (456)
T ss_pred ------------------------------------CceEEEEEecCCccCchHHHHHHHHHH-------------HHHH
Confidence 01123333 34455555544442 1211
Q ss_pred HHHhcCCCCC--cEEEc-cc--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCC----EEEcCCCChhhhhccC
Q 004760 597 FLSQHSNLSK--AMLWT-PA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP----VLGTDAGGTKEIVEHN 667 (732)
Q Consensus 597 ~l~~~l~l~~--~V~f~-G~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlP----VI~td~gG~~EiVe~g 667 (732)
.+...++..+ .+++. +. .+++..+|++||++|+||. .||||+|++||||||+| ||+|+.+|..+.+.
T Consensus 324 ~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~-- 399 (456)
T TIGR02400 324 RINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-- 399 (456)
T ss_pred HHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC--
Confidence 1211111111 14444 33 4899999999999999997 99999999999999999 99999988888875
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 668 VTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 668 ~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+|+++++.|+ +++|++|.++++ +++.++++.+..++.+.+ |++..++++|++-+.
T Consensus 400 -~gllVnP~d~--~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 400 -GALLVNPYDI--DGMADAIARALTMPLEEREERHRAMMDKLRK-NDVQRWREDFLSDLN 455 (456)
T ss_pred -CcEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhh
Confidence 6999999998 999999999998 667888888889999875 999999999987653
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-18 Score=183.62 Aligned_cols=330 Identities=13% Similarity=0.078 Sum_probs=200.8
Q ss_pred cCCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCC--CCChhHHH------------------hCCcEEEEc
Q 004760 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR--GGLMPELA------------------RRKIKVLED 300 (732)
Q Consensus 241 ~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~--g~l~~el~------------------~~gI~v~~~ 300 (732)
+.+||++++.+. .+|-......|+.+|.+.|++|++++-... .+....+. ..+......
T Consensus 3 ~~~rili~t~~~-G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 81 (380)
T PRK13609 3 KNPKVLILTAHY-GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIYD 81 (380)
T ss_pred CCCeEEEEEcCC-CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccc
Confidence 346888888776 558888899999999999998766652221 11111110 001000000
Q ss_pred CCC---------ch---hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEe
Q 004760 301 RGE---------PS---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFL 368 (732)
Q Consensus 301 ~~~---------~~---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~v 368 (732)
... .. +.++.+||+||++..... +..+......+.+ ++.++.. +.....-...+++.+++.
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~--~~~~~~~~~~~ip-~~~~~td----~~~~~~~~~~~ad~i~~~ 154 (380)
T PRK13609 82 KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA--VPELKKQTGISIP-TYNVLTD----FCLHKIWVHREVDRYFVA 154 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH--HHHHHHhcCCCCC-eEEEeCC----CCCCcccccCCCCEEEEC
Confidence 000 00 333789999998754332 2223333333344 4433311 111111123457889999
Q ss_pred cHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCE-EEE
Q 004760 369 SESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDM-LVL 447 (732)
Q Consensus 369 S~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~-lil 447 (732)
|+..... . .+.+..+ ++ +.++.+.++. .|.+... +..+|+++|++++.. +++
T Consensus 155 s~~~~~~----l----~~~gi~~-------~k----i~v~G~p~~~-~f~~~~~-------~~~~~~~~~l~~~~~~il~ 207 (380)
T PRK13609 155 TDHVKKV----L----VDIGVPP-------EQ----VVETGIPIRS-SFELKIN-------PDIIYNKYQLCPNKKILLI 207 (380)
T ss_pred CHHHHHH----H----HHcCCCh-------hH----EEEECcccCh-HHcCcCC-------HHHHHHHcCCCCCCcEEEE
Confidence 8875332 2 2233322 11 2344333332 2221111 134688899987654 566
Q ss_pred EEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhc
Q 004760 448 SLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQ 527 (732)
Q Consensus 448 ~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~ 527 (732)
+.|+....|+++.+++++... ++
T Consensus 208 ~~G~~~~~k~~~~li~~l~~~----~~----------------------------------------------------- 230 (380)
T PRK13609 208 MAGAHGVLGNVKELCQSLMSV----PD----------------------------------------------------- 230 (380)
T ss_pred EcCCCCCCcCHHHHHHHHhhC----CC-----------------------------------------------------
Confidence 678888889999988887521 22
Q ss_pred cCCcccccCCCCCcccccCCCCccccCCcccceeEEec-cCc-hhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC
Q 004760 528 LNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK-SDG-KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS 605 (732)
Q Consensus 528 ~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lliv-G~G-~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~ 605 (732)
.+++++ |++ ..++.++.++ +. ..
T Consensus 231 --------------------------------~~~viv~G~~~~~~~~l~~~~---------------------~~--~~ 255 (380)
T PRK13609 231 --------------------------------LQVVVVCGKNEALKQSLEDLQ---------------------ET--NP 255 (380)
T ss_pred --------------------------------cEEEEEeCCCHHHHHHHHHHH---------------------hc--CC
Confidence 123333 432 2333333332 22 22
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC-CCCh----hhhhccCceEEEECCCCCcH
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD-AGGT----KEIVEHNVTGLLHPPGHPGA 680 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td-~gG~----~EiVe~g~~Gll~~~~d~~~ 680 (732)
++|+|+|+++++.++|++||++|. ++.|++++||||||+|||+++ .+|. .+++.+ +|+.+...|.
T Consensus 256 ~~v~~~g~~~~~~~l~~~aD~~v~------~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~-- 325 (380)
T PRK13609 256 DALKVFGYVENIDELFRVTSCMIT------KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDD-- 325 (380)
T ss_pred CcEEEEechhhHHHHHHhccEEEe------CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCH--
Confidence 689999999999999999999883 346899999999999999986 4542 234443 3444445666
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 681 QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
++++++|.++++|++.+++|++++++... .++++.+++.+++++..+
T Consensus 326 ~~l~~~i~~ll~~~~~~~~m~~~~~~~~~-~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 326 EEVFAKTEALLQDDMKLLQMKEAMKSLYL-PEPADHIVDDILAENHVE 372 (380)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHhCC-CchHHHHHHHHHHhhhhh
Confidence 99999999999999999999999887654 489999999999988664
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-18 Score=201.63 Aligned_cols=262 Identities=13% Similarity=0.142 Sum_probs=182.2
Q ss_pred cccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCC
Q 004760 361 RVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLT 440 (732)
Q Consensus 361 r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~ 440 (732)
..+.+-|.+......+...|... ++.......+..+.....+.+||||+|++.|.+.......+.....+|+.++
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~---l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-- 277 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRI---LGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA-- 277 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHH---hCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC--
Confidence 37888998888766555544221 1211111112223344567899999999988643221110111234555554
Q ss_pred CCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccccccc
Q 004760 441 DQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSV 520 (732)
Q Consensus 441 ~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~ 520 (732)
+..+|+++||+.+.||++.+|+|++.+.++.|+. +|+.
T Consensus 278 -~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~------------------------~~kv----------------- 315 (797)
T PLN03063 278 -GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEW------------------------RDKV----------------- 315 (797)
T ss_pred -CCeEEEEecccccccCHHHHHHHHHHHHHhCccc------------------------cCcE-----------------
Confidence 5678999999999999999999999999888861 1111
Q ss_pred chhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEec-----cCchhhhhHhhhhhccCCCCCChhhHHHHH
Q 004760 521 SSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK-----SDGKQQQALKILIGSVGSKSNKVPYVKEIL 595 (732)
Q Consensus 521 ~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lliv-----G~G~~~~~Lk~li~~~G~~~~~~~y~k~il 595 (732)
.|+.+ |+|+..+.++..+... .
T Consensus 316 ----------------------------------------vLvqia~psr~~~~~y~~l~~~v~~l-------------~ 342 (797)
T PLN03063 316 ----------------------------------------MLVQIAVPTRNDVPEYQKLKSQVHEL-------------V 342 (797)
T ss_pred ----------------------------------------EEEEEecCCCCchHHHHHHHHHHHHH-------------H
Confidence 11111 3455555555554322 1
Q ss_pred HHHHhcCCCC--CcEEEcc-c--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCC----EEEcCCCChhhhhcc
Q 004760 596 EFLSQHSNLS--KAMLWTP-A--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP----VLGTDAGGTKEIVEH 666 (732)
Q Consensus 596 ~~l~~~l~l~--~~V~f~G-~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlP----VI~td~gG~~EiVe~ 666 (732)
..+...++.. ..|++++ . .+++..+|++||+||+||. .||||++++||||||+| +|+|+.+|..+.+
T Consensus 343 g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-- 418 (797)
T PLN03063 343 GRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-- 418 (797)
T ss_pred HHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--
Confidence 1121111111 1233332 2 3789999999999999997 99999999999999999 9999999999876
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 667 NVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 667 g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
+.+|+++++.|+ +++|++|..++. +++.++++.+..++.+.. +++..+++.|++.|+.+.
T Consensus 419 ~~~allVnP~D~--~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 419 GAGALLVNPWNI--TEVSSAIKEALNMSDEERETRHRHNFQYVKT-HSAQKWADDFMSELNDII 479 (797)
T ss_pred cCCeEEECCCCH--HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHHHh
Confidence 347999999998 999999999999 778888888888988875 999999999999888765
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.6e-17 Score=181.31 Aligned_cols=363 Identities=18% Similarity=0.165 Sum_probs=235.7
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHh---------------------------
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR--------------------------- 292 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~--------------------------- 292 (732)
||++++.|. ..||-.-.+-.|.++|++.|++|.|+.+.-. .+..+...
T Consensus 2 ~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYP-KVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred cceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCch-hhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 466666665 5699999999999999999999999975432 22211111
Q ss_pred CCcEEEEcCC----Cc----h------------hh-------h--h--cCccEEEeCCchhhHHHHHHHHhhc--CCCcc
Q 004760 293 RKIKVLEDRG----EP----S------------FK-------T--S--MKADLVIAGSAVCATWIDQYITRFP--AGGSQ 339 (732)
Q Consensus 293 ~gI~v~~~~~----~~----~------------~~-------~--~--~k~DlVia~Sav~~~~i~~~i~~~~--~~~~~ 339 (732)
.++++..... .+ . |. . . ..|||||+|+-.++ .++.++.... .-..+
T Consensus 81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~-L~~~~lk~~~~~~~~i~ 159 (487)
T COG0297 81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTG-LLPAYLKQRYRSGYIIP 159 (487)
T ss_pred CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHH-HHHHHHhhcccccccCC
Confidence 0122221110 00 0 11 1 1 36999988864332 2333443321 11233
Q ss_pred EEEEEeec------h-----------hHhH----------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCc
Q 004760 340 VVWWIMEN------R-----------REYF----------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPA 392 (732)
Q Consensus 340 ivw~i~e~------r-----------~~~~----------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~ 392 (732)
.+..||.. + ..|. ...+..+...+.+.++|..-+.. ++..+.+. +...
T Consensus 160 tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~E--i~t~~~g~--gl~g- 234 (487)
T COG0297 160 TVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGE--IYTPEYGE--GLEG- 234 (487)
T ss_pred eEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHh--hccccccc--cchh-
Confidence 45555521 1 0111 11233344488899999886432 11111111 1100
Q ss_pred cccccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCCHH
Q 004760 393 VVPLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQL 459 (732)
Q Consensus 393 ~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG~d 459 (732)
+-... ...+.+|.||+|...+.|+... .++...+..+++++|++. +.+++.++||+..+||+|
T Consensus 235 ---~l~~~-~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~d 310 (487)
T COG0297 235 ---LLSWR-SGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLD 310 (487)
T ss_pred ---hhhhc-cccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchh
Confidence 00001 1356899999999887764321 124456788999999984 568999999999999999
Q ss_pred HHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCC
Q 004760 460 LLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSP 539 (732)
Q Consensus 460 ~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p 539 (732)
++++|+..+.++.-
T Consensus 311 l~~~~i~~~l~~~~------------------------------------------------------------------ 324 (487)
T COG0297 311 LLLEAIDELLEQGW------------------------------------------------------------------ 324 (487)
T ss_pred HHHHHHHHHHHhCc------------------------------------------------------------------
Confidence 99999999976642
Q ss_pred CcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchh-hHH
Q 004760 540 SLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT-RVA 618 (732)
Q Consensus 540 ~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~-dv~ 618 (732)
+++++|.| ...++.. + ..+++.+.. .-....++.+ -..
T Consensus 325 ---------------------~~vilG~g--d~~le~~----------------~-~~la~~~~~-~~~~~i~~~~~la~ 363 (487)
T COG0297 325 ---------------------QLVLLGTG--DPELEEA----------------L-RALASRHPG-RVLVVIGYDEPLAH 363 (487)
T ss_pred ---------------------eEEEEecC--cHHHHHH----------------H-HHHHHhcCc-eEEEEeeecHHHHH
Confidence 46677777 2222222 2 222222222 2333445554 366
Q ss_pred HHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--------CceEEEECCCCCcHHHHHHHHHHH
Q 004760 619 SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--------NVTGLLHPPGHPGAQVLAQNLRYL 690 (732)
Q Consensus 619 ~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--------g~~Gll~~~~d~~~e~La~aL~~L 690 (732)
.+|+.||++++||+ .|++|++-++||.+|+++|+...||+++.|.+ ..+|+++.+.++ +.|+.+|++.
T Consensus 364 ~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~--~~l~~al~rA 439 (487)
T COG0297 364 LIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP--DHLANALRRA 439 (487)
T ss_pred HHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH--HHHHHHHHHH
Confidence 89999999999998 99999999999999999999999999998874 479999998877 9999999866
Q ss_pred hc---CHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 691 LK---NPSV-RERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 691 L~---n~~~-r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+. ++.. ++.+..++.. ..|+|+..+++|.++|+.+...
T Consensus 440 ~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 440 LVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHhcc
Confidence 53 4444 7777777765 5799999999999999998764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=197.08 Aligned_cols=259 Identities=17% Similarity=0.231 Sum_probs=175.9
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+-|.+......+...|... .........+.+ .+....+.++|||+|+..|.+.......+.....+|+.+ .
T Consensus 190 ~Dligf~t~~~~r~Fl~~~~~~-l~~~~~~~~~~~--~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~ 263 (726)
T PRK14501 190 ADLIGFHTYDYVRHFLSSVLRV-LGYETELGEIRL--GGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---R 263 (726)
T ss_pred CCeEEeCCHHHHHHHHHHHHHH-cCCccCCCeEEE--CCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---C
Confidence 7778888877655455555321 111111111122 233345789999999999876432111111223455554 3
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|+++||+.+.||+..+|+|+..+.++.|+. +
T Consensus 264 ~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~------------------------~--------------------- 298 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEW------------------------R--------------------- 298 (726)
T ss_pred CCEEEEEecCcccccCHHHHHHHHHHHHHhCccc------------------------c---------------------
Confidence 5679999999999999999999999998887751 1
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEecc----Cc-hhhhhHhhhhhccCCCCCChhhHHHHHH
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKS----DG-KQQQALKILIGSVGSKSNKVPYVKEILE 596 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG----~G-~~~~~Lk~li~~~G~~~~~~~y~k~il~ 596 (732)
.+.+++++| .| +..++++..+ .++..
T Consensus 299 ------------------------------------~~v~lv~v~~~sr~~~~~~~~l~~~~-------------~~~v~ 329 (726)
T PRK14501 299 ------------------------------------GKVRLVQVAVPSRTGVPQYQEMKREI-------------DELVG 329 (726)
T ss_pred ------------------------------------CCEEEEEEecCCCcchHHHHHHHHHH-------------HHHHH
Confidence 112344444 22 3333444333 22222
Q ss_pred HHHhcCCC---CCcEEEccc--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHc-----CCCEEEcCCCChhhhhcc
Q 004760 597 FLSQHSNL---SKAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF-----GVPVLGTDAGGTKEIVEH 666 (732)
Q Consensus 597 ~l~~~l~l---~~~V~f~G~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~-----GlPVI~td~gG~~EiVe~ 666 (732)
.+...++. ...+.|.+. .+++..+|++||++++||. .||||++++||||| |+||++..+|+..+++
T Consensus 330 ~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-- 405 (726)
T PRK14501 330 RINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-- 405 (726)
T ss_pred HHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHhC--
Confidence 22222222 223456664 4899999999999999997 99999999999999 5577778888888875
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 667 NVTGLLHPPGHPGAQVLAQNLRYLLKNP-SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 667 g~~Gll~~~~d~~~e~La~aL~~LL~n~-~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.|+++++.|+ +++|++|.+++.++ +.+.+...++++.+. .|+|+.++++|++.|+++.
T Consensus 406 --~~llv~P~d~--~~la~ai~~~l~~~~~e~~~r~~~~~~~v~-~~~~~~w~~~~l~~l~~~~ 464 (726)
T PRK14501 406 --EALLVNPNDI--EGIAAAIKRALEMPEEEQRERMQAMQERLR-RYDVHKWASDFLDELREAA 464 (726)
T ss_pred --cCeEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 3899999998 99999999999864 455555567888876 6999999999999998874
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-17 Score=179.57 Aligned_cols=219 Identities=16% Similarity=0.156 Sum_probs=153.0
Q ss_pred ccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCC
Q 004760 360 DRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGL 439 (732)
Q Consensus 360 ~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl 439 (732)
..++.+++.|+..... . ...+..+ + .+.+++++++...+.+... +..+|+++|+
T Consensus 149 ~~~d~~~~~s~~~~~~----l----~~~g~~~-------~----ki~v~g~~v~~~f~~~~~~-------~~~~r~~~gl 202 (382)
T PLN02605 149 KGVTRCFCPSEEVAKR----A----LKRGLEP-------S----QIRVYGLPIRPSFARAVRP-------KDELRRELGM 202 (382)
T ss_pred CCCCEEEECCHHHHHH----H----HHcCCCH-------H----HEEEECcccCHhhccCCCC-------HHHHHHHcCC
Confidence 3477788888775332 2 2334332 1 2366777777544332211 2567899999
Q ss_pred CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHh----CCCCchhhhhhccccccccccccccccccccccccccccccCcc
Q 004760 440 TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQ----EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSS 515 (732)
Q Consensus 440 ~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~----~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~ 515 (732)
+++.++|+++|+....|++..+++++..+... .++
T Consensus 203 ~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----------------------------------------- 241 (382)
T PLN02605 203 DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----------------------------------------- 241 (382)
T ss_pred CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC-----------------------------------------
Confidence 99999999999999999999999998764311 111
Q ss_pred cccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchh-hhhHhhhhhccCCCCCChhhHHHH
Q 004760 516 NELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ-QQALKILIGSVGSKSNKVPYVKEI 594 (732)
Q Consensus 516 ~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~-~~~Lk~li~~~G~~~~~~~y~k~i 594 (732)
...++++|++.. ++.++..
T Consensus 242 -------------------------------------------~~~~vi~G~~~~~~~~L~~~----------------- 261 (382)
T PLN02605 242 -------------------------------------------GQVVVICGRNKKLQSKLESR----------------- 261 (382)
T ss_pred -------------------------------------------ceEEEEECCCHHHHHHHHhh-----------------
Confidence 012456666531 2222211
Q ss_pred HHHHHhcCCCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC------CChhhhhccCc
Q 004760 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA------GGTKEIVEHNV 668 (732)
Q Consensus 595 l~~l~~~l~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~------gG~~EiVe~g~ 668 (732)
....+|+|+|++++++++|++||++|.++ .|++++||||||+|+|+++. |+...++ ++.
T Consensus 262 --------~~~~~v~~~G~~~~~~~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g 326 (382)
T PLN02605 262 --------DWKIPVKVRGFVTNMEEWMGACDCIITKA------GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNG 326 (382)
T ss_pred --------cccCCeEEEeccccHHHHHHhCCEEEECC------CcchHHHHHHcCCCEEEecCCCccchhhHHHHH-hCC
Confidence 12346999999999999999999999755 47899999999999999984 4454444 445
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 669 TGLLHPPGHPGAQVLAQNLRYLLKN-PSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 669 ~Gll~~~~d~~~e~La~aL~~LL~n-~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
.|++. +|+ ++++++|.+++.| ++.+++|++++++.... .+.+.+++.+.+..
T Consensus 327 ~g~~~--~~~--~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~-~a~~~i~~~l~~~~ 379 (382)
T PLN02605 327 FGAFS--ESP--KEIARIVAEWFGDKSDELEAMSENALKLARP-EAVFDIVHDLHELV 379 (382)
T ss_pred ceeec--CCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHh
Confidence 67654 565 9999999999998 99999999999987753 67777777666554
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-17 Score=160.03 Aligned_cols=69 Identities=46% Similarity=0.672 Sum_probs=62.1
Q ss_pred CCCCcEEEccc---hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEE
Q 004760 603 NLSKAMLWTPA---TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLH 673 (732)
Q Consensus 603 ~l~~~V~f~G~---~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~ 673 (732)
+..++|.++|+ .+++..++++||++++||. .|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 158 LLLDRVIFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcccEEEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 56689999997 3667777777999999998 899999999999999999999999999999988899874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-16 Score=158.35 Aligned_cols=202 Identities=31% Similarity=0.528 Sum_probs=159.9
Q ss_pred EEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCC--EEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhh
Q 004760 405 VAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQD--MLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRK 482 (732)
Q Consensus 405 v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~--~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~ 482 (732)
+..++++++...+.+. ..++..+. ..++++|++.+.||++.+++++..+.+..+.
T Consensus 174 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~-------- 230 (381)
T COG0438 174 IVVIPNGIDTEKFAPA---------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD-------- 230 (381)
T ss_pred ceEecCCcCHHHcCcc---------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--------
Confidence 3788999988877642 11222333 6899999999999999999999999665442
Q ss_pred ccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeE
Q 004760 483 SRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKV 562 (732)
Q Consensus 483 ~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~L 562 (732)
..+
T Consensus 231 -----------------------------------------------------------------------------~~~ 233 (381)
T COG0438 231 -----------------------------------------------------------------------------IKL 233 (381)
T ss_pred -----------------------------------------------------------------------------eEE
Confidence 245
Q ss_pred EeccCchhh-hhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchh--hHHHHHHHcCEEEEccCCCCCCCc
Q 004760 563 LSKSDGKQQ-QALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFG 639 (732)
Q Consensus 563 livG~G~~~-~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~--dv~~lysaADv~V~pS~~~~Egfg 639 (732)
+++|.+... ..+.. +.+.++..++|.|+|... ++..+++.||++++||. .|+||
T Consensus 234 ~~~g~~~~~~~~~~~---------------------~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~--~e~~~ 290 (381)
T COG0438 234 VIVGDGPERREELEK---------------------LAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSL--SEGFG 290 (381)
T ss_pred EEEcCCCccHHHHHH---------------------HHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccc--cccch
Confidence 666666542 22222 223335567899999865 78889999999999998 69999
Q ss_pred HHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 004760 640 RVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYK 719 (732)
Q Consensus 640 ~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~ 719 (732)
++++|||++|+|||+++.++..|++.++.+|++++..+. +++++++..++++++.++.+...+++.+.+.|+|+.+.+
T Consensus 291 ~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (381)
T COG0438 291 LVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV--EELADALEQLLEDPELREELGEAARERVEEEFSWERIAE 368 (381)
T ss_pred HHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999999998777886666655 999999999999998888888867777767899999999
Q ss_pred HHHHHHHHhhcC
Q 004760 720 KLSQVIYKCMKP 731 (732)
Q Consensus 720 ~~~ev~~~~l~~ 731 (732)
.+.+++..+...
T Consensus 369 ~~~~~~~~~~~~ 380 (381)
T COG0438 369 QLLELYEELLAE 380 (381)
T ss_pred HHHHHHHHHHhc
Confidence 999999887653
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-16 Score=172.58 Aligned_cols=117 Identities=13% Similarity=0.140 Sum_probs=96.8
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CC----hhhhhccCceEEEECCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GG----TKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG----~~EiVe~g~~Gll~~~~d 677 (732)
+..++|.|+|++++++++|++||++|. ++.|+++.||||+|+|+|+++. +| ...++.+...|++. ++
T Consensus 253 ~~~~~v~~~G~~~~~~~~~~~aDl~I~------k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~ 324 (391)
T PRK13608 253 KSNENVLILGYTKHMNEWMASSQLMIT------KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DT 324 (391)
T ss_pred ccCCCeEEEeccchHHHHHHhhhEEEe------CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CC
Confidence 334579999999999999999999995 3468999999999999999975 33 23344555567654 35
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
. ++++++|.++++|++.+++|++++++... .|+++.+++.+.+++....+
T Consensus 325 ~--~~l~~~i~~ll~~~~~~~~m~~~~~~~~~-~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 325 P--EEAIKIVASLTNGNEQLTNMISTMEQDKI-KYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred H--HHHHHHHHHHhcCHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhhhhhh
Confidence 5 89999999999999999999999998766 49999999999999987654
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.3e-16 Score=168.07 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=83.8
Q ss_pred CcEEEccch--hhHHHHHHHcCEEEEccCC---CCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcH
Q 004760 606 KAMLWTPAT--TRVASLYSAADVYVINSQG---LGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGA 680 (732)
Q Consensus 606 ~~V~f~G~~--~dv~~lysaADv~V~pS~~---~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~ 680 (732)
++|+|+|++ +++..+|+.||++++|+.. ..+++|++++||||||+|||+|+.+ ++++....+++. .+|+
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~---~~~~~~~~~~~~-~~d~-- 327 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP---EVRRYEDEVVLI-ADDP-- 327 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH---HHHhhcCcEEEe-CCCH--
Confidence 689999976 7999999999999999861 1346899999999999999999864 445544434444 4566
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
++++++|..++.++...... .+++ +.+.|||+..++++.+.+..
T Consensus 328 ~~~~~ai~~~l~~~~~~~~~--~~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 328 EEFVAAIEKALLEDGPARER--RRLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHhcCCchHHH--HHHH-HHHHCCHHHHHHHHHHHHHh
Confidence 99999999976544322211 1222 44569999999999977654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.8e-18 Score=181.71 Aligned_cols=331 Identities=17% Similarity=0.148 Sum_probs=241.1
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchh--------hHHH-hHHhHHH
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEK--------MREK-RNLLRDS 432 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~--------~~ek-r~~~r~~ 432 (732)
++.+.++|+.+. .+++|. +..+| + .+.|||+|+.+|+... .++| ...+|.+
T Consensus 253 AhVFTTVSeITa------~EAeHl-LkRKP--------D-----~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGH 312 (692)
T KOG3742|consen 253 AHVFTTVSEITA------LEAEHL-LKRKP--------D-----VITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGH 312 (692)
T ss_pred hhhhhhHHHHHH------HHHHHH-HhcCC--------C-----eeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 334677777763 456665 45556 2 5889999999997621 1122 1225566
Q ss_pred HHHHhCCCCCCEE-EEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccccccccccc
Q 004760 433 VRKEMGLTDQDML-VLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDD 510 (732)
Q Consensus 433 ~R~~lgl~~~~~l-il~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~ 510 (732)
+...++++-|..+ ++..||.+ ..||.|++|||+++|.......++++++..++|++++++.+....|+|+++.+++.+
T Consensus 313 F~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~d 392 (692)
T KOG3742|consen 313 FHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWD 392 (692)
T ss_pred ccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHH
Confidence 6667778777665 77889998 799999999999999998888788999999999999999999999999999999999
Q ss_pred ccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhh
Q 004760 511 VGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPY 590 (732)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y 590 (732)
+...|....--+.+++-+.. +.|++.+-++.+|.+-+. +.++ ..+++.+..+.......+..++.
T Consensus 393 tv~~Vk~~~Gkrifd~~l~g------~lPd~~ell~~~d~v~lK-----r~i~----a~~r~slPPv~THNm~dDa~Dpi 457 (692)
T KOG3742|consen 393 TVNEVKEKVGKRIFDHCLRG------ELPDLDELLDKDDLVLLK-----RCIF----ALQRQSLPPVCTHNMIDDANDPI 457 (692)
T ss_pred HHHHHHHHHHHHHHHHHhcc------cCCChHHhhChhHHHHHH-----HHHH----HhccCCCCCceeccccccccchH
Confidence 99988887777888877766 455666666666665321 1111 12334555555555555555566
Q ss_pred HHHHHHHHHhcCCCCCc--EEEccch---------hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 591 VKEILEFLSQHSNLSKA--MLWTPAT---------TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 591 ~k~il~~l~~~l~l~~~--V~f~G~~---------~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
+..+...---+ .-.++ |+|++.- -|+.++.+.|++.|+||. +|+||.+..|+-.+|+|-|+||.+|
T Consensus 458 L~~iRr~~LFN-~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtTNlSG 534 (692)
T KOG3742|consen 458 LSSIRRIGLFN-SPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTTNLSG 534 (692)
T ss_pred HHHhHhhhccc-CcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccc--cCCCCCCchheEEeccccccccccc
Confidence 65555432222 22344 5666521 389999999999999998 9999999999999999999999988
Q ss_pred hh----hhhcc-CceEEEE-----CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 660 TK----EIVEH-NVTGLLH-----PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 660 ~~----EiVe~-g~~Gll~-----~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.. |.|++ ...|+.+ ...|.++++|++.|..+.+.......++++..++..+..+|+.+...|.+.-..++
T Consensus 535 FGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 535 FGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred hhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 54 45543 2466654 22344569999999998886665566677778889999999999999988766655
Q ss_pred c
Q 004760 730 K 730 (732)
Q Consensus 730 ~ 730 (732)
+
T Consensus 615 ~ 615 (692)
T KOG3742|consen 615 S 615 (692)
T ss_pred H
Confidence 3
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-15 Score=161.27 Aligned_cols=104 Identities=19% Similarity=0.211 Sum_probs=79.4
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-----------------CCCChhhhhccCc--eEEEECC
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-----------------DAGGTKEIVEHNV--TGLLHPP 675 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-----------------d~gG~~EiVe~g~--~Gll~~~ 675 (732)
+++..+|++||++|++| |.+++|||+||+|+|++ +.+++++++.++. .+++.+.
T Consensus 253 ~~~~~~~~~aDl~v~~s-------G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (380)
T PRK00025 253 GQKREAMAAADAALAAS-------GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEE 325 (380)
T ss_pred ccHHHHHHhCCEEEECc-------cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCC
Confidence 58999999999999977 67888999999999987 5667778887653 4455555
Q ss_pred CCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 676 ~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.++ +.+++.+.++++|++.+++|++++.+..+. . ....++++.+.+.+.+
T Consensus 326 ~~~--~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~-~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 326 ATP--EKLARALLPLLADGARRQALLEGFTELHQQ-L-RCGADERAAQAVLELL 375 (380)
T ss_pred CCH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-h-CCCHHHHHHHHHHHHh
Confidence 555 999999999999999999999987555443 2 2334555555555443
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-17 Score=187.95 Aligned_cols=330 Identities=16% Similarity=0.148 Sum_probs=191.5
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhh-HHHh----HHhHHHHHHH
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKM-REKR----NLLRDSVRKE 436 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~-~ekr----~~~r~~~R~~ 436 (732)
++.+.++|+.+... | +++ ++.+| + .|+|||+|...|..... +.++ +.+.+.+|..
T Consensus 222 AdvFTTVSeITa~E----a--~~L-L~r~p--------D-----vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~ 281 (633)
T PF05693_consen 222 ADVFTTVSEITAKE----A--EHL-LKRKP--------D-----VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGH 281 (633)
T ss_dssp SSEEEESSHHHHHH----H--HHH-HSS----------S-----EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHH----H--HHH-hCCCC--------C-----EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 78899999998654 3 222 45445 3 58999999998865432 1111 2233334433
Q ss_pred ----hCCCC-CCEEEEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccccccccccc
Q 004760 437 ----MGLTD-QDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDD 510 (732)
Q Consensus 437 ----lgl~~-~~~lil~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~ 510 (732)
+++.. +..+|+..||++ .+||.|++|||+.+|.........++...+++|.+++++.+..-.|+|+++.+++.+
T Consensus 282 f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~ 361 (633)
T PF05693_consen 282 FYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRD 361 (633)
T ss_dssp STT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHH
T ss_pred hcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHH
Confidence 34443 445688899999 899999999999999775444344677888999999999999999999999998888
Q ss_pred ccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhh
Q 004760 511 VGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPY 590 (732)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y 590 (732)
+...+-.-+--+-+...++ ...|+.-+.++..|.+.+ ++.++. .++..+..++.+.-.....++.
T Consensus 362 t~~~i~~~~g~~~~~~~~~------~~~p~~~~~~~~~~~~~l------kr~i~~---~~r~~lPPi~TH~l~d~~~DpI 426 (633)
T PF05693_consen 362 TVDEIQEKIGKRLFESCLS------GRLPDLNELLDKEDIVRL------KRCIFA---LQRNSLPPITTHNLHDDSNDPI 426 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHH------SSS-SHHHCS-HHHHHHH------HHHHHT---T--T----SBSEEETTTTT-HH
T ss_pred HHHHHHHHHHHHHHHHHhC------CCCCChHHhcChhhHHHH------HHHHHH---hccCCCCCeeeeCCCCCccCHH
Confidence 8766665554444444332 113333333333343322 111111 1234455555555444455555
Q ss_pred HHHHHHHHHhcCCCCC--cEEEccch---------hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 591 VKEILEFLSQHSNLSK--AMLWTPAT---------TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 591 ~k~il~~l~~~l~l~~--~V~f~G~~---------~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
+..+.+.--.+ .-.+ +|+|++.- -++.+++.+||+.|+||. +|+||.+.+|+.|+|+|.|+||..|
T Consensus 427 Ln~irr~~L~N-~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 427 LNMIRRLGLFN-NPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHHTT-----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHHhCCCCC-CCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeeccchh
Confidence 55554421111 1223 46677632 379999999999999998 9999999999999999999999999
Q ss_pred hhhhhcc-----CceEEEE-CCCCCc----HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 660 TKEIVEH-----NVTGLLH-PPGHPG----AQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 660 ~~EiVe~-----g~~Gll~-~~~d~~----~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
....+.+ ...|+.+ +-.+.+ ++++++.|..+.. +...+..+.. ..+++.+.++|+++...|.+.|..+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn-~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRN-RAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHH-HHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 8766653 2356544 333322 3677777777766 4445555444 4456667899999999999999887
Q ss_pred hc
Q 004760 729 MK 730 (732)
Q Consensus 729 l~ 730 (732)
++
T Consensus 583 L~ 584 (633)
T PF05693_consen 583 LR 584 (633)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-14 Score=159.23 Aligned_cols=260 Identities=13% Similarity=0.156 Sum_probs=180.3
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCcc-------------------ccccCCCccceEEeecCCCCCCCCCchhh
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAV-------------------VPLSVNDELAFVAGFTCSLNTPTSSPEKM 422 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~-------------------v~l~~n~~~~~v~vIpngvd~~~f~~~~~ 422 (732)
.+.+-|........+...|... +.+...... +.+..++....|.++|+|+|+..|.+...
T Consensus 189 aDliGFqt~~y~~~Fl~~~~r~-lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~ 267 (487)
T TIGR02398 189 CDYIGFHIPRYVENFVDAARGL-MPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALA 267 (487)
T ss_pred CCeEEeCCHHHHHHHHHHHHHH-hCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhc
Confidence 7888888888777666666322 111111100 01122344556789999999998854321
Q ss_pred HHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccccccccccccc
Q 004760 423 REKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGR 502 (732)
Q Consensus 423 ~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~ 502 (732)
.+..+-....+|+.++ +..+|++++|+.+.||+...++|+..+.+++|+. +
T Consensus 268 ~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~------------------------~-- 318 (487)
T TIGR02398 268 AASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLERRPEL------------------------L-- 318 (487)
T ss_pred CchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHHhCccc------------------------c--
Confidence 1111112356888888 5679999999999999999999999999999971 1
Q ss_pred ccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch-----hhhhHhhh
Q 004760 503 GLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK-----QQQALKIL 577 (732)
Q Consensus 503 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~-----~~~~Lk~l 577 (732)
.+..++.+|.+. ..++++..
T Consensus 319 -------------------------------------------------------gkv~Lvqi~~psr~~v~~y~~l~~~ 343 (487)
T TIGR02398 319 -------------------------------------------------------GKVTLVTACVPAASGMTIYDELQGQ 343 (487)
T ss_pred -------------------------------------------------------CceEEEEEeCCCcccchHHHHHHHH
Confidence 122344444432 22222222
Q ss_pred hhccCCCCCChhhHHHHHHHHHhcC---CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC--
Q 004760 578 IGSVGSKSNKVPYVKEILEFLSQHS---NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-- 650 (732)
Q Consensus 578 i~~~G~~~~~~~y~k~il~~l~~~l---~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl-- 650 (732)
+ +++...+-..+ +...-+.|.+.. +++..+|+.||+++++|. .|||++|..|+|||+.
T Consensus 344 v-------------~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~ 408 (487)
T TIGR02398 344 I-------------EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLL 408 (487)
T ss_pred H-------------HHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCC
Confidence 1 22222222222 344567777764 789999999999999997 9999999999999998
Q ss_pred --CEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 651 --PVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPS-VRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 651 --PVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~-~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
|+|.|..+|..+.+. .+++++|-|. +++|++|..+|..|. .+++.-+..++.+. .++...+++.+++-+..
T Consensus 409 ~GvLILSefaGaa~~l~---~AllVNP~d~--~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~-~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 409 DGVLVLSEFAGAAVELK---GALLTNPYDP--VRMDETIYVALAMPKAEQQARMREMFDAVN-YYDVQRWADEFLAAVSP 482 (487)
T ss_pred CCCEEEeccccchhhcC---CCEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHhhh
Confidence 999999999987774 4799999998 999999999999664 45444455566665 58999999999877654
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.2e-13 Score=161.24 Aligned_cols=266 Identities=14% Similarity=0.181 Sum_probs=181.9
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+-|.+......+...|... ++.......+..+.....|.++|.|+|...|.........+-....+|+.++
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rl---Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~--- 361 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRI---LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA--- 361 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHH---hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---
Confidence 7888888888766555555221 2221111112223334557889999999988643221111112356777776
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|++++|+.+.||+...++|+..+.+++|+. +|+.++
T Consensus 362 g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~------------------------r~kVVL---------------- 401 (934)
T PLN03064 362 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEW------------------------RDKVVL---------------- 401 (934)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHHhCccc------------------------cCCEEE----------------
Confidence 4569999999999999999999999999998872 211111
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhc
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQH 601 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~ 601 (732)
.|..+| .-+++++++.++..+ .++...+-..
T Consensus 402 ----vQIa~p--------------------------------sr~~v~eY~~l~~~V-------------~~~V~rIN~~ 432 (934)
T PLN03064 402 ----LQIAVP--------------------------------TRTDVPEYQKLTSQV-------------HEIVGRINGR 432 (934)
T ss_pred ----EEEcCC--------------------------------CCCCcHHHHHHHHHH-------------HHHHHHHhhh
Confidence 000000 003444555544333 2333333333
Q ss_pred CCCCC--cEEEcc---chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC----CEEEcCCCChhhhhccCceEEE
Q 004760 602 SNLSK--AMLWTP---ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV----PVLGTDAGGTKEIVEHNVTGLL 672 (732)
Q Consensus 602 l~l~~--~V~f~G---~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl----PVI~td~gG~~EiVe~g~~Gll 672 (732)
++..+ -|+++. ..+++..+|+.||++|+||. .|||+++..|||||+. ++|.|..+|..+.+. ..+++
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~--~~All 508 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLG--AGAIL 508 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhC--CceEE
Confidence 33321 234333 23789999999999999996 9999999999999944 444488888888773 35899
Q ss_pred ECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 673 HPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 673 ~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
++|.|. +++|++|..++. +++.++++.+..++.+.. +++..+++.|++-+..+.
T Consensus 509 VNP~D~--~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~-~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 509 VNPWNI--TEVAASIAQALNMPEEEREKRHRHNFMHVTT-HTAQEWAETFVSELNDTV 563 (934)
T ss_pred ECCCCH--HHHHHHHHHHHhCCHHHHHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHH
Confidence 999998 999999999998 888999999999999875 999999999998887764
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=148.04 Aligned_cols=108 Identities=21% Similarity=0.250 Sum_probs=82.1
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCc
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
+..++|+|++.. .++..+|+.||+++.+| |.+++|||+||+|||++ +.|+.+|+++++ .+++++ .|+
T Consensus 252 ~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d~- 321 (365)
T TIGR00236 252 GDSKRVHLIEPLEYLDFLNLAANSHLILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TDK- 321 (365)
T ss_pred CCCCCEEEECCCChHHHHHHHHhCCEEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CCH-
Confidence 455689999865 57889999999999877 34589999999999996 778889999876 455564 555
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++++++..+++|++.+++|+.+.. .|.-....+++.+++.
T Consensus 322 -~~i~~ai~~ll~~~~~~~~~~~~~~-----~~g~~~a~~ri~~~l~ 362 (365)
T TIGR00236 322 -ENITKAAKRLLTDPDEYKKMSNASN-----PYGDGEASERIVEELL 362 (365)
T ss_pred -HHHHHHHHHHHhChHHHHHhhhcCC-----CCcCchHHHHHHHHHH
Confidence 8999999999999999888876552 2333444555555443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-12 Score=138.25 Aligned_cols=132 Identities=23% Similarity=0.320 Sum_probs=110.1
Q ss_pred HHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC-hhhhhcc---
Q 004760 593 EILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG-TKEIVEH--- 666 (732)
Q Consensus 593 ~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG-~~EiVe~--- 666 (732)
+.++.++++++++++|.|--.. +++-.+|..|.+.|...- .|.||+.++|+||+|+-.|+.+.|| .-+||..
T Consensus 324 k~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G 401 (465)
T KOG1387|consen 324 KSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDG 401 (465)
T ss_pred HHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhh--hhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCC
Confidence 3445555688999999998643 899999999999999985 9999999999999999888888765 5567753
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 667 NVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 667 g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
..+|++++ +.++.|+++.++++ |++.|-.|+.++|+.+. +|+-....+.+...+.++++.
T Consensus 402 ~~tGFla~----t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~-RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 402 ETTGFLAP----TDEEYAEAILKIVKLNYDERNMMRRNARKSLA-RFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ccceeecC----ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-HhhHHHHHHhHhHHHHHhhcc
Confidence 36899884 22789999999988 77778999999998886 599999999999999988764
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.5e-13 Score=144.14 Aligned_cols=309 Identities=17% Similarity=0.133 Sum_probs=178.9
Q ss_pred HHHHHHHHHHC-CCEEEEEEeCCCCCChhH-----HH---hCCcEEE-EcCCC-ch--------------hhhhcCccEE
Q 004760 261 MMELATELLSC-GATVSAVVLSKRGGLMPE-----LA---RRKIKVL-EDRGE-PS--------------FKTSMKADLV 315 (732)
Q Consensus 261 ~~eLA~~L~~~-G~~V~vv~l~~~g~l~~e-----l~---~~gI~v~-~~~~~-~~--------------~~~~~k~DlV 315 (732)
+.-+.++|.+. |+++.+++... .+.+. .. ..+..+. ..... .. .....+||+|
T Consensus 15 ~~pl~~~l~~~~~~~~~~~~tg~--h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvV 92 (363)
T cd03786 15 LAPLIRALKKDPGFELVLVVTGQ--HYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQTAGLLIGLEAVLLEEKPDLV 92 (363)
T ss_pred HHHHHHHHhcCCCCCEEEEEeCC--CCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 56778888886 89999887422 12111 11 1222221 11211 11 2225699999
Q ss_pred EeCCchhhHHHHHHHHhhcCCCccEEEEEeech----hHhHHHhhhh-hccccEEEEecHHhHHHhhhHHHhhhhhccCC
Q 004760 316 IAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----REYFDRAKLV-LDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQ 390 (732)
Q Consensus 316 ia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r----~~~~~~~~~~-l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~ 390 (732)
|++..... .+...++++..+.| +++..+..+ .......... ....+.+++.++..... + ++.+..
T Consensus 93 ~~~g~~~~-~~~~~~aa~~~~iP-vv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~----l----~~~G~~ 162 (363)
T cd03786 93 LVLGDTNE-TLAAALAAFKLGIP-VAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEARRN----L----LQEGEP 162 (363)
T ss_pred EEeCCchH-HHHHHHHHHHcCCC-EEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHHHH----H----HHcCCC
Confidence 99865433 23344555555666 443221111 1111111111 12245566666664322 2 233443
Q ss_pred CccccccCCCccceEEeecCCC-CCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCC---CCCHHHHHHHHH
Q 004760 391 PAVVPLSVNDELAFVAGFTCSL-NTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINP---GKGQLLLVESAQ 466 (732)
Q Consensus 391 ~~~v~l~~n~~~~~v~vIpngv-d~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~---~KG~d~LLeA~~ 466 (732)
+ + .+.+++|++ |...+.+... .....|+.++++++.+++++.|+... .|+++.+++|++
T Consensus 163 ~-------~----kI~vign~v~d~~~~~~~~~------~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~ 225 (363)
T cd03786 163 P-------E----RIFVVGNTMIDALLRLLELA------KKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALA 225 (363)
T ss_pred c-------c----cEEEECchHHHHHHHHHHhh------ccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHH
Confidence 3 2 346788874 4322211110 00123567888877778888998774 799999999999
Q ss_pred HhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccC
Q 004760 467 LMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIG 546 (732)
Q Consensus 467 ~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~ 546 (732)
.+... +
T Consensus 226 ~l~~~--~------------------------------------------------------------------------ 231 (363)
T cd03786 226 ELAEE--D------------------------------------------------------------------------ 231 (363)
T ss_pred HHHhc--C------------------------------------------------------------------------
Confidence 87432 1
Q ss_pred CCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCC-CCcEEEccc--hhhHHHHHHH
Q 004760 547 NTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNL-SKAMLWTPA--TTRVASLYSA 623 (732)
Q Consensus 547 ~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l-~~~V~f~G~--~~dv~~lysa 623 (732)
..+++.|.++.+..++..+. .+++ .++|.|+|. .+++..+|++
T Consensus 232 -------------~~vi~~~~~~~~~~l~~~~~---------------------~~~~~~~~v~~~~~~~~~~~~~l~~~ 277 (363)
T cd03786 232 -------------VPVVFPNHPRTRPRIREAGL---------------------EFLGHHPNVLLISPLGYLYFLLLLKN 277 (363)
T ss_pred -------------CEEEEECCCChHHHHHHHHH---------------------hhccCCCCEEEECCcCHHHHHHHHHc
Confidence 12334445444444444332 1233 468999874 4789999999
Q ss_pred cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCC-CCcHHHHHHHHHHHhcCHHHHHHHH
Q 004760 624 ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPG-HPGAQVLAQNLRYLLKNPSVRERMA 701 (732)
Q Consensus 624 ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~-d~~~e~La~aL~~LL~n~~~r~~m~ 701 (732)
||++|.+| + | ++.|||++|+|||+++. +...|.++++ +.+..+ +. ++++++|..+++++..+..|.
T Consensus 278 ad~~v~~S---g---g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~~--~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 278 ADLVLTDS---G---G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTDP--EAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred CcEEEEcC---c---c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCCH--HHHHHHHHHHhcCchhhhcCC
Confidence 99999999 3 3 57999999999999975 4466666643 333333 44 899999999999988877763
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 702 MEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 702 ~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
...|.-.+.++++.+++
T Consensus 346 -------~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 346 -------INPYGDGNASERIVEIL 362 (363)
T ss_pred -------CCCCCCCHHHHHHHHHh
Confidence 23455455566665554
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-14 Score=130.43 Aligned_cols=83 Identities=33% Similarity=0.500 Sum_probs=61.7
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHH
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQ 685 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~ 685 (732)
++|+|+|+.+++.++|+.||+++.|+. ..+++|.+++|||++|+|||+++. +..++++....|+++ .+++ ++|++
T Consensus 53 ~~v~~~g~~~e~~~~l~~~dv~l~p~~-~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~--~~l~~ 127 (135)
T PF13692_consen 53 PNVRFHGFVEELPEILAAADVGLIPSR-FNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDP--EELAE 127 (135)
T ss_dssp CTEEEE-S-HHHHHHHHC-SEEEE-BS-S-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-H--HHHHH
T ss_pred CCEEEcCCHHHHHHHHHhCCEEEEEee-CCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCH--HHHHH
Confidence 489999999999999999999999996 377999999999999999999999 677777766677777 6666 99999
Q ss_pred HHHHHhcC
Q 004760 686 NLRYLLKN 693 (732)
Q Consensus 686 aL~~LL~n 693 (732)
+|.++++|
T Consensus 128 ~i~~l~~d 135 (135)
T PF13692_consen 128 AIERLLND 135 (135)
T ss_dssp HHHHHHH-
T ss_pred HHHHHhcC
Confidence 99999875
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-11 Score=128.12 Aligned_cols=99 Identities=11% Similarity=0.044 Sum_probs=80.7
Q ss_pred CCcEEEccch--hhHHHHHHHcCEEEEccC---------CCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEE
Q 004760 605 SKAMLWTPAT--TRVASLYSAADVYVINSQ---------GLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLH 673 (732)
Q Consensus 605 ~~~V~f~G~~--~dv~~lysaADv~V~pS~---------~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~ 673 (732)
.++|.|+|+. +++..+|+. |+.+++.. .+.-.+|.++.|+||||+|||+++.+++.|+|+++.+|+++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v 284 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV 284 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe
Confidence 3689999976 789999988 66554431 00136899999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 004760 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710 (732)
Q Consensus 674 ~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~ 710 (732)
+ +. ++++++|..+ +++.+++|++++++.++.
T Consensus 285 ~--~~--~el~~~l~~~--~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 285 D--SL--EELPEIIDNI--TEEEYQEMVENVKKISKL 315 (333)
T ss_pred C--CH--HHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 7 33 7899999886 457789999999987754
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-10 Score=129.29 Aligned_cols=97 Identities=16% Similarity=0.038 Sum_probs=65.2
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CCh----------------hhhhc
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGT----------------KEIVE 665 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~----------------~EiVe 665 (732)
+....|.+.+ .++..+|++||++|++| |.+++|||++|+|+|...- +.+ +.++.
T Consensus 249 ~~~~~v~~~~--~~~~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~ 319 (385)
T TIGR00215 249 GPDLQLHLID--GDARKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA 319 (385)
T ss_pred CCCCcEEEEC--chHHHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc
Confidence 3344565553 36678999999999998 5677899999999988732 222 22232
Q ss_pred cCceEEEECCCCCcHHHHHHHHHHHhcCH----HHHHHHHHHHHHHH
Q 004760 666 HNVTGLLHPPGHPGAQVLAQNLRYLLKNP----SVRERMAMEGRKKV 708 (732)
Q Consensus 666 ~g~~Gll~~~~d~~~e~La~aL~~LL~n~----~~r~~m~~~~r~~v 708 (732)
+......+-.++.+++.+++.+.++++|+ +.++++.+...+..
T Consensus 320 ~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 320 NRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred CCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 22111112234556699999999999999 88888766555443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.8e-12 Score=143.05 Aligned_cols=109 Identities=19% Similarity=0.279 Sum_probs=100.8
Q ss_pred CcEEEccchh--hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHH
Q 004760 606 KAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVL 683 (732)
Q Consensus 606 ~~V~f~G~~~--dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~L 683 (732)
..|.|.|+++ ++.+.|..+.++|.+|. .|+|+ +.+||++.|+|+| .-|..++|.++.||+++ +|. .+|
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li--~d~--~~l 478 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII--DDI--SEL 478 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCC--CCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--CCH--HHH
Confidence 6899999987 99999999999999998 99999 9999999999999 55568999999999999 565 899
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 684 AQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 684 a~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
++++..+|.++..+.++...+.+.+++ ||-+++.+++.+++
T Consensus 479 ~~al~~~L~~~~~wn~~~~~sy~~~~~-yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 479 LKALDYYLDNLKNWNYSLAYSIKLIDD-YSSENIIERLNELI 519 (519)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhC
Confidence 999999999999999999999999964 99999999988753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.4e-11 Score=137.95 Aligned_cols=127 Identities=17% Similarity=0.153 Sum_probs=100.5
Q ss_pred HHhcCCCCCcEEEcc-chhh-HHHHHHHcCEEEE-ccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEEC
Q 004760 598 LSQHSNLSKAMLWTP-ATTR-VASLYSAADVYVI-NSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP 674 (732)
Q Consensus 598 l~~~l~l~~~V~f~G-~~~d-v~~lysaADv~V~-pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~ 674 (732)
+++....+++|.|+- +-.. ...++++||++++ ||++ .|++|+.-+=||..|.+.+++-.|...|.. ++.||+.+.
T Consensus 450 la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~-~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~ 527 (601)
T TIGR02094 450 FSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRP-LEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIG 527 (601)
T ss_pred HHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCC-cCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEEC
Confidence 334445667888864 4434 5578999999999 9986 999999999999999999999999888877 567999998
Q ss_pred C----------CCCcHHHHHHHHHHHh-----cC-----HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 675 P----------GHPGAQVLAQNLRYLL-----KN-----PSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 675 ~----------~d~~~e~La~aL~~LL-----~n-----~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
. ++.++++|.++|++.+ ++ |..+.+|.+++.......|+|++|+++|.++|+
T Consensus 528 ~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 528 DGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred CCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 4 1234489999887544 33 556888888888766557999999999999885
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-11 Score=108.05 Aligned_cols=92 Identities=29% Similarity=0.437 Sum_probs=85.0
Q ss_pred EEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 626 VYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGR 705 (732)
Q Consensus 626 v~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r 705 (732)
+++.|+. .++++..++|+||||+|||+++.+++.+++.++..++.++ ++ +++.+++..+++||+.+++++++|+
T Consensus 1 i~Ln~~~--~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~--~el~~~i~~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSR--SDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DP--EELAEKIEYLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCC--CCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CH--HHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 3567777 7899999999999999999999999999999988999887 55 8999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHH
Q 004760 706 KKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 706 ~~v~~~ys~~~~~~~~~e 723 (732)
+.++++|+|++.++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.2e-09 Score=112.82 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=74.5
Q ss_pred EEccch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-----C----hhhhhccCceEEEECCCCC
Q 004760 609 LWTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-----G----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 609 ~f~G~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-----G----~~EiVe~g~~Gll~~~~d~ 678 (732)
...++. ++++++|++||++|.- +-+.++.|++++|+|.|.-... + ..+.+.+...+..+...+.
T Consensus 237 ~~~~f~~~~m~~~~~~adlvIsr------~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~ 310 (352)
T PRK12446 237 RQFEYVHGELPDILAITDFVISR------AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDV 310 (352)
T ss_pred EEecchhhhHHHHHHhCCEEEEC------CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcC
Confidence 445776 6899999999999844 4788999999999999987432 2 2234444456667666666
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
+++.+++.+..+++|++.+++ ++ +.+.....++++.+++..
T Consensus 311 ~~~~l~~~l~~ll~~~~~~~~---~~-----~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 311 TVNSLIKHVEELSHNNEKYKT---AL-----KKYNGKEAIQTIIDHISE 351 (352)
T ss_pred CHHHHHHHHHHHHcCHHHHHH---HH-----HHcCCCCHHHHHHHHHHh
Confidence 679999999999998876542 11 235555666666666543
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=8e-08 Score=103.37 Aligned_cols=133 Identities=20% Similarity=0.285 Sum_probs=102.0
Q ss_pred EEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc-c--chhhHHHHHHHcCEEEE--ccCCCCC
Q 004760 562 VLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT-P--ATTRVASLYSAADVYVI--NSQGLGE 636 (732)
Q Consensus 562 LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~-G--~~~dv~~lysaADv~V~--pS~~~~E 636 (732)
.++-|+||..+.....|. ++++. +|.+. + ..+|++.++..||+.|+ +|.+ +-
T Consensus 296 ciITGKGPlkE~Y~~~I~---------------------~~~~~-~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSS-GL 352 (444)
T KOG2941|consen 296 CIITGKGPLKEKYSQEIH---------------------EKNLQ-HVQVCTPWLEAEDYPKLLASADLGVCLHTSSS-GL 352 (444)
T ss_pred EEEcCCCchhHHHHHHHH---------------------Hhccc-ceeeeecccccccchhHhhccccceEeeecCc-cc
Confidence 566688877655444442 22553 34333 3 34899999999998765 4432 56
Q ss_pred CCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhc
Q 004760 637 TFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK----NPSVRERMAMEGRKKVERMY 712 (732)
Q Consensus 637 gfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~----n~~~r~~m~~~~r~~v~~~y 712 (732)
..|+++++-+.||+||++-+..-+.|+|+|+.||+++. |. ++|++.+..+++ +.+...++.++.++.. .+
T Consensus 353 DLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds--~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~--e~ 426 (444)
T KOG2941|consen 353 DLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DS--EELAEQLQMLFKNFPDNADELNQLKKNLREEQ--EL 426 (444)
T ss_pred CcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cH--HHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH--hh
Confidence 68999999999999999999999999999999999996 33 889999999998 8899999999998873 36
Q ss_pred CHHHHHHHHHH
Q 004760 713 LKKHMYKKLSQ 723 (732)
Q Consensus 713 s~~~~~~~~~e 723 (732)
.|+..-++...
T Consensus 427 RW~~~W~~~~~ 437 (444)
T KOG2941|consen 427 RWDESWERTAL 437 (444)
T ss_pred hHHHHHHHhhh
Confidence 77766555443
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-08 Score=108.68 Aligned_cols=110 Identities=21% Similarity=0.257 Sum_probs=87.6
Q ss_pred EEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-C-------hhhhhccCceEEEECCCCCc
Q 004760 608 MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-G-------TKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 608 V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-G-------~~EiVe~g~~Gll~~~~d~~ 679 (732)
+...++.+++..+|++||++|+= +-++++.|+.++|+|+|--..+ + ....+++...|.+++..+.+
T Consensus 237 ~~v~~f~~dm~~~~~~ADLvIsR------aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt 310 (357)
T COG0707 237 VRVLPFIDDMAALLAAADLVISR------AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELT 310 (357)
T ss_pred EEEeeHHhhHHHHHHhccEEEeC------CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCC
Confidence 88899999999999999999943 4789999999999999987653 3 33455566688888888867
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
++.+.+.|.+++++|+..++|.+++++... ...++++.+++..+
T Consensus 311 ~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~-----p~aa~~i~~~~~~~ 354 (357)
T COG0707 311 PEKLAELILRLLSNPEKLKAMAENAKKLGK-----PDAAERIADLLLAL 354 (357)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHH
Confidence 799999999999999999999998876533 44455555555544
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-08 Score=115.59 Aligned_cols=266 Identities=17% Similarity=0.225 Sum_probs=155.4
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+-|.+......+...|.... .......--.+..++....|.+.|-|+|.+.|......+........+++.++ .
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~l-g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~ 274 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLL-GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--G 274 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS--EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T
T ss_pred CCEEEEecHHHHHHHHHHHHHHc-CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--C
Confidence 78899999888777777774331 11111100012234445677899999999887543221111112356777775 3
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|+.+.|++..||+..=++|+..+.+++|. .+|+..+
T Consensus 275 ~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~------------------------~~~kv~l---------------- 314 (474)
T PF00982_consen 275 KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPE------------------------YRGKVVL---------------- 314 (474)
T ss_dssp -SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GG------------------------GTTTEEE----------------
T ss_pred CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcC------------------------ccCcEEE----------------
Confidence 347999999999999999999999999999997 2222222
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhc
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQH 601 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~ 601 (732)
.|...|.. .+.+..++++..+ .++...+-..
T Consensus 315 ----iQi~~psr--------------------------------~~~~~y~~~~~~v-------------~~~v~~IN~~ 345 (474)
T PF00982_consen 315 ----IQIAVPSR--------------------------------EDVPEYQELRREV-------------EELVGRINGK 345 (474)
T ss_dssp ----EEE--B-S--------------------------------TTSHHHHHHHHHH-------------HHHHHHHHHH
T ss_pred ----EEEeeccC--------------------------------ccchhHHHHHHHH-------------HHHHHHHHhh
Confidence 11111100 1112223333222 3444444444
Q ss_pred CCCCC--cEEEc-c--chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCC----EEEcCCCChhhhhccCceEEE
Q 004760 602 SNLSK--AMLWT-P--ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP----VLGTDAGGTKEIVEHNVTGLL 672 (732)
Q Consensus 602 l~l~~--~V~f~-G--~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlP----VI~td~gG~~EiVe~g~~Gll 672 (732)
++..+ -|.++ . ..+++..+|+.||+++++|. -+|+-++..|+.||..+ +|.|...|..+.+.+ ..++
T Consensus 346 ~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTsl--rDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~ 421 (474)
T PF00982_consen 346 YGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSL--RDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALL 421 (474)
T ss_dssp H-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--S--SBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EE
T ss_pred cccCCceeEEEEecCCCHHHHHHHHHhhhhEEecch--hhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEE
Confidence 45433 24444 3 23789999999999999996 99999999999999765 677888888887764 3488
Q ss_pred ECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 673 HPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 673 ~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
++|-|. +++|++|...|. .++.++..-+..++.+.+ ++..++++.+++-++
T Consensus 422 VNP~d~--~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~-~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 422 VNPWDI--EEVADAIHEALTMPPEERKERHARLREYVRE-HDVQWWAESFLRDLK 473 (474)
T ss_dssp E-TT-H--HHHHHHHHHHHT--HHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHH
T ss_pred ECCCCh--HHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh-CCHHHHHHHHHHHhh
Confidence 999988 999999999999 555666666667777764 999999999988765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.5e-07 Score=98.30 Aligned_cols=349 Identities=17% Similarity=0.207 Sum_probs=211.8
Q ss_pred cCCeEEEEeCCCCCCcHHHHHHHHHHHHHHC--CCEEEEEEeCCCCC-ChhHHHhCCcEEEEcCCCch-----hhhhcCc
Q 004760 241 WSRKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGG-LMPELARRKIKVLEDRGEPS-----FKTSMKA 312 (732)
Q Consensus 241 ~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~--G~~V~vv~l~~~g~-l~~el~~~gI~v~~~~~~~~-----~~~~~k~ 312 (732)
.+..=++-+|..|. |-.+.+.-|.++|.+. +..+.+.+.+..|. ...++-...+.+..++.+.. |.+..+|
T Consensus 46 ~~~~p~vWiHaaSV-GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P 124 (419)
T COG1519 46 KPEGPLVWIHAASV-GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLPIAVRRFLRKWRP 124 (419)
T ss_pred CCCCCeEEEEecch-hHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCchHHHHHHHHhcCC
Confidence 33445666888877 4567788999999998 77777777555552 22333334477777777665 5558899
Q ss_pred cEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh---HhHH---HhhhhhccccEEEEecHHhHHHhhhHHHhhhhh
Q 004760 313 DLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR---EYFD---RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLK 386 (732)
Q Consensus 313 DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~---~~~~---~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~ 386 (732)
|++|.--. -.|..-.......+.+.+.-----.-+ .|.. ..+..+..++.++..|+.+.+. + ..
T Consensus 125 ~l~Ii~Et--ElWPnli~e~~~~~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~R----f----~~ 194 (419)
T COG1519 125 KLLIIMET--ELWPNLINELKRRGIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQR----F----RS 194 (419)
T ss_pred CEEEEEec--cccHHHHHHHHHcCCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHH----H----Hh
Confidence 99977532 235554555556666644321100001 1111 1234555688888888886443 4 44
Q ss_pred ccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHH
Q 004760 387 LRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQ 466 (732)
Q Consensus 387 l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~ 466 (732)
+|..+ |.+..|-. .|.+.- +... ...+.+|..++.+ +.+++..|+ ....-+.++++++
T Consensus 195 LGa~~--v~v~GNlK----------fd~~~~-~~~~-----~~~~~~r~~l~~~--r~v~iaaST--H~GEeei~l~~~~ 252 (419)
T COG1519 195 LGAKP--VVVTGNLK----------FDIEPP-PQLA-----AELAALRRQLGGH--RPVWVAAST--HEGEEEIILDAHQ 252 (419)
T ss_pred cCCcc--eEEeccee----------ecCCCC-hhhH-----HHHHHHHHhcCCC--CceEEEecC--CCchHHHHHHHHH
Confidence 66654 11111111 111111 1111 1347788888865 456666666 3333456999999
Q ss_pred HhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccC
Q 004760 467 LMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIG 546 (732)
Q Consensus 467 ~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~ 546 (732)
.+.++.|+.
T Consensus 253 ~l~~~~~~~----------------------------------------------------------------------- 261 (419)
T COG1519 253 ALKKQFPNL----------------------------------------------------------------------- 261 (419)
T ss_pred HHHhhCCCc-----------------------------------------------------------------------
Confidence 999998871
Q ss_pred CCCccccCCcccceeEEeccCchh-hhhHhhhhhccCC----CCCChhhHHHHHHHHHhcCCCCCcEEEccchhhHHHHH
Q 004760 547 NTDAVSFGSGHLRRKVLSKSDGKQ-QQALKILIGSVGS----KSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLY 621 (732)
Q Consensus 547 ~~d~v~iG~~~~~~~LlivG~G~~-~~~Lk~li~~~G~----~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv~~ly 621 (732)
.++++=+-++ .+.+..++...|- .+.. .....+.+|.......++..+|
T Consensus 262 --------------llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~------------~~~~~~tdV~l~DtmGEL~l~y 315 (419)
T COG1519 262 --------------LLILVPRHPERFKAVENLLKRKGLSVTRRSQG------------DPPFSDTDVLLGDTMGELGLLY 315 (419)
T ss_pred --------------eEEEecCChhhHHHHHHHHHHcCCeEEeecCC------------CCCCCCCcEEEEecHhHHHHHH
Confidence 1122222221 2233333333321 0000 0001234677777779999999
Q ss_pred HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHH
Q 004760 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVR 697 (732)
Q Consensus 622 saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r 697 (732)
..||+.++.-. +.+-.|-.++|+.++|+|||.-.. ..+.+-+.+...|+.++. . +.++..+..++.|++.+
T Consensus 316 ~~adiAFVGGS-lv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~--~~l~~~v~~l~~~~~~r 390 (419)
T COG1519 316 GIADIAFVGGS-LVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED--A--DLLAKAVELLLADEDKR 390 (419)
T ss_pred hhccEEEECCc-ccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC--H--HHHHHHHHHhcCCHHHH
Confidence 99998666543 466788999999999999998533 344444555556777764 3 77999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 698 ERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 698 ~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
++|++++.+.+.++ +...+++++.+..
T Consensus 391 ~~~~~~~~~~v~~~---~gal~r~l~~l~~ 417 (419)
T COG1519 391 EAYGRAGLEFLAQN---RGALARTLEALKP 417 (419)
T ss_pred HHHHHHHHHHHHHh---hHHHHHHHHHhhh
Confidence 99999999998764 5566676666654
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.9e-08 Score=111.48 Aligned_cols=265 Identities=12% Similarity=0.093 Sum_probs=174.2
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+-|.+......+...|... ........ ..+...+....|.+.|-|+|++.|......+... ....+|+.++
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~-lg~~~~~~-~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~-~~~~lr~~~~--- 253 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNL-TRVTTRSG-KSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPP-KLAQLKAELK--- 253 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHH-cCCcccCC-CeEEECCeEEEEEEEECeEcHHHHHHHhhchHHH-HHHHHHHHcC---
Confidence 7778888888776666666432 11111010 0011123345678999999998875422111111 2255777775
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|+.+.|++..||+..=++|+..+.+++|+ ++|+..+
T Consensus 254 ~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe------------------------~~gkvvl---------------- 293 (474)
T PRK10117 254 NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ------------------------HHGKIRY---------------- 293 (474)
T ss_pred CCeEEEEecccccccCHHHHHHHHHHHHHhChh------------------------hcCCEEE----------------
Confidence 466899999999999999999999999999998 2333322
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhc
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQH 601 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~ 601 (732)
.|...|.. ++.+..++++..+ +++...+-..
T Consensus 294 ----vQia~psR--------------------------------~~v~~Y~~l~~~v-------------~~~vg~INg~ 324 (474)
T PRK10117 294 ----TQIAPTSR--------------------------------GDVQAYQDIRHQL-------------ETEAGRINGK 324 (474)
T ss_pred ----EEEcCCCC--------------------------------CccHHHHHHHHHH-------------HHHHHHHHhc
Confidence 01111100 1112223332222 3333344444
Q ss_pred CCCCC--cEEEcc---chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC-----CEEEcCCCChhhhhccCceEE
Q 004760 602 SNLSK--AMLWTP---ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-----PVLGTDAGGTKEIVEHNVTGL 671 (732)
Q Consensus 602 l~l~~--~V~f~G---~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl-----PVI~td~gG~~EiVe~g~~Gl 671 (732)
++..+ -|+++. ..+++..+|+.||+.+++|. -+|+-+|..|+.||-. ++|.|...|..+.+. ..+
T Consensus 325 fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTpl--RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~Al 399 (474)
T PRK10117 325 YGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SAL 399 (474)
T ss_pred cCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccc--ccccccccchheeeecCCCCccEEEecccchHHHhC---CCe
Confidence 44433 244433 23789999999999999996 9999999999999965 377788888887775 378
Q ss_pred EECCCCCcHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 672 LHPPGHPGAQVLAQNLRYLLKN-PSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 672 l~~~~d~~~e~La~aL~~LL~n-~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
+++|-|. +++|++|...|.- ++++++.-+..++.+. .++..++++.+++-+..+.
T Consensus 400 lVNP~d~--~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~-~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 400 IVNPYDR--DEVAAALDRALTMPLAERISRHAEMLDVIV-KNDINHWQECFISDLKQIV 455 (474)
T ss_pred EECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHhh
Confidence 9999998 9999999999984 4556555566666665 5899999999999887763
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-08 Score=120.37 Aligned_cols=193 Identities=15% Similarity=0.121 Sum_probs=142.7
Q ss_pred CCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccccc
Q 004760 439 LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNEL 518 (732)
Q Consensus 439 l~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~ 518 (732)
++.+.++|.++.|+..+|+++++++.+.++.+-..+.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~------------------------------------------- 510 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDP------------------------------------------- 510 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCC-------------------------------------------
Confidence 4456678999999999999999999998885421110
Q ss_pred ccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhH-hhhhhccCCCCCChhhHHHHHHH
Q 004760 519 SVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQAL-KILIGSVGSKSNKVPYVKEILEF 597 (732)
Q Consensus 519 ~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~L-k~li~~~G~~~~~~~y~k~il~~ 597 (732)
.....+++.|++...... +. +++.+.+
T Consensus 511 --------------------------------------~~pvQ~IfaGKAhP~d~~gK~-------------iIk~i~~- 538 (778)
T cd04299 511 --------------------------------------ERPVQFIFAGKAHPADEPGKE-------------LIQEIVE- 538 (778)
T ss_pred --------------------------------------CCCeEEEEEEecCccchHHHH-------------HHHHHHH-
Confidence 011467788887432222 22 2233333
Q ss_pred HHhcCCCCCcEEEcc-chhh-HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECC
Q 004760 598 LSQHSNLSKAMLWTP-ATTR-VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675 (732)
Q Consensus 598 l~~~l~l~~~V~f~G-~~~d-v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~ 675 (732)
+++......+|.|+. +-.. ...++++||++++||+.-.|+.|+.-+=||.-|.+-+++--|-..|.. ++.||+.+..
T Consensus 539 ~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~ 617 (778)
T cd04299 539 FSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGD 617 (778)
T ss_pred HHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCC
Confidence 334446667888875 4333 557899999999999755999999999999999999999999998887 6789999977
Q ss_pred CC----------CcHHHHHHHHHH-Hh----c-----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 676 GH----------PGAQVLAQNLRY-LL----K-----NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 676 ~d----------~~~e~La~aL~~-LL----~-----n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
++ .++++|.+.|++ ++ + .|..+.+|.+++...+...|++++|+++|.+-++.
T Consensus 618 ~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 618 GDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 22 344778888864 33 3 27788899999988888899999999999887653
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.1e-07 Score=110.23 Aligned_cols=268 Identities=11% Similarity=0.137 Sum_probs=175.5
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCc--cccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPA--VVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGL 439 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~--~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl 439 (732)
.+.+-|........+...|... ..+.+... .+.+...+....|.+.|-|+|...|......+..+.....+++.++-
T Consensus 258 aDlIGFht~~yar~Fl~~~~r~-lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~ 336 (854)
T PLN02205 258 SDLIGFHTFDYARHFLSCCSRM-LGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD 336 (854)
T ss_pred CCeEEecCHHHHHHHHHHHHHH-hCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc
Confidence 7888888888777677766332 11221111 01122233455678999999998774321111001112456666652
Q ss_pred CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccc
Q 004760 440 TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELS 519 (732)
Q Consensus 440 ~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~ 519 (732)
++..+|+.+.|+...||+..=++|+..+.+++|+ ++|+..+
T Consensus 337 -~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~------------------------~~gkvvl-------------- 377 (854)
T PLN02205 337 -QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPE------------------------WQGKVVL-------------- 377 (854)
T ss_pred -CCCEEEEEccCcccccCHHHHHHHHHHHHHhCcc------------------------ccCCEEE--------------
Confidence 2467999999999999999999999999999998 3333332
Q ss_pred cchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHH
Q 004760 520 VSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLS 599 (732)
Q Consensus 520 ~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~ 599 (732)
.|..+|. -+++++.++++.-+ .++...+-
T Consensus 378 ------vQia~ps--------------------------------r~~~~~y~~~~~ev-------------~~~v~rIN 406 (854)
T PLN02205 378 ------VQIANPA--------------------------------RGKGKDVKEVQAET-------------HSTVKRIN 406 (854)
T ss_pred ------EEEecCC--------------------------------CcccHHHHHHHHHH-------------HHHHHHHH
Confidence 1111110 02233344444332 34444554
Q ss_pred hcCCCCC--cEEEcc---chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC-------------------CEEEc
Q 004760 600 QHSNLSK--AMLWTP---ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-------------------PVLGT 655 (732)
Q Consensus 600 ~~l~l~~--~V~f~G---~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl-------------------PVI~t 655 (732)
..++..+ .|+++. ..+++..+|+.||++++++. -+|+-++..|+.||.. .+|.|
T Consensus 407 ~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~l--RDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLS 484 (854)
T PLN02205 407 ETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAV--RDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVS 484 (854)
T ss_pred hhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccc--cccccccchheeEEccCccccccccccccccCCCCceEee
Confidence 5555432 355553 23789999999999999996 9999999999999854 36777
Q ss_pred CCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 656 DAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP-SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 656 d~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~-~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
...|....+. ..++++|-|. +++|++|.+.+..+ +.++..-+..++.+. .++...+++.+++-++.+
T Consensus 485 EfaGaa~~L~---~Ai~VNP~d~--~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~-~~d~~~W~~~fl~~l~~~ 552 (854)
T PLN02205 485 EFIGCSPSLS---GAIRVNPWNI--DAVADAMDSALEMAEPEKQLRHEKHYRYVS-THDVGYWARSFLQDLERT 552 (854)
T ss_pred eccchhHHhC---cCeEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHH
Confidence 7777766664 3688999998 99999999999854 444444445555555 589999999998877665
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.7e-08 Score=91.98 Aligned_cols=145 Identities=17% Similarity=0.165 Sum_probs=76.5
Q ss_pred EEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEc-----CCCc--h---------hhhh
Q 004760 246 ILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED-----RGEP--S---------FKTS 309 (732)
Q Consensus 246 llI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~-----~~~~--~---------~~~~ 309 (732)
+...+....||+++++++||++|.++||+|++++....+....+ .+..... .... . +.++
T Consensus 3 i~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 78 (177)
T PF13439_consen 3 ITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE----LVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKK 78 (177)
T ss_dssp EECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST----EEEE---TT-SSTSS--HHHHHHHHHHHHHHH
T ss_pred EEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh----ccceeeeeecccccccchhHHHHHHHHHHHHH
Confidence 44455567899999999999999999999999996555544333 1111110 0000 0 2336
Q ss_pred cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh------------HhHHH--hhhhhccccEEEEecHHhHHH
Q 004760 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------------EYFDR--AKLVLDRVKLLVFLSESQTKQ 375 (732)
Q Consensus 310 ~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~------------~~~~~--~~~~l~r~~~li~vS~~~~~~ 375 (732)
.+||+||++......+.. ++.. ..++++.+|..-. ..+.. ......+.+.++++|+...+.
T Consensus 79 ~~~DiVh~~~~~~~~~~~--~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~ 153 (177)
T PF13439_consen 79 EKPDIVHIHGPPAFWIAL--LACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDE 153 (177)
T ss_dssp HT-SEEECCTTHCCCHHH--HHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHH
T ss_pred cCCCeEEecccchhHHHH--Hhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHH
Confidence 799999888755433322 2212 4447777754320 11111 122345689999999997553
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSS 418 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~ 418 (732)
. .+.+..+ ..+.+||||+|++.|.
T Consensus 154 ----l----~~~~~~~-----------~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 154 ----L----IKFGIPP-----------EKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ----H----HHHT--S-----------S-EEE----B-CCCH-
T ss_pred ----H----HHhCCcc-----------cCCEEEECCccHHHcC
Confidence 2 2223332 2459999999999873
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-06 Score=97.92 Aligned_cols=264 Identities=16% Similarity=0.201 Sum_probs=166.5
Q ss_pred ccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC
Q 004760 362 VKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD 441 (732)
Q Consensus 362 ~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~ 441 (732)
.+.+-|..+.....+...|....-..+... +..-+..+....|..+|-|+|++.|......+.-+..-..+++.++ .
T Consensus 204 ~dligFqt~~y~~nF~~~~~r~~~~~~~~~-~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~ 280 (486)
T COG0380 204 ADLIGFQTESYARNFLDLCSRLLGVTGDAD-IRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--R 280 (486)
T ss_pred CCeeEecCHHHHHHHHHHHHHhcccccccc-ccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--C
Confidence 788888888877666666643321000000 0000012345677889999999887532211100001145566665 3
Q ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccc
Q 004760 442 QDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVS 521 (732)
Q Consensus 442 ~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~ 521 (732)
+..+|+.+.|+..-||...=+.|+.++.+++|.. +|..++
T Consensus 281 ~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~------------------------~~kvvl---------------- 320 (486)
T COG0380 281 NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEW------------------------RGKVVL---------------- 320 (486)
T ss_pred CceEEEEehhcccccCcHHHHHHHHHHHHhChhh------------------------hCceEE----------------
Confidence 3678999999999999999999999999999972 222222
Q ss_pred hhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCc--hhhhhHhhhhhccCCCCCChhhHHHHHHHHH
Q 004760 522 SESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDG--KQQQALKILIGSVGSKSNKVPYVKEILEFLS 599 (732)
Q Consensus 522 ~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G--~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~ 599 (732)
+|...| .++ ...+.+... +++....+-
T Consensus 321 ----iQi~~p----------------------------------Sr~~v~~y~~~~~~-------------i~~~V~rIN 349 (486)
T COG0380 321 ----LQIAPP----------------------------------SREDVEEYQALRLQ-------------IEELVGRIN 349 (486)
T ss_pred ----EEecCC----------------------------------CccccHHHHHHHHH-------------HHHHHHHHH
Confidence 000111 111 101111111 122222332
Q ss_pred hcCCCCC--cEEEcc---chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHc----CCCEEEcCCCChhhhhccCceE
Q 004760 600 QHSNLSK--AMLWTP---ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF----GVPVLGTDAGGTKEIVEHNVTG 670 (732)
Q Consensus 600 ~~l~l~~--~V~f~G---~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~----GlPVI~td~gG~~EiVe~g~~G 670 (732)
..+|... -|+|+- ..+++..+|..||+++++|- -||+-+|..|+.|| +-|.|.|...|....+.+ .
T Consensus 350 ~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtpl--rDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---A 424 (486)
T COG0380 350 GEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPL--RDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---A 424 (486)
T ss_pred hhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccc--cccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---C
Confidence 3333221 233332 23789999999999999996 99999999999998 346777777776666664 6
Q ss_pred EEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 671 LLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 671 ll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
++++|-|. +.+|++|...|. .++.+++.-+..++.+. .++.++++..+++-+..
T Consensus 425 liVNP~d~--~~va~ai~~AL~m~~eEr~~r~~~~~~~v~-~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 425 LIVNPWDT--KEVADAIKRALTMSLEERKERHEKLLKQVL-THDVARWANSFLDDLAQ 479 (486)
T ss_pred EeECCCCh--HHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 88999998 999999999998 45555555555566665 48999999999887764
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-06 Score=92.78 Aligned_cols=77 Identities=23% Similarity=0.228 Sum_probs=55.4
Q ss_pred eEEEEeCCCCCCc--HHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc----------hhhhhcC
Q 004760 244 KFILIFHELSMTG--APLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP----------SFKTSMK 311 (732)
Q Consensus 244 kIllI~h~ls~gG--A~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~----------~~~~~~k 311 (732)
||++..+.-.--| =-.-++.||.+|.+.|++|.+++-...+.+.+.+...|.+|+..+... .+....+
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~ 80 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEEEK 80 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcC
Confidence 4566666554333 334488999999999999999995555556678889999998775532 1344669
Q ss_pred ccEEEeCCc
Q 004760 312 ADLVIAGSA 320 (732)
Q Consensus 312 ~DlVia~Sa 320 (732)
||+||+.+.
T Consensus 81 ~d~vV~D~y 89 (279)
T TIGR03590 81 FDILIVDHY 89 (279)
T ss_pred CCEEEEcCC
Confidence 999988763
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.3e-07 Score=104.94 Aligned_cols=91 Identities=18% Similarity=0.356 Sum_probs=79.4
Q ss_pred CCcEEEccchh-hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCcHHH
Q 004760 605 SKAMLWTPATT-RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 605 ~~~V~f~G~~~-dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
++.+.+.|+.. ++.++|..||+++..|. +|++++++.||+..|+|+++.+. -|..+++.+ |.+++.+++ ++
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~--~~ 400 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEV--DQ 400 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCH--HH
Confidence 56788888776 99999999999999998 99999999999999999999987 456677775 789999998 99
Q ss_pred HHHHHHHHhcCHHHHHHHHH
Q 004760 683 LAQNLRYLLKNPSVRERMAM 702 (732)
Q Consensus 683 La~aL~~LL~n~~~r~~m~~ 702 (732)
|+++|..++.+++..++.-.
T Consensus 401 m~~~i~~lL~d~~~~~~~~~ 420 (438)
T TIGR02919 401 LISKLKDLLNDPNQFRELLE 420 (438)
T ss_pred HHHHHHHHhcCHHHHHHHHH
Confidence 99999999999976655433
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-05 Score=87.60 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=71.9
Q ss_pred cEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh---hhhhccC----ceEEEECCCCCc
Q 004760 607 AMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT---KEIVEHN----VTGLLHPPGHPG 679 (732)
Q Consensus 607 ~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~---~EiVe~g----~~Gll~~~~d~~ 679 (732)
.+.+..+..++..+|++||++|..| |.+..|++++|+|+|.....+. ..+.+.. ..++.....+.
T Consensus 280 ~~~v~~~~~~~~~~l~~ADlvI~rS-------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~- 351 (396)
T TIGR03492 280 TLEVLLGRGAFAEILHWADLGIAMA-------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNP- 351 (396)
T ss_pred ceEEEechHhHHHHHHhCCEEEECc-------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCH-
Confidence 4666677789999999999999877 3566999999999999874332 2222321 13444455555
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYK 719 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~ 719 (732)
+.+++.+..+++|++.+++|.+++++...+....+++++
T Consensus 352 -~~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~ 390 (396)
T TIGR03492 352 -EQAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAE 390 (396)
T ss_pred -HHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 899999999999999988887555444333233333333
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.9e-05 Score=83.64 Aligned_cols=92 Identities=26% Similarity=0.172 Sum_probs=68.8
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
..+++|.+.++. +...+|..||++|. -+...++.||+++|+|+|+....+ ..+.++....|...+..+.
T Consensus 285 ~~~~~v~~~~~~-p~~~ll~~~d~~I~------hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 285 DLPDNVRVVDFV-PHDWLLPRCAAVVH------HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred CCCCceEEeCCC-CHHHHhhhhheeee------cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 456789999987 47789999999993 345679999999999999986654 3445555557777666655
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAM 702 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~ 702 (732)
+.+.+++++.++++++ .++++.+
T Consensus 358 ~~~~l~~al~~~l~~~-~~~~~~~ 380 (401)
T cd03784 358 TAERLAAALRRLLDPP-SRRRAAA 380 (401)
T ss_pred CHHHHHHHHHHHhCHH-HHHHHHH
Confidence 5699999999999854 4444443
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.4e-05 Score=82.14 Aligned_cols=80 Identities=25% Similarity=0.248 Sum_probs=61.7
Q ss_pred CCcEEEccch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh------hhccCceEEEECCCC
Q 004760 605 SKAMLWTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE------IVEHNVTGLLHPPGH 677 (732)
Q Consensus 605 ~~~V~f~G~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E------iVe~g~~Gll~~~~d 677 (732)
.++|.+.++. .++.++|.+||++|... .-.++.||+++|+|+|.-...+..| .+++...|...+..+
T Consensus 231 ~~ni~~~~~~~~~~~~~m~~ad~vIs~~------G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~ 304 (318)
T PF13528_consen 231 PGNIHVRPFSTPDFAELMAAADLVISKG------GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQED 304 (318)
T ss_pred CCCEEEeecChHHHHHHHHhCCEEEECC------CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEccccc
Confidence 4689999976 89999999999999554 3446999999999999987755333 344556677776666
Q ss_pred CcHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYL 690 (732)
Q Consensus 678 ~~~e~La~aL~~L 690 (732)
.+.+.|+++|+++
T Consensus 305 ~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 305 LTPERLAEFLERL 317 (318)
T ss_pred CCHHHHHHHHhcC
Confidence 6668888888764
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00016 Score=80.11 Aligned_cols=101 Identities=21% Similarity=0.283 Sum_probs=72.5
Q ss_pred CcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHH
Q 004760 606 KAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVL 683 (732)
Q Consensus 606 ~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~L 683 (732)
++|.+++.. .++..+++.||++|..|. .| +.||.++|+|||. .+.-+|.++.+.+.+++. .|. +++
T Consensus 262 ~~v~l~~~l~~~~~l~Ll~~a~~vitdSS-----gg--i~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg-~~~--~~I 329 (365)
T TIGR03568 262 PNFRLFKSLGQERYLSLLKNADAVIGNSS-----SG--IIEAPSFGVPTIN--IGTRQKGRLRADSVIDVD-PDK--EEI 329 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCEEEEcCh-----hH--HHhhhhcCCCEEe--ecCCchhhhhcCeEEEeC-CCH--HHH
Confidence 579999864 799999999999997773 23 3899999999994 467888888887887773 344 889
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 684 AQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 684 a~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
.+++..++ ++..++.+. ....-|-.-+.+++++++
T Consensus 330 ~~a~~~~~-~~~~~~~~~-----~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 330 VKAIEKLL-DPAFKKSLK-----NVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHh-ChHHHHHHh-----hCCCCCCCChHHHHHHHh
Confidence 99999854 444333331 112346666677776664
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00019 Score=78.75 Aligned_cols=78 Identities=17% Similarity=0.088 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch------------------hhhhcCccEEEeCCch
Q 004760 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS------------------FKTSMKADLVIAGSAV 321 (732)
Q Consensus 260 ~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~------------------~~~~~k~DlVia~Sav 321 (732)
..-.++++|.+.||+|.+.+ .+.+...+-|...|+++.+.+.... +..+++||++++....
T Consensus 15 fFk~~I~eL~~~GheV~it~-R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~ 93 (335)
T PF04007_consen 15 FFKNIIRELEKRGHEVLITA-RDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAISFGSP 93 (335)
T ss_pred HHHHHHHHHHhCCCEEEEEE-eccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcH
Confidence 35589999999999999998 4556667777889999887654333 2237899999877654
Q ss_pred hhHHHHHHHHhhcCCCccEEEE
Q 004760 322 CATWIDQYITRFPAGGSQVVWW 343 (732)
Q Consensus 322 ~~~~i~~~i~~~~~~~~~ivw~ 343 (732)
.+ ...++..|.|.+++.
T Consensus 94 ~a-----~~va~~lgiP~I~f~ 110 (335)
T PF04007_consen 94 EA-----ARVAFGLGIPSIVFN 110 (335)
T ss_pred HH-----HHHHHHhCCCeEEEe
Confidence 43 334566777755543
|
They are found in archaea and some bacteria and have no known function. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.7e-06 Score=76.99 Aligned_cols=117 Identities=19% Similarity=0.156 Sum_probs=65.0
Q ss_pred CcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch---------------hh--hhcCccEEEe
Q 004760 255 TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------FK--TSMKADLVIA 317 (732)
Q Consensus 255 gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------~~--~~~k~DlVia 317 (732)
||++..+.+||++|.++||+|++++....+. ..+....++.+...+.... +. ...+||+||+
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~ 79 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPE-DDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHA 79 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GG-G-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCc-ccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEe
Confidence 7999999999999999999999999655443 2234467888776543322 22 4679999999
Q ss_pred CCchhhHHHHHHHHhhcCCCccEEEEEeech--------hHhHHH-hhhhhccccEEEEecHHhHHH
Q 004760 318 GSAVCATWIDQYITRFPAGGSQVVWWIMENR--------REYFDR-AKLVLDRVKLLVFLSESQTKQ 375 (732)
Q Consensus 318 ~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r--------~~~~~~-~~~~l~r~~~li~vS~~~~~~ 375 (732)
++.. ......++....+.+ ++..+|... ..++.. ....+.+++.++++|+...+.
T Consensus 80 ~~~~--~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 143 (160)
T PF13579_consen 80 HSPT--AGLVAALARRRRGIP-LVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRRY 143 (160)
T ss_dssp EHHH--HHHHHHHHHHHHT---EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHHH
T ss_pred cccc--hhHHHHHHHHccCCc-EEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 8732 223333333233444 566665421 111111 224455599999999997553
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0001 Score=81.39 Aligned_cols=113 Identities=19% Similarity=0.238 Sum_probs=78.7
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCCc
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~~ 679 (732)
++++|.+.++... ..+|..||++|..+ ...++.||+++|+|+|+....+ ..+.+.+...|......+.+
T Consensus 273 ~~~~v~~~~~~p~-~~ll~~~~~~I~hg------G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 273 LPPNVEVRQWVPQ-LEILKKADAFITHG------GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred CCCCeEEeCCCCH-HHHHhhCCEEEECC------CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 4467888888754 48999999999655 2348899999999999976543 33445555577777666656
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
.+.++++|++++.|++.++.+.+- ++.+...-..+..++.+.++
T Consensus 346 ~~~l~~ai~~~l~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 346 AEKLREAVLAVLSDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 689999999999999866665433 33344444555555555444
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0018 Score=74.53 Aligned_cols=339 Identities=14% Similarity=0.116 Sum_probs=195.2
Q ss_pred hhccCCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCC-CCh-hHHHhCCcEEEEcCC--Cchh---hhhc
Q 004760 238 RFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG-GLM-PELARRKIKVLEDRG--EPSF---KTSM 310 (732)
Q Consensus 238 ~~~~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g-~l~-~el~~~gI~v~~~~~--~~~~---~~~~ 310 (732)
+-.+..||=+|+|+|.-.-....+..+-+.+.+..++|.++.+...+ ... ..+...=-+++..+. +... ...-
T Consensus 255 ~~~~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~~~dd~e~a~~I~~d 334 (620)
T COG3914 255 RNGKRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIGRMDDAEIANAIRTD 334 (620)
T ss_pred ccccceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccCCcCHHHHHHHHHhc
Confidence 44556899999999999988899999999999999999999876322 222 222222223444432 1112 1244
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhh-hhhcc--ccEEEEecHHhHHHhhhHHHhhhhhc
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAK-LVLDR--VKLLVFLSESQTKQWLTWCEEEKLKL 387 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~-~~l~r--~~~li~vS~~~~~~~~~~~~~e~i~l 387 (732)
..||.+--+.+...-..+.++|.++... +-| .- |+.... ...++ .+.. ++.+..-.+ +.+.-+++
T Consensus 335 ~IdILvDl~g~T~d~r~~v~A~RpAPiq-vsw-lG-----y~aT~g~p~~DY~I~D~y-~vPp~ae~y----ysEkl~RL 402 (620)
T COG3914 335 GIDILVDLDGHTVDTRCQVFAHRPAPIQ-VSW-LG-----YPATTGSPNMDYFISDPY-TVPPTAEEY----YSEKLWRL 402 (620)
T ss_pred CCeEEEeccCceeccchhhhhcCCCceE-Eee-cc-----cccccCCCcceEEeeCce-ecCchHHHH----HHHHHHhc
Confidence 6777765544444334466777776542 444 31 111111 11111 1111 111221111 22222222
Q ss_pred c--CCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHH
Q 004760 388 R--SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESA 465 (732)
Q Consensus 388 ~--~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~ 465 (732)
. ++| ++. +..+. |... |.++||+++.+++++.++ ..|-...+++-+
T Consensus 403 p~cy~p-------~d~--~~~v~----------p~~s-----------R~~lglp~~avVf~c~~n--~~K~~pev~~~w 450 (620)
T COG3914 403 PQCYQP-------VDG--FEPVT----------PPPS-----------RAQLGLPEDAVVFCCFNN--YFKITPEVFALW 450 (620)
T ss_pred ccccCC-------CCC--cccCC----------CCcc-----------hhhcCCCCCeEEEEecCC--cccCCHHHHHHH
Confidence 2 112 111 00111 2222 788999999877666655 456666777777
Q ss_pred HHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCccccc
Q 004760 466 QLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSI 545 (732)
Q Consensus 466 ~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~ 545 (732)
..+.+.-|++
T Consensus 451 mqIL~~vP~S---------------------------------------------------------------------- 460 (620)
T COG3914 451 MQILSAVPNS---------------------------------------------------------------------- 460 (620)
T ss_pred HHHHHhCCCc----------------------------------------------------------------------
Confidence 7777777761
Q ss_pred CCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC-CcEEEccch--hhHHHHHH
Q 004760 546 GNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS-KAMLWTPAT--TRVASLYS 622 (732)
Q Consensus 546 ~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~-~~V~f~G~~--~dv~~lys 622 (732)
.+++.+.|+ ++.++..++.+.+..|+. ++++|.+.. ++..+.|.
T Consensus 461 ---------------vl~L~~~~~------------------~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~ 507 (620)
T COG3914 461 ---------------VLLLKAGGD------------------DAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYG 507 (620)
T ss_pred ---------------EEEEecCCC------------------cHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhc
Confidence 233334431 233445555666666875 789999854 67889999
Q ss_pred HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC-----hhhhhc-cCceEEEECCCCCcHHHHHHHHHHHhcCHHH
Q 004760 623 AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG-----TKEIVE-HNVTGLLHPPGHPGAQVLAQNLRYLLKNPSV 696 (732)
Q Consensus 623 aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG-----~~EiVe-~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~ 696 (732)
-||+++-+. .-+-..+.+||+-+|+|||+--..- ..-++. -|..-+++... ++..+.-..+-.|...
T Consensus 508 iADlvLDTy---PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~----~dYV~~av~~g~dral 580 (620)
T COG3914 508 IADLVLDTY---PYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSR----ADYVEKAVAFGSDRAL 580 (620)
T ss_pred hhheeeecc---cCCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCCH----HHHHHHHHHhcccHHH
Confidence 999999776 4466789999999999999853210 111222 23333444322 4455555556567766
Q ss_pred HHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHhhc
Q 004760 697 RERMAMEGRKKVER--MYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 697 r~~m~~~~r~~v~~--~ys~~~~~~~~~ev~~~~l~ 730 (732)
+++....-....+. -|+.+.++.++.++|....+
T Consensus 581 ~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 581 RQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 76665544444333 68899999999999987654
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00011 Score=83.61 Aligned_cols=119 Identities=15% Similarity=0.233 Sum_probs=76.9
Q ss_pred CCC-CcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh-----hhc-cCceEEEE
Q 004760 603 NLS-KAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE-----IVE-HNVTGLLH 673 (732)
Q Consensus 603 ~l~-~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E-----iVe-~g~~Gll~ 673 (732)
|++ +++.|.+.. ++....|..+|+++=+. .-+-+.+.+||+.+|+|||+-....... ++. -|-.-+++
T Consensus 338 Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~---p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 338 GVDPDRIIFSPVAPREEHLRRYQLADICLDTF---PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp TS-GGGEEEEE---HHHHHHHGGG-SEEE--S---SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred CCChhhEEEcCCCCHHHHHHHhhhCCEEeeCC---CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 664 789998854 55667789999999876 4467899999999999999875422111 121 12222333
Q ss_pred CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHh
Q 004760 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVE--RMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 674 ~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~--~~ys~~~~~~~~~ev~~~~ 728 (732)
. +. +++.+.-.+|..|++.++++.+.-++... .-|+-..+++++.+.|+++
T Consensus 415 ~--s~--~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SE--EEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SH--HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CH--HHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 23 78888889999999999999988887764 4589999999999999875
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0032 Score=70.89 Aligned_cols=116 Identities=18% Similarity=0.131 Sum_probs=82.3
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC----ChhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG----GTKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g----G~~EiVe~g~~Gll~~~~d~ 678 (732)
++++++...++.. ..+++..||++|... --.++.||+.+|+|+|+-..+ ...+-+++-.+|...+....
T Consensus 281 ~~p~n~~v~~~~p-~~~~l~~ad~vI~hG------G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l 353 (406)
T COG1819 281 NVPDNVIVADYVP-QLELLPRADAVIHHG------GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEEL 353 (406)
T ss_pred cCCCceEEecCCC-HHHHhhhcCEEEecC------CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccC
Confidence 6778888888763 346999999999655 445899999999999997554 35666777788988886555
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
..+.+++++++++.|++.++...+. .+.+.+.-..+++++.+.+...
T Consensus 354 ~~~~l~~av~~vL~~~~~~~~~~~~-~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 354 TEERLRAAVNEVLADDSYRRAAERL-AEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHH-HHHhhhcccHHHHHHHHHHHHh
Confidence 5699999999999998876654333 3333333444444444444443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00097 Score=62.26 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=65.6
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch-------------hhhhc
Q 004760 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS-------------FKTSM 310 (732)
Q Consensus 244 kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~-------------~~~~~ 310 (732)
|||+|.... +..++++|++|.+.|++|.++++.... .......+++++..+.... +.++.
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~--~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~ 73 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDY--EKYEIIEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKE 73 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCc--hhhhHhCCeEEEEecCCCCccHHHHHHHHHHHHhccC
Confidence 678887766 457899999999999999999963332 4444578999888763322 23377
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEee
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIME 346 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e 346 (732)
+||+||+|+..... +.+.++....+..++++.+|.
T Consensus 74 ~~DvIh~h~~~~~~-~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 74 KPDVIHCHTPSPYG-LFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred CCCEEEEecCChHH-HHHHHHHHHcCCCCEEEEecC
Confidence 99999999875443 334444445554557777753
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0092 Score=65.53 Aligned_cols=128 Identities=10% Similarity=0.142 Sum_probs=84.1
Q ss_pred CCChhhHHHHHHHHHhcCCCCCcEEEc-cch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChh
Q 004760 585 SNKVPYVKEILEFLSQHSNLSKAMLWT-PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTK 661 (732)
Q Consensus 585 ~~~~~y~k~il~~l~~~l~l~~~V~f~-G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~ 661 (732)
.+...|++++.+...+..+- +++..+ .+. +|+.++++.||+.+++.. ..+++|+.++ .+.+|+||+.+......
T Consensus 225 ~~n~~Yi~~V~~~~~~lF~~-~~~~iL~e~mpf~eYl~lL~~cDl~if~~~-RQQgiGnI~l-Ll~~G~~v~L~~~np~~ 301 (360)
T PF07429_consen 225 ANNQAYIQQVIQAGKELFGA-ENFQILTEFMPFDEYLALLSRCDLGIFNHN-RQQGIGNICL-LLQLGKKVFLSRDNPFW 301 (360)
T ss_pred CchHHHHHHHHHHHHHhcCc-cceeEhhhhCCHHHHHHHHHhCCEEEEeec-hhhhHhHHHH-HHHcCCeEEEecCChHH
Confidence 34456777777776665443 456554 333 899999999999999887 3889997655 99999999999887766
Q ss_pred hhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 662 EIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 662 EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
..+.+..--+++..++.+...++++=+++.. |++ . --|.-..+.+.+.+.+..+
T Consensus 302 ~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk~-----------~--iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 302 QDLKEQGIPVLFYGDELDEALVREAQRQLANVDKQ-----------Q--IAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred HHHHhCCCeEEeccccCCHHHHHHHHHHHhhCccc-----------c--eeeeCCchHHHHHHHHHHH
Confidence 6665433445565555554566655555533 211 1 1255566666666666554
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.042 Score=61.49 Aligned_cols=76 Identities=26% Similarity=0.335 Sum_probs=53.2
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC-----------------hhhhhccCceEEEECC--
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG-----------------TKEIVEHNVTGLLHPP-- 675 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG-----------------~~EiVe~g~~Gll~~~-- 675 (732)
.+-.++|++||+.+..| |.+++|++.+|+|.|+.--.+ ++.++-+. -++|.
T Consensus 252 ~~~~~~m~~ad~al~~S-------GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~---~v~PEli 321 (373)
T PF02684_consen 252 GESYDAMAAADAALAAS-------GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGR---EVVPELI 321 (373)
T ss_pred CchHHHHHhCcchhhcC-------CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCC---Ccchhhh
Confidence 46778999999998777 789999999999998864322 22222211 01111
Q ss_pred -CCCcHHHHHHHHHHHhcCHHHHHHH
Q 004760 676 -GHPGAQVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 676 -~d~~~e~La~aL~~LL~n~~~r~~m 700 (732)
++.+++.+++.+..++.|++.++..
T Consensus 322 Q~~~~~~~i~~~~~~ll~~~~~~~~~ 347 (373)
T PF02684_consen 322 QEDATPENIAAELLELLENPEKRKKQ 347 (373)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHHHH
Confidence 3445699999999999999875443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.022 Score=63.35 Aligned_cols=81 Identities=26% Similarity=0.272 Sum_probs=56.4
Q ss_pred hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-----------------CChhhhhccCceEEEECC---
Q 004760 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-----------------GGTKEIVEHNVTGLLHPP--- 675 (732)
Q Consensus 616 dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-----------------gG~~EiVe~g~~Gll~~~--- 675 (732)
+-.+.|.+||+.+..| |.+++|+|.+|+|.|++-- -+++.++-+. .++|.
T Consensus 257 ~~~~a~~~aD~al~aS-------GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~---~ivPEliq 326 (381)
T COG0763 257 EKRKAFAAADAALAAS-------GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR---EIVPELIQ 326 (381)
T ss_pred hHHHHHHHhhHHHHhc-------cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC---ccchHHHh
Confidence 5668999999988776 7899999999999988632 2233333221 12221
Q ss_pred CCCcHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRK 706 (732)
Q Consensus 676 ~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~ 706 (732)
.+..++.+++++..++.|...++++.+...+
T Consensus 327 ~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~ 357 (381)
T COG0763 327 EDCTPENLARALEELLLNGDRREALKEKFRE 357 (381)
T ss_pred hhcCHHHHHHHHHHHhcChHhHHHHHHHHHH
Confidence 2334599999999999999766666555443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.023 Score=61.75 Aligned_cols=130 Identities=9% Similarity=0.149 Sum_probs=89.1
Q ss_pred CCChhhHHHHHHHHHhcCCCCCcEEEcc-c--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CCh
Q 004760 585 SNKVPYVKEILEFLSQHSNLSKAMLWTP-A--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGT 660 (732)
Q Consensus 585 ~~~~~y~k~il~~l~~~l~l~~~V~f~G-~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~ 660 (732)
.++..|++++.+...+..+. +++..+- . .+++.++++.||+.++.-. ..+++|+.++ .+.+|+||+.+.. +-.
T Consensus 186 ~gn~~Yi~~V~~~~~~lF~~-~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~-RQQgiGnl~l-Li~~G~~v~l~r~n~fw 262 (322)
T PRK02797 186 ANNQAYIEEVRQAGLALFGA-ENFQILTEKLPFDDYLALLRQCDLGYFIFA-RQQGIGTLCL-LIQLGKPVVLSRDNPFW 262 (322)
T ss_pred CCCHHHHHHHHHHHHHhcCc-ccEEehhhhCCHHHHHHHHHhCCEEEEeec-hhhHHhHHHH-HHHCCCcEEEecCCchH
Confidence 34567888888888777654 4555554 2 3899999999999888765 3889997666 9999999999855 556
Q ss_pred hhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 661 KEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 661 ~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
.++.+++.. ++++.++.+...+.+ .+++|....++.+. |+.+.+.+.+.++++.+..
T Consensus 263 qdl~e~gv~-Vlf~~d~L~~~~v~e----------~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 263 QDLTEQGLP-VLFTGDDLDEDIVRE----------AQRQLASVDKNIIA--FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred HHHHhCCCe-EEecCCcccHHHHHH----------HHHHHHhhCcceee--ecCHhHHHHHHHHHHHhhC
Confidence 666666543 445544432233322 23444444444443 9999999999999987653
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.047 Score=59.25 Aligned_cols=173 Identities=18% Similarity=0.163 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch-------------------hhhhcCccEEEeCCc
Q 004760 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS-------------------FKTSMKADLVIAGSA 320 (732)
Q Consensus 260 ~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~-------------------~~~~~k~DlVia~Sa 320 (732)
..-++..+|.+.||+|.+.+ -+.+.+.+-|+-.|+.+.+...... +...++||+.+.-.
T Consensus 15 fFk~lI~elekkG~ev~iT~-rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~i~~~- 92 (346)
T COG1817 15 FFKNLIWELEKKGHEVLITC-RDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVAIGKH- 92 (346)
T ss_pred HHHHHHHHHHhCCeEEEEEE-eecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceEeecC-
Confidence 46688999999999999988 6677788888889998877665542 33388999997621
Q ss_pred hhhHHHHHHHHh--hcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccC
Q 004760 321 VCATWIDQYITR--FPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSV 398 (732)
Q Consensus 321 v~~~~i~~~i~~--~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~ 398 (732)
..++++ |..+.+.++.. ..++.....+.++...+.++.-.... .....|| |..|. .+..
T Consensus 93 ------s~~l~rvafgLg~psIi~~---D~ehA~~qnkl~~Pla~~ii~P~~~~-~~~~~~~-------G~~p~--~i~~ 153 (346)
T COG1817 93 ------SPELPRVAFGLGIPSIIFV---DNEHAEAQNKLTLPLADVIITPEAID-EEELLDF-------GADPN--KISG 153 (346)
T ss_pred ------CcchhhHHhhcCCceEEec---CChhHHHHhhcchhhhhheecccccc-hHHHHHh-------CCCcc--ceec
Confidence 122333 44455544332 22333333334444445455544332 1122233 55441 0000
Q ss_pred CCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEE-EEEE-----ecCCCCCCHHHHHHHHHHhH
Q 004760 399 NDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDML-VLSL-----SSINPGKGQLLLVESAQLMI 469 (732)
Q Consensus 399 n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~l-il~v-----Gri~~~KG~d~LLeA~~~l~ 469 (732)
...++.+ .+...|.|++ .+-+++|+.+++.. ++=. ...+..++.+.+.+++..+.
T Consensus 154 ~~giae~------~~v~~f~pd~----------evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~ 214 (346)
T COG1817 154 YNGIAEL------ANVYGFVPDP----------EVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELK 214 (346)
T ss_pred ccceeEE------eecccCCCCH----------HHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHH
Confidence 1111222 2233466664 35678999886544 3321 12335666666777777663
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.046 Score=60.19 Aligned_cols=83 Identities=20% Similarity=0.225 Sum_probs=60.8
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC--CChhhhhcc------CceEEEECCC
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA--GGTKEIVEH------NVTGLLHPPG 676 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~--gG~~EiVe~------g~~Gll~~~~ 676 (732)
.++|...-+..++..|+.+|+..|.-+ -=+++.|-+.+|+|.+.-.. ++-..++.. |-..++ .++
T Consensus 276 ~p~i~I~~f~~~~~~ll~gA~~vVSm~------GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe 348 (400)
T COG4671 276 RPHISIFEFRNDFESLLAGARLVVSMG------GYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPE 348 (400)
T ss_pred CCCeEEEEhhhhHHHHHHhhheeeecc------cchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-Ccc
Confidence 367889999999999999999999433 33689999999999887654 444333321 333444 445
Q ss_pred CCcHHHHHHHHHHHhcCH
Q 004760 677 HPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~ 694 (732)
+.+++.||++|..++.-|
T Consensus 349 ~lt~~~La~al~~~l~~P 366 (400)
T COG4671 349 NLTPQNLADALKAALARP 366 (400)
T ss_pred cCChHHHHHHHHhcccCC
Confidence 666799999999998844
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00026 Score=69.03 Aligned_cols=93 Identities=19% Similarity=0.232 Sum_probs=62.9
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC--------hhhhhccCceEEEECCCC
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG--------TKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG--------~~EiVe~g~~Gll~~~~d 677 (732)
.+|.+.++.+++.++|+.||++|.- +.+.++.|++++|+|.|.-...+ ....+.....|......+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDlvIs~------aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~ 128 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADLVISH------AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE 128 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSEEEEC------S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred CcEEEEechhhHHHHHHHcCEEEeC------CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence 6899999999999999999988833 46779999999999998765544 222333333444443333
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERMAMEG 704 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m~~~~ 704 (732)
.+.+.|.++|..++.++..+..|..+.
T Consensus 129 ~~~~~L~~~i~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 129 LNPEELAEAIEELLSDPEKLKEMAKAA 155 (167)
T ss_dssp -SCCCHHHHHHCHCCCHH-SHHHCCCH
T ss_pred CCHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 223789999999999998877765543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.17 Score=56.49 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=79.6
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCc
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
+-.++|.++.+. .+...++..|-+.+.-|- ...=||-.+|+||++-.. ..-+|-++.| +-.++.. +.
T Consensus 259 ~~~~~v~li~pl~~~~f~~L~~~a~~iltDSG-------giqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~-~~- 328 (383)
T COG0381 259 KNVERVKLIDPLGYLDFHNLMKNAFLILTDSG-------GIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGT-DE- 328 (383)
T ss_pred CCCCcEEEeCCcchHHHHHHHHhceEEEecCC-------chhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCc-cH-
Confidence 444678888765 578889999977776553 356799999999999754 5667777754 3344433 33
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+.+.+++..++++++.+++|+... .-|.--+..+++++++...
T Consensus 329 -~~i~~~~~~ll~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 329 -ENILDAATELLEDEEFYERMSNAK-----NPYGDGNASERIVEILLNY 371 (383)
T ss_pred -HHHHHHHHHHhhChHHHHHHhccc-----CCCcCcchHHHHHHHHHHH
Confidence 889999999999999999886533 3566666777777776653
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.046 Score=60.37 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=68.5
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHH-HHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCcHHH
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTI-EAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vil-EAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
++.+.... .++..+++.|+++|..|- .+. ||.++|+|||.- +.|.-.|.+..+.+-+ ++ .+. +.
T Consensus 240 ~v~~~~~l~~~~~l~ll~~a~~vvgdSs--------GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~--~~ 307 (346)
T PF02350_consen 240 NVRLIEPLGYEEYLSLLKNADLVVGDSS--------GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDP--EA 307 (346)
T ss_dssp TEEEE----HHHHHHHHHHESEEEESSH--------HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSH--HH
T ss_pred CEEEECCCCHHHHHHHHhcceEEEEcCc--------cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCH--HH
Confidence 88888765 789999999999997772 356 999999999998 5577777777765544 65 444 89
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 683 LAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 683 La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+.+++.+++.+++.+..+.. ...-|--.+.+++++++++
T Consensus 308 I~~ai~~~l~~~~~~~~~~~-----~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 308 IIQAIEKALSDKDFYRKLKN-----RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp HHHHHHHHHH-HHHHHHHHC-----S--TT-SS-HHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHhhcc-----CCCCCCCCcHHHHHHHhhC
Confidence 99999999988655555421 1234666777777777764
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.16 Score=59.86 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=55.5
Q ss_pred HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CCh------------------hhhhccC-ceEEEEC-C
Q 004760 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGT------------------KEIVEHN-VTGLLHP-P 675 (732)
Q Consensus 617 v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~------------------~EiVe~g-~~Gll~~-~ 675 (732)
-.+++++||+.+..| |.+++||+.+|+|.|+.-- +.+ +.++.+. .---+.. .
T Consensus 482 ~~~~m~aaD~aLaaS-------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ 554 (608)
T PRK01021 482 RYELMRECDCALAKC-------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGK 554 (608)
T ss_pred hHHHHHhcCeeeecC-------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCc
Confidence 369999999999877 7899999999999988532 222 2222211 0001111 2
Q ss_pred CCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 004760 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKV 708 (732)
Q Consensus 676 ~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v 708 (732)
+|.+++.+++.+ +++.|++.++++.+...+.-
T Consensus 555 ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr 586 (608)
T PRK01021 555 KDFQPEEVAAAL-DILKTSQSKEKQKDACRDLY 586 (608)
T ss_pred ccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH
Confidence 345569999996 88899888877765554443
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.038 Score=64.18 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=71.6
Q ss_pred CCCCcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCC
Q 004760 603 NLSKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPG 676 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~ 676 (732)
+++++|.+.++... ..++ ..+++|| .-|...++.||+.+|+|+|+-...+ ....+++...|...+..
T Consensus 343 ~~p~Nv~i~~w~Pq-~~lL~hp~v~~fI------tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~ 415 (507)
T PHA03392 343 NLPANVLTQKWFPQ-RAVLKHKNVKAFV------TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTV 415 (507)
T ss_pred cCCCceEEecCCCH-HHHhcCCCCCEEE------ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccC
Confidence 45678888887643 4677 4588888 4445678999999999999976633 44445555678888877
Q ss_pred CCcHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRK 706 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~~~r~~m~~~~r~ 706 (732)
+.+.+.+.+++.++++||+.++...+-+..
T Consensus 416 ~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 416 TVSAAQLVLAIVDVIENPKYRKNLKELRHL 445 (507)
T ss_pred CcCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 777799999999999998876665444433
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.56 Score=50.63 Aligned_cols=90 Identities=20% Similarity=0.242 Sum_probs=60.5
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEE----EcCCCChhhhhccCceEEEECCC--CC
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVL----GTDAGGTKEIVEHNVTGLLHPPG--HP 678 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI----~td~gG~~EiVe~g~~Gll~~~~--d~ 678 (732)
.+++.+.-.+++++++|..||+.+.. -|.++.||...|+|.+ +.+.-....-.+. -|+....+ ..
T Consensus 209 ~~~i~~~~~~~dma~LMke~d~aI~A-------aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~ 279 (318)
T COG3980 209 YPNINLYIDTNDMAELMKEADLAISA-------AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLK 279 (318)
T ss_pred CCCeeeEecchhHHHHHHhcchheec-------cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCc
Confidence 36777877889999999999998754 3568999999999933 3444433333332 22222111 11
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEG 704 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~ 704 (732)
.+.....+.++..|+..|+.+....
T Consensus 280 -~~~~~~~~~~i~~d~~~rk~l~~~~ 304 (318)
T COG3980 280 -DLAKDYEILQIQKDYARRKNLSFGS 304 (318)
T ss_pred -hHHHHHHHHHhhhCHHHhhhhhhcc
Confidence 1678888889999998887765543
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.26 Score=54.23 Aligned_cols=111 Identities=14% Similarity=0.289 Sum_probs=62.8
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc--CC-------CChhhhhccCceEEEE
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT--DA-------GGTKEIVEHNVTGLLH 673 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t--d~-------gG~~EiVe~g~~Gll~ 673 (732)
....+|.+.....++.+++..||++|.= ++-++.|++.+++|||-. |. |...+ .++...|.++
T Consensus 249 ~~~~~i~~~~~~~~~~~ll~~aDiLITD-------ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~ 320 (369)
T PF04464_consen 249 EDNSNIIFVSDNEDIYDLLAAADILITD-------YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIV 320 (369)
T ss_dssp T-TTTEEE-TT-S-HHHHHHT-SEEEES-------S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EE
T ss_pred ccCCcEEECCCCCCHHHHHHhcCEEEEe-------chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCcee
Confidence 3446788887777999999999999942 445899999999999964 33 22222 2223345555
Q ss_pred CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 674 ~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
. +. ++|.++|..+++++...++-.+..++..-. |.-.+.++++.+.+.
T Consensus 321 ~--~~--~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 321 Y--NF--EELIEAIENIIENPDEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp S--SH--HHHHHHHTTHHHHHHHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred C--CH--HHHHHHHHhhhhCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 3 23 889999999887765543333333333322 444566777766553
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.058 Score=61.62 Aligned_cols=91 Identities=25% Similarity=0.273 Sum_probs=60.0
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCCcH
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHPGA 680 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~~~ 680 (732)
++++....+..+. ++++...+-++-++ |.-+.+.||+.+|+|+|+-..-| ....+++...|...+..+.+.
T Consensus 322 ~~n~~~~~W~PQ~-~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~ 396 (500)
T PF00201_consen 322 PKNVLIVKWLPQN-DLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTE 396 (500)
T ss_dssp HTTEEEESS--HH-HHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SH
T ss_pred cceEEEeccccch-hhhhcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcH
Confidence 3566666665443 67776665544454 46679999999999999976632 444455555788888777788
Q ss_pred HHHHHHHHHHhcCHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m 700 (732)
+.+.++|.++++|++.++..
T Consensus 397 ~~l~~ai~~vl~~~~y~~~a 416 (500)
T PF00201_consen 397 EELRAAIREVLENPSYKENA 416 (500)
T ss_dssp HHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHH
Confidence 99999999999998755443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.12 Score=62.83 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=63.1
Q ss_pred CCCC--cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCC
Q 004760 603 NLSK--AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPG 676 (732)
Q Consensus 603 ~l~~--~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~ 676 (732)
.+.+ +|.|+... +-...++.+||+-...|+.-.|+.|..-+=||.-|.+.++|--|...|+.++ +.||+++...
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~ 696 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNT 696 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCC
Confidence 4444 78888743 5567899999999998876699999999999999999999999999999986 7899999654
Q ss_pred C
Q 004760 677 H 677 (732)
Q Consensus 677 d 677 (732)
.
T Consensus 697 ~ 697 (815)
T PRK14986 697 A 697 (815)
T ss_pred H
Confidence 3
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.24 Score=50.38 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=76.7
Q ss_pred CeEEEEeCC---CCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch------------hh
Q 004760 243 RKFILIFHE---LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS------------FK 307 (732)
Q Consensus 243 ~kIllI~h~---ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~------------~~ 307 (732)
+||.+|-+- -..||-|..+.+|+..|.++|++|+|.|.....+. ...+-.|++++..+.... +.
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~-~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~ 80 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPY-KEFEYNGVRLVYIPAPKNGSAESIIYDFLSLL 80 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCC-CCcccCCeEEEEeCCCCCCchHHHHHHHHHHH
Confidence 567777665 35799999999999999999999999996554432 344557888776654432 11
Q ss_pred h--------hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEe--ech-hH-------hHHHhh-hhhccccEEEEe
Q 004760 308 T--------SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIM--ENR-RE-------YFDRAK-LVLDRVKLLVFL 368 (732)
Q Consensus 308 ~--------~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~--e~r-~~-------~~~~~~-~~l~r~~~li~v 368 (732)
. ..+.|+|+....-..+++..++..+...+.+++-.+. |.+ .. |+..+. ......+.+|+-
T Consensus 81 ~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlEWkR~KW~~~~k~~lk~~E~~avk~ad~lIaD 160 (185)
T PF09314_consen 81 HALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLEWKRAKWGRPAKKYLKFSEKLAVKYADRLIAD 160 (185)
T ss_pred HHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcchhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEc
Confidence 1 1356788765443234444444443332222332221 222 22 222111 112237889999
Q ss_pred cHHhHHH
Q 004760 369 SESQTKQ 375 (732)
Q Consensus 369 S~~~~~~ 375 (732)
|+...++
T Consensus 161 s~~I~~y 167 (185)
T PF09314_consen 161 SKGIQDY 167 (185)
T ss_pred CHHHHHH
Confidence 9887554
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.2 Score=60.78 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=63.2
Q ss_pred CCCC--cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCC
Q 004760 603 NLSK--AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPG 676 (732)
Q Consensus 603 ~l~~--~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~ 676 (732)
.+.+ +|.|+... +-...++.+||+-...|..-.|+.|..-+=+|.-|.+.|+|--|...|+.++ +.|++++...
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~ 683 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLT 683 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCC
Confidence 4445 68888743 5667899999999998876699999999999999999999999999999986 6899998654
Q ss_pred C
Q 004760 677 H 677 (732)
Q Consensus 677 d 677 (732)
.
T Consensus 684 ~ 684 (797)
T cd04300 684 A 684 (797)
T ss_pred H
Confidence 3
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.68 Score=55.70 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=54.6
Q ss_pred CCCCC--cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECC
Q 004760 602 SNLSK--AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPP 675 (732)
Q Consensus 602 l~l~~--~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~ 675 (732)
..+.+ +|.|+... +-...++.+|||-...|+.-.|+.|..-+=||.-|.+.++|-.|...|+.+. ..+.+++-.
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~ 596 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGL 596 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCC
Confidence 34444 68888743 5566889999999998876699999999999999999999999999999864 357888854
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.036 Score=61.38 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=93.8
Q ss_pred CcEEEccch---hhHHHHHHHcCEEEEccC-CCCCC---CcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCC
Q 004760 606 KAMLWTPAT---TRVASLYSAADVYVINSQ-GLGET---FGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 606 ~~V~f~G~~---~dv~~lysaADv~V~pS~-~~~Eg---fg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~ 678 (732)
+++...|+. ..++.+++.-|+++.-++ .+.++ +.+-+.|+|+||.|.++..-.++.-++..|..-+++. |.
T Consensus 237 ~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~ 314 (373)
T COG4641 237 PNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DS 314 (373)
T ss_pred chhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CH
Confidence 344455532 578888888888765332 22333 3789999999999999998899888888876655553 33
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
.++.+.+..++..++.++++++.|.+++...|+.++-..++++.+..
T Consensus 315 --kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 315 --KDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred --HHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999888887765
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.13 Score=62.18 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=61.1
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCCC
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPGH 677 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~d 677 (732)
+|.|+... +-...++.+||+....|..-.|+.|..-+=+|.-|.+.|+|--|...|+.++ +.||+++....
T Consensus 609 kVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~ 683 (798)
T PRK14985 609 KVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTV 683 (798)
T ss_pred eEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCH
Confidence 78888743 5667899999999998876699999999999999999999999999999885 68999996543
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.15 Score=61.66 Aligned_cols=75 Identities=20% Similarity=0.178 Sum_probs=63.1
Q ss_pred CCCC--cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCC
Q 004760 603 NLSK--AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPG 676 (732)
Q Consensus 603 ~l~~--~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~ 676 (732)
.+.+ +|.|+... +-...++.+||+-...|..-.|+.|..-+=+|.-|.+.|+|--|...|+.++ +.|++++...
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~ 680 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLT 680 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCC
Confidence 3444 78888743 5677899999999998876699999999999999999999999999999987 6899998654
Q ss_pred C
Q 004760 677 H 677 (732)
Q Consensus 677 d 677 (732)
.
T Consensus 681 ~ 681 (794)
T TIGR02093 681 V 681 (794)
T ss_pred H
Confidence 3
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.056 Score=58.43 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=58.9
Q ss_pred CCCcEEEccch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh------hhccCceEEEECCC
Q 004760 604 LSKAMLWTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE------IVEHNVTGLLHPPG 676 (732)
Q Consensus 604 l~~~V~f~G~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E------iVe~g~~Gll~~~~ 676 (732)
+.+++.+.++. +++..+|..||++|..+ -..++.||+++|+|+|.....+..| .+++...|...+..
T Consensus 227 ~~~~v~~~~~~~~~~~~~l~~ad~vI~~~------G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~ 300 (321)
T TIGR00661 227 YNENVEIRRITTDNFKELIKNAELVITHG------GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYK 300 (321)
T ss_pred cCCCEEEEECChHHHHHHHHhCCEEEECC------ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChh
Confidence 34678888877 58999999999999766 2347999999999999988765333 35555677777655
Q ss_pred CCcHHHHHHHHHHHhcCH
Q 004760 677 HPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~ 694 (732)
+. ++.+++...+.|+
T Consensus 301 ~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 301 EL---RLLEAILDIRNMK 315 (321)
T ss_pred hH---HHHHHHHhccccc
Confidence 53 4555555555443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.34 Score=58.39 Aligned_cols=75 Identities=25% Similarity=0.246 Sum_probs=63.3
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhc--cCceEEEECCCC
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVE--HNVTGLLHPPGH 677 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe--~g~~Gll~~~~d 677 (732)
+...+|.|++.. +-...++.+|||-...|..-.|+.|..-+=||.-|.+.|+|-.|...|+.+ .+.||+++....
T Consensus 554 n~~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 554 NNKLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred cccceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 444578888743 456678999999998877569999999999999999999999999999997 779999997654
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.39 Score=55.47 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=73.7
Q ss_pred EEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccCceEEEECCC----CCc
Q 004760 608 MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHNVTGLLHPPG----HPG 679 (732)
Q Consensus 608 V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g~~Gll~~~~----d~~ 679 (732)
+++.++..+. .+++...+..+-++ +--++++||+++|+|+|+... ......++....|+.+... ..+
T Consensus 341 ~vv~~W~PQ~-~IL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 341 MIHVGWVPQV-KILSHESVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred eEEeCcCCHH-HHhcCcccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence 4444544333 47777776444443 455789999999999999754 3344455555678777532 245
Q ss_pred HHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 680 AQVLAQNLRYLLKNPS--VRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~--~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
.+++++++++++.+++ ..++-.+.-++.+.++=...++++.+++.+++.
T Consensus 416 ~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 416 SDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 6999999999998752 222223334444555566677777777776654
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.61 E-value=1.6 Score=52.94 Aligned_cols=103 Identities=15% Similarity=0.083 Sum_probs=78.4
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcC----CCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG----VPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYL 690 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~G----lPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~L 690 (732)
.++-++|..+|+.+..+- .+|+.++.+|+.+|. .+.|.+..-|..+..+++ ..++.+-+. +.++..|...
T Consensus 364 ~~l~a~~~Vaev~~v~s~--rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnpw~~--~~~~~~i~~a 437 (732)
T KOG1050|consen 364 LELLALYKVAEVCPVTSW--RDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNPWDG--DEFAILISKA 437 (732)
T ss_pred HHHhhhHHhhhheeeccc--ccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECCcch--HHHHHHHHHH
Confidence 689999999999999996 999999999999983 778888888888888753 456677766 8999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 691 LKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 691 L~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
++.++...+++....-......+...++..+..
T Consensus 438 l~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~ 470 (732)
T KOG1050|consen 438 LTMSDEERELREPKHYKYVSTHDVVYWAKSFLQ 470 (732)
T ss_pred hhcCHHHHhhcchhhhhhhcchhHHHHHHHHHH
Confidence 997776666655444333334555555555555
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=93.21 E-value=1.8 Score=46.71 Aligned_cols=193 Identities=11% Similarity=0.081 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHHHHCCCEEEEEEeCCCCC---ChhHHHhCCcEEEEcCCCc-hhhhhcCccEEEeCCchhhHHHHHHH-
Q 004760 256 GAPLSMMELATELLSCGATVSAVVLSKRGG---LMPELARRKIKVLEDRGEP-SFKTSMKADLVIAGSAVCATWIDQYI- 330 (732)
Q Consensus 256 GA~~~~~eLA~~L~~~G~~V~vv~l~~~g~---l~~el~~~gI~v~~~~~~~-~~~~~~k~DlVia~Sav~~~~i~~~i- 330 (732)
|+.+...++-....+.|++++++......- -.++.....|+++...... .++.-..+|+++.||.-+...-.+++
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~e~de~v~~vN~yDI~m~nSvPa~~vqE~~iN 81 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAKEYDETVKKVNDYDIVMFNSVPATKVQEAIIN 81 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTTHHHHHHHHHTSSSEEEEEE--BTTS-HHHHH
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehhhHHHHHHHHHHhhccCEEEEecccCchHHHHHHH
Confidence 778888888899999999999998544321 1122333344444333222 24556699999999866555544433
Q ss_pred --HhhcCCCccEEE---EEeechhHhHHHh---hhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCcc
Q 004760 331 --TRFPAGGSQVVW---WIMENRREYFDRA---KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDEL 402 (732)
Q Consensus 331 --~~~~~~~~~ivw---~i~e~r~~~~~~~---~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~ 402 (732)
..+..+...-+| ..|+....-.++- ...+++.+.+...+... |-.-. +..-.-|.-+++...-.
T Consensus 82 nY~kii~~Ik~~ik~V~~~Hdh~~lsI~rn~~le~~m~~~DvIfshs~~g---~f~kv----~m~~l~Ps~~~l~~~i~- 153 (355)
T PF11440_consen 82 NYEKIIKKIKPSIKVVGFMHDHNKLSIDRNPYLEGTMNEMDVIFSHSDNG---WFSKV----LMKELLPSKVSLFDRIK- 153 (355)
T ss_dssp HHHHHHHCS-TTSEEEEEE---SHHHHTTBSSHHHHHHH-SEEEES-TTS---HHHHT----HHHHHS-SS--SSS----
T ss_pred HHHHHHHhccccceeEEEeeccceeeccccccHHHHHHhhcEEEeccccc---hHHHH----HHHhhccccCchhhhhh-
Confidence 344455532334 3333222222221 12344577777766554 21111 11011133333332211
Q ss_pred ceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEE---EEEecCCCCCCHHHHHHHHHHhHH
Q 004760 403 AFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLV---LSLSSINPGKGQLLLVESAQLMIE 470 (732)
Q Consensus 403 ~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~li---l~vGri~~~KG~d~LLeA~~~l~~ 470 (732)
.+..++| |+|...- ++.|..+-.+...+.. +++||..-.||+..+++......+
T Consensus 154 -~~p~v~n------fqpp~~i-------~~~Rstywkd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK 210 (355)
T PF11440_consen 154 -KFPMVFN------FQPPMDI-------NKYRSTYWKDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILK 210 (355)
T ss_dssp -----EEE----------B-H-------HHHHHHH---GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTT
T ss_pred -hcceeee------cCCcccH-------HHHHHHHhhhhHhhhcccceeeeeeeeecCcHHHhhhHHHhcC
Confidence 1222222 2221111 3455555544444444 799999999999999998887543
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.62 Score=53.49 Aligned_cols=84 Identities=14% Similarity=0.083 Sum_probs=55.3
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccC-ceEEEECCCCCcH
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHN-VTGLLHPPGHPGA 680 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g-~~Gll~~~~d~~~ 680 (732)
++....++..+. .+++..++..+-++ +--++++||+++|+|+|+... ......+.+. ..|+-+. ++.+.
T Consensus 324 ~~g~v~~w~PQ~-~iL~h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~ 397 (451)
T PLN02410 324 GRGYIVKWAPQK-EVLSHPAVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDR 397 (451)
T ss_pred CCeEEEccCCHH-HHhCCCccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccH
Confidence 455555655333 47777666333332 344689999999999999654 3344444433 5777664 45566
Q ss_pred HHHHHHHHHHhcCHH
Q 004760 681 QVLAQNLRYLLKNPS 695 (732)
Q Consensus 681 e~La~aL~~LL~n~~ 695 (732)
+++++++++++.+++
T Consensus 398 ~~v~~av~~lm~~~~ 412 (451)
T PLN02410 398 GAVERAVKRLMVEEE 412 (451)
T ss_pred HHHHHHHHHHHcCCc
Confidence 999999999998754
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=92.32 E-value=20 Score=39.30 Aligned_cols=49 Identities=24% Similarity=0.325 Sum_probs=37.2
Q ss_pred CcE-EEccch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC
Q 004760 606 KAM-LWTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659 (732)
Q Consensus 606 ~~V-~f~G~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG 659 (732)
..+ .|-+.. +-+..+|..||.++++.. .-.-+.||.+.|+||.+-...+
T Consensus 209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~D-----SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 209 PGVYIWDGTGENPYLGFLAAADAIVVTED-----SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred CceEEecCCCCCcHHHHHHhCCEEEEcCc-----cHHHHHHHHHcCCCEEEecCCC
Confidence 455 554433 448899999999998764 2335899999999999988866
|
The function of this family is unknown. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.02 E-value=1.4 Score=50.41 Aligned_cols=115 Identities=5% Similarity=0.012 Sum_probs=69.3
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhcc-CceEEEECCCC---
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEH-NVTGLLHPPGH--- 677 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~-g~~Gll~~~~d--- 677 (732)
+++.+.++..+. ++++...+..+-++ +--++++||+++|+|+|+-.. .....++.+ -..|+.+...+
T Consensus 311 ~g~~v~~W~PQ~-~iL~H~~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~ 385 (442)
T PLN02208 311 RGVVWGGWVQQP-LILDHPSIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGW 385 (442)
T ss_pred CCcEeeccCCHH-HHhcCCccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCc
Confidence 345555554333 47777876555454 455789999999999999755 334444333 45677775433
Q ss_pred CcHHHHHHHHHHHhcCH-HHHHHHHHHHHH---HHHHhcCHHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNP-SVRERMAMEGRK---KVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~-~~r~~m~~~~r~---~v~~~ys~~~~~~~~~ev~ 725 (732)
.+.++++++++++++++ +..+++.+++++ .+.+.-+-....+++++-+
T Consensus 386 ~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l 437 (442)
T PLN02208 386 FSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEEL 437 (442)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 46699999999999875 334444444433 2323334444444444444
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=91.87 E-value=1.1 Score=51.92 Aligned_cols=114 Identities=18% Similarity=0.124 Sum_probs=64.5
Q ss_pred CcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC----Chh-hhhccCceEEEECC---
Q 004760 606 KAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG----GTK-EIVEHNVTGLLHPP--- 675 (732)
Q Consensus 606 ~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g----G~~-EiVe~g~~Gll~~~--- 675 (732)
+++.+.++..+ ..++ .++++|| + -+--++++||+.+|+|+|+.... ... .+++.-..|+.+..
T Consensus 342 ~~g~v~~W~PQ-~~iL~H~~v~~Fv--t----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~ 414 (481)
T PLN02554 342 DIGKVIGWAPQ-VAVLAKPAIGGFV--T----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWR 414 (481)
T ss_pred cCceEEeeCCH-HHHhCCcccCccc--c----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccc
Confidence 34444454432 2566 4444455 3 23456899999999999997553 333 34554456766531
Q ss_pred --------CCCcHHHHHHHHHHHhc-CHHHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 676 --------GHPGAQVLAQNLRYLLK-NPSVRER---MAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 676 --------~d~~~e~La~aL~~LL~-n~~~r~~---m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+..+.+++++++++++. +++.+++ +++.+++.+.+-=+-....+++++-+.
T Consensus 415 ~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~ 477 (481)
T PLN02554 415 GDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVT 477 (481)
T ss_pred ccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Confidence 23456999999999996 5544433 333333333333333444455554443
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=91.65 E-value=1.2 Score=51.25 Aligned_cols=85 Identities=9% Similarity=0.145 Sum_probs=58.1
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccC-ceEEEECCCC---
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHN-VTGLLHPPGH--- 677 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g-~~Gll~~~~d--- 677 (732)
+++.+.++..+. .+++.+.+..+-++ +-.++++||+++|+|+|+-.. .-....+.+. ..|+-+..++
T Consensus 317 ~~~~i~~W~PQ~-~iL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~ 391 (449)
T PLN02173 317 DKSLVLKWSPQL-QVLSNKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG 391 (449)
T ss_pred CceEEeCCCCHH-HHhCCCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCC
Confidence 567777766444 58888885555454 456799999999999999755 3345555542 4666653221
Q ss_pred -CcHHHHHHHHHHHhcCHH
Q 004760 678 -PGAQVLAQNLRYLLKNPS 695 (732)
Q Consensus 678 -~~~e~La~aL~~LL~n~~ 695 (732)
.+.+++++++++++.+++
T Consensus 392 ~~~~e~v~~av~~vm~~~~ 410 (449)
T PLN02173 392 IAKREEIEFSIKEVMEGEK 410 (449)
T ss_pred cccHHHHHHHHHHHhcCCh
Confidence 245999999999998743
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=91.62 E-value=1.5 Score=50.61 Aligned_cols=85 Identities=12% Similarity=0.134 Sum_probs=54.5
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhcc-CceEEEE------
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEH-NVTGLLH------ 673 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~-g~~Gll~------ 673 (732)
+.+++..++..+ ..++..+++-.+-++ +--++++||+++|+|+|+....+ ....+.+ ...|+-+
T Consensus 344 ~~g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 418 (482)
T PLN03007 344 GKGLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLV 418 (482)
T ss_pred cCCEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccc
Confidence 346676666544 368888887444343 34568999999999999976532 3332221 1234332
Q ss_pred --CCCCCcHHHHHHHHHHHhcCH
Q 004760 674 --PPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 674 --~~~d~~~e~La~aL~~LL~n~ 694 (732)
+.+..+.+++++++++++.++
T Consensus 419 ~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 419 KVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred ccccCcccHHHHHHHHHHHhcCc
Confidence 223345699999999999876
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.83 Score=52.52 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=60.3
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhc-cCceEEEECCC---C
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVE-HNVTGLLHPPG---H 677 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe-~g~~Gll~~~~---d 677 (732)
.++.+.++..+. .+++.+++..+-++ +--++++||+++|+|+|+... ......+. .-..|+..+.+ .
T Consensus 334 ~g~~v~~W~PQ~-~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 334 KGMVVKSWAPQV-PVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred CcEEEEeeCCHH-HHhCCCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 456665655333 58899998444443 455789999999999999654 44555554 33578777532 3
Q ss_pred CcHHHHHHHHHHHhcCHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSVRE 698 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~ 698 (732)
.+.+++++++++++.+++.++
T Consensus 409 ~~~e~l~~av~~vm~~~~~r~ 429 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECPVRE 429 (451)
T ss_pred cCHHHHHHHHHHHhcCHHHHH
Confidence 456999999999998865443
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=91.21 E-value=1.6 Score=50.16 Aligned_cols=93 Identities=15% Similarity=0.056 Sum_probs=56.9
Q ss_pred cEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC----Chhhhhcc-CceEEEECC-----C
Q 004760 607 AMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG----GTKEIVEH-NVTGLLHPP-----G 676 (732)
Q Consensus 607 ~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g----G~~EiVe~-g~~Gll~~~-----~ 676 (732)
++.+.++.. -..+++.+++..+-++ +--++++||+++|+|+|+-... .....+.+ -..|+-+.. +
T Consensus 324 ~~~v~~w~p-Q~~iL~h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 324 MGLVVPWCD-QLKVLCHSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred CEEEeccCC-HHHHhccCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 455555442 2356667776333333 4556899999999999997553 34444544 245665531 2
Q ss_pred CCcHHHHHHHHHHHhcCH-HHHHHHHHHH
Q 004760 677 HPGAQVLAQNLRYLLKNP-SVRERMAMEG 704 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~-~~r~~m~~~~ 704 (732)
..+.+++++++++++.++ +.-+.|.+++
T Consensus 399 ~~~~~~l~~av~~vl~~~~~~~~~~r~~a 427 (459)
T PLN02448 399 LVGREEIAELVKRFMDLESEEGKEMRRRA 427 (459)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 235599999999999864 3333444333
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.00 E-value=26 Score=37.94 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=42.1
Q ss_pred HHHhcCCCCCcEEEccch---hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh
Q 004760 597 FLSQHSNLSKAMLWTPAT---TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT 660 (732)
Q Consensus 597 ~l~~~l~l~~~V~f~G~~---~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~ 660 (732)
.++.+++-..-+.|-+.- .-+..++++||.++.+.. .=.-..||.+.|+||.+....+.
T Consensus 215 ~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaD-----SinM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 215 ILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTAD-----SINMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred HHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecc-----hhhhhHHHhccCCCeEEEecCCc
Confidence 444555666667777652 457899999999998765 22346899999999988655443
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=90.70 E-value=1.4 Score=50.43 Aligned_cols=88 Identities=14% Similarity=0.037 Sum_probs=58.4
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhcc-CceEEEECCCCCcH
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEH-NVTGLLHPPGHPGA 680 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~-g~~Gll~~~~d~~~ 680 (732)
+++.+.++.. -..+++.+++..+-++ +.-++++||+++|+|+|+... ......+.+ -..|+-+. +.+.
T Consensus 328 ~~~~v~~w~P-Q~~iL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~ 400 (448)
T PLN02562 328 KQGKVVSWAP-QLEVLKHQAVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQ 400 (448)
T ss_pred cCEEEEecCC-HHHHhCCCccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCH
Confidence 4565566542 2367877776444453 345689999999999998754 334455543 24565554 3345
Q ss_pred HHHHHHHHHHhcCHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m 700 (732)
+++++++++++.+++.+++.
T Consensus 401 ~~l~~~v~~~l~~~~~r~~a 420 (448)
T PLN02562 401 KEVEEGLRKVMEDSGMGERL 420 (448)
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 89999999999987655543
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=90.09 E-value=1.6 Score=50.32 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=65.7
Q ss_pred EccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhcc-CceEEEECC----CCCcH
Q 004760 610 WTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEH-NVTGLLHPP----GHPGA 680 (732)
Q Consensus 610 f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~-g~~Gll~~~----~d~~~ 680 (732)
+.++..+. .+++.+.+..+-++ +--++++||+++|+|+|+-.. .-....+.+ -..|+.+.. +..+.
T Consensus 328 v~~w~PQ~-~iL~h~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 328 VLEWSPQE-KILSHMAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred EEecCCHH-HHhcCcCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 34544332 58888874433342 233589999999999999655 334445544 457776642 23456
Q ss_pred HHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPS------VRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 681 e~La~aL~~LL~n~~------~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
+++++++++++.+++ ..++|++.+++.+.+-=|-....+.+++
T Consensus 403 ~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~ 451 (456)
T PLN02210 403 EEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFIS 451 (456)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999999999998754 2234455555555444444444444443
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=89.63 E-value=2 Score=49.45 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=54.7
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccC-ceEEEECC---C
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHN-VTGLLHPP---G 676 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g-~~Gll~~~---~ 676 (732)
.++..+.++..+. ++++.+.+..+-++ +-.++++||+.+|+|+|+-.. ......+.+. ..|+-... +
T Consensus 326 ~~~g~v~~W~PQ~-~iL~h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 326 EEVGMIVSWCSQI-EVLRHRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred cCCeEEEeeCCHH-HHhCCcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence 3455555655433 57888886555454 455689999999999999754 3344444431 24444421 2
Q ss_pred CCcHHHHHHHHHHHhcCHH
Q 004760 677 HPGAQVLAQNLRYLLKNPS 695 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~~ 695 (732)
..+.+++++++++++.++.
T Consensus 401 ~~~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 401 LVERGEIRRCLEAVMEEKS 419 (455)
T ss_pred cCcHHHHHHHHHHHHhhhH
Confidence 2355999999999997654
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=89.44 E-value=2.8 Score=48.60 Aligned_cols=92 Identities=13% Similarity=0.027 Sum_probs=56.4
Q ss_pred CcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhhccC-ceEEEEC----
Q 004760 606 KAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIVEHN-VTGLLHP---- 674 (732)
Q Consensus 606 ~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiVe~g-~~Gll~~---- 674 (732)
+++.+.++..+ ..++ .++.+|| + -+--++++||+++|+|+|+... ......+.+. ..|+...
T Consensus 337 ~~g~v~~W~PQ-~~iL~H~~v~~Fv--t----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~ 409 (480)
T PLN02555 337 DKGKIVQWCPQ-EKVLAHPSVACFV--T----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEA 409 (480)
T ss_pred CceEEEecCCH-HHHhCCCccCeEE--e----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcc
Confidence 45555555433 2466 4455566 2 2445689999999999999755 3344444433 5776662
Q ss_pred -CCCCcHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 675 -PGHPGAQVLAQNLRYLLKNPSVRERMAMEGR 705 (732)
Q Consensus 675 -~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r 705 (732)
.+..+.+++++++++++.+++ -++|.++++
T Consensus 410 ~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~ 440 (480)
T PLN02555 410 ENKLITREEVAECLLEATVGEK-AAELKQNAL 440 (480)
T ss_pred ccCcCcHHHHHHHHHHHhcCch-HHHHHHHHH
Confidence 233455899999999997643 234444433
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=89.29 E-value=3.3 Score=47.81 Aligned_cols=117 Identities=9% Similarity=0.070 Sum_probs=68.9
Q ss_pred EEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhc-cCceEEEECC---CCCc
Q 004760 608 MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVE-HNVTGLLHPP---GHPG 679 (732)
Q Consensus 608 V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe-~g~~Gll~~~---~d~~ 679 (732)
+.+.++..+. ++++...+..+-++ +--++++||+++|+|+|+-...+ ....+. .-..|+.... ++.+
T Consensus 319 ~v~~~W~PQ~-~vL~h~~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 319 VVWGGWVQQP-LILSHPSVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred cEEeCCCCHH-HHhcCcccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 3444443222 56777555333333 45678999999999999976533 444553 3356665432 2346
Q ss_pred HHHHHHHHHHHhcCH-HHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 680 AQVLAQNLRYLLKNP-SVRERMAMEG---RKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 680 ~e~La~aL~~LL~n~-~~r~~m~~~~---r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.+++.+++++++.++ +..+++.+++ ++.+.+.=+-....+++++-+.+..
T Consensus 394 ~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 394 KESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Confidence 699999999999875 3334444433 3344444444555555555555443
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=89.02 E-value=2.2 Score=49.08 Aligned_cols=92 Identities=9% Similarity=0.086 Sum_probs=59.0
Q ss_pred EEEccchhhHHHHHHHcCE--EEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhh-ccCceEEEECCC---C
Q 004760 608 MLWTPATTRVASLYSAADV--YVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIV-EHNVTGLLHPPG---H 677 (732)
Q Consensus 608 V~f~G~~~dv~~lysaADv--~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiV-e~g~~Gll~~~~---d 677 (732)
+++.++..+. .+++.+.+ || + -+--++++||+++|+|+|+-.. .-....+ +.-..|+.+..+ .
T Consensus 314 ~vv~~w~PQ~-~vL~h~~v~~fv--t----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 314 IVWEGWVEQP-LILSHPSVGCFV--N----HCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eEEeccCCHH-HHhcCCccceEE--e----cCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 3444444332 57777744 65 3 2455789999999999999755 3344555 344677766432 2
Q ss_pred CcHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNP-SVRERMAMEGRK 706 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~-~~r~~m~~~~r~ 706 (732)
.+.+++++++++++.++ +..+++.+++++
T Consensus 387 ~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 387 FSKESLRDTVKSVMDKDSEIGNLVKRNHKK 416 (446)
T ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHH
Confidence 45699999999999865 344555555443
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=88.59 E-value=3.2 Score=48.21 Aligned_cols=83 Identities=8% Similarity=0.040 Sum_probs=56.4
Q ss_pred cEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhh-ccCceEEEECC--CCCc
Q 004760 607 AMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIV-EHNVTGLLHPP--GHPG 679 (732)
Q Consensus 607 ~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiV-e~g~~Gll~~~--~d~~ 679 (732)
.+++.++..+. .+++.+.+..+-++ +--++++||+.+|+|+|+-.. ......+ +.-..|+..+. +..+
T Consensus 339 g~vv~~W~PQ~-~iL~h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 413 (481)
T PLN02992 339 GFVVPSWAPQA-EILAHQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS 413 (481)
T ss_pred CEEEeecCCHH-HHhCCcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence 46666655333 57788777444343 455689999999999999765 3344455 34456776654 2356
Q ss_pred HHHHHHHHHHHhcCH
Q 004760 680 AQVLAQNLRYLLKNP 694 (732)
Q Consensus 680 ~e~La~aL~~LL~n~ 694 (732)
.+++++++.+++.++
T Consensus 414 ~~~l~~av~~vm~~~ 428 (481)
T PLN02992 414 RSKIEALVRKVMVEE 428 (481)
T ss_pred HHHHHHHHHHHhcCC
Confidence 699999999999764
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=88.00 E-value=5.4 Score=46.23 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=65.6
Q ss_pred CcEEEccchhhHHHHHHH--cCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhh-ccCceEEEECCC--
Q 004760 606 KAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIV-EHNVTGLLHPPG-- 676 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysa--ADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiV-e~g~~Gll~~~~-- 676 (732)
.++++.++..+ ..+++. +++|| + -+.-++++||+++|+|+|+-.. .-....+ +.-..|+....+
T Consensus 343 ~g~~v~~w~PQ-~~vL~h~~v~~fv--t----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~ 415 (477)
T PLN02863 343 RGLVIRGWAPQ-VAILSHRAVGAFL--T----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGAD 415 (477)
T ss_pred CCEEecCCCCH-HHHhcCCCcCeEE--e----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCC
Confidence 35666666543 357776 45566 3 2455689999999999999654 3344444 343677766321
Q ss_pred -CCcHHHHHHHHHHHh-cCHHHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 677 -HPGAQVLAQNLRYLL-KNPSVRE---RMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 677 -d~~~e~La~aL~~LL-~n~~~r~---~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
..+.++++++++.++ ++++.++ ++++.+++.+.+.=+-....+++++.+.
T Consensus 416 ~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 416 TVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred CCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 224489999999888 4444333 2233333333333344445555555443
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.34 E-value=5.1 Score=46.29 Aligned_cols=109 Identities=17% Similarity=0.060 Sum_probs=61.8
Q ss_pred EEccchhhHHHHHHHcC--EEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhh-hhccCceEEEECC------
Q 004760 609 LWTPATTRVASLYSAAD--VYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKE-IVEHNVTGLLHPP------ 675 (732)
Q Consensus 609 ~f~G~~~dv~~lysaAD--v~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~E-iVe~g~~Gll~~~------ 675 (732)
.+.++..+ ..+++... +|| ++ +--++++||+++|+|+|+-.. .-... +++.-..|+.+..
T Consensus 343 ~v~~w~PQ-~~iL~h~~vg~fv--tH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 343 LVCGWAPQ-VEILAHKAIGGFV--SH----CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred eeeccCCH-HHHhcCcccCeEE--ee----CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 34454422 25676644 455 32 334589999999999999754 22332 3444456776642
Q ss_pred -CCCcHHHHHHHHHHHhcCH-H---HHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 676 -GHPGAQVLAQNLRYLLKNP-S---VRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 676 -~d~~~e~La~aL~~LL~n~-~---~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
+..+.+++++++++++.++ . ..+++++.+++.+.+.=+-....+++++-
T Consensus 416 ~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~ 469 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDD 469 (475)
T ss_pred CCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 1235589999999999754 2 22334444444444443444444444443
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.65 E-value=6.9 Score=45.38 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=56.5
Q ss_pred EEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC----CChhhhh-ccCceEEEECCC-----C
Q 004760 608 MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA----GGTKEIV-EHNVTGLLHPPG-----H 677 (732)
Q Consensus 608 V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~----gG~~EiV-e~g~~Gll~~~~-----d 677 (732)
+.+.++..+ ..+++.+++..+-++ +--++++||+++|+|+|+-.. .-....+ +.-..|+..... .
T Consensus 341 ~~v~~w~PQ-~~iL~h~~vg~fvtH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~ 415 (480)
T PLN00164 341 LVWPTWAPQ-KEILAHAAVGGFVTH----CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNF 415 (480)
T ss_pred eEEeecCCH-HHHhcCcccCeEEee----cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCc
Confidence 444444322 267788776444443 344589999999999999654 3344444 444577766321 1
Q ss_pred CcHHHHHHHHHHHhcCHH-HHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPS-VRERMAMEG 704 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~-~r~~m~~~~ 704 (732)
.+.+++++++++++.+++ ..+.|.+++
T Consensus 416 ~~~e~l~~av~~vm~~~~~~~~~~r~~a 443 (480)
T PLN00164 416 VEAAELERAVRSLMGGGEEEGRKAREKA 443 (480)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 345999999999997653 233444433
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.72 E-value=5.4 Score=42.10 Aligned_cols=44 Identities=25% Similarity=0.320 Sum_probs=34.0
Q ss_pred CcEEEccchhhHHHHHHHcCEEEE-ccCCCCCCCcHHHHHHHHcCCCEEEcCC
Q 004760 606 KAMLWTPATTRVASLYSAADVYVI-NSQGLGETFGRVTIEAMAFGVPVLGTDA 657 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~-pS~~~~Egfg~vilEAMA~GlPVI~td~ 657 (732)
.++.+.....++.+++..||.++. +|. +-+||+.+|+||++...
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~VvtinSt--------vGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDAVVTINST--------VGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCEEEEECCH--------HHHHHHHcCCceEEecC
Confidence 345555555689999999997654 443 89999999999999654
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=82.19 E-value=12 Score=43.67 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=52.7
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhh-ccCceEEEECC-----
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIV-EHNVTGLLHPP----- 675 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiV-e~g~~Gll~~~----- 675 (732)
.++++.++..+ ..++..+++..+-++ +-.++++||+++|+|+|+-...+ ....+ +.-..|+-+..
T Consensus 344 ~g~~v~~w~pq-~~iL~h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~ 418 (491)
T PLN02534 344 RGLLIKGWAPQ-VLILSHPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR 418 (491)
T ss_pred CCeeccCCCCH-HHHhcCCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence 45666666544 458888887433343 46679999999999999976633 22222 33234443310
Q ss_pred -------C-CCcHHHHHHHHHHHhc
Q 004760 676 -------G-HPGAQVLAQNLRYLLK 692 (732)
Q Consensus 676 -------~-d~~~e~La~aL~~LL~ 692 (732)
+ ..+.+++++++++++.
T Consensus 419 ~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 419 WGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccCccCHHHHHHHHHHHhc
Confidence 0 1345899999999996
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=81.94 E-value=11 Score=40.93 Aligned_cols=41 Identities=20% Similarity=0.187 Sum_probs=30.8
Q ss_pred Eccc--hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC
Q 004760 610 WTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA 657 (732)
Q Consensus 610 f~G~--~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~ 657 (732)
+.|. ..++..+++.||++|.+.. |. +-=|.|+|+|+|+--.
T Consensus 236 l~g~~sL~el~ali~~a~l~I~~DS------Gp-~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 236 LAGETSLDEAVDLIALAKAVVTNDS------GL-MHVAAALNRPLVALYG 278 (334)
T ss_pred CCCCCCHHHHHHHHHhCCEEEeeCC------HH-HHHHHHcCCCEEEEEC
Confidence 5564 3799999999999997764 22 3337899999998533
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=81.28 E-value=26 Score=40.17 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=57.7
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-Chhhhhcc-CceEEEECCCCCcHHHHHHHHHHHhc
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-GTKEIVEH-NVTGLLHPPGHPGAQVLAQNLRYLLK 692 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-G~~EiVe~-g~~Gll~~~~d~~~e~La~aL~~LL~ 692 (732)
.++..+++.||++|-.=. -.++=|+++|+|+|+-... -...++++ +...++++..+.+.+.|.+.+.++++
T Consensus 319 ~e~~~iIs~~dl~ig~Rl-------Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~ 391 (426)
T PRK10017 319 LEMGKILGACELTVGTRL-------HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLG 391 (426)
T ss_pred HHHHHHHhhCCEEEEecc-------hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHh
Confidence 578899999999885442 1477799999999997652 23333332 22335566666555899999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 004760 693 NPSVRERMAMEGRKK 707 (732)
Q Consensus 693 n~~~r~~m~~~~r~~ 707 (732)
|.+..++.-..+.+.
T Consensus 392 ~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 392 QLPALNARLAEAVSR 406 (426)
T ss_pred CHHHHHHHHHHHHHH
Confidence 877655443333333
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=80.93 E-value=51 Score=35.55 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=32.9
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA 657 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~ 657 (732)
.+.+.|.. .++..+++.||++|.+.. | .+-=|-|+|+|+|+--.
T Consensus 235 ~~~l~g~~sL~elaali~~a~l~I~nDS------G-p~HlA~A~g~p~valfG 280 (322)
T PRK10964 235 YVEVLPKLSLEQVARVLAGAKAVVSVDT------G-LSHLTAALDRPNITLYG 280 (322)
T ss_pred cceecCCCCHHHHHHHHHhCCEEEecCC------c-HHHHHHHhCCCEEEEEC
Confidence 35566643 799999999999997764 2 23448899999999543
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=80.01 E-value=2.9 Score=46.59 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=29.5
Q ss_pred hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC
Q 004760 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656 (732)
Q Consensus 616 dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td 656 (732)
+..++|++||+.+..| |.+++|++.+|+|.|..-
T Consensus 228 ~~~~~m~~aDlal~~S-------GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 DTHKALLEAEFAFICS-------GTATLEAALIGTPFVLAY 261 (347)
T ss_pred cHHHHHHhhhHHHhcC-------cHHHHHHHHhCCCEEEEE
Confidence 5678999999998776 778899999999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 732 | ||||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 7e-08 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 8e-08 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 3e-05 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 6e-05 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 2e-04 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 3e-04 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 3e-04 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 4e-04 |
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 5e-31
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 592 KEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP 651
+ L ++ ++ +L+ VA L + +D+ ++ S E+FG V +EAMA GVP
Sbjct: 253 FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLS--EKESFGLVLLEAMACGVP 310
Query: 652 VLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERM 711
+GT GG E+++H TG L G +A LLK+ + M R+ V
Sbjct: 311 CIGTRVGGIPEVIQHGDTGYLCEVGDTTG--VADQAIQLLKDEELHRNMGERARESVYEQ 368
Query: 712 YLKKHMYKKLSQVIYKCMKPK 732
+ + + + + Y ++
Sbjct: 369 FRSEKIVSQYETIYYDVLRDD 389
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-28
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
AS +ADVY G GE+FG V +EAMA G V+ +D + ++ G L P
Sbjct: 275 TKASAMRSADVYCAPHLG-GESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPV 333
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
+A L +L++ +R ++V R
Sbjct: 334 DDADG--MAAALIGILEDDQLRAGYVARASERVHR 366
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 3e-28
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 589 PYVKEILEFLSQHSNLSKAMLWTPATTR-VASLYSAADVYVINSQGLGETFGRVTIEAMA 647
Y ++ L + + ++ R V + A+DV + S + E FG EAM
Sbjct: 280 IYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS--IREGFGLTVTEAMW 337
Query: 648 FGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKK 707
G PV+G GG K + TG L A + + YLLK+P V + M + +++
Sbjct: 338 KGKPVIGRAVGGIKFQIVDGETGFLVRD----ANEAVEVVLYLLKHPEVSKEMGAKAKER 393
Query: 708 VERMYLKKHMYKKLSQVIYK 727
V + ++ ++ ++
Sbjct: 394 VRKNFIITKHMERYLDILNS 413
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 8e-27
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 574 LKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR--VASLYSAADVYVINS 631
L+++I S N P + +++ + K + + + ++Y AAD+ + S
Sbjct: 277 LRVIICGGPSGPNATP---DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPS 333
Query: 632 QGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL 691
E+FG V +EA A G PV+ GG V TGLL P A A L LL
Sbjct: 334 --FNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHA--WADALATLL 389
Query: 692 KNPSVRERMAMEGRKKVER 710
+ R RM + +
Sbjct: 390 DDDETRIRMGEDAVEHART 408
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 4e-25
Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 593 EILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPV 652
E L++ + + + V+ L +AAD+ + + E G V +EA+ G+PV
Sbjct: 240 RKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA--YQEAAGIVLLEAITAGLPV 297
Query: 653 LGTDAGGTKEIVEHNVTGLLHP-PGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERM 711
L T G + G + P L + LR L +R A R +
Sbjct: 298 LTTAVCGYAHYIADANCGTVIAEPFSQEQ--LNEVLRKALTQSPLRMAWAENARHYADT- 354
Query: 712 YLKKHMYKKLSQVIYKCM 729
+ +K + +I +
Sbjct: 355 QDLYSLPEKAADIITGGL 372
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 8e-25
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 616 RVASLYSAADVYVINSQGLG-----ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTG 670
+ + +AAD++ + ++ G E G V +EA A GVPV+ +GG E V TG
Sbjct: 265 DMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-ATG 323
Query: 671 LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMY 712
L+ L++ L LL +P R M GR VE +
Sbjct: 324 LVVEGSDVDK--LSELLIELLDDPIRRAAMGAAGRAHVEAEW 363
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 589 PYVKEILEFLSQHSNLSKAMLWTPATTR--VASLY----SAADVYVINSQGLGETFGRVT 642
+ +I+E + + + + P ++ +A Y S V+ + S E FG
Sbjct: 319 EILGKIIELIDNN-DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTS--FYEPFGLAP 375
Query: 643 IEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAM 702
+EAMA G+P + T GG EI++ G+L P P +A+ L ++
Sbjct: 376 VEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPED--IARGLLKAFESEETWSAYQE 433
Query: 703 EGRKKVERMY 712
+G+++VE Y
Sbjct: 434 KGKQRVEERY 443
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 2e-21
Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 30/146 (20%)
Query: 567 DGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADV 626
G ++ +K+L +G VK F++ + + +
Sbjct: 40 KGPDEKKIKLLAQKLG--------VKAEFGFVNS--------------NELLEILKTCTL 77
Query: 627 YVINSQGLGETFGRVTIEAMAFGVPVLGTDA--GGTKEIVEHNVTGLLHPPGHPGAQVLA 684
YV + E+ +EA++ G+ + ++ T++ L P + L+
Sbjct: 78 YVHAA--NVESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNNAKD--LS 131
Query: 685 QNLRYLLKNPSVRERMAMEGRKKVER 710
+ + L+N RERM E K
Sbjct: 132 AKIDWWLENKLERERMQNEYAKSALN 157
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 3e-21
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG 676
+ LYS + ++ E FG IEAMA G PV+ + GG KE V + TG L
Sbjct: 91 LIDLYSRCKGLLCTAKD--EDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA- 147
Query: 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER 710
+ ++ + KNP ++ + ++ +
Sbjct: 148 DVNE--IIDAMKKVSKNP---DKFKKDCFRRAKE 176
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 97.4 bits (242), Expect = 5e-21
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 574 LKILIGSVGSKSNKVPYVKEI--LEFLSQHSNLSKAMLWTPA---TTRVASLY----SAA 624
L ++ G +S E+ + L + L+ W + R LY
Sbjct: 606 LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK 665
Query: 625 DVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG--AQV 682
+V + L E FG +EAM G+P T GG EI+ H +G P H A
Sbjct: 666 GAFVQPA--LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADT 723
Query: 683 LAQNLRYLLKNPSVRERMAMEGRKKVERMY 712
LA ++PS + ++ G +++E Y
Sbjct: 724 LADFFTKCKEDPSHWDEISKGGLQRIEEKY 753
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 91.8 bits (227), Expect = 8e-20
Identities = 14/112 (12%), Positives = 37/112 (33%), Gaps = 7/112 (6%)
Query: 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPP 675
A L + + + + +E FG+ V+ K++ + +
Sbjct: 307 DYADLLKRSSIGISLM--ISPHPSYPPLEMAHFGLRVITNKYEN-KDLSNWHSNIVSLEQ 363
Query: 676 GHPGAQVLAQNLRYLLKNPSVRERMAMEGRK--KVERMYLKKHMYKKLSQVI 725
+P +A+ L L + + R+ E + + K++ + +
Sbjct: 364 LNPEN--IAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEIEEKL 413
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 86.4 bits (213), Expect = 4e-18
Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 18/129 (13%)
Query: 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPG 676
V +Y+A DV V S GE FG + E G P++ + GG + + + P
Sbjct: 267 VDMMYNACDVIVNCS--SGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSA 324
Query: 677 HPGAQV---------------LAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKL 721
L + + K+ R+ + V+ + +
Sbjct: 325 WISVDDRDGIGGIEGIIDVDDLVEAFTF-FKDEKNRKEYGKRVQDFVKTKPTWDDISSDI 383
Query: 722 SQVIYKCMK 730
++
Sbjct: 384 IDFFNSLLR 392
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-10
Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 17/105 (16%)
Query: 616 RVASLYSAADVYVINSQGLG--------ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN 667
R L ++A + SQ + E V EA G PV+GT G EIV
Sbjct: 224 RRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV 283
Query: 668 VTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMY 712
+ + + L + + R+ R++
Sbjct: 284 GEVVGYGTDFAPDEARR-----TLAGLPASDEV----RRAAVRLW 319
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 2e-06
Identities = 80/525 (15%), Positives = 153/525 (29%), Gaps = 148/525 (28%)
Query: 38 NSPSFRRLNASRT-PRREVRSASLQWFRSNR--LVY--------WLLLITL--------- 77
++ F + N SR P ++R A L R + L+ W+ L
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQA-LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 78 -----WTYLGFY---------VQSRWAHGENNDKFLGFGGKRRNEIVDSNQNKRRDLIAN 123
W L +Q + N + S Q + R L+ +
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 124 HS---DLDI-----NNGTIKTLGADSKKIDMVLTQRRNNDASRRSVAKRKKSKRSSRGKG 175
L + N K ++LT R S A
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCK---ILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 176 RGKQKAKLDVESNYME---AQLP-EIPMTNASYGLLVGPFG-LTEDRILEWSPEKRSGTC 230
+ + Y++ LP E+ TN + D + W K C
Sbjct: 298 LTPDEV-KSLLLKYLDCRPQDLPREVLTTNP---RRLSIIAESIRDGLATWDNWKHV-NC 352
Query: 231 DRKG--------------------DFARF---VW-SRKFILIF-HELSMTGAPLSMMELA 265
D+ + F + + ++ + + + +L
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 266 TELL----SCGATVS--AVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGS 319
L +T+S ++ L + L E A + +++ P KT DL+
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHR-SIVDHYNIP--KTFDSDDLIP--- 466
Query: 320 AVCATWIDQYITRFPAGGSQVVWWI---MENRREYFDRAKLVLDRVKLL--VFLSESQTK 374
++DQY + I ++N +R+ L VFL
Sbjct: 467 ----PYLDQYF--Y--------SHIGHHLKNIEHP--------ERMTLFRMVFLDFR--- 501
Query: 375 QWLTWCEEEKLKLRSQPAVVPLSVND---ELAFVAGFTCSLNTPTSSPEKMRE--KRNLL 429
+L E+K++ S S+ + +L F + C N P E++ L
Sbjct: 502 -FL----EQKIRHDSTAWNASGSILNTLQQLKFYKPYICD-NDPK--YERLVNAILDFLP 553
Query: 430 R---DSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQ 471
+ + + + D+L ++L + + E A +++
Sbjct: 554 KIEENLICSK----YTDLLRIALM--AEDEA---IFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 9e-06
Identities = 67/462 (14%), Positives = 134/462 (29%), Gaps = 153/462 (33%)
Query: 295 IKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDR 354
K ++D + ++++ AV T ++W + +++E
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSKDAVSGTL--------------RLFWTLLSKQE---- 76
Query: 355 AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRS-QPAVVPLS--------VNDELAFV 405
+ V+ V ++L +K QP+++ ND F
Sbjct: 77 -----EMVQKFVEEVLRINYKFLM----SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 406 AGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESA 465
S + + R L +R + +L G G+ +
Sbjct: 128 KYNV-------SRLQPYLKLRQALL-ELRPAKNVLIDGVL---------GSGKTWVALDV 170
Query: 466 QLMIEQEPSMDDSK--IRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSE 523
L + + MD + N+ S +L+M + L + + +S
Sbjct: 171 CLSYKVQCKMDFKIFWL----NLKNCNSP---------ETVLEMLQKL-LYQIDPNWTSR 216
Query: 524 SFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGS 583
S N +R + + LRR + SK + L +L
Sbjct: 217 SDHSSNIKLRIHSIQA-----------------ELRRLLKSK---PYENCLLVL------ 250
Query: 584 KSNKVPYVKEILE-FLSQHSNLS-KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRV 641
V + F NLS K +L TTR V + T +
Sbjct: 251 --LNV-QNAKAWNAF-----NLSCKILL----TTR--------FKQVTDFLS-AATTTHI 289
Query: 642 TIEAMAFGVPVLGTDAGGTKEI----VEHNVTGLLHPP----GHPGA-QVLAQNLRYLLK 692
+++ + L D K + ++ L P +P ++A+++R
Sbjct: 290 SLDHHSMT---LTPDE--VKSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIR---D 339
Query: 693 NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI---YKCMKP 731
+ + K KL+ +I ++P
Sbjct: 340 GLATWD-------------NWKHVNCDKLTTIIESSLNVLEP 368
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 58/406 (14%), Positives = 118/406 (29%), Gaps = 127/406 (31%)
Query: 396 LSVNDELAFVAGFTC-----SLNTPTSSPE-------KMREKR-----NLLRDS----VR 434
LSV ++ AFV F C + S E K L V+
Sbjct: 22 LSVFED-AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80
Query: 435 KEMGLTDQD-----MLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489
K + + M + P + +E +++ +D+++ NV R
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE------QRDRLYNDNQVFAKYNVSRL 134
Query: 490 KSSLTSRHHLRGRGLLQMSDDVGL--------SSNELSVSSESFTQLNEPVRKNLLSPSL 541
+ L R L L+ + +V + + L V + V+ +
Sbjct: 135 QPYLKLRQALLE---LRPAKNVLIDGVLGSGKTWVALDVCL------SYKVQCKMDFKIF 185
Query: 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIG----SVGSKSNKVPY----VKE 593
+ ++ N ++ VL + Q L I S S+ + ++
Sbjct: 186 WLNLKNCNSP--------ETVL-----EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 594 ILEFLSQHSNLSKAML-----WTPA-------------TTRVASLYSAADVYVINSQGLG 635
L L + +L TTR V +
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR--------FKQVTDFLS-A 283
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEI----VEHNVTGLLHPP----GHPGA-QVLAQN 686
T ++++ + L D K + ++ L P +P ++A++
Sbjct: 284 ATTTHISLDHHSMT---LTPDE--VKSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAES 336
Query: 687 LRYLLKNPSVRERMAMEGRKKVERM------YLK----KHMYKKLS 722
+R + + K+ + L+ + M+ +LS
Sbjct: 337 IR---DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 2e-04
Identities = 82/618 (13%), Positives = 175/618 (28%), Gaps = 205/618 (33%)
Query: 114 QNKRRDLIANH-----SDLDINNGTIKTLGADSKK-IDMVLTQRRNNDASRR--SVAKRK 165
Q + +D+++ + D + SK+ ID ++ + + R K
Sbjct: 15 QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK 74
Query: 166 KSKRSSRGKGRGKQKAKLDVESNYMEAQLPEIPMTNASYGLLVGPFGLTEDR----ILEW 221
+ + + ++E L +Y L+ P TE R +
Sbjct: 75 QEEMVQK----------------FVEEVL------RINYKFLMSPIK-TEQRQPSMMTRM 111
Query: 222 SPEKRSGTCDRKGDFA-RFVWSRKFILIFH----ELS---------MTGAPLSMMELATE 267
E+R + FA V + L EL + G+ + +A +
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW--VALD 169
Query: 268 LLSCGATVSAVVLSKRGG------------------LMPELARRKIKVLEDRGEPSFKTS 309
+ S V K ++ +L + R + S
Sbjct: 170 VCL-----SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRV------- 362
++ I + R ++++ ++ LVL V
Sbjct: 225 LRIH-----------SIQAELRRL-----------LKSKP--YENCLLVLLNVQNAKAWN 260
Query: 363 ------KLLV---------FLSESQTKQW--------LTWCEEEKLKLRSQPAVVPLSVN 399
K+L+ FLS + T LT +E L + +
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT--PDEVKSLLLK--YLDCRPQ 316
Query: 400 D---ELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456
D E+ S+ E +R+ D+ + ++ SL+ + P +
Sbjct: 317 DLPREVLTTNPRRLSI-----IAESIRDGLATW-DNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 457 GQLLLVE----------SAQL-------MIEQEPSMDDSKIRKSRNV-GRKKSSLTSRHH 498
+ + L +I+ + + +K+ K V + K S S
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
Query: 499 LRGRGLLQMSDDVGL--------------SSNELSVSSE---SFTQL------NEPVRKN 535
+ +++ ++ L S++L ++ + E +
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490
Query: 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVG---------SKSN 586
L +F F L +K+ + D A ++ ++ ++
Sbjct: 491 TLFRMVFLDF------RF----LEQKI--RHDSTAWNASGSILNTLQQLKFYKPYICDND 538
Query: 587 KVP--YVKEILEFLSQHS 602
V IL+FL +
Sbjct: 539 PKYERLVNAILDFLPKIE 556
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 5e-05
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 16/103 (15%)
Query: 636 ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV------------- 682
E +G E GVP + T+ G +E + + G +
Sbjct: 529 EPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIET--NQAKDYGIYIVDRRFKAPDESVE 586
Query: 683 -LAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724
L + +K + + + + K M + +
Sbjct: 587 QLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKA 629
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.98 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.97 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.93 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.92 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.91 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.9 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.9 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.88 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.88 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.86 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.85 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.84 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.76 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.73 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.67 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.67 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.65 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.62 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.61 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.59 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.55 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.54 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.47 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.4 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.3 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.2 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.16 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.09 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.05 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.02 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.97 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.86 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.71 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.54 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.43 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 97.84 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.77 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.07 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 96.55 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 96.08 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 96.01 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 95.74 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 95.48 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 95.11 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 94.76 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 93.76 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 90.59 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 88.23 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 83.15 |
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=328.20 Aligned_cols=351 Identities=19% Similarity=0.278 Sum_probs=279.1
Q ss_pred ccCCeEEEEeCCCC--CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH-HhCCcEEEEcCCCch-----------
Q 004760 240 VWSRKFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEPS----------- 305 (732)
Q Consensus 240 ~~~~kIllI~h~ls--~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el-~~~gI~v~~~~~~~~----------- 305 (732)
|++.||++|++... .||++..+.+||++| .||+|.+++....+.....+ ...+++++..+....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMA 79 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHH
Confidence 45689999999776 899999999999999 69999999965544322333 467899988765431
Q ss_pred -hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHh------HHHhhhhhccccEEEEecHHhHHHhhh
Q 004760 306 -FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREY------FDRAKLVLDRVKLLVFLSESQTKQWLT 378 (732)
Q Consensus 306 -~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~------~~~~~~~l~r~~~li~vS~~~~~~~~~ 378 (732)
+.+..+||+||+++.....++..+.. ..+.+++++.+|.....+ ....+..+.+++.++++|+........
T Consensus 80 ~~~~~~~~Dvv~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 157 (394)
T 3okp_A 80 EIIREREIDNVWFGAAAPLALMAGTAK--QAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS 157 (394)
T ss_dssp HHHHHTTCSEEEESSCTTGGGGHHHHH--HTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCcchHHHHHHHHH--hcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH
Confidence 33477999999987655544433322 335666888776432111 111234456689999999987543111
Q ss_pred HHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCH
Q 004760 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQ 458 (732)
Q Consensus 379 ~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~ 458 (732)
. .+ + ...+.+||||+|.+.|.+....+ +..+|+.+|++++.++|+++|++.+.||+
T Consensus 158 ~-------~~--~----------~~~~~vi~ngv~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 158 A-------FG--S----------HPTFEHLPSGVDVKRFTPATPED-----KSATRKKLGFTDTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp H-------HC--S----------SSEEEECCCCBCTTTSCCCCHHH-----HHHHHHHTTCCTTCCEEEEESCSCGGGCH
T ss_pred h-------cC--C----------CCCeEEecCCcCHHHcCCCCchh-----hHHHHHhcCCCcCceEEEEEeccccccCH
Confidence 1 11 1 12458999999999998743322 36789999999988999999999999999
Q ss_pred HHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCC
Q 004760 459 LLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLS 538 (732)
Q Consensus 459 d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~ 538 (732)
+.+++|+..+.++.++
T Consensus 214 ~~li~a~~~l~~~~~~---------------------------------------------------------------- 229 (394)
T 3okp_A 214 DSLIKAMPQVIAARPD---------------------------------------------------------------- 229 (394)
T ss_dssp HHHHHHHHHHHHHSTT----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhhCCC----------------------------------------------------------------
Confidence 9999999999887665
Q ss_pred CCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hh
Q 004760 539 PSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TR 616 (732)
Q Consensus 539 p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~d 616 (732)
.+++++|+|+..+.++.++. ++.++|.|+|++ ++
T Consensus 230 ---------------------~~l~i~G~g~~~~~l~~~~~-----------------------~~~~~v~~~g~~~~~~ 265 (394)
T 3okp_A 230 ---------------------AQLLIVGSGRYESTLRRLAT-----------------------DVSQNVKFLGRLEYQD 265 (394)
T ss_dssp ---------------------CEEEEECCCTTHHHHHHHTG-----------------------GGGGGEEEEESCCHHH
T ss_pred ---------------------eEEEEEcCchHHHHHHHHHh-----------------------cccCeEEEcCCCCHHH
Confidence 35788898887777766652 566899999988 89
Q ss_pred HHHHHHHcCEEEEccCCCC-------CCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 617 VASLYSAADVYVINSQGLG-------ETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 617 v~~lysaADv~V~pS~~~~-------Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+..+|+.||++|+||. . |+||++++||||||+|||+++.||..|++.++ +|++++++|+ ++|+++|.+
T Consensus 266 ~~~~~~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~--~~l~~~i~~ 340 (394)
T 3okp_A 266 MINTLAAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDV--DKLSELLIE 340 (394)
T ss_dssp HHHHHHHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCH--HHHHHHHHH
T ss_pred HHHHHHhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCH--HHHHHHHHH
Confidence 9999999999999998 7 99999999999999999999999999999998 9999999888 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+++|++.+++|++++++.++++|+|+.+++++.++|+++.+.
T Consensus 341 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 341 LLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999988764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-37 Score=329.09 Aligned_cols=383 Identities=17% Similarity=0.194 Sum_probs=268.9
Q ss_pred eccCCcchhhhcccCcccccccccccchhhhhccCCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCCh
Q 004760 208 VGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLM 287 (732)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~ 287 (732)
|++|-+.|..|=...|.-..++--+-.++++-|++.||+++++.+..||++..+.+||++|.+.||+|.+++....+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~ 85 (416)
T 2x6q_A 6 VKEFSSGKRKLEDYKSIIGEEEVSKIQEKAEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFF 85 (416)
T ss_dssp CC-----CCCGGGGHHHHHHHHHHHHHHHHHTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHH
T ss_pred ehhccccccchhccccccCchhHHHHHHhhhhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchh
Confidence 34444444444334333333333455667888888999999999999999999999999999999999999865443221
Q ss_pred h---HHH--hCCcEEEEcCCC--ch----------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh-
Q 004760 288 P---ELA--RRKIKVLEDRGE--PS----------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR- 349 (732)
Q Consensus 288 ~---el~--~~gI~v~~~~~~--~~----------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~- 349 (732)
+ .+. -.+++.+..... .. +.+..+||+||+++.....+. .......+++|++|....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-----~~~~~~~p~v~~~h~~~~~ 160 (416)
T 2x6q_A 86 NVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI-----EFYEKKSPWLWRCHIDLSS 160 (416)
T ss_dssp HHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGG-----GGSCCCSCEEEECCSCCSS
T ss_pred hhhcccceeecccccccccHHHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHH-----HHHHhcCCEEEEEccccCC
Confidence 1 111 123222222110 00 112458999999975543221 112222557777764321
Q ss_pred ---HhHHHhhhhhccccEEEE-ecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHH
Q 004760 350 ---EYFDRAKLVLDRVKLLVF-LSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREK 425 (732)
Q Consensus 350 ---~~~~~~~~~l~r~~~li~-vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ek 425 (732)
.+.......+.+.+.+++ +|+.. ...... ..+.+||||+|...+.+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~~~s~~~-------------~~~~~~-----------~~~~vi~ngvd~~~~~~~~~~~~ 216 (416)
T 2x6q_A 161 PNREFWEFLRRFVEKYDRYIFHLPEYV-------------QPELDR-----------NKAVIMPPSIDPLSEKNVELKQT 216 (416)
T ss_dssp CCHHHHHHHHHHHTTSSEEEESSGGGS-------------CTTSCT-----------TTEEECCCCBCTTSTTTSCCCHH
T ss_pred ccHHHHHHHHHHHHhCCEEEEechHHH-------------HhhCCc-----------cceEEeCCCCChhhhcccccChh
Confidence 222222334445566554 33321 111111 13479999999877653211000
Q ss_pred hHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccc
Q 004760 426 RNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLL 505 (732)
Q Consensus 426 r~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll 505 (732)
.+..+|+++|++++.++|+++|++.+.||++.+++|+..+.++.|+
T Consensus 217 ---~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~------------------------------- 262 (416)
T 2x6q_A 217 ---EILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPG------------------------------- 262 (416)
T ss_dssp ---HHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTT-------------------------------
T ss_pred ---hHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCC-------------------------------
Confidence 2367889999999999999999999999999999999999877665
Q ss_pred cccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCC
Q 004760 506 QMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKS 585 (732)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~ 585 (732)
.+++++|+|+...
T Consensus 263 ------------------------------------------------------~~l~i~G~g~~~~------------- 275 (416)
T 2x6q_A 263 ------------------------------------------------------VQLLLVGVMAHDD------------- 275 (416)
T ss_dssp ------------------------------------------------------CEEEEEECCCTTC-------------
T ss_pred ------------------------------------------------------eEEEEEecCcccc-------------
Confidence 2577788875310
Q ss_pred CChhhHHHHHHHHHhcCCCCCcEEEccchh-----hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh
Q 004760 586 NKVPYVKEILEFLSQHSNLSKAMLWTPATT-----RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT 660 (732)
Q Consensus 586 ~~~~y~k~il~~l~~~l~l~~~V~f~G~~~-----dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~ 660 (732)
+...+.++.+.+.+++.++|.|+|+.+ ++..+|++||++|+||. .|+||++++||||||+|||+|+.||+
T Consensus 276 ---~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~ 350 (416)
T 2x6q_A 276 ---PEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGI 350 (416)
T ss_dssp ---HHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHH
T ss_pred ---hhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCC
Confidence 111122233334447888999999653 89999999999999998 89999999999999999999999999
Q ss_pred hhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 661 KEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 661 ~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.|++.++.+|++++ |+ ++|+++|..+++|++.+++|++++++.+++.|+|+.+++++.++|++++
T Consensus 351 ~e~i~~~~~g~l~~--d~--~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 351 KFQIVDGETGFLVR--DA--NEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHCCBTTTEEEES--SH--HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred hhheecCCCeEEEC--CH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99999999999997 55 9999999999999999999999999999989999999999999998875
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=326.94 Aligned_cols=357 Identities=16% Similarity=0.181 Sum_probs=265.4
Q ss_pred cCCeEEEEeCC---CCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH-----------------HHhCCcEEEEc
Q 004760 241 WSRKFILIFHE---LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-----------------LARRKIKVLED 300 (732)
Q Consensus 241 ~~~kIllI~h~---ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e-----------------l~~~gI~v~~~ 300 (732)
++.||++|+++ ...||++..+.+||++|.+.||+|++++....+..... ....|++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35689999999 56799999999999999999999999996544332110 03568888766
Q ss_pred CC----------------Cch----------hh-----hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh
Q 004760 301 RG----------------EPS----------FK-----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR 349 (732)
Q Consensus 301 ~~----------------~~~----------~~-----~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~ 349 (732)
+. ... +. +..+||+||+++... .++..++. ...+.+ +++++|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~-~~~~~~~~-~~~~~~-~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAGALIK-KYFKIP-AVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG-HHHHHHHH-HHHCCC-EEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh-hhhHHHHh-hccCCC-EEEEeccccc
Confidence 54 000 11 145999999997533 22222232 333444 6777764321
Q ss_pred -----HhH--------------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecC
Q 004760 350 -----EYF--------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTC 410 (732)
Q Consensus 350 -----~~~--------------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpn 410 (732)
.++ ...+..+..++.++++|+..... .. -.++..+ + .+.+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~----~~~~~~~-------~----~i~vi~n 219 (439)
T 3fro_A 158 SKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLID---EW----GFFRNFE-------G----KITYVFN 219 (439)
T ss_dssp CCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHH---TH----HHHGGGT-------T----SEEECCC
T ss_pred ccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHH---Hh----hhhhhcC-------C----ceeecCC
Confidence 111 11223344588999999986432 00 0011111 2 3589999
Q ss_pred CCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccc
Q 004760 411 SLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489 (732)
Q Consensus 411 gvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~ 489 (732)
|+|...|.+..........+..+|+++|++++ ++|+++|++. +.||++.+++|++.+.++...
T Consensus 220 gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~--------------- 283 (439)
T 3fro_A 220 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--------------- 283 (439)
T ss_dssp CCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGG---------------
T ss_pred CCCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccC---------------
Confidence 99999998762100011134789999999888 9999999999 999999999999999764310
Q ss_pred cccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch
Q 004760 490 KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK 569 (732)
Q Consensus 490 ~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~ 569 (732)
+..+++++|.|+
T Consensus 284 --------------------------------------------------------------------~~~~l~i~G~g~ 295 (439)
T 3fro_A 284 --------------------------------------------------------------------QEMRFIIIGKGD 295 (439)
T ss_dssp --------------------------------------------------------------------GGEEEEEECCCC
T ss_pred --------------------------------------------------------------------CCeEEEEEcCCC
Confidence 124688889887
Q ss_pred hh--hhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEcc--chhhHHHHHHHcCEEEEccCCCCCCCcHHHHHH
Q 004760 570 QQ--QALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTP--ATTRVASLYSAADVYVINSQGLGETFGRVTIEA 645 (732)
Q Consensus 570 ~~--~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G--~~~dv~~lysaADv~V~pS~~~~Egfg~vilEA 645 (732)
.. +.++.++ +.++ +.+.|+| ..+++..+|++||++|+||. .|+||++++||
T Consensus 296 ~~~~~~l~~~~---------------------~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EA 350 (439)
T 3fro_A 296 PELEGWARSLE---------------------EKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEA 350 (439)
T ss_dssp HHHHHHHHHHH---------------------HHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHH
T ss_pred hhHHHHHHHHH---------------------hhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHH
Confidence 54 4444443 3334 6788999 44789999999999999998 89999999999
Q ss_pred HHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 646 MAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 646 MA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
||||+|||+|+.||+.|+++++ +|++++++|+ ++|+++|.++++ +++.+++|++++++.+ +.|+|+.+++++.++
T Consensus 351 ma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~--~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~ 426 (439)
T 3fro_A 351 MCLGAIPIASAVGGLRDIITNE-TGILVKAGDP--GELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKA 426 (439)
T ss_dssp HHTTCEEEEESSTHHHHHCCTT-TCEEECTTCH--HHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHH
T ss_pred HHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHH
Confidence 9999999999999999999887 9999999988 999999999999 9999999999999999 569999999999999
Q ss_pred HHHhhcC
Q 004760 725 IYKCMKP 731 (732)
Q Consensus 725 ~~~~l~~ 731 (732)
|++++..
T Consensus 427 ~~~~~~~ 433 (439)
T 3fro_A 427 YTGSIDR 433 (439)
T ss_dssp HHTCSCC
T ss_pred HHHHHHh
Confidence 9998764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=319.97 Aligned_cols=349 Identities=19% Similarity=0.259 Sum_probs=259.6
Q ss_pred cCCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc---------h------
Q 004760 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP---------S------ 305 (732)
Q Consensus 241 ~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~---------~------ 305 (732)
++.++...... ..||++..+.+||++|.++||+|.+++....... .....++.+....... .
T Consensus 14 ~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (394)
T 2jjm_A 14 MKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSVFQYPPYDLALASK 90 (394)
T ss_dssp -CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHHHHHHH
T ss_pred heeeeehhcCC-CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc--cccCCceEEEecccccccccccccccHHHHHH
Confidence 34566665553 4899999999999999999999999985432221 1123455554332210 0
Q ss_pred ---hhhhcCccEEEeCCchhhHHHHHHHHhhcCC-CccEEEEEeechh-------HhHHHhhhhhccccEEEEecHHhHH
Q 004760 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAG-GSQVVWWIMENRR-------EYFDRAKLVLDRVKLLVFLSESQTK 374 (732)
Q Consensus 306 ---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~-~~~ivw~i~e~r~-------~~~~~~~~~l~r~~~li~vS~~~~~ 374 (732)
+.+..+||+||+++.....+ ..++.....+ ..++++++|.... .+....+..+.+++.++++|+....
T Consensus 91 l~~~l~~~~~Dvv~~~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 169 (394)
T 2jjm_A 91 MAEVAQRENLDILHVHYAIPHAI-CAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIN 169 (394)
T ss_dssp HHHHHHHHTCSEEEECSSTTHHH-HHHHHHHHTTTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred HHHHHHHcCCCEEEEcchhHHHH-HHHHHHHhhcCCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 22367999999997654332 2333333333 3457777764211 1111123345568999999998744
Q ss_pred HhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCC
Q 004760 375 QWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINP 454 (732)
Q Consensus 375 ~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~ 454 (732)
. + .+....+ ..+.+||||+|.+.|.+... ..+|++++++++.++|+++|++.+
T Consensus 170 ~----~----~~~~~~~-----------~~~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 170 E----T----HELVKPN-----------KDIQTVYNFIDERVYFKRDM--------TQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp H----H----HHHTCCS-----------SCEEECCCCCCTTTCCCCCC--------HHHHHHTTCC---CEEEEECCCCG
T ss_pred H----H----HHhhCCc-----------ccEEEecCCccHHhcCCcch--------HHHHHHcCCCCCCeEEEEeecccc
Confidence 3 2 1111111 13489999999998876533 456788999888889999999999
Q ss_pred CCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccc
Q 004760 455 GKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRK 534 (732)
Q Consensus 455 ~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 534 (732)
.||++.+++|+..+.++ ++
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~------------------------------------------------------------ 241 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VD------------------------------------------------------------ 241 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SC------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHHhh-CC------------------------------------------------------------
Confidence 99999999999999765 22
Q ss_pred cCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch
Q 004760 535 NLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT 614 (732)
Q Consensus 535 n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~ 614 (732)
.+++++|+|+..+.++.++. .+++.++|.|+|+.
T Consensus 242 -------------------------~~l~i~G~g~~~~~l~~~~~---------------------~~~l~~~v~~~g~~ 275 (394)
T 2jjm_A 242 -------------------------AKLLLVGDGPEFCTILQLVK---------------------NLHIEDRVLFLGKQ 275 (394)
T ss_dssp -------------------------CEEEEECCCTTHHHHHHHHH---------------------TTTCGGGBCCCBSC
T ss_pred -------------------------CEEEEECCchHHHHHHHHHH---------------------HcCCCCeEEEeCch
Confidence 25778888877666665553 33778899999999
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~ 694 (732)
+++..+|+.||++|+||. .|+||++++||||||+|||+++.||..|+++++.+|++++++|+ ++|+++|..+++|+
T Consensus 276 ~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~--~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDT--TGVADQAIQLLKDE 351 (394)
T ss_dssp SCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCH--HHHHHHHHHHHHCH
T ss_pred hhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCH--HHHHHHHHHHHcCH
Confidence 999999999999999998 99999999999999999999999999999999999999999888 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 695 SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 695 ~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+.+++|++++++.+.+.|+|+.+++++.++|++++..
T Consensus 352 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 352 ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988899999999999999998764
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.32 Aligned_cols=354 Identities=18% Similarity=0.259 Sum_probs=260.6
Q ss_pred CeEEEEeCCC---------CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChh-HHHhCCcEEEEcCCCc-------h
Q 004760 243 RKFILIFHEL---------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP-ELARRKIKVLEDRGEP-------S 305 (732)
Q Consensus 243 ~kIllI~h~l---------s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~-el~~~gI~v~~~~~~~-------~ 305 (732)
.||++|++.. ..||++..+.+||++|.+.||+|.+++......... .....|++++..+... .
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~ 100 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEE 100 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGGG
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchhH
Confidence 6899999865 359999999999999999999999999654322111 0113678887654321 0
Q ss_pred -------h--------hhhc-CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH-------------hHH--H
Q 004760 306 -------F--------KTSM-KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE-------------YFD--R 354 (732)
Q Consensus 306 -------~--------~~~~-k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~-------------~~~--~ 354 (732)
+ .+.. +||+||++.... .++ .++.....+.+ +++.+|..... ... .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~-~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (438)
T 3c48_A 101 LPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQV-GWLLRDLWRIP-LIHTAHTLAAVKNSYRDDSDTPESEARRIC 177 (438)
T ss_dssp GGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHH-HHHHHHHHTCC-EEEECSSCHHHHSCC----CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEeCCccH-HHH-HHHHHHHcCCC-EEEEecCCcccccccccccCCcchHHHHHH
Confidence 0 1112 599999875321 122 22222223444 66666543110 000 1
Q ss_pred hhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHH
Q 004760 355 AKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVR 434 (732)
Q Consensus 355 ~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R 434 (732)
.+..+..++.++++|+..... +.+ .++..+ ..+.+||||+|.+.|.+..... +..+|
T Consensus 178 ~~~~~~~~d~ii~~s~~~~~~----~~~---~~g~~~-----------~k~~vi~ngvd~~~~~~~~~~~-----~~~~r 234 (438)
T 3c48_A 178 EQQLVDNADVLAVNTQEEMQD----LMH---HYDADP-----------DRISVVSPGADVELYSPGNDRA-----TERSR 234 (438)
T ss_dssp HHHHHHHCSEEEESSHHHHHH----HHH---HHCCCG-----------GGEEECCCCCCTTTSCCC---------CHHHH
T ss_pred HHHHHhcCCEEEEcCHHHHHH----HHH---HhCCCh-----------hheEEecCCccccccCCcccch-----hhhhH
Confidence 123445589999999987543 210 123322 2358999999999887654321 24578
Q ss_pred HHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCc
Q 004760 435 KEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLS 514 (732)
Q Consensus 435 ~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~ 514 (732)
+++|++++.++|+++|++.+.||++.+++|+..+.++.|..
T Consensus 235 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~--------------------------------------- 275 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR--------------------------------------- 275 (438)
T ss_dssp HHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC---------------------------------------
T ss_pred HhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc---------------------------------------
Confidence 99999989999999999999999999999999998876630
Q ss_pred ccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccC----chhhhhHhhhhhccCCCCCChhh
Q 004760 515 SNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSD----GKQQQALKILIGSVGSKSNKVPY 590 (732)
Q Consensus 515 ~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~----G~~~~~Lk~li~~~G~~~~~~~y 590 (732)
..+++++|. |+..+.++.++
T Consensus 276 --------------------------------------------~~~l~i~G~~~~~g~~~~~l~~~~------------ 299 (438)
T 3c48_A 276 --------------------------------------------NLRVIICGGPSGPNATPDTYRHMA------------ 299 (438)
T ss_dssp --------------------------------------------SEEEEEECCBC------CHHHHHH------------
T ss_pred --------------------------------------------ceEEEEEeCCCCCCcHHHHHHHHH------------
Confidence 135667777 54444444444
Q ss_pred HHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCc
Q 004760 591 VKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNV 668 (732)
Q Consensus 591 ~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~ 668 (732)
+.+++.++|.|+|++ +++..+|+.||++|+||. .|+||++++||||||+|||+++.+|..|++.++.
T Consensus 300 ---------~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~ 368 (438)
T 3c48_A 300 ---------EELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEGE 368 (438)
T ss_dssp ---------HHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTT
T ss_pred ---------HHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCCC
Confidence 334788899999988 789999999999999997 9999999999999999999999999999999999
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 669 TGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 669 ~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+|++++++|+ ++|+++|.++++|++.+++|++++++.+++ |+|+.+++++.++|++++..
T Consensus 369 ~g~~~~~~d~--~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 369 TGLLVDGHSP--HAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp TEEEESSCCH--HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT
T ss_pred cEEECCCCCH--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhh
Confidence 9999998888 999999999999999999999999999998 99999999999999998764
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=326.73 Aligned_cols=370 Identities=15% Similarity=0.176 Sum_probs=266.2
Q ss_pred CeEEEEeCCC-------------CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH----HH----hCCcEEEEcC
Q 004760 243 RKFILIFHEL-------------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE----LA----RRKIKVLEDR 301 (732)
Q Consensus 243 ~kIllI~h~l-------------s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e----l~----~~gI~v~~~~ 301 (732)
.||++|++.. ..||++..+.+||++|.+.||+|++++....+...+. +. ..|++++..+
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 87 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIP 87 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEEC
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEec
Confidence 6999999853 5799999999999999999999999996543321111 21 3688888765
Q ss_pred CCc------------------hh---hhh--cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhH------
Q 004760 302 GEP------------------SF---KTS--MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYF------ 352 (732)
Q Consensus 302 ~~~------------------~~---~~~--~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~------ 352 (732)
... .+ .++ .+||+||+|+.. ..++. .+.....+.+ +++++|.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~-~~~~~-~~~~~~~~~p-~v~~~H~~~~~~~~~~~~~ 164 (499)
T 2r60_A 88 FGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGD-GGLAG-VLLKNIKGLP-FTFTGHSLGAQKMEKLNVN 164 (499)
T ss_dssp CSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHH-HHHHH-HHHHHHHCCC-EEEECSSCHHHHHHTTCCC
T ss_pred CCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCc-chHHH-HHHHHhcCCc-EEEEccCcccccchhhccC
Confidence 321 01 112 589999998642 22222 2222233445 6677765321100
Q ss_pred -----------------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhh---cc-CCCccccccCCCccceEEeecCC
Q 004760 353 -----------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLK---LR-SQPAVVPLSVNDELAFVAGFTCS 411 (732)
Q Consensus 353 -----------------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~---l~-~~~~~v~l~~n~~~~~v~vIpng 411 (732)
...+..+..++.++++|+..... + .. ++ ... ......+.+||||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~----~----~~~~~~g~~~~-------~~~~~ki~vi~ng 229 (499)
T 2r60_A 165 TSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG----Q----YSHDLYRGAVN-------VEDDDKFSVIPPG 229 (499)
T ss_dssp STTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHH----T----TTSGGGTTTCC-------TTCGGGEEECCCC
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHH----H----Hhhhccccccc-------ccCCCCeEEECCC
Confidence 01123445589999999987442 1 11 11 100 0001245899999
Q ss_pred CCCCCCCchhhHHHhHHhHHHHHHHhC-----CCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhcccc
Q 004760 412 LNTPTSSPEKMREKRNLLRDSVRKEMG-----LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNV 486 (732)
Q Consensus 412 vd~~~f~~~~~~ekr~~~r~~~R~~lg-----l~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i 486 (732)
+|.+.|.+....+ .+..+|+++| ++++.++|+++|++.+.||++.+++|+..+.++.++
T Consensus 230 vd~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~------------ 293 (499)
T 2r60_A 230 VNTRVFDGEYGDK----IKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDK------------ 293 (499)
T ss_dssp BCTTTSSSCCCHH----HHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHH------------
T ss_pred cChhhcCccchhh----hHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCC------------
Confidence 9999887754322 2366888888 888888999999999999999999999988665332
Q ss_pred ccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEecc
Q 004760 487 GRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKS 566 (732)
Q Consensus 487 ~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG 566 (732)
...++++|
T Consensus 294 ------------------------------------------------------------------------~~~l~i~G 301 (499)
T 2r60_A 294 ------------------------------------------------------------------------ANLVLTLR 301 (499)
T ss_dssp ------------------------------------------------------------------------CEEEEEES
T ss_pred ------------------------------------------------------------------------ceEEEEEC
Confidence 02456666
Q ss_pred C--chhhhhHhhhhhccCCC-CCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHc----CEEEEccCCCCCC
Q 004760 567 D--GKQQQALKILIGSVGSK-SNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAA----DVYVINSQGLGET 637 (732)
Q Consensus 567 ~--G~~~~~Lk~li~~~G~~-~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaA----Dv~V~pS~~~~Eg 637 (732)
. |+... ++.. ..+.+|.+++.+. .+.+++.++|+|+|++ +++..+|++| |++|+||. .|+
T Consensus 302 ~~~~~~~~--------y~~l~~~~~~y~~~l~~~-~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg 370 (499)
T 2r60_A 302 GIENPFED--------YSRAGQEEKEILGKIIEL-IDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEP 370 (499)
T ss_dssp SCSBTTTB--------CTTSCHHHHHHHHHHHHH-HHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBC
T ss_pred CCCCcccc--------cccccccchHHHHHHHHH-HHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCC
Confidence 6 22000 0000 0001122333333 3445888999999986 8999999999 99999998 899
Q ss_pred CcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHH
Q 004760 638 FGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHM 717 (732)
Q Consensus 638 fg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~ 717 (732)
||++++||||||+|||+|+.||+.|++.++.+|++++++|+ ++|+++|..+++|++.+++|++++++.+.++|+|+.+
T Consensus 371 ~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~--~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~ 448 (499)
T 2r60_A 371 FGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDP--EDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQET 448 (499)
T ss_dssp CCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCH--HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHH
T ss_pred CCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999899999999888 9999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHhhcC
Q 004760 718 YKKLSQVIYKCMKP 731 (732)
Q Consensus 718 ~~~~~ev~~~~l~~ 731 (732)
++++.++|++++..
T Consensus 449 ~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 449 ARGYLEVIQEIADR 462 (499)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998753
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-35 Score=306.24 Aligned_cols=343 Identities=17% Similarity=0.208 Sum_probs=252.3
Q ss_pred eEEEEeCC-CCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch---------------hh
Q 004760 244 KFILIFHE-LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------FK 307 (732)
Q Consensus 244 kIllI~h~-ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------~~ 307 (732)
||++|++. ...||++..+.+||++|.+.||+|.+++....+... .+++++..+.... +.
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i 76 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWVQNHL 76 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC-----CCcEEEEEccCcccchhhHHHHHHHHHHHH
Confidence 68999887 467999999999999999999999999965444332 4788877665321 22
Q ss_pred hhcCccEEEeCCchhhHH--------HHHHHHhhcCCCccEEEEEeechhHhHHH-hhhhhc--cccEEEEecHHhHHHh
Q 004760 308 TSMKADLVIAGSAVCATW--------IDQYITRFPAGGSQVVWWIMENRREYFDR-AKLVLD--RVKLLVFLSESQTKQW 376 (732)
Q Consensus 308 ~~~k~DlVia~Sav~~~~--------i~~~i~~~~~~~~~ivw~i~e~r~~~~~~-~~~~l~--r~~~li~vS~~~~~~~ 376 (732)
+..+||+||+++...... ....+.+. .+... .. ..+...+.. .+..+. .++.++++|+......
T Consensus 77 ~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 151 (374)
T 2iw1_A 77 KEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQE-KGFLY---RL-TSRYRHYAAFERATFEQGKSTKLMMLTDKQIADF 151 (374)
T ss_dssp HHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHH-CCHHH---HT-SHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHH
T ss_pred hccCCCEEEEecCCCCceeeeccccccceeeeec-ccchh---hh-cHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHH
Confidence 367999999886322110 00011000 00000 00 000011111 111122 4788999999875431
Q ss_pred hhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCC
Q 004760 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456 (732)
Q Consensus 377 ~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~K 456 (732)
.. .++..+ ..+.+||||+|.+.|.+....+ .+..+|+++|++++.++|+++|++.+.|
T Consensus 152 ~~-------~~~~~~-----------~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~G~~~~~K 209 (374)
T 2iw1_A 152 QK-------HYQTEP-----------ERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFGRK 209 (374)
T ss_dssp HH-------HHCCCG-----------GGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTTTT
T ss_pred HH-------HhCCCh-----------hheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCCeEEEEeccchhhc
Confidence 11 123222 2358999999999887654321 2367899999999999999999999999
Q ss_pred CHHHHHHHHHHhHHh-CCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCccccc
Q 004760 457 GQLLLVESAQLMIEQ-EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535 (732)
Q Consensus 457 G~d~LLeA~~~l~~~-~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n 535 (732)
|++.+++|+..+.++ .++
T Consensus 210 ~~~~li~a~~~l~~~~~~~------------------------------------------------------------- 228 (374)
T 2iw1_A 210 GVDRSIEALASLPESLRHN------------------------------------------------------------- 228 (374)
T ss_dssp THHHHHHHHHTSCHHHHHT-------------------------------------------------------------
T ss_pred CHHHHHHHHHHhHhccCCc-------------------------------------------------------------
Confidence 999999999987543 222
Q ss_pred CCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchh
Q 004760 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT 615 (732)
Q Consensus 536 ~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~ 615 (732)
.+++++|.|+. +.++.++ +.+++.++|.|+|+.+
T Consensus 229 ------------------------~~l~i~G~g~~-~~~~~~~---------------------~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 229 ------------------------TLLFVVGQDKP-RKFEALA---------------------EKLGVRSNVHFFSGRN 262 (374)
T ss_dssp ------------------------EEEEEESSSCC-HHHHHHH---------------------HHHTCGGGEEEESCCS
T ss_pred ------------------------eEEEEEcCCCH-HHHHHHH---------------------HHcCCCCcEEECCCcc
Confidence 35777888753 3333333 2337888999999999
Q ss_pred hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEEC-CCCCcHHHHHHHHHHHhcCH
Q 004760 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP-PGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 616 dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~-~~d~~~e~La~aL~~LL~n~ 694 (732)
++..+|+.||++|+||. .|+||++++||||||+|||+++.+|..|+++++.+|++++ ++|+ ++|+++|..+++|+
T Consensus 263 ~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~--~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 263 DVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQ--EQLNEVLRKALTQS 338 (374)
T ss_dssp CHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCH--HHHHHHHHHHHHCH
T ss_pred cHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCH--HHHHHHHHHHHcCh
Confidence 99999999999999998 8999999999999999999999999999999989999998 7777 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 695 SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 695 ~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.+++|++++++.+++ |+|..+.+++.++++.++.
T Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 339 PLRMAWAENARHYADT-QDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHhhc
Confidence 9999999999999985 7999999999999987654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=316.01 Aligned_cols=359 Identities=16% Similarity=0.152 Sum_probs=253.9
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH----------------------HhCCcEE
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL----------------------ARRKIKV 297 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el----------------------~~~gI~v 297 (732)
||++|+++. ..||++..+.+||++|.+.||+|.|++....+ ....+ ...|+++
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPA-VKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHH-HHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 799999987 47999999999999999999999999964321 11110 1367888
Q ss_pred EEcCCC----------c-----------------h-----hh----hhcCccEEEeCCchhhHHHHHHHHhhcCCCccEE
Q 004760 298 LEDRGE----------P-----------------S-----FK----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVV 341 (732)
Q Consensus 298 ~~~~~~----------~-----------------~-----~~----~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~iv 341 (732)
+..+.. . . +. +..+||+||+|+.. ..++..++........+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~-~~~~~~~~~~~~~~~~p~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQ-AAMTPVYMRYAETPEIPSL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHH-HTTHHHHHHHSSSCCCCEE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccc-hhHHHHHHhhcccCCCCEE
Confidence 754210 0 0 11 25689999998632 2223233332211233477
Q ss_pred EEEeechh------H----------hH-----------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCC-cc
Q 004760 342 WWIMENRR------E----------YF-----------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQP-AV 393 (732)
Q Consensus 342 w~i~e~r~------~----------~~-----------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~-~~ 393 (732)
+++|.... . ++ ...+..+..++.++++|+.......... ++... .+
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~------~g~~~~~~ 233 (485)
T 1rzu_A 160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAE------FGMGLEGV 233 (485)
T ss_dssp EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHH------HHTTCHHH
T ss_pred EEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccc------cCcchHHH
Confidence 77765310 0 00 0112334558899999998644311100 01000 00
Q ss_pred ccccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCCC-CEEEEEEecCCCCCCHHHH
Q 004760 394 VPLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTDQ-DMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 394 v~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~~-~~lil~vGri~~~KG~d~L 461 (732)
... . ...+.+||||+|.+.|.+.... +.+...+..+|+++|++++ +++|+++|++.+.||++.+
T Consensus 234 ~~~--~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~l 309 (485)
T 1rzu_A 234 IGS--R--AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLM 309 (485)
T ss_dssp HHT--T--GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHH
T ss_pred HHh--h--cCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHH
Confidence 000 0 1235899999999988765320 0011124678999999875 6799999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
++|+..+.+. +
T Consensus 310 i~a~~~l~~~--~------------------------------------------------------------------- 320 (485)
T 1rzu_A 310 AEAVDEIVSL--G------------------------------------------------------------------- 320 (485)
T ss_dssp HTTHHHHHHT--T-------------------------------------------------------------------
T ss_pred HHHHHHHHhc--C-------------------------------------------------------------------
Confidence 9999998652 2
Q ss_pred ccccCCCCccccCCcccceeEEeccCchh--hhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEE-Eccchhh-H
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGKQ--QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTR-V 617 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~G~~--~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~-f~G~~~d-v 617 (732)
.+++++|+|+. .+.++.++ +.++ ++|. |.|+..+ +
T Consensus 321 ------------------~~l~ivG~g~~~~~~~l~~~~---------------------~~~~--~~v~~~~g~~~~~~ 359 (485)
T 1rzu_A 321 ------------------GRLVVLGAGDVALEGALLAAA---------------------SRHH--GRVGVAIGYNEPLS 359 (485)
T ss_dssp ------------------CEEEEEECBCHHHHHHHHHHH---------------------HHTT--TTEEEEESCCHHHH
T ss_pred ------------------ceEEEEeCCchHHHHHHHHHH---------------------HhCC--CcEEEecCCCHHHH
Confidence 25778888852 33333333 2223 6786 7898755 5
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccC---------ceEEEECCCCCcHHHHHHHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN---------VTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g---------~~Gll~~~~d~~~e~La~aL~ 688 (732)
..+|++||++|+||. .|+||++++||||||+|||+|+.||+.|++.++ .+|++++++|+ ++|+++|.
T Consensus 360 ~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~--~~la~~i~ 435 (485)
T 1rzu_A 360 HLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTL--DGLKQAIR 435 (485)
T ss_dssp HHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSH--HHHHHHHH
T ss_pred HHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCH--HHHHHHHH
Confidence 899999999999998 899999999999999999999999999999998 89999999888 99999999
Q ss_pred HHh---cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 689 YLL---KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 689 ~LL---~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
.++ +|++.+++|++++++ +.|+|+.+++++.++|++++..
T Consensus 436 ~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 436 RTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISK 478 (485)
T ss_dssp HHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCC
Confidence 999 799999999999874 6899999999999999998864
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=306.10 Aligned_cols=347 Identities=17% Similarity=0.190 Sum_probs=247.8
Q ss_pred eEEEEeCCCC-CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCCh-------hHHHhCCcEEEE-cCCC-c---hhhhhc
Q 004760 244 KFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLM-------PELARRKIKVLE-DRGE-P---SFKTSM 310 (732)
Q Consensus 244 kIllI~h~ls-~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~-------~el~~~gI~v~~-~~~~-~---~~~~~~ 310 (732)
||++|++... .||++.++.+||++|.+. |+|.+++....|... .......+..+. .... . ......
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 80 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDVH 80 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHHHhc
Confidence 7888876554 589999999999999999 999999976654211 000000000000 0000 0 123467
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCC--CccEEEEEeechhHhHHHhhhhhcccc--EEEEecHHhHHHhhhHHHhhhhh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAG--GSQVVWWIMENRREYFDRAKLVLDRVK--LLVFLSESQTKQWLTWCEEEKLK 386 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~--~~~ivw~i~e~r~~~~~~~~~~l~r~~--~li~vS~~~~~~~~~~~~~e~i~ 386 (732)
+||+||+++... +....+.....- ...++...+.............+.+.+ .++++|+...+. + .+
T Consensus 81 ~~Div~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~----~----~~ 150 (413)
T 3oy2_A 81 KPDIVMIYNDPI--VIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISD----I----CN 150 (413)
T ss_dssp CCSEEEEEECHH--HHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTTEEEEEESSTHHHHH----H----HH
T ss_pred CCCEEEEcchHH--HHHHHHHHhccCCCCCceeeeccccchhhHHHHHHHHhccCCceEEEcCHHHHHH----H----HH
Confidence 999999984322 122222222211 122333333211111111244556655 999999987543 2 12
Q ss_pred ccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCCHHHHHHH
Q 004760 387 LRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLLVES 464 (732)
Q Consensus 387 l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG~d~LLeA 464 (732)
++. + ..+.+||||+|.+.|. ..|+.+++++ +.++|+++|++.+.||++.+++|
T Consensus 151 ~~~-~-----------~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a 205 (413)
T 3oy2_A 151 YGC-K-----------VPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLA 205 (413)
T ss_dssp TTC-C-----------SCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHH
T ss_pred cCC-C-----------CceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHH
Confidence 222 1 1358999999999881 1356788887 88999999999999999999999
Q ss_pred HHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccc
Q 004760 465 AQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTS 544 (732)
Q Consensus 465 ~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~ 544 (732)
+..+.++.++
T Consensus 206 ~~~l~~~~~~---------------------------------------------------------------------- 215 (413)
T 3oy2_A 206 AARFISKYPD---------------------------------------------------------------------- 215 (413)
T ss_dssp HHHHHHHCTT----------------------------------------------------------------------
T ss_pred HHHHHHhCCC----------------------------------------------------------------------
Confidence 9999888776
Q ss_pred cCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCc-------EEEccch--h
Q 004760 545 IGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKA-------MLWTPAT--T 615 (732)
Q Consensus 545 ~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~-------V~f~G~~--~ 615 (732)
.+++++|+|+.... ..+.+.++.+.+.+++.++ |.|+|+. +
T Consensus 216 ---------------~~l~ivG~g~~~~~---------------~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~ 265 (413)
T 3oy2_A 216 ---------------AKVRFLCNSHHESK---------------FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDE 265 (413)
T ss_dssp ---------------CCEEEEEECCTTCS---------------CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHH
T ss_pred ---------------cEEEEEeCCcccch---------------hhHHHHHHHHHHHcCcccccccccceeeccCcCCHH
Confidence 24667777754310 0111222333344488876 8888985 6
Q ss_pred hHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCce---------------EE--EECCCCC
Q 004760 616 RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVT---------------GL--LHPPGHP 678 (732)
Q Consensus 616 dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~---------------Gl--l~~~~d~ 678 (732)
++..+|++||++|+||. .|+||++++||||||+|||+|+.||+.|++.++.+ |+ +++++|+
T Consensus 266 ~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~ 343 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDV 343 (413)
T ss_dssp HHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCH
T ss_pred HHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCH
Confidence 89999999999999998 99999999999999999999999999999998877 88 9998888
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
++|+++| .+++|++.+++|++++++.+.+.|+|+.+++++.++|++++..
T Consensus 344 --~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 344 --DDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp --HHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred --HHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999 9999999999999999999988999999999999999998864
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=310.94 Aligned_cols=359 Identities=14% Similarity=0.134 Sum_probs=252.5
Q ss_pred eEEEEeCCC----CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHH---------------------HhCCcEEE
Q 004760 244 KFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL---------------------ARRKIKVL 298 (732)
Q Consensus 244 kIllI~h~l----s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el---------------------~~~gI~v~ 298 (732)
||++|+++. ..||++.++.+||++|.+.||+|.|++....+ ....+ ...|++++
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPD-IRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHH-HHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccc-cccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 799999987 47999999999999999999999999964321 11111 02578876
Q ss_pred EcCC----------C-------------c------h---hhh----hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEE
Q 004760 299 EDRG----------E-------------P------S---FKT----SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVW 342 (732)
Q Consensus 299 ~~~~----------~-------------~------~---~~~----~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw 342 (732)
..+. . . . +.+ ..+||+||+|+... .++..++.....+ .++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~-~~~~~~~~~~~~~-~p~v~ 158 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHA-GLAPAYLAARGRP-AKSVF 158 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGG-TTHHHHHHHTTCS-SEEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccch-hHHHHHHhhccCC-CCEEE
Confidence 5421 0 0 0 111 26899999997443 2233333322333 44777
Q ss_pred EEeechhH------hH---------------------HHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCC-ccc
Q 004760 343 WIMENRRE------YF---------------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQP-AVV 394 (732)
Q Consensus 343 ~i~e~r~~------~~---------------------~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~-~~v 394 (732)
++|..... .+ ...+..+..++.++++|+..... ..+.. ++... .+.
T Consensus 159 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~----~~~~~--~~~~~~~~~ 232 (485)
T 2qzs_A 159 TVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE----ITEPQ--FAYGMEGLL 232 (485)
T ss_dssp EESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH----TTSHH--HHTTCHHHH
T ss_pred EecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHH----Hhccc--cCcchHHHH
Confidence 77653100 00 01122344588999999986442 10000 11100 000
Q ss_pred cccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCCHHHH
Q 004760 395 PLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 395 ~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG~d~L 461 (732)
..... ...+.+||||+|.+.|.+.... +.+...+..+|+++|+++ +.++|+++|++.+.||++.+
T Consensus 233 ~~~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~l 310 (485)
T 2qzs_A 233 QQRHR--EGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLV 310 (485)
T ss_dssp HHHHH--TTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHH
T ss_pred Hhhcc--CCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHH
Confidence 00000 0235899999999988764310 001113467899999986 67899999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
++|++.+.+. +
T Consensus 311 i~a~~~l~~~--~------------------------------------------------------------------- 321 (485)
T 2qzs_A 311 LEALPGLLEQ--G------------------------------------------------------------------- 321 (485)
T ss_dssp HHHHHHHHHT--T-------------------------------------------------------------------
T ss_pred HHHHHHHhhC--C-------------------------------------------------------------------
Confidence 9999998652 2
Q ss_pred ccccCCCCccccCCcccceeEEeccCch--hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEE-Eccchhh-H
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGK--QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTR-V 617 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~G~--~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~-f~G~~~d-v 617 (732)
.+++++|+|+ ..+.++.++ +.++ ++|. |+|+..+ +
T Consensus 322 ------------------~~l~ivG~g~~~~~~~l~~~~---------------------~~~~--~~v~~~~g~~~~~~ 360 (485)
T 2qzs_A 322 ------------------GQLALLGAGDPVLQEGFLAAA---------------------AEYP--GQVGVQIGYHEAFS 360 (485)
T ss_dssp ------------------CEEEEEEEECHHHHHHHHHHH---------------------HHST--TTEEEEESCCHHHH
T ss_pred ------------------cEEEEEeCCchHHHHHHHHHH---------------------HhCC--CcEEEeCCCCHHHH
Confidence 2577888875 233333333 2223 6785 8898754 5
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccC---------ceEEEECCCCCcHHHHHHHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHN---------VTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g---------~~Gll~~~~d~~~e~La~aL~ 688 (732)
..+|++||++|+||. .|+||++++||||||+|||+|+.||+.|++.++ .+|++++++|+ ++|+++|.
T Consensus 361 ~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~--~~la~~i~ 436 (485)
T 2qzs_A 361 HRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA--WSLLRAIR 436 (485)
T ss_dssp HHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSH--HHHHHHHH
T ss_pred HHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCH--HHHHHHHH
Confidence 899999999999998 999999999999999999999999999999998 89999999988 99999999
Q ss_pred HHh---cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 689 YLL---KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 689 ~LL---~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
.++ +|++.+++|++++++ +.|+|+.++++|.++|+++..
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhh
Confidence 999 799999999999874 689999999999999998865
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=293.76 Aligned_cols=340 Identities=17% Similarity=0.204 Sum_probs=247.6
Q ss_pred CCeEEEEeCCC--CCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCC-------------ch-
Q 004760 242 SRKFILIFHEL--SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGE-------------PS- 305 (732)
Q Consensus 242 ~~kIllI~h~l--s~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~-------------~~- 305 (732)
+.||++|++.. ..||++..+.+||++|.+.||+|.+++........+.+.....+++..+.. ..
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 99 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKV 99 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHHHH
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHHHH
Confidence 35899999875 349999999999999999999999999654432111111111122222110 01
Q ss_pred --hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH--hHHH----hhhhhccccEEEEecHHhHHHhh
Q 004760 306 --FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE--YFDR----AKLVLDRVKLLVFLSESQTKQWL 377 (732)
Q Consensus 306 --~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~--~~~~----~~~~l~r~~~li~vS~~~~~~~~ 377 (732)
+.+..+||+||+++.....+ .++.....+. ++++++|..... .... ....+.+++.++++|+.....
T Consensus 100 ~~~l~~~~~Dii~~~~~~~~~~--~~~~~~~~~~-~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-- 174 (406)
T 2gek_A 100 KKWIAEGDFDVLHIHEPNAPSL--SMLALQAAEG-PIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRW-- 174 (406)
T ss_dssp HHHHHHHCCSEEEEECCCSSSH--HHHHHHHEES-SEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHH--
T ss_pred HHHHHhcCCCEEEECCccchHH--HHHHHHhcCC-CEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHH--
Confidence 23366999999987654433 2222222233 467777653211 1111 113445689999999886443
Q ss_pred hHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecC-CCCC
Q 004760 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI-NPGK 456 (732)
Q Consensus 378 ~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri-~~~K 456 (732)
+. + .+.. ..+ +||||+|.+.|.+... ..+++.+.+.|+++|++ .+.|
T Consensus 175 --~~----~-~~~~-----------~~~-vi~~~v~~~~~~~~~~-------------~~~~~~~~~~i~~~G~~~~~~K 222 (406)
T 2gek_A 175 --QM----E-ALGS-----------DAV-EIPNGVDVASFADAPL-------------LDGYPREGRTVLFLGRYDEPRK 222 (406)
T ss_dssp --HH----H-HHSS-----------CEE-ECCCCBCHHHHHTCCC-------------CTTCSCSSCEEEEESCTTSGGG
T ss_pred --HH----H-hcCC-----------CcE-EecCCCChhhcCCCch-------------hhhccCCCeEEEEEeeeCcccc
Confidence 21 1 1111 135 8999998765543321 11233456789999999 9999
Q ss_pred CHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccC
Q 004760 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (732)
Q Consensus 457 G~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~ 536 (732)
|++.+++|+..+.++.++
T Consensus 223 g~~~li~a~~~l~~~~~~-------------------------------------------------------------- 240 (406)
T 2gek_A 223 GMAVLLAALPKLVARFPD-------------------------------------------------------------- 240 (406)
T ss_dssp CHHHHHHHHHHHHTTSTT--------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHCCC--------------------------------------------------------------
Confidence 999999999999776554
Q ss_pred CCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--
Q 004760 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT-- 614 (732)
Q Consensus 537 ~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~-- 614 (732)
.+++++|.|+. +.++.++. . +.++|.|+|++
T Consensus 241 -----------------------~~l~i~G~~~~-~~l~~~~~---------------------~--~~~~v~~~g~~~~ 273 (406)
T 2gek_A 241 -----------------------VEILIVGRGDE-DELREQAG---------------------D--LAGHLRFLGQVDD 273 (406)
T ss_dssp -----------------------CEEEEESCSCH-HHHHHHTG---------------------G--GGGGEEECCSCCH
T ss_pred -----------------------eEEEEEcCCcH-HHHHHHHH---------------------h--ccCcEEEEecCCH
Confidence 35778888876 55555542 1 25789999988
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~ 694 (732)
+++..+|+.||++|+||.+ .|+||++++|||+||+|||+++.||..|++.++.+|++++++|+ ++|+++|.++++|+
T Consensus 274 ~~~~~~~~~adv~v~ps~~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~--~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLG-GESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDA--DGMAAALIGILEDD 350 (406)
T ss_dssp HHHHHHHHHSSEEEECCCS-CCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCH--HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHCCEEEecCCC-CCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCH--HHHHHHHHHHHcCH
Confidence 5679999999999999842 89999999999999999999999999999999999999998888 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 695 SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 695 ~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+.+.+|++++++.++ .|+|+.+++++.++|++++..
T Consensus 351 ~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 351 QLRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999998 899999999999999998764
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=285.74 Aligned_cols=308 Identities=17% Similarity=0.139 Sum_probs=233.6
Q ss_pred ccCCeEEEEeCC--------------CCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch
Q 004760 240 VWSRKFILIFHE--------------LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS 305 (732)
Q Consensus 240 ~~~~kIllI~h~--------------ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~ 305 (732)
|.+.||++|++. ...||++..+.+||++|.+.||+|.+++....... ..+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-----~~~~~~~~~~~~~~ 75 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-----RPGLTVVPAGEPEE 75 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-----STTEEECSCCSHHH
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-----CCcceeccCCcHHH
Confidence 456799999998 25699999999999999999999999985443321 25666665443222
Q ss_pred ---hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHh
Q 004760 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 306 ---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
+.+..+||+||+++.....+ .....+.+ ++++|...... ...+.++++|+..... +
T Consensus 76 l~~~l~~~~~Dvi~~~~~~~~~~-----~~~~~~~p--v~~~h~~~~~~--------~~~d~ii~~S~~~~~~----~-- 134 (342)
T 2iuy_A 76 IERWLRTADVDVVHDHSGGVIGP-----AGLPPGTA--FISSHHFTTRP--------VNPVGCTYSSRAQRAH----C-- 134 (342)
T ss_dssp HHHHHHHCCCSEEEECSSSSSCS-----TTCCTTCE--EEEEECSSSBC--------SCCTTEEESCHHHHHH----T--
T ss_pred HHHHHHhcCCCEEEECCchhhHH-----HHhhcCCC--EEEecCCCCCc--------ccceEEEEcCHHHHHH----H--
Confidence 33467999999997553221 12233445 66776543211 1166799999986442 2
Q ss_pred hhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHH
Q 004760 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLV 462 (732)
Q Consensus 383 e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LL 462 (732)
.. . .+. .+||||+|.+.|.+... .. .++..|+++|++.+.||++.++
T Consensus 135 ---~~---~-------~~~----~vi~ngvd~~~~~~~~~---------------~~-~~~~~i~~vG~~~~~Kg~~~li 181 (342)
T 2iuy_A 135 ---GG---G-------DDA----PVIPIPVDPARYRSAAD---------------QV-AKEDFLLFMGRVSPHKGALEAA 181 (342)
T ss_dssp ---TC---C-------TTS----CBCCCCBCGGGSCCSTT---------------CC-CCCSCEEEESCCCGGGTHHHHH
T ss_pred ---hc---C-------Cce----EEEcCCCChhhcCcccc---------------cC-CCCCEEEEEeccccccCHHHHH
Confidence 11 1 222 79999999988865432 11 2445799999999999999999
Q ss_pred HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcc
Q 004760 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (732)
Q Consensus 463 eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf 542 (732)
+|++.+ +
T Consensus 182 ~a~~~~-----~-------------------------------------------------------------------- 188 (342)
T 2iuy_A 182 AFAHAC-----G-------------------------------------------------------------------- 188 (342)
T ss_dssp HHHHHH-----T--------------------------------------------------------------------
T ss_pred HHHHhc-----C--------------------------------------------------------------------
Confidence 999876 2
Q ss_pred cccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchh--hHHHH
Q 004760 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT--RVASL 620 (732)
Q Consensus 543 ~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~--dv~~l 620 (732)
.+++++|+|+..+.++.++. .++ ++|+|+|+++ ++.++
T Consensus 189 -----------------~~l~i~G~g~~~~~l~~~~~---------------------~~~--~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 189 -----------------RRLVLAGPAWEPEYFDEITR---------------------RYG--STVEPIGEVGGERRLDL 228 (342)
T ss_dssp -----------------CCEEEESCCCCHHHHHHHHH---------------------HHT--TTEEECCCCCHHHHHHH
T ss_pred -----------------cEEEEEeCcccHHHHHHHHH---------------------HhC--CCEEEeccCCHHHHHHH
Confidence 14677888876555554442 124 6899999884 56999
Q ss_pred HHHcCEEEEccC---------CCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCCCCcHHHHHHHHHH
Q 004760 621 YSAADVYVINSQ---------GLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 621 ysaADv~V~pS~---------~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
|++||++|+||. + .|+||++++||||||+|||+|+.||+.|++++ +.+|+++++ |. ++|+++|.+
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~-~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~--~~l~~~i~~ 304 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIW-CEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-AP--DEARRTLAG 304 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCC-CCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CH--HHHHHHHHT
T ss_pred HHhCCEEEECCccccccccccc-ccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CH--HHHHHHHHH
Confidence 999999999996 3 79999999999999999999999999999999 899999998 87 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcC
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMKP 731 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~~ 731 (732)
+++ ++++++.+.++|+|+.+++++.++|++++..
T Consensus 305 l~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 305 LPA--------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp SCC--------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred HHH--------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 987 6678888888899999999999999998764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.2e-31 Score=300.48 Aligned_cols=211 Identities=18% Similarity=0.247 Sum_probs=163.9
Q ss_pred eEEeecCCCCCCCCCchh------------hHHHhHHhHHHHHHHhCCCC--CCEEEEEEecCCCCCCHHHHHHHHHHhH
Q 004760 404 FVAGFTCSLNTPTSSPEK------------MREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLLVESAQLMI 469 (732)
Q Consensus 404 ~v~vIpngvd~~~f~~~~------------~~ekr~~~r~~~R~~lgl~~--~~~lil~vGri~~~KG~d~LLeA~~~l~ 469 (732)
.+.+|+||+|++.|.|.. ..+.+...+..+++++|++. +.++|+++||+.++||++.|++|+..+.
T Consensus 274 ~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~ 353 (536)
T 3vue_A 274 GITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELM 353 (536)
T ss_dssp SCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHT
T ss_pred CeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhH
Confidence 458999999999988742 12233446678899999864 5689999999999999999999999885
Q ss_pred HhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCC
Q 004760 470 EQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTD 549 (732)
Q Consensus 470 ~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d 549 (732)
++.
T Consensus 354 ~~~----------------------------------------------------------------------------- 356 (536)
T 3vue_A 354 QED----------------------------------------------------------------------------- 356 (536)
T ss_dssp TSS-----------------------------------------------------------------------------
T ss_pred hhC-----------------------------------------------------------------------------
Confidence 432
Q ss_pred ccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEE
Q 004760 550 AVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVY 627 (732)
Q Consensus 550 ~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~ 627 (732)
.+++++|.|+...... ++.+.. ++..+|.+.+.. +++..+|++||+|
T Consensus 357 ----------~~l~l~G~G~~~~~~~-------------------~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~aD~~ 405 (536)
T 3vue_A 357 ----------VQIVLLGTGKKKFEKL-------------------LKSMEE--KYPGKVRAVVKFNAPLAHLIMAGADVL 405 (536)
T ss_dssp ----------CEEEEECCBCHHHHHH-------------------HHHHHH--HSTTTEEEECSCCHHHHHHHHHHCSEE
T ss_pred ----------CeEEEEeccCchHHHH-------------------HHHHHh--hcCCceEEEEeccHHHHHHHHHhhhee
Confidence 2456667664322111 111112 334677777644 6788999999999
Q ss_pred EEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEE----------CCCCCcHHHHHHHHHHHhc--CHH
Q 004760 628 VINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLH----------PPGHPGAQVLAQNLRYLLK--NPS 695 (732)
Q Consensus 628 V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~----------~~~d~~~e~La~aL~~LL~--n~~ 695 (732)
|+||. .|+||++++|||+||+|||+|++||++|+|.++.+|+.+ ++.|+ ++|+++|.++++ +..
T Consensus 406 v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~--~~la~ai~ral~~~~~~ 481 (536)
T 3vue_A 406 AVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDV--KKVAATLKRAIKVVGTP 481 (536)
T ss_dssp EECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHH--HHHHHHHHHHHHHTTSH
T ss_pred ecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCH--HHHHHHHHHHHHhcCcH
Confidence 99998 999999999999999999999999999999999999954 44444 999999988765 445
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 696 VRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 696 ~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.+++|++++. ++.|||++++++|.++|+++.
T Consensus 482 ~~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 482 AYEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH---HhcCCHHHHHHHHHHHHHHhh
Confidence 5777777664 467999999999999999864
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=306.80 Aligned_cols=421 Identities=13% Similarity=0.171 Sum_probs=267.4
Q ss_pred ceeeccCCcchhhhcccCc-----ccccccccccchhhhhccCCeEEEEeCCCC-----------CCcHHHHHH------
Q 004760 205 GLLVGPFGLTEDRILEWSP-----EKRSGTCDRKGDFARFVWSRKFILIFHELS-----------MTGAPLSMM------ 262 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~kIllI~h~ls-----------~gGA~~~~~------ 262 (732)
|+--| +|.+-.|++|.=- -+.-..|.=..=+++.=+..+|++|+.-.. .||-...++
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al 315 (816)
T 3s28_A 237 GLERG-WGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRAL 315 (816)
T ss_dssp TBCBC-SCSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHH
T ss_pred CCCCC-cCCcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHH
Confidence 44444 6666666665310 001112222333445556788999986553 566688888
Q ss_pred --HHHHHHHHCCCEEE----EEEeCCCCC----ChhH---HH-hCCcEEEEcCCCch-------------------hh--
Q 004760 263 --ELATELLSCGATVS----AVVLSKRGG----LMPE---LA-RRKIKVLEDRGEPS-------------------FK-- 307 (732)
Q Consensus 263 --eLA~~L~~~G~~V~----vv~l~~~g~----l~~e---l~-~~gI~v~~~~~~~~-------------------~~-- 307 (732)
+||++|+++||+|+ ++|-.-... +.+. +. ..|+.|+..+.... |.
T Consensus 316 ~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~ 395 (816)
T 3s28_A 316 EIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTED 395 (816)
T ss_dssp HHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHH
Confidence 57778888999886 666332111 1111 11 24778876653320 11
Q ss_pred ------h--hcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhH----------hHH----------Hhhhhh
Q 004760 308 ------T--SMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE----------YFD----------RAKLVL 359 (732)
Q Consensus 308 ------~--~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~----------~~~----------~~~~~l 359 (732)
. ..+||+||+|.... .++ ..+.....+.+ +++.+|..... .+. .....+
T Consensus 396 ~l~~il~~~~~~PDVIHsH~~~s-glv-a~llar~~gvP-~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l 472 (816)
T 3s28_A 396 AAVELSKELNGKPDLIIGNYSDG-NLV-ASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAM 472 (816)
T ss_dssp HHHHHHHHCSSCCSEEEEEHHHH-HHH-HHHHHHHHTCC-EEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEeCCchH-HHH-HHHHHHHcCCC-EEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 1 34799999885332 222 22333334555 55666532110 000 011245
Q ss_pred ccccEEEEecHHhHHHhhhHHHhhhhhccC-CCc--cccccCCCccceEEeecCCCCCCCCCchhhHHHh-HHhH-----
Q 004760 360 DRVKLLVFLSESQTKQWLTWCEEEKLKLRS-QPA--VVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKR-NLLR----- 430 (732)
Q Consensus 360 ~r~~~li~vS~~~~~~~~~~~~~e~i~l~~-~~~--~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr-~~~r----- 430 (732)
..++.++++|+.....-...+.......+. .|. .+.-+.+.....+.+||||+|...|.|....+++ ....
T Consensus 473 ~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~ 552 (816)
T 3s28_A 473 NHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE 552 (816)
T ss_dssp HHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHH
T ss_pred HhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccc
Confidence 668999999988643100000000000000 000 0000000011156999999999999876432210 0000
Q ss_pred -----HHHHHHhCC--CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccc
Q 004760 431 -----DSVRKEMGL--TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRG 503 (732)
Q Consensus 431 -----~~~R~~lgl--~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ 503 (732)
...++.+|+ +.+.++|+++|++.+.||++.+++|+..+.+..++
T Consensus 553 ~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~----------------------------- 603 (816)
T 3s28_A 553 LLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL----------------------------- 603 (816)
T ss_dssp HHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH-----------------------------
T ss_pred cccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC-----------------------------
Confidence 123456677 67788999999999999999999999998765443
Q ss_pred cccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCC
Q 004760 504 LLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGS 583 (732)
Q Consensus 504 ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~ 583 (732)
.+++++|+|+.... .
T Consensus 604 --------------------------------------------------------v~LvIvG~g~~~~~---------~ 618 (816)
T 3s28_A 604 --------------------------------------------------------ANLVVVGGDRRKES---------K 618 (816)
T ss_dssp --------------------------------------------------------CEEEEECCCTTSCC---------C
T ss_pred --------------------------------------------------------eEEEEEeCCCcccc---------c
Confidence 35777888762000 0
Q ss_pred CCCChhhHHHHHHHHHhcCCCCCcEEEccch------hhHHHHHH-HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC
Q 004760 584 KSNKVPYVKEILEFLSQHSNLSKAMLWTPAT------TRVASLYS-AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656 (732)
Q Consensus 584 ~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~------~dv~~lys-aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td 656 (732)
...+..+..++. .+.+.+++.++|.|+|++ +++..+|+ +||++|+||. .|+||++++||||||+|||+|+
T Consensus 619 ~~e~~~~~~~L~-~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd 695 (816)
T 3s28_A 619 DNEEKAEMKKMY-DLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATC 695 (816)
T ss_dssp CHHHHHHHHHHH-HHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEES
T ss_pred chhhHHHHHHHH-HHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeC
Confidence 000011223333 333445899999999953 56888888 6899999998 9999999999999999999999
Q ss_pred CCChhhhhccCceEEEECCCCCcHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 657 AGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLL----KNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 657 ~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL----~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
.||+.|++.++.+|++++++|+ ++|+++|..++ .|++.+++|++++++.+.++|+|+.+++++.++|+..
T Consensus 696 ~GG~~EiV~dg~~Gllv~p~D~--e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 696 KGGPAEIIVHGKSGFHIDPYHG--DQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp SBTHHHHCCBTTTBEEECTTSH--HHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHccCCcEEEeCCCCH--HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999988 99999997766 8999999999999999988999999999999999865
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=267.96 Aligned_cols=332 Identities=12% Similarity=0.094 Sum_probs=210.8
Q ss_pred CeEEEEeCCCCCC---cHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHh-CCcEEEEcCCC--------------c
Q 004760 243 RKFILIFHELSMT---GAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDRGE--------------P 304 (732)
Q Consensus 243 ~kIllI~h~ls~g---GA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~-~gI~v~~~~~~--------------~ 304 (732)
.||+++++.+..+ |+...+.+||++|.++||+|.|++...... .+...+ .+......... .
T Consensus 47 mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 125 (413)
T 2x0d_A 47 KRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKDLQSFKSFKYVMPEEDKDFALQIVPFNDRYN 125 (413)
T ss_dssp CEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHHHGGGTTSEECCTTCCCCCSEEEEECSCCTT
T ss_pred ceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHHHHhhhccceeeccCCccccceeeecccccc
Confidence 7999999999864 777889999999999999999999643221 111111 12222111100 0
Q ss_pred hhhhhcCccEEEeCCchhhHHHHHHH---Hh-hcCCCccEEEEEeechhHhH------HHhhhhhcccc--EEEEecHHh
Q 004760 305 SFKTSMKADLVIAGSAVCATWIDQYI---TR-FPAGGSQVVWWIMENRREYF------DRAKLVLDRVK--LLVFLSESQ 372 (732)
Q Consensus 305 ~~~~~~k~DlVia~Sav~~~~i~~~i---~~-~~~~~~~ivw~i~e~r~~~~------~~~~~~l~r~~--~li~vS~~~ 372 (732)
......++|+||+++...+....... .+ ......+.++.++.....+. ......+.... .+++.|+..
T Consensus 126 ~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~~ 205 (413)
T 2x0d_A 126 RTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELL 205 (413)
T ss_dssp CCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHHH
T ss_pred ccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHHH
Confidence 00113479999988633222111111 01 11112234554433211111 01112222222 477888886
Q ss_pred HHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecC
Q 004760 373 TKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI 452 (732)
Q Consensus 373 ~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri 452 (732)
... . .+.++.. . .+.+||||+|.+.|.+.. .+ ..++..++++||+
T Consensus 206 ~~~----l----~~~g~~~-------~----~~~~i~~g~d~~~~~~~~---------------~~-~~~~~~il~~gr~ 250 (413)
T 2x0d_A 206 KQY----F----NNKGYNF-------T----DEYFFQPKINTTLKNYIN---------------DK-RQKEKIILVYGRP 250 (413)
T ss_dssp HHH----H----HHHTCCC-------S----EEEEECCCCCHHHHTTTT---------------SC-CCCCSEEEEEECT
T ss_pred HHH----H----HHcCCCC-------C----ceEEeCCCcCchhhcccc---------------cc-cCCCCEEEEEecC
Confidence 442 2 1123321 1 247899999865432210 11 2344577889996
Q ss_pred -CCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 453 -NPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 453 -~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
.+.||++.+|+|++.+.++.|+.
T Consensus 251 ~~~~Kg~~~li~A~~~l~~~~~~~-------------------------------------------------------- 274 (413)
T 2x0d_A 251 SVKRNAFTLIVEALKIFVQKYDRS-------------------------------------------------------- 274 (413)
T ss_dssp TCGGGCHHHHHHHHHHHHHHCTTG--------------------------------------------------------
T ss_pred chhccCHHHHHHHHHHHHHhCCCC--------------------------------------------------------
Confidence 68999999999999998776530
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~ 611 (732)
...+++++|+|+... .+++.++|+|+
T Consensus 275 --------------------------~~~~l~ivG~~~~~~----------------------------~l~~~~~v~f~ 300 (413)
T 2x0d_A 275 --------------------------NEWKIISVGEKHKDI----------------------------ALGKGIHLNSL 300 (413)
T ss_dssp --------------------------GGCEEEEEESCCCCE----------------------------EEETTEEEEEE
T ss_pred --------------------------CceEEEEEcCCchhh----------------------------hcCCcCcEEEc
Confidence 013577778775431 12556789999
Q ss_pred cch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 612 PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 612 G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
|++ +++..+|++||+||+||. .|+||++++||||||+|||++ .+|..|+++++.+|++++++|+ ++||++|..
T Consensus 301 G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~--~~la~ai~~ 375 (413)
T 2x0d_A 301 GKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNP--ENIAETLVE 375 (413)
T ss_dssp ESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSH--HHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCH--HHHHHHHHH
Confidence 975 799999999999999997 899999999999999999995 4667899999999999999998 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+++|++.+++ ++++.++ .|+|+.+.++ .+.|+++..
T Consensus 376 ll~~~~~~~~---~~~~~~~-~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 376 LCMSFNNRDV---DKKESSN-MMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp HHHHTC----------CCBS-CGGGCCCC----TTHHHHHT
T ss_pred HHcCHHHHHH---hHHHHHH-hCCHHHHHHH-HHHHHHHHh
Confidence 9999988777 5665554 6999999877 666666543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=272.56 Aligned_cols=328 Identities=11% Similarity=0.077 Sum_probs=230.1
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHH--HHHCCCEEEEEEeCCC--CCChhHHHhCCcEEEEcCCCch-----hhhhcCc
Q 004760 242 SRKFILIFHELSMTGAPLSMMELATE--LLSCGATVSAVVLSKR--GGLMPELARRKIKVLEDRGEPS-----FKTSMKA 312 (732)
Q Consensus 242 ~~kIllI~h~ls~gGA~~~~~eLA~~--L~~~G~~V~vv~l~~~--g~l~~el~~~gI~v~~~~~~~~-----~~~~~k~ 312 (732)
+.||+++++.+..+|++..+++|++. |.+.|++|.+++.... +.+..++...+ .+........ +.++.+|
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~ 283 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTALGHLATAKHIRHHGI 283 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTTCCHHHHHHHHHHTTC
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCCCCHHHHHHHHHhCCC
Confidence 46899999999999999999999999 7889999999985432 33455666666 6554433211 3447899
Q ss_pred cEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCc
Q 004760 313 DLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPA 392 (732)
Q Consensus 313 DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~ 392 (732)
|+||.++..........+++... + +++..+..... ..+...+..+ +. ..++.++.... +
T Consensus 284 Div~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~------~~~~~~~~~~--~d------~~i~~s~~~~~-~--- 342 (568)
T 2vsy_A 284 DLLFDLRGWGGGGRPEVFALRPA--P-VQVNWLAYPGT------SGAPWMDYVL--GD------AFALPPALEPF-Y--- 342 (568)
T ss_dssp SEEEECSSCTTCSSCHHHHTCCS--S-EEEEESSSSSC------CCCTTCCEEE--EC------TTTSCTTTGGG-C---
T ss_pred CEEEECCCCCCcchHHHHhcCCC--c-eeEeeecCCcc------cCCCCceEEE--EC------CCcCCcccccC-C---
Confidence 99997653322111122232222 2 22222110000 0011111111 10 11121111110 0
Q ss_pred cccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhC
Q 004760 393 VVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQE 472 (732)
Q Consensus 393 ~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~ 472 (732)
...+.+|||.+......+... +...|+++|++++.+ ++++|++.+ ||++.+++|+..+.++.
T Consensus 343 ---------~~~i~~ipn~~~~~~~~~~~~-------~~~~r~~~~~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~~~~ 404 (568)
T 2vsy_A 343 ---------SEHVLRLQGAFQPSDTSRVVA-------EPPSRTQCGLPEQGV-VLCCFNNSY-KLNPQSMARMLAVLREV 404 (568)
T ss_dssp ---------SSEEEECSSCSCCCCTTCCCC-------CCCCTGGGTCCTTSC-EEEECCCGG-GCCHHHHHHHHHHHHHC
T ss_pred ---------cceeEcCCCcCCCCCCCCCCC-------CCCCccccCCCCCCE-EEEeCCccc-cCCHHHHHHHHHHHHhC
Confidence 124588998654432211111 022467889987764 559999999 99999999999998877
Q ss_pred CCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccc
Q 004760 473 PSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVS 552 (732)
Q Consensus 473 p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~ 552 (732)
|+
T Consensus 405 ~~------------------------------------------------------------------------------ 406 (568)
T 2vsy_A 405 PD------------------------------------------------------------------------------ 406 (568)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 65
Q ss_pred cCCcccceeEEecc-CchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC-CcEEEccch--hhHHHHHHHcCEEE
Q 004760 553 FGSGHLRRKVLSKS-DGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS-KAMLWTPAT--TRVASLYSAADVYV 628 (732)
Q Consensus 553 iG~~~~~~~LlivG-~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~-~~V~f~G~~--~dv~~lysaADv~V 628 (732)
.+++++| +|+..+.++.++. .+++. ++|+|+|++ +++..+|+.||+||
T Consensus 407 -------~~l~i~G~~g~~~~~l~~~~~---------------------~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v 458 (568)
T 2vsy_A 407 -------SVLWLLSGPGEADARLRAFAH---------------------AQGVDAQRLVFMPKLPHPQYLARYRHADLFL 458 (568)
T ss_dssp -------CEEEEECCSTTHHHHHHHHHH---------------------HTTCCGGGEEEECCCCHHHHHHHGGGCSEEE
T ss_pred -------cEEEEecCCHHHHHHHHHHHH---------------------HcCCChhHEEeeCCCCHHHHHHHHhcCCEEe
Confidence 2577888 7777666665553 33787 899999988 58999999999999
Q ss_pred EccCCCCCCCcHHHHHHHHcCCCEEE-------cCCC-------ChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCH
Q 004760 629 INSQGLGETFGRVTIEAMAFGVPVLG-------TDAG-------GTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNP 694 (732)
Q Consensus 629 ~pS~~~~Egfg~vilEAMA~GlPVI~-------td~g-------G~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~ 694 (732)
+||. . +||++++|||+||+|||+ |+.| |+.|+|.+ |+ ++++++|..+++|+
T Consensus 459 ~ps~--~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~--~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 459 DTHP--Y-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------DD--AAFVAKAVALASDP 523 (568)
T ss_dssp CCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SH--HHHHHHHHHHHHCH
T ss_pred eCCC--C-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------CH--HHHHHHHHHHhcCH
Confidence 9998 7 999999999999999999 9999 99998865 44 99999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHhhc
Q 004760 695 SVRERMAMEGRKKV--ERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 695 ~~r~~m~~~~r~~v--~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.+++|++++++.+ .+.|+|+.+++++.++|++++.
T Consensus 524 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 524 AALTALHARVDVLRRASGVFHMDGFADDFGALLQALAR 561 (568)
T ss_dssp HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999998 6789999999999999998875
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=244.47 Aligned_cols=318 Identities=13% Similarity=0.050 Sum_probs=221.5
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCc--------------h---
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP--------------S--- 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~--------------~--- 305 (732)
.||++++ .+.||....+++||++|.+.||+|.+++... +.....+...|++++..+... .
T Consensus 7 mkIl~~~--~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (364)
T 1f0k_A 7 KRLMVMA--GGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD-RMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN 83 (364)
T ss_dssp CEEEEEC--CSSHHHHHHHHHHHHHHHTTTCEEEEEECTT-STHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred cEEEEEe--CCCccchhHHHHHHHHHHHcCCEEEEEecCC-cchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHH
Confidence 6899997 4457999999999999999999999998433 322234555699887665421 0
Q ss_pred -------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhh
Q 004760 306 -------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (732)
Q Consensus 306 -------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~ 378 (732)
+.++.+||+||+++.... +...+.....+.+ ++++.|.....+..+ ......+.++..++..
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~--~~~~~~~~~~~~p-~v~~~~~~~~~~~~~--~~~~~~d~v~~~~~~~------ 152 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVS--GPGGLAAWSLGIP-VVLHEQNGIAGLTNK--WLAKIATKVMQAFPGA------ 152 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTH--HHHHHHHHHTTCC-EEEEECSSSCCHHHH--HHTTTCSEEEESSTTS------
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCc--hHHHHHHHHcCCC-EEEEecCCCCcHHHH--HHHHhCCEEEecChhh------
Confidence 123569999999865422 1233333444555 444443321111111 1112244444432210
Q ss_pred HHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCE-EEEEEecCCCCCC
Q 004760 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDM-LVLSLSSINPGKG 457 (732)
Q Consensus 379 ~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~-lil~vGri~~~KG 457 (732)
. . .+.+|+||++...+.+.. .+++++++.++. +++++|++.+.|+
T Consensus 153 ----------~---------~----~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 153 ----------F---------P----NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ----------S---------S----SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHH
T ss_pred ----------c---------C----CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHH
Confidence 0 0 136899999876554322 135677776666 4556679999999
Q ss_pred HHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 458 ~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
++.+++|+..+.+ +
T Consensus 199 ~~~li~a~~~l~~---~--------------------------------------------------------------- 212 (364)
T 1f0k_A 199 NQTMPQVAAKLGD---S--------------------------------------------------------------- 212 (364)
T ss_dssp HHHHHHHHHHHGG---G---------------------------------------------------------------
T ss_pred HHHHHHHHHHhcC---C---------------------------------------------------------------
Confidence 9999999998732 1
Q ss_pred CCCcccccCCCCccccCCccccee-EEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhh
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRK-VLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR 616 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~-LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~d 616 (732)
.+ ++++|.|+. +.++.++. .+++ ++|.|+|++++
T Consensus 213 ----------------------~~~l~i~G~~~~-~~l~~~~~---------------------~~~~-~~v~~~g~~~~ 247 (364)
T 1f0k_A 213 ----------------------VTIWHQSGKGSQ-QSVEQAYA---------------------EAGQ-PQHKVTEFIDD 247 (364)
T ss_dssp ----------------------EEEEEECCTTCH-HHHHHHHH---------------------HTTC-TTSEEESCCSC
T ss_pred ----------------------cEEEEEcCCchH-HHHHHHHh---------------------hcCC-CceEEecchhh
Confidence 12 456777762 33433332 2255 47999999999
Q ss_pred HHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChh--------hhhccCceEEEECCCCCcHHHHHHHHH
Q 004760 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTK--------EIVEHNVTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 617 v~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~--------EiVe~g~~Gll~~~~d~~~e~La~aL~ 688 (732)
+..+|+.||++|+|| . |++++|||+||+|||+++.+|.. ++++++ .|++++++|.++++|+++|.
T Consensus 248 ~~~~~~~ad~~v~~s---g---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~ 320 (364)
T 1f0k_A 248 MAAAYAWADVVVCRS---G---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLA 320 (364)
T ss_dssp HHHHHHHCSEEEECC---C---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHH
T ss_pred HHHHHHhCCEEEECC---c---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHH
Confidence 999999999999999 3 99999999999999999998754 566665 59999988733499999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 689 ~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
.+ |++.+++|++++++.++ .|+|+.+++++.++|++..
T Consensus 321 ~l--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 321 GW--SRETLLTMAERARAASI-PDATERVANEVSRVARALE 358 (364)
T ss_dssp TC--CHHHHHHHHHHHHHTCC-TTHHHHHHHHHHHHHTTC-
T ss_pred hc--CHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999998875 6999999999999997643
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=218.37 Aligned_cols=189 Identities=20% Similarity=0.287 Sum_probs=154.7
Q ss_pred eecCCCCCCCCC--chhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhH--HhCCCCchhhhh
Q 004760 407 GFTCSLNTPTSS--PEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMI--EQEPSMDDSKIR 481 (732)
Q Consensus 407 vIpngvd~~~f~--~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~-~~KG~d~LLeA~~~l~--~~~p~~~~~~~~ 481 (732)
+||||+|...|. +..... ...+..+|+++|++++ .+|+++|++. +.||++.+++|+..+. ++.++
T Consensus 1 gipngvd~~~f~~~~~~~~~--~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~------- 70 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGSR--DERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE------- 70 (200)
T ss_dssp ----CCCTTTSSGGGSCSCH--HHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG-------
T ss_pred CCCCccChhhccccccccch--hhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhccCCC-------
Confidence 589999999998 654100 0012678999999755 4899999999 9999999999999985 44333
Q ss_pred hccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCccccee
Q 004760 482 KSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRK 561 (732)
Q Consensus 482 ~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~ 561 (732)
.+
T Consensus 71 ------------------------------------------------------------------------------~~ 72 (200)
T 2bfw_A 71 ------------------------------------------------------------------------------MR 72 (200)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------eE
Confidence 36
Q ss_pred EEeccCch--hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEE-ccchh--hHHHHHHHcCEEEEccCCCCC
Q 004760 562 VLSKSDGK--QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW-TPATT--RVASLYSAADVYVINSQGLGE 636 (732)
Q Consensus 562 LlivG~G~--~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f-~G~~~--dv~~lysaADv~V~pS~~~~E 636 (732)
++++|.|+ ....++.++. .++ +|+| +|+++ ++..+|+.||++|+||. .|
T Consensus 73 l~i~G~~~~~~~~~l~~~~~---------------------~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e 126 (200)
T 2bfw_A 73 FIIIGKGDPELEGWARSLEE---------------------KHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FE 126 (200)
T ss_dssp EEEECCBCHHHHHHHHHHHH---------------------HCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CC
T ss_pred EEEECCCChHHHHHHHHHHH---------------------hcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CC
Confidence 77888876 4444444332 223 8999 99885 99999999999999998 89
Q ss_pred CCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcC
Q 004760 637 TFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYL 713 (732)
Q Consensus 637 gfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys 713 (732)
+||++++|||+||+|||+++.++..|++ ++.+|++++++|+ ++++++|..+++ |++.+++|++++++.+++ ||
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~--~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDP--GELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred CccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999999999999999999999 8889999998888 999999999999 999999999999999987 76
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=259.34 Aligned_cols=384 Identities=13% Similarity=0.106 Sum_probs=237.8
Q ss_pred cCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-hHh---------HH---------------------Hhhhh
Q 004760 310 MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-REY---------FD---------------------RAKLV 358 (732)
Q Consensus 310 ~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r-~~~---------~~---------------------~~~~~ 358 (732)
.+||++|+|--.++. ...++.... ...+.++.||... .++ +. ..+..
T Consensus 180 ~~pdIiH~HDW~tg~-~~~~Lk~~~-~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKag 257 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGV-ALPLCRKRR-IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAA 257 (725)
T ss_dssp SEEEEEEEESGGGCT-HHHHHHHTT-CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhH-HHHHHHHhC-CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHH
Confidence 569999888644432 223443332 2345788888652 001 10 01112
Q ss_pred hccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhh-HHHhHHhHHHH----
Q 004760 359 LDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKM-REKRNLLRDSV---- 433 (732)
Q Consensus 359 l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~-~ekr~~~r~~~---- 433 (732)
...++.++++|+..+.. +. .-++.++ + .+||||+|+..|.|... ..++...|..+
T Consensus 258 a~~AD~ITTVS~~yA~E----i~---~Ll~r~~--------d-----~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l 317 (725)
T 3nb0_A 258 AHSADVFTTVSQITAFE----AE---HLLKRKP--------D-----GILPNGLNVIKFQAFHEFQNLHALKKEKINDFV 317 (725)
T ss_dssp HHHSSEEEESSHHHHHH----HH---HHTSSCC--------S-----EECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEECCHHHHHH----HH---HHhcCCC--------C-----EEEcCCccccccCcchhhHHHHHHHHHHHHHHH
Confidence 22389999999997543 21 1123333 2 34999999999988521 11222233333
Q ss_pred HHH----hCCCCCC-EEEEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccc
Q 004760 434 RKE----MGLTDQD-MLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQM 507 (732)
Q Consensus 434 R~~----lgl~~~~-~lil~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~ 507 (732)
|+. ++++.++ ++|+.+||+. .+||+|++++|+.+|.......+.++...+++|.++.++-+..-.|+|+++.++
T Consensus 318 ~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~ 397 (725)
T 3nb0_A 318 RGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRA 397 (725)
T ss_dssp HHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHH
T ss_pred HhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHH
Confidence 332 3565344 5566689999 789999999999999876332233567788899999999888888999999988
Q ss_pred cccccCcccccccchhhhhccCCcccc-cCCCC-CcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCC
Q 004760 508 SDDVGLSSNELSVSSESFTQLNEPVRK-NLLSP-SLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKS 585 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~P~~~-n~~~p-~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~ 585 (732)
+.++...+-.-+.-+-+...+++|... ....| ++-.-++..|.+.+ ++.++...-.. ..+..++.+.-...
T Consensus 398 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~l------kr~~~~~~~~~-~~lpp~~TH~~~~~ 470 (725)
T 3nb0_A 398 LENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVML------KRRILALRRPE-GQLPPIVTHNMVDD 470 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHH------HHHHHHHCCCT-TCCCCSBSEEETTG
T ss_pred HHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHH------HHHHHhhccCC-CCCCCeeeeecccC
Confidence 888887766666666677767777411 11112 21111111111100 00000000000 00111111111111
Q ss_pred CChhhHHHHHHHHHhcCCCCCc------EEEcc-ch--------hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC
Q 004760 586 NKVPYVKEILEFLSQHSNLSKA------MLWTP-AT--------TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV 650 (732)
Q Consensus 586 ~~~~y~k~il~~l~~~l~l~~~------V~f~G-~~--------~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl 650 (732)
..++ ++..+.+. ++.+. |+|++ +. .++..+|++||+||+||. +|+||++++||||||+
T Consensus 471 ~~D~----Il~~~r~l-~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~ 543 (725)
T 3nb0_A 471 ANDL----ILNKIRQV-QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGV 543 (725)
T ss_dssp GGCH----HHHHHHHH-TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTC
T ss_pred CccH----HHHHHHhc-CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCC
Confidence 1222 33333222 44333 67775 22 269999999999999998 9999999999999999
Q ss_pred CEEEcCCCChhhhhccC-------ceEEEECCC---CC--cHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHH
Q 004760 651 PVLGTDAGGTKEIVEHN-------VTGLLHPPG---HP--GAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHM 717 (732)
Q Consensus 651 PVI~td~gG~~EiVe~g-------~~Gll~~~~---d~--~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~ 717 (732)
|||+|+.||+.|+|.++ .+|+++++. ++ .+++|+++|..+++ ++..+.+|+.++++.++ .|+|+++
T Consensus 544 PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~i 622 (725)
T 3nb0_A 544 PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRM 622 (725)
T ss_dssp CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHH
T ss_pred CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHH
Confidence 99999999999999875 369888542 32 12445555555544 77888999999887765 6999999
Q ss_pred HHHHHHHHHHhhc
Q 004760 718 YKKLSQVIYKCMK 730 (732)
Q Consensus 718 ~~~~~ev~~~~l~ 730 (732)
+++|+++|+.++.
T Consensus 623 A~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 623 GLEYVKARQLALR 635 (725)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999874
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=230.99 Aligned_cols=342 Identities=13% Similarity=0.080 Sum_probs=218.2
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHCCC-EEEEEEeCCCCCChh-HHHhCCcEE-EEcCCCc--------h------
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSCGA-TVSAVVLSKRGGLMP-ELARRKIKV-LEDRGEP--------S------ 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~-~V~vv~l~~~g~l~~-el~~~gI~v-~~~~~~~--------~------ 305 (732)
.||++++.+. ..-..+..|+++|.+.|+ ++.+++....+.+.. .+...++.+ +...... .
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 3688887653 223446789999999994 888877544433333 334456644 3333210 0
Q ss_pred ---hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-----hHhHHHh-hhhhc-cccEEEEecHHhHHH
Q 004760 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-----REYFDRA-KLVLD-RVKLLVFLSESQTKQ 375 (732)
Q Consensus 306 ---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r-----~~~~~~~-~~~l~-r~~~li~vS~~~~~~ 375 (732)
+.++.+||+||+++.....|. ..+.....+.+ ++++.+... ..+.... ...+. .++.++++|+.....
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~-~~~~a~~~~ip-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 155 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLA-TSLAAFYQRIP-VGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQN 155 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHH-HHHHHHTTTCC-EEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEESSHHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCchHHHH-HHHHHHHHCCC-EEEEecccccccccCCCchHhhHHHHHhhccEEEcCcHHHHHH
Confidence 233679999999864233333 23334444555 555544211 0111111 12223 378899999886432
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCC-CCCCCCchhhHHHhHHhHHHHHHHhC-CCC-CCEEEEEEecC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSL-NTPTSSPEKMREKRNLLRDSVRKEMG-LTD-QDMLVLSLSSI 452 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngv-d~~~f~~~~~~ekr~~~r~~~R~~lg-l~~-~~~lil~vGri 452 (732)
+ ...+..+ ..+.+++|++ |...+.+... ......+..+++++| ++. +.++++++|++
T Consensus 156 ----l----~~~g~~~-----------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~ 215 (384)
T 1vgv_A 156 ----L----LRENVAD-----------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGHRR 215 (384)
T ss_dssp ----H----HHTTCCG-----------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCB
T ss_pred ----H----HHcCCCh-----------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeCCc
Confidence 2 1223322 1347888884 3221111100 000001235778888 854 44678899999
Q ss_pred CCC-CCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCc
Q 004760 453 NPG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (732)
Q Consensus 453 ~~~-KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P 531 (732)
.+. ||++.+++|+..+.++.|+
T Consensus 216 ~~~~kg~~~li~a~~~l~~~~~~--------------------------------------------------------- 238 (384)
T 1vgv_A 216 ESFGRGFEEICHALADIATTHQD--------------------------------------------------------- 238 (384)
T ss_dssp SSCCHHHHHHHHHHHHHHHHCTT---------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHHhhCCC---------------------------------------------------------
Confidence 876 9999999999999877654
Q ss_pred ccccCCCCCcccccCCCCccccCCcccceeEEec-cCch-hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEE
Q 004760 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK-SDGK-QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML 609 (732)
Q Consensus 532 ~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lliv-G~G~-~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~ 609 (732)
.+++++ |.++ ..+.++.++ +..++|.
T Consensus 239 ----------------------------~~l~i~~g~~~~~~~~l~~~~------------------------~~~~~v~ 266 (384)
T 1vgv_A 239 ----------------------------IQIVYPVHLNPNVREPVNRIL------------------------GHVKNVI 266 (384)
T ss_dssp ----------------------------EEEEEECCBCHHHHHHHHHHH------------------------TTCTTEE
T ss_pred ----------------------------eEEEEEcCCCHHHHHHHHHHh------------------------hcCCCEE
Confidence 123332 4332 222222221 1235899
Q ss_pred Eccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCcHHHHHHH
Q 004760 610 WTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPGAQVLAQN 686 (732)
Q Consensus 610 f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~~e~La~a 686 (732)
|+|.. +++..+|+.||++|+|| |.+++||||||+|||+++. ||..|+++++ +|+++++ |+ ++|+++
T Consensus 267 ~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~--~~la~~ 335 (384)
T 1vgv_A 267 LIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DK--QRIVEE 335 (384)
T ss_dssp EECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SH--HHHHHH
T ss_pred EeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CH--HHHHHH
Confidence 96532 78999999999999998 2348999999999999987 9999999988 9999976 65 999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 687 LRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 687 L~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
|.++++|++.+++|++++++.. +.|+|+++++.+.++|.++.+
T Consensus 336 i~~ll~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 336 VTRLLKDENEYQAMSRAHNPYG-DGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHHCHHHHHHHHSSCCTTC-CSCHHHHHHHHHHHTCCCC--
T ss_pred HHHHHhChHHHhhhhhccCCCc-CCCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999888765 569999999999888766543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=227.19 Aligned_cols=333 Identities=12% Similarity=0.095 Sum_probs=210.0
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHC-C-CEEEEEEeCCCCCChhH-HHhCCcEE-EEcCC-----Cch--------
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSC-G-ATVSAVVLSKRGGLMPE-LARRKIKV-LEDRG-----EPS-------- 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~-G-~~V~vv~l~~~g~l~~e-l~~~gI~v-~~~~~-----~~~-------- 305 (732)
.||++++.+.+.. ..+..++.+|.+. | ++|.+++.........+ +...++++ +.... ...
T Consensus 9 mkIl~v~~~~~~~---~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (375)
T 3beo_A 9 LKVMTIFGTRPEA---IKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLE 85 (375)
T ss_dssp EEEEEEECSHHHH---HHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHHH
T ss_pred ceEEEEecCcHHH---HHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHHHH
Confidence 5899998654322 2456788888876 4 78877763332222222 23345543 22211 100
Q ss_pred ----hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech--hH---hHH-Hhhhhhcc-ccEEEEecHHhHH
Q 004760 306 ----FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--RE---YFD-RAKLVLDR-VKLLVFLSESQTK 374 (732)
Q Consensus 306 ----~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r--~~---~~~-~~~~~l~r-~~~li~vS~~~~~ 374 (732)
+.++.+||+||+++.....+. ..+.....+.+ ++++.+..+ .. +.. .....+.+ ++.++++|+....
T Consensus 86 ~l~~~l~~~~pDvv~~~~~~~~~~~-~~~~~~~~~ip-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 86 GLDKVMKEAKPDIVLVHGDTTTTFI-ASLAAFYNQIP-VGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HHHHHHHHHCCSEEEEETTSHHHHH-HHHHHHHTTCC-EEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCCchHHHH-HHHHHHHHCCC-EEEEecccccccccCCChhHhhhhHHhhhhheeeCCCHHHHH
Confidence 223679999999764332222 22333344555 444443211 00 111 11122223 7889999988643
Q ss_pred HhhhHHHhhhhhccCCCccccccCCCccceEEeecCC-CCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC
Q 004760 375 QWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCS-LNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (732)
Q Consensus 375 ~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpng-vd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~ 453 (732)
. + ...+..+ ..+.+|+|| +|...+.+... .+..+++++ +++.++++++|++.
T Consensus 164 ~----~----~~~g~~~-----------~~i~vi~n~~~d~~~~~~~~~------~~~~~~~~~--~~~~~vl~~~gr~~ 216 (375)
T 3beo_A 164 N----L----QKENKDE-----------SRIFITGNTAIDALKTTVKET------YSHPVLEKL--GNNRLVLMTAHRRE 216 (375)
T ss_dssp H----H----HHTTCCG-----------GGEEECCCHHHHHHHHHCCSS------CCCHHHHTT--TTSEEEEEECCCGG
T ss_pred H----H----HHcCCCc-----------ccEEEECChhHhhhhhhhhhh------hhHHHHHhc--cCCCeEEEEecccc
Confidence 2 2 1223322 135789998 66544322110 002334444 35566788999998
Q ss_pred CC-CCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcc
Q 004760 454 PG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPV 532 (732)
Q Consensus 454 ~~-KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~ 532 (732)
+. ||++.+++|+..+.++.|+
T Consensus 217 ~~~K~~~~li~a~~~l~~~~~~---------------------------------------------------------- 238 (375)
T 3beo_A 217 NLGEPMRNMFRAIKRLVDKHED---------------------------------------------------------- 238 (375)
T ss_dssp GTTHHHHHHHHHHHHHHHHCTT----------------------------------------------------------
T ss_pred cchhHHHHHHHHHHHHHhhCCC----------------------------------------------------------
Confidence 75 9999999999999777665
Q ss_pred cccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEcc
Q 004760 533 RKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTP 612 (732)
Q Consensus 533 ~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G 612 (732)
.++ ++|.|+. ..+...+ .+.+ +..++|+|+|
T Consensus 239 ---------------------------~~~-i~~~g~~-~~~~~~~----------------~~~~----~~~~~v~~~g 269 (375)
T 3beo_A 239 ---------------------------VQV-VYPVHMN-PVVRETA----------------NDIL----GDYGRIHLIE 269 (375)
T ss_dssp ---------------------------EEE-EEECCSC-HHHHHHH----------------HHHH----TTCTTEEEEC
T ss_pred ---------------------------eEE-EEeCCCC-HHHHHHH----------------HHHh----hccCCEEEeC
Confidence 122 2344432 1111111 1111 2236899966
Q ss_pred ch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 613 AT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 613 ~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+. .++..+|++||++|+|| |.+++||||||+|||+++. ||..|+++++ +|+++++ |+ ++|+++|.+
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~--~~la~~i~~ 338 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DE--ETIFSLADE 338 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CH--HHHHHHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CH--HHHHHHHHH
Confidence 43 48999999999999988 5679999999999999964 9999999987 9999975 66 999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 690 LLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 690 LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++|++.+++|++++++.. +.|+|+++++.+.++++
T Consensus 339 ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 339 LLSDKEAHDKMSKASNPYG-DGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHTT
T ss_pred HHhChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHhh
Confidence 9999999999999988776 46999999999888763
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=227.20 Aligned_cols=307 Identities=10% Similarity=0.065 Sum_probs=198.5
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh--HhHH---Hhhhh---hccccEEEEecHHhHHHhhhHHHh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR--EYFD---RAKLV---LDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~--~~~~---~~~~~---l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
.+|+|++|.... ..+..++.....+ .++++.+|.... ..+. ..... +-..+.+.|.+......+...| +
T Consensus 123 ~~DiV~vHdyhl-~~l~~~lr~~~~~-~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~-~ 199 (482)
T 1uqt_A 123 DDDIIWIHDYHL-LPFAHELRKRGVN-NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCL-S 199 (482)
T ss_dssp TTCEEEEESGGG-TTHHHHHHHTTCC-SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH-H
T ss_pred CCCEEEEECchH-HHHHHHHHHhCCC-CcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHH-H
Confidence 569999987533 2233444433223 347777764311 1111 01111 1224667777665433222222 1
Q ss_pred hhhhccCC-CccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHH
Q 004760 383 EKLKLRSQ-PAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 383 e~i~l~~~-~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~L 461 (732)
..+..... ...+.. ......+.+||||+|++.|.+.......+- +..+|++++ ++.+|+++||+.+.||++.+
T Consensus 200 ~~l~~~~~~~~~~~~--~g~~~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~l 273 (482)
T 1uqt_A 200 NLTRVTTRSAKSHTA--WGKAFRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPER 273 (482)
T ss_dssp HHSCEEEETTTEEEE--TTEEEEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHH
T ss_pred HHhCCccccCCeEEE--CCeEEEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHH
Confidence 11111000 000111 112345789999999988754321000000 256788887 56899999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
|+|++.+.++.|+. +
T Consensus 274 l~A~~~ll~~~p~~------------------------~----------------------------------------- 288 (482)
T 1uqt_A 274 FLAYEALLEKYPQH------------------------H----------------------------------------- 288 (482)
T ss_dssp HHHHHHHHHHCGGG------------------------T-----------------------------------------
T ss_pred HHHHHHHHHhCccc------------------------c-----------------------------------------
Confidence 99999998887751 0
Q ss_pred ccccCCCCccccCCcccceeEEeccC-----chhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC--CcEE-Eccc
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSD-----GKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS--KAML-WTPA 613 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~-----G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~--~~V~-f~G~ 613 (732)
.+..|+++|. |++.+.++..+ +++...+...++.. ..|+ |.|.
T Consensus 289 ----------------~~v~Lv~vG~p~~~~~~~~~~l~~~l-------------~~l~~~in~~~g~~~~~~v~~~~g~ 339 (482)
T 1uqt_A 289 ----------------GKIRYTQIAPTSRGDVQAYQDIRHQL-------------ENEAGRINGKYGQLGWTPLYYLNQH 339 (482)
T ss_dssp ----------------TTEEEEEECCBCSTTSHHHHHHHHHH-------------HHHHHHHHHHHCBTTBCSEEEECSC
T ss_pred ----------------CcEEEEEEECCCccchHHHHHHHHHH-------------HHHHHHHhhhcccCCCceEEEeCCC
Confidence 1124555664 33333333222 12222222112222 2355 4564
Q ss_pred --hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC-----CEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHH
Q 004760 614 --TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-----PVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQN 686 (732)
Q Consensus 614 --~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl-----PVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~a 686 (732)
.+++..+|++||+||+||. .||||++++||||||+ |||+|+.+|..+.+. +|+++++.|+ +++|++
T Consensus 340 v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~--~~lA~a 412 (482)
T 1uqt_A 340 FDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDR--DEVAAA 412 (482)
T ss_dssp CCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCH--HHHHHH
T ss_pred CCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCH--HHHHHH
Confidence 4899999999999999997 9999999999999997 899999988888783 7899999998 999999
Q ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 687 LRYLLKN-PSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 687 L~~LL~n-~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
|.+++++ ++.++++++++++.+.+ |+|+.++++|++.|+++
T Consensus 413 i~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 413 LDRALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhc
Confidence 9999984 67889999999999976 99999999999999876
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=194.76 Aligned_cols=130 Identities=20% Similarity=0.322 Sum_probs=106.6
Q ss_pred eeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCC
Q 004760 560 RKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGET 637 (732)
Q Consensus 560 ~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Eg 637 (732)
.+++++|.|+..+.++.++... ++ +|.| |+. +++..+|+.||++|+||. .|+
T Consensus 33 ~~l~i~G~g~~~~~~~~~~~~~---------------------~~--~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~ 86 (166)
T 3qhp_A 33 IVLLLKGKGPDEKKIKLLAQKL---------------------GV--KAEF-GFVNSNELLEILKTCTLYVHAAN--VES 86 (166)
T ss_dssp EEEEEECCSTTHHHHHHHHHHH---------------------TC--EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCC
T ss_pred eEEEEEeCCccHHHHHHHHHHc---------------------CC--eEEE-eecCHHHHHHHHHhCCEEEECCc--ccC
Confidence 4688889988777666665433 44 7888 875 789999999999999998 999
Q ss_pred CcHHHHHHHHcCC-CEEE-cCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHH
Q 004760 638 FGRVTIEAMAFGV-PVLG-TDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKK 715 (732)
Q Consensus 638 fg~vilEAMA~Gl-PVI~-td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~ 715 (732)
||++++||||||+ |||+ ++.|+..|++.++.+ +++++|+ ++++++|.++++|++.+++|++++++.+ ++|+|+
T Consensus 87 ~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~--~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~s~~ 161 (166)
T 3qhp_A 87 EAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNA--KDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLE 161 (166)
T ss_dssp CCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCH--HHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHC--
T ss_pred ccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCH--HHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHCChh
Confidence 9999999999998 9999 567999999988654 7788887 9999999999999999999999999988 579999
Q ss_pred HHHHH
Q 004760 716 HMYKK 720 (732)
Q Consensus 716 ~~~~~ 720 (732)
+++++
T Consensus 162 ~~~~~ 166 (166)
T 3qhp_A 162 NSVIQ 166 (166)
T ss_dssp -----
T ss_pred hhhcC
Confidence 98764
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=220.14 Aligned_cols=107 Identities=11% Similarity=0.129 Sum_probs=95.6
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHH-------HcCCCEEEcCCCChhhhhccCceEEE-
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAM-------AFGVPVLGTDAGGTKEIVEHNVTGLL- 672 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAM-------A~GlPVI~td~gG~~EiVe~g~~Gll- 672 (732)
++.++|+|+|++ +++..+|++||++|+||. .|+||++++||| |||+|||+|+. +.++.+|++
T Consensus 262 ~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~ 333 (406)
T 2hy7_A 262 GYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFG 333 (406)
T ss_dssp TCCTTEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEE
T ss_pred CCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEE
Confidence 677899999987 689999999999999998 999999999999 99999999988 667789999
Q ss_pred ECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHHhh
Q 004760 673 HPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV--IYKCM 729 (732)
Q Consensus 673 ~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev--~~~~l 729 (732)
++++|+ ++|+++|..+++|++. ...+.|+|+.++++++++ |..+.
T Consensus 334 v~~~d~--~~la~ai~~ll~~~~~----------~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 334 YTPGNA--DSVIAAITQALEAPRV----------RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp ECTTCH--HHHHHHHHHHHHCCCC----------CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred eCCCCH--HHHHHHHHHHHhCcch----------hhhhcCCHHHHHHHHHHhhcccccC
Confidence 999988 9999999999998871 223579999999999999 76653
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=218.38 Aligned_cols=304 Identities=12% Similarity=0.096 Sum_probs=202.0
Q ss_pred EEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCC-ChhHHHhCCcE--EEEcCCCch-----hhhhcCccEEEeC
Q 004760 247 LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPELARRKIK--VLEDRGEPS-----FKTSMKADLVIAG 318 (732)
Q Consensus 247 lI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~-l~~el~~~gI~--v~~~~~~~~-----~~~~~k~DlVia~ 318 (732)
+.+|..|. |...++..|+++|.+.| +|.+.+.+..+. ...++. .++. +. .+.... +.+..+||+||+.
T Consensus 43 iwih~~s~-G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p~~~~~~l~~~l~~~~pDiv~~~ 118 (374)
T 2xci_A 43 LWVHTASI-GEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKS-DFYDCLHP-LPLDNPFSVKRFEELSKPKALIVV 118 (374)
T ss_dssp EEEECSSH-HHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CCCSSHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEcCCH-HHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhc-ccccceeE-CCCCCHHHHHHHHHHhCCCEEEEE
Confidence 45777775 66889999999999999 887666433332 112221 3565 44 444322 4447799999864
Q ss_pred CchhhHHHHHHHHhhcCCCccEEEEEeechhHhHHHhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccC
Q 004760 319 SAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSV 398 (732)
Q Consensus 319 Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~~~~~~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~ 398 (732)
.. ..|.. ++.. ... + ++.+........ ..+..+.+++.+++.|+..... . ..++.
T Consensus 119 ~~--~~~~~-~~~~-~~~-p-~~~~~~~~~~~~--~~~~~~~~~d~ii~~S~~~~~~----l----~~~g~--------- 173 (374)
T 2xci_A 119 ER--EFWPS-LIIF-TKV-P-KILVNAYAKGSL--IEKILSKKFDLIIMRTQEDVEK----F----KTFGA--------- 173 (374)
T ss_dssp SC--CCCHH-HHHH-CCS-C-EEEEEECCCCCH--HHHHHHTTCSEEEESCHHHHHH----H----HTTTC---------
T ss_pred Cc--cCcHH-HHHH-HhC-C-EEEEEeecCchH--HHHHHHHhCCEEEECCHHHHHH----H----HHcCC---------
Confidence 21 12222 2222 222 3 332221111111 2234456688999999997443 2 11221
Q ss_pred CCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchh
Q 004760 399 NDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDS 478 (732)
Q Consensus 399 n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~ 478 (732)
. .+.+++|+. |.+.... . +. + ..+++++.|+ ..||++.+++|++.+.++.|+
T Consensus 174 ~----ki~vi~n~~----f~~~~~~-~---------~~--l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~---- 225 (374)
T 2xci_A 174 K----RVFSCGNLK----FICQKGK-G---------IK--L--KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSS---- 225 (374)
T ss_dssp C----SEEECCCGG----GCCCCCS-C---------CC--C--SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTT----
T ss_pred C----eEEEcCCCc----cCCCcCh-h---------hh--h--cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCC----
Confidence 1 247888863 1111100 0 00 1 1245666665 468999999999999766665
Q ss_pred hhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCccc
Q 004760 479 KIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHL 558 (732)
Q Consensus 479 ~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~ 558 (732)
T Consensus 226 -------------------------------------------------------------------------------- 225 (374)
T 2xci_A 226 -------------------------------------------------------------------------------- 225 (374)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEEeccCchhh-hhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCC--------CcEEEccchhhHHHHHHHcCEEEE
Q 004760 559 RRKVLSKSDGKQQ-QALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS--------KAMLWTPATTRVASLYSAADVYVI 629 (732)
Q Consensus 559 ~~~LlivG~G~~~-~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~--------~~V~f~G~~~dv~~lysaADv~V~ 629 (732)
.+++++|+|+++ +.++.++... ++. .+|.+.|+++++..+|+.||++++
T Consensus 226 -~~lvivG~g~~~~~~l~~~~~~~---------------------gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl 283 (374)
T 2xci_A 226 -LKLILVPRHIENAKIFEKKARDF---------------------GFKTSFFENLEGDVILVDRFGILKELYPVGKIAIV 283 (374)
T ss_dssp -CEEEEEESSGGGHHHHHHHHHHT---------------------TCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEE
T ss_pred -cEEEEECCCHHHHHHHHHHHHHC---------------------CCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEE
Confidence 367888999876 4666665433 333 478999988999999999999988
Q ss_pred ccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccC-ceEEEECCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 630 NSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHN-VTGLLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKK 707 (732)
Q Consensus 630 pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g-~~Gll~~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~ 707 (732)
||. +.|++|++++||||||+|||++ +.++..|++++. .+|++++++|+ ++|+++|.++++| +.+++|++++++.
T Consensus 284 ~ss-~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~--~~La~ai~~ll~d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 284 GGT-FVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNE--TELVTKLTELLSV-KKEIKVEEKSREI 359 (374)
T ss_dssp CSS-SSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSH--HHHHHHHHHHHHS-CCCCCHHHHHHHH
T ss_pred CCc-ccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCH--HHHHHHHHHHHhH-HHHHHHHHHHHHH
Confidence 875 2578899999999999999975 789999988753 47888888887 9999999999999 9999999999999
Q ss_pred HHHhcC
Q 004760 708 VERMYL 713 (732)
Q Consensus 708 v~~~ys 713 (732)
+++++.
T Consensus 360 ~~~~~g 365 (374)
T 2xci_A 360 KGCYLE 365 (374)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 887544
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-20 Score=210.45 Aligned_cols=304 Identities=9% Similarity=0.059 Sum_probs=203.3
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech--hHhHHH--------hhhhhccccEEEEecHHhHHHhhhHH
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--REYFDR--------AKLVLDRVKLLVFLSESQTKQWLTWC 380 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r--~~~~~~--------~~~~l~r~~~li~vS~~~~~~~~~~~ 380 (732)
.-|+|..|--... .++.++..... ..++.|..|-.- .+.|.. .-..+-..+.+.|.+......+...|
T Consensus 149 ~~D~VwVhDYhL~-llp~~lR~~~~-~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~ 226 (496)
T 3t5t_A 149 ADPVYLVHDYQLV-GVPALLREQRP-DAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESV 226 (496)
T ss_dssp SSCEEEEESGGGT-THHHHHHHHCT-TSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCccHh-HHHHHHHhhCC-CCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHH
Confidence 4678877754332 13344433222 234666655221 111111 11223348899999988766666666
Q ss_pred HhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHH
Q 004760 381 EEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLL 460 (732)
Q Consensus 381 ~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~ 460 (732)
...-.........-.+...+....+.++|+|+|+..|.+... + .+..+|++++ +..+|+++||+.+.||++.
T Consensus 227 ~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~-~----~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~ 298 (496)
T 3t5t_A 227 ADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP-Q----LPEGIEEWAD---GHRLVVHSGRTDPIKNAER 298 (496)
T ss_dssp HHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----C-C----CCTTHHHHHT---TSEEEEEEEESSGGGCHHH
T ss_pred HHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhH-H----HHHHHHHHhC---CceEEEEcccCccccCHHH
Confidence 322101011000001222334456789999999999976532 1 1245777887 5789999999999999999
Q ss_pred HHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCC
Q 004760 461 LVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPS 540 (732)
Q Consensus 461 LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~ 540 (732)
+|+|+ .+.++.|+.
T Consensus 299 lL~Af-~ll~~~P~~----------------------------------------------------------------- 312 (496)
T 3t5t_A 299 AVRAF-VLAARGGGL----------------------------------------------------------------- 312 (496)
T ss_dssp HHHHH-HHHHHTSSC-----------------------------------------------------------------
T ss_pred HHHHH-HHHHhCccc-----------------------------------------------------------------
Confidence 99999 998888861
Q ss_pred cccccCCCCccccCCcccceeEEec-----cCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccc--
Q 004760 541 LFTSIGNTDAVSFGSGHLRRKVLSK-----SDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA-- 613 (732)
Q Consensus 541 lf~~~~~~d~v~iG~~~~~~~Lliv-----G~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~-- 613 (732)
. +..|+.+ |+++..++++..+ +++...+...++.. .|+|+|.
T Consensus 313 ----------------~-~v~Lv~Vg~psr~~~~~y~~l~~~l-------------~~lv~~in~~~g~~-~V~f~g~v~ 361 (496)
T 3t5t_A 313 ----------------E-KTRMLVRMNPNRLYVPANADYVHRV-------------ETAVAEANAELGSD-TVRIDNDND 361 (496)
T ss_dssp ----------------T-TEEEEEEEECCCTTSHHHHHHHHHH-------------HHHHHHHHHHHCTT-SEEEEECCC
T ss_pred ----------------c-eEEEEEEECCCCCCchHHHHHHHHH-------------HHHHHHhccccCCc-CEEEeCCCC
Confidence 0 0123333 3444444444333 22222232222333 7999986
Q ss_pred hhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcC---CCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHH
Q 004760 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG---VPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYL 690 (732)
Q Consensus 614 ~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~G---lPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~L 690 (732)
.+++..+|++||++|+||. .||||++++|||||| .|+|+|+.+|..+.+. .+|+++++.|+ +++|++|.++
T Consensus 362 ~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~--~~allVnP~D~--~~lA~AI~~a 435 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAAEVLG--EYCRSVNPFDL--VEQAEAISAA 435 (496)
T ss_dssp HHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG--GGSEEECTTBH--HHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC--CCEEEECCCCH--HHHHHHHHHH
Confidence 4789999999999999997 999999999999997 8999999999888884 36999999988 9999999999
Q ss_pred hcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 691 LKNP-SVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 691 L~n~-~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+.++ +.++++.++.++.+.+ ++..++++.|++.+..+
T Consensus 436 L~m~~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 436 LAAGPRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp HHCCHHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhc
Confidence 9864 7888888899998875 99999999999988765
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=185.85 Aligned_cols=154 Identities=21% Similarity=0.247 Sum_probs=126.9
Q ss_pred hCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCccc
Q 004760 437 MGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSN 516 (732)
Q Consensus 437 lgl~~~~~lil~vGri~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~ 516 (732)
+.++.++++|+++|++.+.||++.+++|+..+ ++
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~------------------------------------------ 50 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QD------------------------------------------ 50 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TT------------------------------------------
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC----CC------------------------------------------
Confidence 34567778899999999999999999999977 33
Q ss_pred ccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHH
Q 004760 517 ELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILE 596 (732)
Q Consensus 517 ~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~ 596 (732)
.+++++|.|+..+.++.++.
T Consensus 51 -------------------------------------------~~l~i~G~~~~~~~l~~~~~----------------- 70 (177)
T 2f9f_A 51 -------------------------------------------EKLYIVGWFSKGDHAERYAR----------------- 70 (177)
T ss_dssp -------------------------------------------SCEEEEBCCCTTSTHHHHHH-----------------
T ss_pred -------------------------------------------cEEEEEecCccHHHHHHHHH-----------------
Confidence 24667787766554444442
Q ss_pred HHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEEC
Q 004760 597 FLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHP 674 (732)
Q Consensus 597 ~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~ 674 (732)
.+ .+++.++|.|+|++ +++..+|+.||++|+||. .|+||++++||||||+|||+++.++..|+++++.+|+++
T Consensus 71 ~~--~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~- 145 (177)
T 2f9f_A 71 KI--MKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV- 145 (177)
T ss_dssp HH--HHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-
T ss_pred hh--hcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-
Confidence 00 22677899999988 459999999999999998 999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHhcCHHH-HHHHHHH
Q 004760 675 PGHPGAQVLAQNLRYLLKNPSV-RERMAME 703 (732)
Q Consensus 675 ~~d~~~e~La~aL~~LL~n~~~-r~~m~~~ 703 (732)
+.|. ++|+++|.++++|++. ++++.++
T Consensus 146 ~~d~--~~l~~~i~~l~~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 146 NADV--NEIIDAMKKVSKNPDKFKKDCFRR 173 (177)
T ss_dssp CSCH--HHHHHHHHHHHHCTTTTHHHHHHH
T ss_pred CCCH--HHHHHHHHHHHhCHHHHHHHHHHH
Confidence 7777 9999999999999875 4444333
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=200.20 Aligned_cols=327 Identities=14% Similarity=0.061 Sum_probs=201.8
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHHC-CCEEEEEEeCCCCCC-hhHHHhCCcEE-EEcCCC----c----------h
Q 004760 243 RKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGL-MPELARRKIKV-LEDRGE----P----------S 305 (732)
Q Consensus 243 ~kIllI~h~ls~gGA~~~~~eLA~~L~~~-G~~V~vv~l~~~g~l-~~el~~~gI~v-~~~~~~----~----------~ 305 (732)
.||++++.+.+..| .+..|+++|.+. ||+|.+++....... ...+...++.+ +..... . .
T Consensus 6 mkIl~v~~~~~~~~---~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 6 KRVVLAFGTRPEAT---KMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQ 82 (376)
T ss_dssp EEEEEEECSHHHHH---HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEEEEeccHHHH---HHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHH
Confidence 58999986643222 356889999998 799888773322111 22345566654 333211 0 0
Q ss_pred ---hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh-----HhHH-Hhhhhhc-cccEEEEecHHhHHH
Q 004760 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-----EYFD-RAKLVLD-RVKLLVFLSESQTKQ 375 (732)
Q Consensus 306 ---~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~-----~~~~-~~~~~l~-r~~~li~vS~~~~~~ 375 (732)
+.+..+||+||+++.....|. ..++....+.+ +++..+.... .+.. .....+. ..+.+++.|+.....
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~-~~~~a~~~~ip-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 160 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFA-VAWAAFLEGIP-VGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKAN 160 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHH-HHHHHHHTTCC-EEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCChHHHHH-HHHHHHHhCCC-EEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCHHHHHH
Confidence 223779999999764333333 23344445555 4332211110 0001 1112222 267788888775332
Q ss_pred hhhHHHhhhhhccCCCccccccCCCccceEEeecCCC-CCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCC
Q 004760 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSL-NTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINP 454 (732)
Q Consensus 376 ~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngv-d~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~ 454 (732)
. .+.+..+ ..+.+++|+. |...+. . . +..+|+++ +++.++++++||+..
T Consensus 161 ----l----~~~g~~~-----------~ki~vi~n~~~d~~~~~--~--~-----~~~~~~~~--~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 161 ----L----LKEGKRE-----------EGILVTGQTGVDAVLLA--A--K-----LGRLPEGL--PEGPYVTVTMHRREN 210 (376)
T ss_dssp ----H----HTTTCCG-----------GGEEECCCHHHHHHHHH--H--H-----HCCCCTTC--CSSCEEEECCCCGGG
T ss_pred ----H----HHcCCCc-----------ceEEEECCchHHHHhhh--h--h-----hhHHHHhc--CCCCEEEEEeCcccc
Confidence 2 2223322 1246777753 211110 0 0 01122333 245567788999988
Q ss_pred CCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccc
Q 004760 455 GKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRK 534 (732)
Q Consensus 455 ~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 534 (732)
.||++.+++|++.+.++.|+
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~------------------------------------------------------------ 230 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPH------------------------------------------------------------ 230 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTT------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHhhCCC------------------------------------------------------------
Confidence 88999999999999777664
Q ss_pred cCCCCCcccccCCCCccccCCcccceeEEe-ccCch-hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEc-
Q 004760 535 NLLSPSLFTSIGNTDAVSFGSGHLRRKVLS-KSDGK-QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT- 611 (732)
Q Consensus 535 n~~~p~lf~~~~~~d~v~iG~~~~~~~Lli-vG~G~-~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~- 611 (732)
.++++ .|.++ .++.++.++ +..++|+|+
T Consensus 231 -------------------------~~lv~~~g~~~~~~~~l~~~~------------------------~~~~~v~~~g 261 (376)
T 1v4v_A 231 -------------------------LTFVYPVHLNPVVREAVFPVL------------------------KGVRNFVLLD 261 (376)
T ss_dssp -------------------------SEEEEECCSCHHHHHHHHHHH------------------------TTCTTEEEEC
T ss_pred -------------------------eEEEEECCCCHHHHHHHHHHh------------------------ccCCCEEEEC
Confidence 12333 36554 233333332 113589999
Q ss_pred --cchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCcHHHHHHHHH
Q 004760 612 --PATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLR 688 (732)
Q Consensus 612 --G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~ 688 (732)
|+. ++..+|++||++|+|| .|+ ++||||||+|||++ +.++..|+++++ +|++++ .|+ ++|+++|.
T Consensus 262 ~~g~~-~~~~~~~~ad~~v~~S------~g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~--~~la~~i~ 329 (376)
T 1v4v_A 262 PLEYG-SMAALMRASLLLVTDS------GGL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDP--EGVYRVVK 329 (376)
T ss_dssp CCCHH-HHHHHHHTEEEEEESC------HHH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCH--HHHHHHHH
T ss_pred CCCHH-HHHHHHHhCcEEEECC------cCH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCH--HHHHHHHH
Confidence 555 8999999999999988 233 88999999999998 569999988765 799886 355 99999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 689 YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 689 ~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
++++|++.+++|++++ +.|.+...++++.+.+.+++.
T Consensus 330 ~ll~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLENPEELSRMRKAK-----NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHTCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHhChHhhhhhcccC-----CCCCCChHHHHHHHHHHHHhc
Confidence 9999999999998643 356776777888888777665
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-17 Score=172.81 Aligned_cols=117 Identities=17% Similarity=0.147 Sum_probs=100.2
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|.|.|+. ++..+|+.||++|.++ .+.+++|||++|+|+|++..++ ..+.+.+..+|+++++++.
T Consensus 289 ~~~~~v~~~~~~-~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~ 361 (412)
T 3otg_A 289 EVPANVRLESWV-PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNI 361 (412)
T ss_dssp CCCTTEEEESCC-CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGC
T ss_pred cCCCcEEEeCCC-CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 345789999999 8999999999999666 4579999999999999976654 7778887789999988744
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
++++|+++|.++++|++.+++|++.+++... .++++++++.+.+++..
T Consensus 362 ~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 362 SPDSVSGAAKRLLAEESYRAGARAVAAEIAA-MPGPDEVVRLLPGFASR 409 (412)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-SCCHHHHHTTHHHHHC-
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHhcc
Confidence 5599999999999999999999999988776 58999999999888754
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-16 Score=168.81 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=85.5
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh--------hhhhccCceEEEECCCC
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT--------KEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~--------~EiVe~g~~Gll~~~~d 677 (732)
.++.+.++.++++++|++||++|.-+ .+.++.|+|++|+|+|....+.. .+.+.+...|++++..+
T Consensus 235 ~~~~v~~f~~dm~~~l~~aDlvI~ra------G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 235 VEADVAPFISDMAAAYAWADLVICRA------GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp CCCEEESCCSCHHHHHHHCSEEEECC------CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred cccccccchhhhhhhhccceEEEecC------CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 46788899999999999999999544 47899999999999998766431 24455556899998887
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQV 724 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev 724 (732)
.+++.|+++|.++++||+.+++|++++++.... ...+++++.++++
T Consensus 309 ~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~-~aa~~ia~~i~~l 354 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPETLRSMADQARSLAKP-EATRTVVDACLEV 354 (365)
T ss_dssp CCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCT-THHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHH
Confidence 777999999999999999999999999865432 3334444444443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.9e-15 Score=158.25 Aligned_cols=116 Identities=11% Similarity=0.116 Sum_probs=95.6
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCCc
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~~ 679 (732)
++++|.+.|+.++. .+|+.||++|..+ .+++++|||++|+|+|++..++ ..+.+.+...|++++.++.+
T Consensus 281 ~~~~v~~~~~~~~~-~~l~~ad~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 353 (430)
T 2iyf_A 281 LPDNVEVHDWVPQL-AILRQADLFVTHA------GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEAT 353 (430)
T ss_dssp CCTTEEEESSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CC
T ss_pred CCCCeEEEecCCHH-HHhhccCEEEECC------CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCC
Confidence 45689999998777 8999999999755 3479999999999999998765 45666667789999877555
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
.+.|+++|.++++|++.+++|++.+++... .++++++++.+.+++.+
T Consensus 354 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 354 ADLLRETALALVDDPEVARRLRRIQAEMAQ-EGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHhhc
Confidence 699999999999999999999998887665 47888888888776543
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=165.43 Aligned_cols=341 Identities=14% Similarity=0.155 Sum_probs=199.9
Q ss_pred hhhhccCCeEEEEeCCCCCCcHHHHHHHHHHHHHHC-CCEEEEEEeCCCCC-ChhHHHhCCcE-EEEcCC--C-ch----
Q 004760 236 FARFVWSRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGG-LMPELARRKIK-VLEDRG--E-PS---- 305 (732)
Q Consensus 236 ~~~~~~~~kIllI~h~ls~gGA~~~~~eLA~~L~~~-G~~V~vv~l~~~g~-l~~el~~~gI~-v~~~~~--~-~~---- 305 (732)
|.+-|..+||++|+.+-+ | -..+..|.++|.+. |+++.+++....-. ..+.++..+++ .+.+.. . ..
T Consensus 19 ~~~~~~m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~ 95 (396)
T 3dzc_A 19 YFQSNAMKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGV 95 (396)
T ss_dssp -----CCEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHH
T ss_pred hHHhCCCCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHH
Confidence 444466689999976654 2 23456788899886 78887676222111 12335567773 223322 1 11
Q ss_pred ----------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeech-----hHhHHHhh-hhhcc-ccEEEEe
Q 004760 306 ----------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-----REYFDRAK-LVLDR-VKLLVFL 368 (732)
Q Consensus 306 ----------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r-----~~~~~~~~-~~l~r-~~~li~v 368 (732)
+..+.+||+||++......| ...++.+..+.| ++....-.+ ..+..... ..+.+ .+.+++.
T Consensus 96 ~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~-~~~~aa~~~~IP-v~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~ 173 (396)
T 3dzc_A 96 TSKILLGMQQVLSSEQPDVVLVHGDTATTF-AASLAAYYQQIP-VGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAP 173 (396)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTSHHHH-HHHHHHHTTTCC-EEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCchhHH-HHHHHHHHhCCC-EEEEECCccccccccCCcHHHHHHHHHHhcCEEECC
Confidence 33378999999876443333 334555666766 433211000 01112111 22233 4666677
Q ss_pred cHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCC-CCCCCCCchhhHHHhHHhHHHHHHHhC-CCCCC-EE
Q 004760 369 SESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCS-LNTPTSSPEKMREKRNLLRDSVRKEMG-LTDQD-ML 445 (732)
Q Consensus 369 S~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpng-vd~~~f~~~~~~ekr~~~r~~~R~~lg-l~~~~-~l 445 (732)
++..... . ++.+..+ + .+.++.|+ +|...+.+... +....++..+|+++| ++.++ ++
T Consensus 174 se~~~~~----l----~~~G~~~-------~----ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~v 233 (396)
T 3dzc_A 174 TDTSRAN----L----LQENYNA-------E----NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLI 233 (396)
T ss_dssp SHHHHHH----H----HHTTCCG-------G----GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEE
T ss_pred CHHHHHH----H----HHcCCCc-------C----cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEE
Confidence 7764332 2 2334433 1 23566653 22211111100 000112367889999 45444 44
Q ss_pred EEEEecC-CCCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhh
Q 004760 446 VLSLSSI-NPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSES 524 (732)
Q Consensus 446 il~vGri-~~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~ 524 (732)
+++.+|. +..|+++.+++|+..+.++.|+
T Consensus 234 lv~~hR~~~~~~~~~~ll~A~~~l~~~~~~-------------------------------------------------- 263 (396)
T 3dzc_A 234 LVTGHRRESFGGGFERICQALITTAEQHPE-------------------------------------------------- 263 (396)
T ss_dssp EEECSCBCCCTTHHHHHHHHHHHHHHHCTT--------------------------------------------------
T ss_pred EEEECCcccchhHHHHHHHHHHHHHHhCCC--------------------------------------------------
Confidence 5555564 3568899999999999877665
Q ss_pred hhccCCcccccCCCCCcccccCCCCccccCCcccceeEEe-ccCchh-hhhHhhhhhccCCCCCChhhHHHHHHHHHhcC
Q 004760 525 FTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLS-KSDGKQ-QQALKILIGSVGSKSNKVPYVKEILEFLSQHS 602 (732)
Q Consensus 525 ~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~Lli-vG~G~~-~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l 602 (732)
.++++ .|.++. ++.++.+ +
T Consensus 264 -----------------------------------~~~v~~~g~~~~~~~~l~~~------------------------~ 284 (396)
T 3dzc_A 264 -----------------------------------CQILYPVHLNPNVREPVNKL------------------------L 284 (396)
T ss_dssp -----------------------------------EEEEEECCBCHHHHHHHHHH------------------------T
T ss_pred -----------------------------------ceEEEEeCCChHHHHHHHHH------------------------H
Confidence 12333 343321 1222211 1
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCc
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
+..++|+++++. .++..+|++||++|.+| + |. ++|||++|+|||++ +.++..|+++++ ++++++. |.
T Consensus 285 ~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G---g~-~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~- 354 (396)
T 3dzc_A 285 KGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G---GI-QEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-NQ- 354 (396)
T ss_dssp TTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S---GG-GTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-CH-
T ss_pred cCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c---cH-HHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-CH-
Confidence 334689997765 58889999999999888 2 33 38999999999999 778889999887 5677764 55
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++++++..+++|++.+++|++++. .|.....++++.+++.
T Consensus 355 -~~l~~ai~~ll~d~~~~~~m~~~~~-----~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 355 -QQICDALSLLLTDPQAYQAMSQAHN-----PYGDGKACQRIADILA 395 (396)
T ss_dssp -HHHHHHHHHHHHCHHHHHHHHTSCC-----TTCCSCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHcCHHHHHHHhhccC-----CCcCChHHHHHHHHHh
Confidence 9999999999999999999987653 3566666777776654
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.3e-16 Score=166.24 Aligned_cols=112 Identities=13% Similarity=0.147 Sum_probs=89.0
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc----CCCChhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT----DAGGTKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t----d~gG~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|++.|+. ++..+|..||++|.. +.+.+++|||++|+|+|+. +..+..+.+++...|++++.++.
T Consensus 281 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 281 PLPEGVLAAGQF-PLSAIMPACDVVVHH------GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp -CCTTEEEESCC-CHHHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred cCCCcEEEeCcC-CHHHHHhhCCEEEec------CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 346789999998 689999999999943 4578999999999999994 55577888888889999987754
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLS 722 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ 722 (732)
+.+.|+++|.++++|++.+++|++.+++... ..+++++++.+.
T Consensus 354 ~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 396 (398)
T 4fzr_A 354 GVESVLAACARIRDDSSYVGNARRLAAEMAT-LPTPADIVRLIE 396 (398)
T ss_dssp ---CHHHHHHHHHHCTHHHHHHHHHHHHHTT-SCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc-CCCHHHHHHHHh
Confidence 4589999999999999999999888877654 588888887664
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-14 Score=150.18 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=96.7
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-----CCCChhhhhccCceEEEECCCCC
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-----DAGGTKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-----d~gG~~EiVe~g~~Gll~~~~d~ 678 (732)
++++|++.++.++. ++|..||++|..+ ...+++|||++|+|+|+. +..+..+.+.+...|..++.++.
T Consensus 279 ~~~~v~~~~~~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~ 351 (402)
T 3ia7_A 279 LPPNVEAHQWIPFH-SVLAHARACLTHG------TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQL 351 (402)
T ss_dssp CCTTEEEESCCCHH-HHHTTEEEEEECC------CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGC
T ss_pred CCCcEEEecCCCHH-HHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCC
Confidence 45789999998777 9999999999665 346889999999999954 44567778888889999887755
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKC 728 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~ 728 (732)
+.+.|++++.++++|++.+++|++.+.+.. +....+++++.+.+++...
T Consensus 352 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 352 EPASIREAVERLAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLGRV 400 (402)
T ss_dssp SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhhc
Confidence 669999999999999999999988776654 4588899999888887653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.2e-15 Score=158.21 Aligned_cols=116 Identities=9% Similarity=0.097 Sum_probs=91.8
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC----CCChhhhhccCceEEEECC--C
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD----AGGTKEIVEHNVTGLLHPP--G 676 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td----~gG~~EiVe~g~~Gll~~~--~ 676 (732)
+++++|++.|+. +...++..||++|.. +.+.+++|||++|+|+|+.. ..+..+.+++...|+++++ .
T Consensus 267 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 267 DLPDNARIAESV-PLNLFLRTCELVICA------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp TCCTTEEECCSC-CGGGTGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred cCCCCEEEeccC-CHHHHHhhCCEEEeC------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 345789999987 345677999999944 45679999999999999954 4556777888889999987 3
Q ss_pred CCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+.+.+.|++++.++++|++.+++|++.+++... ...++++++.+.+++.
T Consensus 340 ~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA-MPHPAALVRTLENTAA 388 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT-SCCHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHh
Confidence 334499999999999999999999888776654 5888888887776553
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-14 Score=158.12 Aligned_cols=110 Identities=21% Similarity=0.186 Sum_probs=87.2
Q ss_pred CCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCcH
Q 004760 604 LSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPGA 680 (732)
Q Consensus 604 l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~~ 680 (732)
..++|+++++. .++..+|++||++|.+| |.+.+|||++|+|+|++ +.++..|.++.+ +|++++. |.
T Consensus 280 ~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~-- 348 (403)
T 3ot5_A 280 GHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NK-- 348 (403)
T ss_dssp TCTTEEEECCCCHHHHHHHHHHEEEEEECC-------HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CH--
T ss_pred CCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CH--
Confidence 34689999976 49999999999999777 23448999999999999 778888998776 8888864 55
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 681 QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
+++++++..++.|++.+++|+.++. .|.....++++.+++...+
T Consensus 349 ~~l~~ai~~ll~~~~~~~~m~~~~~-----~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 349 ENLIKEALDLLDNKESHDKMAQAAN-----PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHSCC-----TTCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHhhcC-----cccCCcHHHHHHHHHHHHh
Confidence 9999999999999999999976543 3444555666666665544
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=148.37 Aligned_cols=111 Identities=19% Similarity=0.204 Sum_probs=92.1
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEE----cCCCChh--hhhccCceEEEECCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLG----TDAGGTK--EIVEHNVTGLLHPPG 676 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~----td~gG~~--EiVe~g~~Gll~~~~ 676 (732)
+++++|.+.|+. ++..+|..||++|.. +.+.++.|||++|+|+|+ .+..+.. +.+++...|++++.+
T Consensus 280 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 280 TLPRNVRAVGWT-PLHTLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp SCCTTEEEESSC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred cCCCcEEEEccC-CHHHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 456789999998 899999999999943 456799999999999999 6668888 999888899999877
Q ss_pred CCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
+.+.+.++ ++++|++.+++|++.+++... ..+++.+++.+.+++
T Consensus 353 ~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 353 KVDADLLR----RLIGDESLRTAAREVREEMVA-LPTPAETVRRIVERI 396 (398)
T ss_dssp GCCHHHHH----HHHHCHHHHHHHHHHHHHHHT-SCCHHHHHHHHHHHH
T ss_pred CCCHHHHH----HHHcCHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHh
Confidence 65446665 888999999999888877654 589999888887765
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=8.3e-13 Score=142.25 Aligned_cols=117 Identities=14% Similarity=0.117 Sum_probs=94.7
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc----CCCChhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT----DAGGTKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t----d~gG~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|.+.++.++. .+|..||++|..+ ...+++|||++|+|+|+. +.....+.+.+...|..++.++.
T Consensus 294 ~~~~~v~~~~~~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 294 DLPPNVEAHRWVPHV-KVLEQATVCVTHG------GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp CCCTTEEEESCCCHH-HHHHHEEEEEESC------CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred CCCCcEEEEecCCHH-HHHhhCCEEEECC------cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 345789999998777 9999999999665 346889999999999994 44456677777778988887755
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
+.+.|++++.++++|++.+++|++.+.+... ....+++++.+.+++..
T Consensus 367 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADPALLARVEAMRGHVRR-AGGAARAADAVEAYLAR 414 (415)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhhc
Confidence 6699999999999999999999887776554 57888888888877654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-11 Score=131.23 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=89.5
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCCcH
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHPGA 680 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~~~ 680 (732)
+++|.+ |+. +..++|..||++|..+ .+.+++|||++|+|+|+....+ ..+.+++...|++++..+.+.
T Consensus 263 ~~~v~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~ 334 (384)
T 2p6p_A 263 VPQARV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDST 334 (384)
T ss_dssp CTTSEE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCH
T ss_pred CCceEE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCH
Confidence 467888 987 4678999999999654 4568999999999999998754 666677667899988765566
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 681 QVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 681 e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+.++++|.++++|++.+++|++.+.+... .-..+.+++.+..++.
T Consensus 335 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 335 EAIADSCQELQAKDTYARRAQDLSREISG-MPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHT-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHhh
Confidence 99999999999999999999887766544 4567777666665543
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-11 Score=130.84 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=86.9
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCC-----CCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCc
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQG-----LGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~-----~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
+|+|+|+. ++++.+|+.+|+.++...+ +...+|.+++||||||+|||+++.++..|+|+++.+|++++ +.
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--~~- 291 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVK--DV- 291 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--SH-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--CH-
Confidence 89999976 7899999999988776220 01356999999999999999999999999999999999986 34
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKL 721 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~ 721 (732)
++++++|..+ +++.+++|++++++..++ +++..+.++.
T Consensus 292 -~e~~~~i~~l--~~~~~~~m~~na~~~a~~-~~~~~f~k~~ 329 (339)
T 3rhz_A 292 -EEAIMKVKNV--NEDEYIELVKNVRSFNPI-LRKGFFTRRL 329 (339)
T ss_dssp -HHHHHHHHHC--CHHHHHHHHHHHHHHTHH-HHTTHHHHHH
T ss_pred -HHHHHHHHHh--CHHHHHHHHHHHHHHHHH-hhccHHHHHH
Confidence 8899999887 467789999999987653 5555544443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-10 Score=126.14 Aligned_cols=116 Identities=13% Similarity=0.054 Sum_probs=94.5
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
+++++|.+.++.++ ..+|..||++|.. +.+.++.|||++|+|+|+....+ ..+.+++...|++++..+.
T Consensus 316 ~~~~~v~~~~~~~~-~~ll~~ad~~V~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 388 (441)
T 2yjn_A 316 NIPDNVRTVGFVPM-HALLPTCAATVHH------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPEL 388 (441)
T ss_dssp SCCSSEEECCSCCH-HHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTC
T ss_pred cCCCCEEEecCCCH-HHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccC
Confidence 34578999999876 7889999999954 35679999999999999998744 5666766678999887766
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+.+.|+++|.++++|++.+++|++.+.+.. +....+.+++.+.+++.
T Consensus 389 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 389 TPDQLRESVKRVLDDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 669999999999999999999988777655 45788888887777654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-09 Score=115.59 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=88.5
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCCc
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~~ 679 (732)
++++|.+.++..+. .+|..||++|..+ ..++++|||++|+|+|+....+ ..+.+++...|+.++..+.+
T Consensus 303 ~~~~v~~~~~~~~~-~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 375 (424)
T 2iya_A 303 VPPNVEVHQWVPQL-DILTKASAFITHA------GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVT 375 (424)
T ss_dssp CCTTEEEESSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred CCCCeEEecCCCHH-HHHhhCCEEEECC------chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCC
Confidence 45689999988777 8999999988543 4589999999999999998753 44556666789888766555
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
.+.++++|.++++|++.++++.+.+.+.. +....+++++.+.+++.
T Consensus 376 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 376 AEKLREAVLAVASDPGVAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 69999999999999998888877666543 34566666666666554
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.5e-11 Score=128.03 Aligned_cols=88 Identities=18% Similarity=0.174 Sum_probs=69.2
Q ss_pred CcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC-ChhhhhccCceEEEECCCCCcHHH
Q 004760 606 KAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG-GTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 606 ~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g-G~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
++|+++++. .++..+|+.||+++.+| |.++.||+++|+|||+.... +.+|.++.| ++++++. |. +.
T Consensus 263 ~~v~l~~~lg~~~~~~l~~~adlvvt~S-------Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d~--~~ 331 (385)
T 4hwg_A 263 DKIRFLPAFSFTDYVKLQMNAFCILSDS-------GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-KA--ER 331 (385)
T ss_dssp GGEEECCCCCHHHHHHHHHHCSEEEECC-------TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-SH--HH
T ss_pred CCEEEEcCCCHHHHHHHHHhCcEEEECC-------ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-CH--HH
Confidence 578887654 47899999999999666 23679999999999998663 467888776 6677653 44 89
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH
Q 004760 683 LAQNLRYLLKNPSVRERMAMEG 704 (732)
Q Consensus 683 La~aL~~LL~n~~~r~~m~~~~ 704 (732)
+++++..+++|+..+++|+.++
T Consensus 332 i~~ai~~ll~d~~~~~~m~~~~ 353 (385)
T 4hwg_A 332 VLQAVKTITEEHDNNKRTQGLV 353 (385)
T ss_dssp HHHHHHHHHTTCBTTBCCSCCC
T ss_pred HHHHHHHHHhChHHHHHhhccC
Confidence 9999999999988777665544
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.8e-09 Score=111.25 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=78.1
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|.+.++. +...+|..||+||. .+..+++.|||++|+|+|+....+ ..+.+++...|+..+..+.
T Consensus 285 ~~~~~v~~~~~~-p~~~lL~~~~~~v~------h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~ 357 (400)
T 4amg_A 285 ELPANVRVVEWI-PLGALLETCDAIIH------HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSL 357 (400)
T ss_dssp CCCTTEEEECCC-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTC
T ss_pred cCCCCEEEEeec-CHHHHhhhhhheec------cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCc
Confidence 566788888877 45688999999883 345678999999999999965543 5556666567888776665
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQ 723 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~e 723 (732)
.+++|+++++|++.++++++-+.+ +...-+....++.+.+
T Consensus 358 ----~~~al~~lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 358 ----GAEQCRRLLDDAGLREAALRVRQE-MSEMPPPAETAAXLVA 397 (400)
T ss_dssp ----SHHHHHHHHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHH
T ss_pred ----hHHHHHHHHcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHH
Confidence 678899999999988776554443 3444466555555543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-08 Score=106.66 Aligned_cols=112 Identities=18% Similarity=0.123 Sum_probs=80.7
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCCh----hhhhccCceEEEECCCCCc
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGT----KEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~----~EiVe~g~~Gll~~~~d~~ 679 (732)
..++|.+.++.+. ..++..||++|..+ ...++.|||++|+|+|+....+- .+.+++...|...+..+.+
T Consensus 266 ~~~~v~~~~~~~~-~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~ 338 (404)
T 3h4t_A 266 EGDDCLVVGEVNH-QVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPT 338 (404)
T ss_dssp CCTTEEEESSCCH-HHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred CCCCEEEecCCCH-HHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCC
Confidence 4578999998754 78999999999554 44789999999999999866543 3345555678888776666
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVI 725 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~ 725 (732)
.+.+++++.++++ ++.+++|.+.+.... + -..+++++.+.+++
T Consensus 339 ~~~l~~ai~~ll~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 339 VESLSAALATALT-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHHHHTS-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHH
Confidence 7999999999999 887777765554322 1 34444555444443
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-07 Score=101.48 Aligned_cols=115 Identities=11% Similarity=0.027 Sum_probs=85.1
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|.+.++.++ .++|..||++|..+ ...++.|||++|+|+|+....+ ..+.+++...|+.++..+.
T Consensus 282 ~~~~~v~~~~~~~~-~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 282 DDGADCFAIGEVNH-QVLFGRVAAVIHHG------GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp SCGGGEEECSSCCH-HHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred CCCCCEEEeCcCCh-HHHHhhCCEEEeCC------ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 34568999998866 46789999999644 4479999999999999987754 5566666678998877655
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.+.++++|.++ .|++.++++.+.+.+ +....-.++..+.++.+++
T Consensus 355 ~~~~l~~~i~~l-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 355 TFDSLSAALATA-LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp CHHHHHHHHHHH-TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHH-cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHh
Confidence 669999999999 998887777655543 3334445555555555544
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.5e-09 Score=101.90 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=73.0
Q ss_pred CCCcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC----ChhhhhccCceEEEECCCC
Q 004760 604 LSKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG----GTKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g----G~~EiVe~g~~Gll~~~~d 677 (732)
++++|.+.|+.++ ..++ .+||++|..+ .+.+++|||++|+|+|+.... +..+.+++...|++++..+
T Consensus 66 ~~~~v~~~~~~~~-~~~l~~~~ad~~I~~~------G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~ 138 (170)
T 2o6l_A 66 LGLNTRLYKWIPQ-NDLLGHPKTRAFITHG------GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNT 138 (170)
T ss_dssp CCTTEEEESSCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTT
T ss_pred CCCcEEEecCCCH-HHHhcCCCcCEEEEcC------CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEecccc
Confidence 4568999998865 5667 9999999543 568999999999999999874 3566777778999998775
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERM 700 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m 700 (732)
.+.+.|+++|.+++.|++.++.+
T Consensus 139 ~~~~~l~~~i~~ll~~~~~~~~a 161 (170)
T 2o6l_A 139 MSSTDLLNALKRVINDPSYKENV 161 (170)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHHHH
Confidence 56699999999999998755554
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.86 E-value=4.3e-09 Score=121.22 Aligned_cols=118 Identities=10% Similarity=0.063 Sum_probs=88.6
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhc------cCceEE-EE
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVE------HNVTGL-LH 673 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe------~g~~Gl-l~ 673 (732)
|+.++|.|.|.. .+....|+.||+++.|+. .+.|++++|||+||+|||+....+...-+. -|..++ +.
T Consensus 496 GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp---y~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA 572 (631)
T 3q3e_A 496 YLGDSATAHPHSPYHQYLRILHNCDMMVNPFP---FGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA 572 (631)
T ss_dssp HHGGGEEEECCCCHHHHHHHHHTCSEEECCSS---SCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCccEEEcCCCCHHHHHHHHhcCcEEEeCCc---ccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec
Confidence 666799999975 577899999999999995 456999999999999999987776665543 234443 43
Q ss_pred CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHhh
Q 004760 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER--MYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 674 ~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~--~ys~~~~~~~~~ev~~~~l 729 (732)
. +. +++++...+|..|++.+++|+++.++.... .|+ ...++|.+.|+.++
T Consensus 573 ~--d~--eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 573 N--TV--DEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp S--SH--HHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred C--CH--HHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 3 33 889999999999999999999988877533 343 34455555555443
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.71 E-value=5e-07 Score=106.28 Aligned_cols=203 Identities=14% Similarity=0.171 Sum_probs=137.6
Q ss_pred HHHHhCCC--CCCEEEEEEecCCCCCCHHH-HHHHHHHhHH--hCCCCchhhhhhccccccccccccccccccccccccc
Q 004760 433 VRKEMGLT--DQDMLVLSLSSINPGKGQLL-LVESAQLMIE--QEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQM 507 (732)
Q Consensus 433 ~R~~lgl~--~~~~lil~vGri~~~KG~d~-LLeA~~~l~~--~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~ 507 (732)
+++++|+. ++.++++++.|+..+|++++ ++..+.++.+ +.|..
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~-------------------------------- 551 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLT-------------------------------- 551 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCC--------------------------------
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCC--------------------------------
Confidence 57888875 45688999999999999999 8999888864 33320
Q ss_pred cccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch-hhhhHhhhhhccCCCCC
Q 004760 508 SDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK-QQQALKILIGSVGSKSN 586 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~-~~~~Lk~li~~~G~~~~ 586 (732)
......+++.|.|. ....-|.+|.
T Consensus 552 ------------------------------------------------~~~p~q~If~GKA~P~y~~aK~iIk------- 576 (796)
T 2c4m_A 552 ------------------------------------------------DIPARTVIFGAKAAPGYVRAKAIIK------- 576 (796)
T ss_dssp ------------------------------------------------SSCCEEEEEECCCCTTCHHHHHHHH-------
T ss_pred ------------------------------------------------CCCCeEEEEEecCCHhHHHHHHHHH-------
Confidence 00125678888884 3333333331
Q ss_pred ChhhHHHHHHHHHhcCCCCC--cEEEcc-ch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh
Q 004760 587 KVPYVKEILEFLSQHSNLSK--AMLWTP-AT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE 662 (732)
Q Consensus 587 ~~~y~k~il~~l~~~l~l~~--~V~f~G-~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E 662 (732)
.+..+.+.+-+....++ +|.|+. +- +-...++.+||++++||+.-.|+.|+.-+=||..|++.|++-.|...|
T Consensus 577 ---~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvE 653 (796)
T 2c4m_A 577 ---LINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVE 653 (796)
T ss_dssp ---HHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHH
T ss_pred ---HHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEee
Confidence 11222233333445667 788775 43 456688999999999997559999999999999999999999999999
Q ss_pred hhcc--CceEEEECCCCCcHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 663 IVEH--NVTGLLHPPGHPGAQVLAQN---LRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 663 iVe~--g~~Gll~~~~d~~~e~La~a---L~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.++ ..||++|......++++... ......+|. .+++.+++. ...|+|..- ..|.++|..++.
T Consensus 654 i~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~-~~~vvd~~~---~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 654 IVDSVGEENAYIFGARVEELPALRESYKPYELYETVPG-LKRALDALD---NGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp HHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTT-HHHHHHTTT---SSSSCCTTC-CHHHHHHHHHHS
T ss_pred hhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHH-HHHHHHHHH---cCCCCCCCH-HHHHHHHHHHHh
Confidence 8765 36999997743433565542 223334553 344433333 356888765 668888877753
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.54 E-value=2.7e-06 Score=100.45 Aligned_cols=199 Identities=15% Similarity=0.168 Sum_probs=132.1
Q ss_pred HHHHhCCC--CCCEEEEEEecCCCCCCHHHH-HHHHHHhHH--hCCCCchhhhhhccccccccccccccccccccccccc
Q 004760 433 VRKEMGLT--DQDMLVLSLSSINPGKGQLLL-VESAQLMIE--QEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQM 507 (732)
Q Consensus 433 ~R~~lgl~--~~~~lil~vGri~~~KG~d~L-LeA~~~l~~--~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~ 507 (732)
+++++|+. ++.++++++.|+..+|+++++ +..+.++.+ ..|..
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~-------------------------------- 585 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNK-------------------------------- 585 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTS--------------------------------
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCC--------------------------------
Confidence 66778875 456889999999999999998 888887752 33330
Q ss_pred cccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch-hhhhHhhhhhccCCCCC
Q 004760 508 SDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK-QQQALKILIGSVGSKSN 586 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~-~~~~Lk~li~~~G~~~~ 586 (732)
......+++.|.|. ....-|.+|.
T Consensus 586 ------------------------------------------------~~~p~q~If~GKA~P~y~~aK~iIk------- 610 (824)
T 2gj4_A 586 ------------------------------------------------FVVPRTVMIGGKAAPGYHMAKMIIK------- 610 (824)
T ss_dssp ------------------------------------------------CCCCEEEEEECCCCTTCHHHHHHHH-------
T ss_pred ------------------------------------------------CCCCEEEEEEEeCCHhHHHHHHHHH-------
Confidence 00124678888884 3333333331
Q ss_pred ChhhHHHHHHHHHhcCCCCC--cEEEcc-ch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh
Q 004760 587 KVPYVKEILEFLSQHSNLSK--AMLWTP-AT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE 662 (732)
Q Consensus 587 ~~~y~k~il~~l~~~l~l~~--~V~f~G-~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E 662 (732)
.+..+.+.+.+...+++ +|.|+. +- +-...++.+||++++||+.-.|+.|+.-+=||..|++.|++-.|...|
T Consensus 611 ---li~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvE 687 (824)
T 2gj4_A 611 ---LITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVE 687 (824)
T ss_dssp ---HHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHH
T ss_pred ---HHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccch
Confidence 11222222323344566 788775 43 446688999999999998559999999999999999999999898888
Q ss_pred hhc--cCceEEEECCCCCcHHHHHHHHH-------HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 663 IVE--HNVTGLLHPPGHPGAQVLAQNLR-------YLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 663 iVe--~g~~Gll~~~~d~~~e~La~aL~-------~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
+.+ ...||+++... . +++ ..++ .+++++...+++-++. +...|+|..- +.|.++|..++
T Consensus 688 i~e~vG~~Ngf~FG~~-~--~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i---~~g~fs~~~~-~~y~~ly~~l~ 755 (824)
T 2gj4_A 688 MAEEAGEENFFIFGMR-V--EDV-DRLDQRGYNAQEYYDRIPELRQIIEQL---SSGFFSPKQP-DLFKDIVNMLM 755 (824)
T ss_dssp HHHHHCGGGSEECSCC-H--HHH-HHHHHHCCCHHHHHHHCHHHHHHHHHH---HHTTTCTTST-TTTHHHHHHHH
T ss_pred hhhccCCCCEEEeCCc-H--HHH-HHHHHcCCCHHHHhcCCHHHHHHHHHH---HhCCCCCCCh-HHHHHHHHHHH
Confidence 875 34689999765 2 555 3332 2333333344444443 3467888665 66777776664
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=5.1e-06 Score=97.86 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=137.3
Q ss_pred HHHHhCCCC--CCEEEEEEecCCCCCCHHH-HHHHHHHhHHh--CCCCchhhhhhccccccccccccccccccccccccc
Q 004760 433 VRKEMGLTD--QDMLVLSLSSINPGKGQLL-LVESAQLMIEQ--EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQM 507 (732)
Q Consensus 433 ~R~~lgl~~--~~~lil~vGri~~~KG~d~-LLeA~~~l~~~--~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~ 507 (732)
+++++|+.- +.++++++.|+..+|++++ ++..+.++.+- .|..
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~-------------------------------- 561 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQA-------------------------------- 561 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTC--------------------------------
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCC--------------------------------
Confidence 688888754 5688999999999999999 89988887541 2220
Q ss_pred cccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch-hhhhHhhhhhccCCCCC
Q 004760 508 SDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK-QQQALKILIGSVGSKSN 586 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~-~~~~Lk~li~~~G~~~~ 586 (732)
......+++.|.|. ....-|.+|.
T Consensus 562 ------------------------------------------------~~~p~q~If~GKA~P~y~~aK~iIk------- 586 (796)
T 1l5w_A 562 ------------------------------------------------DRVPRVFLFGAKAAPGYYLAKNIIF------- 586 (796)
T ss_dssp ------------------------------------------------CCCCEEEEEECCCCTTCHHHHHHHH-------
T ss_pred ------------------------------------------------CCCCeEEEEEecCChhHHHHHHHHH-------
Confidence 00125678888884 3333333331
Q ss_pred ChhhHHHHHHHHHhcCCCCC--cEEEcc-ch-hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh
Q 004760 587 KVPYVKEILEFLSQHSNLSK--AMLWTP-AT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE 662 (732)
Q Consensus 587 ~~~y~k~il~~l~~~l~l~~--~V~f~G-~~-~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E 662 (732)
.+..+.+.+-+....++ +|.|+. +- +-...++.+||++++||+.-.|+.|+.-+=||..|++.|++-.|...|
T Consensus 587 ---~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvE 663 (796)
T 1l5w_A 587 ---AINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVE 663 (796)
T ss_dssp ---HHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHH
T ss_pred ---HHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeee
Confidence 11222233333445667 788886 33 456688999999999997559999999999999999999999999999
Q ss_pred hhcc--CceEEEECCCCCcHHHHHH-------HHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 663 IVEH--NVTGLLHPPGHPGAQVLAQ-------NLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 663 iVe~--g~~Gll~~~~d~~~e~La~-------aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.++ ..||+++.. +. +++.+ +......+| ..+++.+++. ...|+|..- ..|.++|..++.
T Consensus 664 i~e~vG~~NgF~FG~-~~--~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 664 IAEKVGEENIFIFGH-TV--EQVKAILAKGYDPVKWRKKDK-VLDAVLKELE---SGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp HHHHHCGGGSEECSC-CH--HHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHH---HTTTTTTCT-TTTHHHHHHTST
T ss_pred hhhccCCCcEEEecC-CH--HHHHHHHHcccCHHHHhhcCH-HHHHHHHHHH---cCCCCCCcH-HHHHHHHHHHhc
Confidence 8765 369999976 33 45442 222333455 3444544444 357998775 778888888764
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=97.84 E-value=4.3e-05 Score=82.59 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=74.9
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
.+++++.+.++.+ ..++|..||++|..+ ...++.|||++|+|+|+....+ ..+.+++...|+.++..+.
T Consensus 283 ~~~~~v~~~~~~~-~~~ll~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 355 (416)
T 1rrv_A 283 DDRDDCFAIDEVN-FQALFRRVAAVIHHG------SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (416)
T ss_dssp CCCTTEEEESSCC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred CCCCCEEEeccCC-hHHHhccCCEEEecC------ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCC
Confidence 4556889999875 578899999999533 4579999999999999976643 4555666678888876665
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGR 705 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r 705 (732)
+.+.++++|.++ .|++.++++++.+.
T Consensus 356 ~~~~l~~~i~~l-~~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 356 TFESLSAALTTV-LAPETRARAEAVAG 381 (416)
T ss_dssp CHHHHHHHHHHH-TSHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHh-hCHHHHHHHHHHHH
Confidence 669999999999 99988887766544
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0003 Score=82.84 Aligned_cols=121 Identities=11% Similarity=0.078 Sum_probs=89.3
Q ss_pred CC-CCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhh-----hhcc-CceEEEE
Q 004760 603 NL-SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKE-----IVEH-NVTGLLH 673 (732)
Q Consensus 603 ~l-~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~E-----iVe~-g~~Gll~ 673 (732)
|+ .++|+|.+.. .+....|..+|+++-|. .-+-+.+..||+.+|+|||+-....+.. ++.. |..-++.
T Consensus 576 gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~---p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 576 GLPQNRIIFSPVAPKEEHVRRGQLADVCLDTP---LCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp TCCGGGEEEEECCCHHHHHHHGGGCSEEECCS---SSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC
T ss_pred CCCcCeEEECCCCCHHHHHHHhCCCeEEeCCC---CcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc
Confidence 55 3789999854 67778899999999877 3467899999999999999865322111 1111 1112222
Q ss_pred CCCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHhhc
Q 004760 674 PPGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVER--MYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 674 ~~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~--~ys~~~~~~~~~ev~~~~l~ 730 (732)
.+. ++..+.-.+|..|++.+.++...-++.... -|+-..+++.+.+.|+.+.+
T Consensus 653 --~~~--~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 653 --KNR--QEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp --SSH--HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred --CCH--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 233 788888889999999999998888777654 68999999999999988753
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.01 Score=65.83 Aligned_cols=95 Identities=17% Similarity=0.121 Sum_probs=70.0
Q ss_pred CcEEEccchhhHHHHHH--HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccC-ceEEEECCCCC
Q 004760 606 KAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHN-VTGLLHPPGHP 678 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lys--aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g-~~Gll~~~~d~ 678 (732)
+++...++..+. .+|. ++|+||. -+..+++.||+++|+|+|+-...+ ....+++. ..|+.++.++.
T Consensus 325 ~~~~v~~w~pq~-~vL~h~~~~~fvt------h~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~ 397 (456)
T 2c1x_A 325 GYGMVVPWAPQA-EVLAHEAVGAFVT------HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397 (456)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred CceEEecCCCHH-HHhcCCcCCEEEe------cCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCc
Confidence 567777877664 6888 6778883 346679999999999999986643 34455555 68888876666
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRERMAMEGRKKV 708 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~m~~~~r~~v 708 (732)
+.+.+++++++++.|++ .++|.+++++..
T Consensus 398 ~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~ 426 (456)
T 2c1x_A 398 TKSGLMSCFDQILSQEK-GKKLRENLRALR 426 (456)
T ss_dssp CHHHHHHHHHHHHHSHH-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCc-HHHHHHHHHHHH
Confidence 67999999999999985 455666555543
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.046 Score=60.94 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=70.4
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccC-ceEEEECCCCCc
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHN-VTGLLHPPGHPG 679 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g-~~Gll~~~~d~~ 679 (732)
.+++...++..+ ..+++.+++.++-++ +.-++++||+++|+|+|+-...+ ....+++. ..|+.++.++.+
T Consensus 326 ~~~~~vv~w~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~ 400 (454)
T 3hbf_A 326 KTKGKIVAWAPQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLT 400 (454)
T ss_dssp TTTEEEESSCCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCC
T ss_pred CCceEEEeeCCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCC
Confidence 457777788766 589999996555554 34578999999999999976643 33455553 688888776667
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKK 707 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~ 707 (732)
.+.+++++++++++++ .++|.+++++.
T Consensus 401 ~~~l~~av~~ll~~~~-~~~~r~~a~~l 427 (454)
T 3hbf_A 401 KESIKKALELTMSSEK-GGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHHHHHHHSSHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCh-HHHHHHHHHHH
Confidence 7999999999998852 34455554443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.041 Score=61.10 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=69.8
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhh-ccCceEEEECCCCCc
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIV-EHNVTGLLHPPGHPG 679 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiV-e~g~~Gll~~~~d~~ 679 (732)
++++.+.++..+. .+|+.+++-++-++ +-.+++.||+++|+|+|+-...+ ....+ +....|+.++ .+.+
T Consensus 352 ~~~~~v~~~~pq~-~~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~ 425 (482)
T 2pq6_A 352 ADRGLIASWCPQD-KVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVK 425 (482)
T ss_dssp TTTEEEESCCCHH-HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCC
T ss_pred CCCEEEEeecCHH-HHhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCC
Confidence 3577888887665 58977666333343 46679999999999999987643 33334 3456788876 5566
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVE 709 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~ 709 (732)
.+.++++|++++.|++ .++|.+++++..+
T Consensus 426 ~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~ 454 (482)
T 2pq6_A 426 REELAKLINEVIAGDK-GKKMKQKAMELKK 454 (482)
T ss_dssp HHHHHHHHHHHHTSHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCc-HHHHHHHHHHHHH
Confidence 7999999999999986 3566666655443
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.31 Score=53.90 Aligned_cols=87 Identities=21% Similarity=0.188 Sum_probs=61.5
Q ss_pred CcEEEccchhhHHHHHH--HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhh-hccCceEEEE-C---
Q 004760 606 KAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEI-VEHNVTGLLH-P--- 674 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lys--aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~Ei-Ve~g~~Gll~-~--- 674 (732)
+++...++..+. .+|. ++|+||.- +-.++++||+++|+|+|+-...+ .... ++....|+.+ .
T Consensus 332 ~~~~v~~w~pq~-~vL~h~~~~~fvth------~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~ 404 (463)
T 2acv_A 332 GKGMICGWAPQV-EVLAHKAIGGFVSH------CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 404 (463)
T ss_dssp CSEEEESSCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred CCEEEEccCCHH-HHhCCCccCeEEec------CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC
Confidence 456677777665 5676 67788833 46679999999999999987643 3344 4566688887 2
Q ss_pred CC--CCcHHHHHHHHHHHhc-CHHHHHH
Q 004760 675 PG--HPGAQVLAQNLRYLLK-NPSVRER 699 (732)
Q Consensus 675 ~~--d~~~e~La~aL~~LL~-n~~~r~~ 699 (732)
.+ +.+.+.++++|+++++ +++.+++
T Consensus 405 ~~~~~~~~~~l~~ai~~ll~~~~~~r~~ 432 (463)
T 2acv_A 405 KGSDVVAAEEIEKGLKDLMDKDSIVHKK 432 (463)
T ss_dssp TTCCCCCHHHHHHHHHHHTCTTCTHHHH
T ss_pred CCCccccHHHHHHHHHHHHhccHHHHHH
Confidence 23 4566999999999997 3454443
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.51 Score=50.21 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=36.7
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhh
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIV 664 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiV 664 (732)
.+.+.|.. .++..+++.||++|.+- .|..-+ |.|+|+|+|+--....+...
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~~~i~~D------sG~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 243 PIVATGKFQLGPLAAAMNRCNLLITND------SGPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp CEECTTCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred cEEeeCCCCHHHHHHHHHhCCEEEECC------CCHHHH-HHhcCCCEEEEECCCCcccc
Confidence 35666644 78999999999999775 355555 99999999996443334433
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.12 Score=53.78 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=32.5
Q ss_pred EEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC
Q 004760 608 MLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656 (732)
Q Consensus 608 V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td 656 (732)
+.+.|.. .++..+++.||++|.+.. |..-+ |.|+|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTNDS------GLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEESS------HHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecCC------HHHHH-HHHcCCCEEEEE
Confidence 4566754 799999999999998763 33444 999999999853
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.19 Score=55.92 Aligned_cols=79 Identities=11% Similarity=0.086 Sum_probs=57.0
Q ss_pred EEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhh-ccCceEEEECCC---CCcH
Q 004760 609 LWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIV-EHNVTGLLHPPG---HPGA 680 (732)
Q Consensus 609 ~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiV-e~g~~Gll~~~~---d~~~ 680 (732)
...++..+. .+++.+++.++-++ +--++++||+++|+|+|+-...+ ....+ +....|+..+.. ..+.
T Consensus 342 ~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~ 416 (480)
T 2vch_A 342 VIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRR 416 (480)
T ss_dssp EEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCH
T ss_pred EEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCH
Confidence 333455444 89999997554454 35578999999999999987643 33443 555678777654 4567
Q ss_pred HHHHHHHHHHhc
Q 004760 681 QVLAQNLRYLLK 692 (732)
Q Consensus 681 e~La~aL~~LL~ 692 (732)
+.++++|++++.
T Consensus 417 ~~l~~av~~vl~ 428 (480)
T 2vch_A 417 EEVARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999999998
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=93.76 E-value=0.17 Score=52.98 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=39.4
Q ss_pred CcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC
Q 004760 606 KAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA 657 (732)
Q Consensus 606 ~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~ 657 (732)
.++.+.++.++++++|++||+.|.+ .|.++.|++++|+|.|.-..
T Consensus 208 ~~v~v~~~~~~m~~~m~~aDlvI~~-------gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 208 NNIRLFIDHENIAKLMNESNKLIIS-------ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp SSEEEEESCSCHHHHHHTEEEEEEE-------SSHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEeCHHHHHHHHHHCCEEEEC-------CcHHHHHHHHcCCCEEEEeC
Confidence 3799999999999999999999973 24799999999999998654
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=90.59 E-value=0.12 Score=52.54 Aligned_cols=73 Identities=7% Similarity=-0.004 Sum_probs=51.9
Q ss_pred cEEEccchhhHHHHHH-HcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC----C----hhhhhccCceEEEECCCC
Q 004760 607 AMLWTPATTRVASLYS-AADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG----G----TKEIVEHNVTGLLHPPGH 677 (732)
Q Consensus 607 ~V~f~G~~~dv~~lys-aADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g----G----~~EiVe~g~~Gll~~~~d 677 (732)
++...++.+++..+|. .||++|.- +-..++.|++++|+|.|.-... . ..+.+++...+++. +
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsh------aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~ 185 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISH------AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---A 185 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEES------SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---C
T ss_pred eEEEeeccchHHHHHHhcCCEEEEC------CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---C
Confidence 5667788899999999 99999943 4677999999999999886543 2 13333332345555 2
Q ss_pred CcHHHHHHHHHHH
Q 004760 678 PGAQVLAQNLRYL 690 (732)
Q Consensus 678 ~~~e~La~aL~~L 690 (732)
+ +.|++++..+
T Consensus 186 ~--~~L~~~i~~l 196 (224)
T 2jzc_A 186 P--TETGLIAGLR 196 (224)
T ss_dssp S--CTTTHHHHHH
T ss_pred H--HHHHHHHHHH
Confidence 3 4577777776
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=88.23 E-value=4 Score=42.08 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=48.7
Q ss_pred EEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc-CceEEEEC-----CCCCc
Q 004760 608 MLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH-NVTGLLHP-----PGHPG 679 (732)
Q Consensus 608 V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~-g~~Gll~~-----~~d~~ 679 (732)
+.+.|.. .++..+++.||++|.+- -|..-+ |.|+|+|+|+--....++.... +....++. ..+.+
T Consensus 236 ~~l~g~~sl~el~ali~~a~l~I~~D------SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~ 308 (326)
T 2gt1_A 236 VEVLPKMSLEGVARVLAGAKFVVSVD------TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLT 308 (326)
T ss_dssp EEECCCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCC
T ss_pred ccccCCCCHHHHHHHHHhCCEEEecC------CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCC
Confidence 4566643 79999999999999775 345555 7789999998533222222211 11112221 12445
Q ss_pred HHHHHHHHHHHhcC
Q 004760 680 AQVLAQNLRYLLKN 693 (732)
Q Consensus 680 ~e~La~aL~~LL~n 693 (732)
+++..+++.+++++
T Consensus 309 ~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 309 ANAVKQFIEENAEK 322 (326)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHH
Confidence 57788888777764
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=83.15 E-value=2.8 Score=48.87 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=61.7
Q ss_pred CCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhh----------ccCceEEEEC
Q 004760 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIV----------EHNVTGLLHP 674 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiV----------e~g~~Gll~~ 674 (732)
.+.+.-.....++.++|..||++|.= ++-++.|++..++|||-...- ..+.. .+...|-++.
T Consensus 597 ~~~~~~~~~~~di~~ll~~aD~lITD-------ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~ 668 (729)
T 3l7i_A 597 ENFAIDVSNYNDVSELFLISDCLITD-------YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT 668 (729)
T ss_dssp TTTEEECTTCSCHHHHHHTCSEEEES-------SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES
T ss_pred CCcEEeCCCCcCHHHHHHHhCEEEee-------chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC
Confidence 34555555556899999999999942 455899999999999987321 11111 1112333333
Q ss_pred CCCCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 675 PGHPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 675 ~~d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+.++|.++|......+....+..+.-++..-. |.-.+.++++.+.+-
T Consensus 669 ----~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~ 715 (729)
T 3l7i_A 669 ----EPYGLAKELKNLDKVQQQYQEKIDAFYDRFCS-VDNGKASQYIGDLIH 715 (729)
T ss_dssp ----SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST-TCCSCHHHHHHHHHH
T ss_pred ----CHHHHHHHHhhhhccchhHHHHHHHHHHHhCC-ccCChHHHHHHHHHH
Confidence 23788888887765333322222222222211 333345555555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 732 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 7e-15 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 4e-13 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 2e-12 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 75.5 bits (184), Expect = 7e-15
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 24/151 (15%)
Query: 589 PYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF 648
++ L + + + + + D +I S+ E G + A+ +
Sbjct: 331 VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRF--EPCGLTQLYALRY 388
Query: 649 GVPVLGTDAGGTKEIV---------EHNVTGLLHPPGHPGAQVLAQNLRYLLK---NPSV 696
G + GG + V TG+ P L Q +R ++ +P +
Sbjct: 389 GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDG--LKQAIRRTVRYYHDPKL 446
Query: 697 RERMAMEGRKK---VERM---YLKKHMYKKL 721
+M G K E+ Y +Y +L
Sbjct: 447 WTQMQKLGMKSDVSWEKSAGLYAA--LYSQL 475
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 69.5 bits (168), Expect = 4e-13
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 600 QHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG 659
+ K + + V LY + D +I S E FG V +EAM G + + GG
Sbjct: 305 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGG 362
Query: 660 TKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMY 718
++I+ + TG+L G PG LA + L+ + S + +K+ + +
Sbjct: 363 LRDIITNE-TGILVKAGDPGE--LANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSA 418
Query: 719 KKLSQVIYKCM 729
++ + +
Sbjct: 419 ERYVKAYTGSI 429
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 66.9 bits (161), Expect = 2e-12
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 646 MAFGVPVLGTDAGGTKEIVEHNVTG-LLHPPGHPGAQVLAQNLRYLLKNPSVRERMAMEG 704
+ G+PVL T G + G ++ P L + LR L +R A
Sbjct: 290 ITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQ--LNEVLRKALTQSPLRMAWAENA 347
Query: 705 RKKVERMYLKKHMYKKLSQVI 725
R + L + +K + +I
Sbjct: 348 RHYADTQDLYS-LPEKAADII 367
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 54.9 bits (131), Expect = 2e-08
Identities = 20/153 (13%), Positives = 46/153 (30%), Gaps = 21/153 (13%)
Query: 564 SKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA 623
S+ D + Q ++ + + + N + + + +L +
Sbjct: 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKI--------FRY 350
Query: 624 ADVYVINSQGLGETFGRVTIEAMAFGVP-----VLGTDAGGTKEIVEHNVTGLLHPPGHP 678
+DV ++ L + V E +A P ++ + G + L+ P
Sbjct: 351 SDVGLVTP--LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDR 405
Query: 679 GAQVLAQNLRYLLKNP-SVRERMAMEGRKKVER 710
+A L L + R E + +
Sbjct: 406 DE--VAAALDRALTMSLAERISRHAEMLDVIVK 436
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.98 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.82 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.82 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.99 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.95 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.81 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.72 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 97.64 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.43 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 97.1 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 96.98 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 96.4 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 96.23 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 95.73 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 95.72 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 94.83 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 94.64 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 91.53 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 89.69 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 89.39 |
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-34 Score=296.82 Aligned_cols=339 Identities=17% Similarity=0.211 Sum_probs=235.2
Q ss_pred EEEEeC-CCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCch---------------hhh
Q 004760 245 FILIFH-ELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------FKT 308 (732)
Q Consensus 245 IllI~h-~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~---------------~~~ 308 (732)
|.|+++ ..-.||+++.+++||++|+++||+|++++....+... .+++++..+.... ...
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWVQNHLK 76 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC-----CceEEEEcCccccccchhhHHHHHHHHHHHH
Confidence 455554 4568999999999999999999999999965555432 4667666553322 223
Q ss_pred hcCccEEEeCCchhhH-------HHH-HHHHhhcCCCccEEEEEeechhHhH---HHhhhhhccccEEEEecHHhHHHhh
Q 004760 309 SMKADLVIAGSAVCAT-------WID-QYITRFPAGGSQVVWWIMENRREYF---DRAKLVLDRVKLLVFLSESQTKQWL 377 (732)
Q Consensus 309 ~~k~DlVia~Sav~~~-------~i~-~~i~~~~~~~~~ivw~i~e~r~~~~---~~~~~~l~r~~~li~vS~~~~~~~~ 377 (732)
..++|+|+.+...... ... ..+... .+. .+.++ .+...+ ..........+.++..++.....
T Consensus 77 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 149 (370)
T d2iw1a1 77 EHPADRVVGFNKMPGLDVYFAADVCYAEKVAQE-KGF---LYRLT-SRYRHYAAFERATFEQGKSTKLMMLTDKQIAD-- 149 (370)
T ss_dssp HSCCSEEEESSCCTTCSEEECCSCCHHHHHHHH-CCH---HHHTS-HHHHHHHHHHHHHHSTTCCCEEEESCHHHHHH--
T ss_pred hcccceeeecccCchHHHHHHhhcccceeeeee-cCc---ccccc-chhchhHHHHHHHHhhccCceEEEecHHHHHH--
Confidence 6789999876432110 000 001000 000 00000 011111 11111112355667776665332
Q ss_pred hHHHhhhhhccCCCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCC
Q 004760 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKG 457 (732)
Q Consensus 378 ~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG 457 (732)
+. ...+..+ ..+.+||||+|...+.+..... .++.+|+.+|++++.++++++|++.+.||
T Consensus 150 -~~----~~~~~~~-----------~~i~vi~~gv~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg 209 (370)
T d2iw1a1 150 -FQ----KHYQTEP-----------ERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFGRKG 209 (370)
T ss_dssp -HH----HHHCCCG-----------GGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTTTTT
T ss_pred -HH----HhcCCCc-----------ceEEEEEeecccccccccCchh----hhhhhhhccCCCccceEEEEEeccccccc
Confidence 11 1112222 2358999999988765443211 23678999999999999999999999999
Q ss_pred HHHHHHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCC
Q 004760 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (732)
Q Consensus 458 ~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~ 537 (732)
++.+++|++.+.++.++
T Consensus 210 ~~~li~a~~~l~~~~~~--------------------------------------------------------------- 226 (370)
T d2iw1a1 210 VDRSIEALASLPESLRH--------------------------------------------------------------- 226 (370)
T ss_dssp HHHHHHHHHTSCHHHHH---------------------------------------------------------------
T ss_pred hhhhccccccccccccc---------------------------------------------------------------
Confidence 99999999988665443
Q ss_pred CCCcccccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccchhhH
Q 004760 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (732)
Q Consensus 538 ~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~~dv 617 (732)
..++++|.++....++.++ +.++..++++|+|+++++
T Consensus 227 ----------------------~~~~ii~g~~~~~~~~~~~---------------------~~~~~~~~v~~~g~~~~~ 263 (370)
T d2iw1a1 227 ----------------------NTLLFVVGQDKPRKFEALA---------------------EKLGVRSNVHFFSGRNDV 263 (370)
T ss_dssp ----------------------TEEEEEESSSCCHHHHHHH---------------------HHHTCGGGEEEESCCSCH
T ss_pred ----------------------ceeeecccccccccccccc---------------------cccccccccccccccccc
Confidence 1233444443333343333 333778899999999999
Q ss_pred HHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEE-CCCCCcHHHHHHHHHHHhcCHHH
Q 004760 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLH-PPGHPGAQVLAQNLRYLLKNPSV 696 (732)
Q Consensus 618 ~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~-~~~d~~~e~La~aL~~LL~n~~~ 696 (732)
.++|++||++|+||. .|+||++++||||||+|||+|+.||.+|++.++.+|+++ +++|+ ++|+++|.+++.|++.
T Consensus 264 ~~~~~~adv~v~ps~--~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~--~~la~~i~~ll~d~~~ 339 (370)
T d2iw1a1 264 SELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQ--EQLNEVLRKALTQSPL 339 (370)
T ss_dssp HHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCH--HHHHHHHHHHHHCHHH
T ss_pred ccccccccccccccc--cccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCH--HHHHHHHHHHHcCHHH
Confidence 999999999999998 899999999999999999999999999999999999766 56777 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004760 697 RERMAMEGRKKVERMYLKKHMYKKLSQVIY 726 (732)
Q Consensus 697 r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~ 726 (732)
+++|+++|++.++. |++..+.+++.++|+
T Consensus 340 ~~~~~~~ar~~~~~-~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 340 RMAWAENARHYADT-QDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHHHHHHHHHH-SCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hChhHHHHHHHHHHh
Confidence 99999999999875 666666777777664
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.8e-33 Score=308.82 Aligned_cols=361 Identities=14% Similarity=0.144 Sum_probs=239.7
Q ss_pred eEEEEeCCCC----CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChh----------------------HHHhCCcEE
Q 004760 244 KFILIFHELS----MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP----------------------ELARRKIKV 297 (732)
Q Consensus 244 kIllI~h~ls----~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~----------------------el~~~gI~v 297 (732)
||++|+.|.. .||-..++.+||++|+++||+|.|+++. .+.+.. +....|+++
T Consensus 2 ~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG-YPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC-CHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred EEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecC-CcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 7999998864 4886678999999999999999999842 111000 011234444
Q ss_pred EEcCCCc-------------------h-------------h----hhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEE
Q 004760 298 LEDRGEP-------------------S-------------F----KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVV 341 (732)
Q Consensus 298 ~~~~~~~-------------------~-------------~----~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~iv 341 (732)
+..+... . + ....+||+||+|.... .+...++........+++
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~-~l~~~~~~~~~~~~ip~V 159 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA-AMTPVYMRYAETPEIPSL 159 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH-TTHHHHHHHSSSCCCCEE
T ss_pred EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhH-HHHHHHHHHhhCCCCCEE
Confidence 3211100 0 0 1135899999985322 222333333333334577
Q ss_pred EEEeech------hHh----------HH-----------HhhhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccc
Q 004760 342 WWIMENR------REY----------FD-----------RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVV 394 (732)
Q Consensus 342 w~i~e~r------~~~----------~~-----------~~~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v 394 (732)
+.+|... ... +. ..+......+.++++|....+.. +... .+....
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~--~~~~----~~~~~~-- 231 (477)
T d1rzua_ 160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEI--LTAE----FGMGLE-- 231 (477)
T ss_dssp EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHT--TSHH----HHTTCH--
T ss_pred EEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHH--HHHh----cCcchh--
Confidence 7776421 000 00 00111223677888887753320 0000 000000
Q ss_pred cccCCCccceEEeecCCCCCCCCCchhhH-----------HHhHHhHHHHHHHhCCCCC-CEEEEEEecCCCCCCHHHHH
Q 004760 395 PLSVNDELAFVAGFTCSLNTPTSSPEKMR-----------EKRNLLRDSVRKEMGLTDQ-DMLVLSLSSINPGKGQLLLV 462 (732)
Q Consensus 395 ~l~~n~~~~~v~vIpngvd~~~f~~~~~~-----------ekr~~~r~~~R~~lgl~~~-~~lil~vGri~~~KG~d~LL 462 (732)
.+. ......+.+|+||+|...|.|+... .........++...+++++ .++|+++||+.+.||++.|+
T Consensus 232 ~~~-~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll 310 (477)
T d1rzua_ 232 GVI-GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMA 310 (477)
T ss_dssp HHH-HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHH
T ss_pred hhh-hhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHH
Confidence 000 0012245899999999988764221 0112234567788888765 46899999999999999999
Q ss_pred HHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcc
Q 004760 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (732)
Q Consensus 463 eA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf 542 (732)
+|+..+.++.+
T Consensus 311 ~a~~~~~~~~~--------------------------------------------------------------------- 321 (477)
T d1rzua_ 311 EAVDEIVSLGG--------------------------------------------------------------------- 321 (477)
T ss_dssp TTHHHHHHTTC---------------------------------------------------------------------
T ss_pred HHHHHHHhhCC---------------------------------------------------------------------
Confidence 99999865532
Q ss_pred cccCCCCccccCCcccceeEEeccCchhhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHH
Q 004760 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASL 620 (732)
Q Consensus 543 ~~~~~~d~v~iG~~~~~~~LlivG~G~~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~l 620 (732)
+++++|.|+.....+... +.. ++.++|.|++.. +.+..+
T Consensus 322 ------------------~l~~~G~G~~~~~~~~~~-------------------~~~--~~~~~v~~~~~~~~~~~~~~ 362 (477)
T d1rzua_ 322 ------------------RLVVLGAGDVALEGALLA-------------------AAS--RHHGRVGVAIGYNEPLSHLM 362 (477)
T ss_dssp ------------------EEEEEECBCHHHHHHHHH-------------------HHH--HTTTTEEEEESCCHHHHHHH
T ss_pred ------------------eEEEEecCCchHHHHHHH-------------------HHh--hcCCeEEEEcccChhHHHHH
Confidence 356677775443322221 111 345788888755 557789
Q ss_pred HHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCc---------eEEEECCCCCcHHHHHHHHHHHh
Q 004760 621 YSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNV---------TGLLHPPGHPGAQVLAQNLRYLL 691 (732)
Q Consensus 621 ysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~---------~Gll~~~~d~~~e~La~aL~~LL 691 (732)
|++||++|+||. .|+||++++||||||+|||+|+.||++|+|.++. +|+++++.|+ ++|+++|.+++
T Consensus 363 ~~~aD~~v~PS~--~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~--~~la~ai~~~l 438 (477)
T d1rzua_ 363 QAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTL--DGLKQAIRRTV 438 (477)
T ss_dssp HHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSH--HHHHHHHHHHH
T ss_pred HHhCccccCCcc--ccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCH--HHHHHHHHHHH
Confidence 999999999998 8999999999999999999999999999998754 8999999998 99999998776
Q ss_pred c---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 692 K---NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 692 ~---n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+ |++.+++|++++. +++|||++++++++++|++++.
T Consensus 439 ~~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 439 RYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHHHTC
T ss_pred hhhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHHHhC
Confidence 5 8999999988874 4579999999999999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.98 E-value=5.9e-31 Score=279.51 Aligned_cols=356 Identities=17% Similarity=0.214 Sum_probs=240.5
Q ss_pred eEEEEeCCCC---CCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhH-----------------HHhCCcEEEEcCCC
Q 004760 244 KFILIFHELS---MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-----------------LARRKIKVLEDRGE 303 (732)
Q Consensus 244 kIllI~h~ls---~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~e-----------------l~~~gI~v~~~~~~ 303 (732)
||++|+.+.- .||++.++.+||++|+++||+|+|++........+. ....++.++.....
T Consensus 2 kIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (437)
T d2bisa1 2 KVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGG 81 (437)
T ss_dssp EEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEESS
T ss_pred EEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCcc
Confidence 8999997543 599999999999999999999999985432210000 01123333322111
Q ss_pred c---------h----------------------hhhhcCccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeechh---
Q 004760 304 P---------S----------------------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR--- 349 (732)
Q Consensus 304 ~---------~----------------------~~~~~k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~r~--- 349 (732)
. . ......||+||+|+... .+...++... .+.+ +++.+|....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~-~~~~~~~~~~-~~~~-~v~~~h~~~~~~~ 158 (437)
T d2bisa1 82 LLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAGALIKKY-FKIP-AVFTIHRLNKSKL 158 (437)
T ss_dssp GGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGG-HHHHHHHHHH-HCCC-EEEEESSCCCCCE
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhh-hhHhhhhhcc-ccCc-eeEEEeecccccc
Confidence 0 0 01134689999987543 3333333333 3444 6777764321
Q ss_pred --HhHHHh--------------hhhhccccEEEEecHHhHHHhhhHHHhhhhhccCCCccccccCCCccceEEeecCCCC
Q 004760 350 --EYFDRA--------------KLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLN 413 (732)
Q Consensus 350 --~~~~~~--------------~~~l~r~~~li~vS~~~~~~~~~~~~~e~i~l~~~~~~v~l~~n~~~~~v~vIpngvd 413 (732)
.++... +......+.+++.+...... .+ ..++..+ ..+.+||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~--~~-----~~~~~~~-----------~ki~vi~~g~d 220 (437)
T d2bisa1 159 PAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLID--EW-----GFFRNFE-----------GKITYVFNGID 220 (437)
T ss_dssp EHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHH--TH-----HHHGGGT-----------TTEEECCCCCC
T ss_pred chhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhh--hh-----hhhcccc-----------CceEEEecccc
Confidence 111110 00111145566666654221 00 0111111 13489999999
Q ss_pred CCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhcccccccccc
Q 004760 414 TPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSS 492 (732)
Q Consensus 414 ~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~ 492 (732)
.+.|.+......+...+..++.++++.+ ++.++++|++. +.||++.+++|+..+..+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~------------------ 281 (437)
T d2bisa1 221 CSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF------------------ 281 (437)
T ss_dssp TTTSCGGGCCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG------------------
T ss_pred cccccccccchhhHHHHHhhhhhhhccC-CceEEEeecccccchhHHHHHhhhccccccccc------------------
Confidence 9988764321111223367888999865 57889999986 579999999999988433211
Q ss_pred ccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCchhhh
Q 004760 493 LTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQ 572 (732)
Q Consensus 493 ~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~~~~ 572 (732)
+..+++++|.|+...
T Consensus 282 -----------------------------------------------------------------~~~~lvi~G~~~~~~ 296 (437)
T d2bisa1 282 -----------------------------------------------------------------QEMRFIIIGKGDPEL 296 (437)
T ss_dssp -----------------------------------------------------------------GGEEEEEECCBCHHH
T ss_pred -----------------------------------------------------------------ccceeeeeccccccc
Confidence 124678888885432
Q ss_pred hHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCC
Q 004760 573 ALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV 650 (732)
Q Consensus 573 ~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~Gl 650 (732)
. ...+.+.+ .....+.+.|.. +++..+|++||++++||. .|++|++++||||||+
T Consensus 297 ~-------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~--~e~~~~~~~Eama~G~ 353 (437)
T d2bisa1 297 E-------------------GWARSLEE--KHGNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGA 353 (437)
T ss_dssp H-------------------HHHHHHHH--TCTTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHTTTC
T ss_pred c-------------------cchhhhcc--ccccceeccccCcHHHHHHHHhhhcccccccc--ccccchHHHHHHHCCC
Confidence 2 11122222 334566777754 779999999999999998 9999999999999999
Q ss_pred CEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 651 PVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 651 PVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
|||+|+.||..|++++ .+|+++++.|+ ++|+++|.++++ |++.+++|++++++.++ .|||++++++++++|++++
T Consensus 354 Pvi~~~~g~~~e~i~~-~~G~~~~~~d~--~~la~~i~~ll~~~~~~~~~~~~~~~~~~~-~~s~~~~a~~~~~iY~~~i 429 (437)
T d2bisa1 354 IPIASAVGGLRDIITN-ETGILVKAGDP--GELANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTGSI 429 (437)
T ss_dssp EEEEESCTTHHHHCCT-TTCEEECTTCH--HHHHHHHHHHHTTTTSCTHHHHHHHHHHHH-HSCHHHHHHHHHHHHHTCS
T ss_pred CEEEeCCCCcHHhEEC-CcEEEECCCCH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 9999999999999986 58999999988 999999999887 77889999999999886 5999999999999999988
Q ss_pred cC
Q 004760 730 KP 731 (732)
Q Consensus 730 ~~ 731 (732)
+.
T Consensus 430 ~r 431 (437)
T d2bisa1 430 DR 431 (437)
T ss_dssp CC
T ss_pred Hh
Confidence 64
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=7e-24 Score=206.32 Aligned_cols=192 Identities=19% Similarity=0.306 Sum_probs=148.6
Q ss_pred CCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhHHhCCCCchhhhhhccccccc
Q 004760 411 SLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRK 489 (732)
Q Consensus 411 gvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~-~~KG~d~LLeA~~~l~~~~p~~~~~~~~~~~~i~~~ 489 (732)
|+|++.|.|......+.-.+..+++.+|++ ++.+|+++||+. ++||++.+++|++.+.++.+.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--------------- 64 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--------------- 64 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG---------------
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC---------------
Confidence 688888876532111112347889999995 566789999996 699999999999998544322
Q ss_pred cccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCcccccCCCCccccCCcccceeEEeccCch
Q 004760 490 KSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGK 569 (732)
Q Consensus 490 ~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~lf~~~~~~d~v~iG~~~~~~~LlivG~G~ 569 (732)
+..+++++|.|.
T Consensus 65 --------------------------------------------------------------------~~~~l~i~G~g~ 76 (196)
T d2bfwa1 65 --------------------------------------------------------------------QEMRFIIIGKGD 76 (196)
T ss_dssp --------------------------------------------------------------------GGEEEEEECCBC
T ss_pred --------------------------------------------------------------------CCeEEEEEeecc
Confidence 224677888874
Q ss_pred hhhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHH
Q 004760 570 QQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMA 647 (732)
Q Consensus 570 ~~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA 647 (732)
... +...+.+.+. ....+.+.|.. +++..+|+.||++|+||. .|++|++++|||+
T Consensus 77 ~~~-------------------~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~ 133 (196)
T d2bfwa1 77 PEL-------------------EGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMC 133 (196)
T ss_dssp HHH-------------------HHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHH
T ss_pred cch-------------------hhhhhhhhhc--cceeEEeeeccccccchhccccccccccccc--cccccccchhhhh
Confidence 321 1111222222 23455666654 689999999999999998 9999999999999
Q ss_pred cCCCEEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcC
Q 004760 648 FGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRYLLK-NPSVRERMAMEGRKKVERMYL 713 (732)
Q Consensus 648 ~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~LL~-n~~~r~~m~~~~r~~v~~~ys 713 (732)
||+|||+++.|++.|++.+ .+|++++++|+ ++|+++|.++++ +++.+++|+++|++++.+ ||
T Consensus 134 ~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~--~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs 196 (196)
T d2bfwa1 134 LGAIPIASAVGGLRDIITN-ETGILVKAGDP--GELANAILKALELSRSDLSKFRENCKKRAMS-FS 196 (196)
T ss_dssp TTCEEEEESCHHHHHHCCT-TTCEEECTTCH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred cCceeeecCCCccceeecC-CceeeECCCCH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence 9999999999999999976 58999999988 999999999887 789999999999999875 75
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.82 E-value=1.6e-20 Score=178.19 Aligned_cols=87 Identities=29% Similarity=0.439 Sum_probs=80.3
Q ss_pred CCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhccCceEEEECCCCCcHHH
Q 004760 605 SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEHNVTGLLHPPGHPGAQV 682 (732)
Q Consensus 605 ~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~g~~Gll~~~~d~~~e~ 682 (732)
.++|+|+|++ +++..+|+.||++|+||. .|+||++++|||+||+|||+++.++..|++.++.+|++++. |+ ++
T Consensus 66 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~--~~ 140 (166)
T d2f9fa1 66 PDNVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DV--NE 140 (166)
T ss_dssp CTTEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CH--HH
T ss_pred cCcEEEeecccccccccccccccccccccc--cccccccccccccccccceeecCCcceeeecCCcccccCCC-CH--HH
Confidence 4689999987 679999999999999998 99999999999999999999999999999999999998764 55 99
Q ss_pred HHHHHHHHhcCHHH
Q 004760 683 LAQNLRYLLKNPSV 696 (732)
Q Consensus 683 La~aL~~LL~n~~~ 696 (732)
++++|.++++|++.
T Consensus 141 ~~~~i~~l~~~~~~ 154 (166)
T d2f9fa1 141 IIDAMKKVSKNPDK 154 (166)
T ss_dssp HHHHHHHHHHCTTT
T ss_pred HHHHHHHHHhCHHH
Confidence 99999999999763
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=4.9e-19 Score=194.98 Aligned_cols=311 Identities=10% Similarity=0.069 Sum_probs=202.2
Q ss_pred CccEEEeCCchhhHHHHHHHHhhcCCCccEEEEEeec--hhHhHH------HhhhhhccccEEEEecHHhHHHhhhHHHh
Q 004760 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMEN--RREYFD------RAKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (732)
Q Consensus 311 k~DlVia~Sav~~~~i~~~i~~~~~~~~~ivw~i~e~--r~~~~~------~~~~~l~r~~~li~vS~~~~~~~~~~~~~ 382 (732)
.-|+|+.|.... ..++.++...... .++.+.+|.. ....|. .....+-..+.+.|........+...|..
T Consensus 122 ~~d~iwvhDyhl-~llp~~lR~~~~~-~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ 199 (456)
T d1uqta_ 122 DDDIIWIHDYHL-LPFAHELRKRGVN-NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSN 199 (456)
T ss_dssp TTCEEEEESGGG-TTHHHHHHHTTCC-SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHH
T ss_pred CCCeEEEeccch-hhhHHHHHHhCCC-CcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHH
Confidence 448887776432 2234444433222 3355555432 111111 11122334678888887765544444422
Q ss_pred hhhhccC-CCccccccCCCccceEEeecCCCCCCCCCchhhHHHhHHhHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHH
Q 004760 383 EKLKLRS-QPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLL 461 (732)
Q Consensus 383 e~i~l~~-~~~~v~l~~n~~~~~v~vIpngvd~~~f~~~~~~ekr~~~r~~~R~~lgl~~~~~lil~vGri~~~KG~d~L 461 (732)
. ..... ....+ ........+.++|+|+|...|.+....+..+ ....++++++ +..+|+++||+.+.||++.+
T Consensus 200 l-l~~~~~~~~~i--~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~-~~~~l~~~~~---~~~~il~V~Rld~~KGi~~~ 272 (456)
T d1uqta_ 200 L-TRVTTRSAKSH--TAWGKAFRTEVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELK---NVQNIFSVERLDYSKGLPER 272 (456)
T ss_dssp H-SCEEEETTTEE--EETTEEEEEEECCCCCCHHHHHHHHHSCCCH-HHHHHHHHTT---TCEEEEEECCBCGGGCHHHH
T ss_pred H-hCcccccCCeE--EecCceeeeeeecCcccchhhhhhcccHHHH-HHHHHHHhcC---CCeEEEEeCCCchhhchHHH
Confidence 1 11100 01111 1122234668999999998775432111111 1234555554 67899999999999999999
Q ss_pred HHHHHHhHHhCCCCchhhhhhccccccccccccccccccccccccccccccCcccccccchhhhhccCCcccccCCCCCc
Q 004760 462 VESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSL 541 (732)
Q Consensus 462 LeA~~~l~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~l~g~~ll~~~~~~~~~~~~~~~~~~~~~~~~~P~~~n~~~p~l 541 (732)
|+|+..+.+++|+. +
T Consensus 273 l~A~~~~l~~~p~~------------------------~----------------------------------------- 287 (456)
T d1uqta_ 273 FLAYEALLEKYPQH------------------------H----------------------------------------- 287 (456)
T ss_dssp HHHHHHHHHHCGGG------------------------T-----------------------------------------
T ss_pred HHHHHHHHHhCccc------------------------c-----------------------------------------
Confidence 99999999998861 1
Q ss_pred ccccCCCCccccCCcccceeEEeccCchh-----hhhHhhhhhccCCCCCChhhHHHHHHHHHhcCCCCCcEEEccch--
Q 004760 542 FTSIGNTDAVSFGSGHLRRKVLSKSDGKQ-----QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT-- 614 (732)
Q Consensus 542 f~~~~~~d~v~iG~~~~~~~LlivG~G~~-----~~~Lk~li~~~G~~~~~~~y~k~il~~l~~~l~l~~~V~f~G~~-- 614 (732)
.+..++.++.++. ..++...+. ..+.++.... ...+..+.+.+.+..
T Consensus 288 ----------------~~v~lv~~~~~~~~~~~~~~~~~~ev~---------~lv~~in~~~-~~~~~~~~v~~~~~~~~ 341 (456)
T d1uqta_ 288 ----------------GKIRYTQIAPTSRGDVQAYQDIRHQLE---------NEAGRINGKY-GQLGWTPLYYLNQHFDR 341 (456)
T ss_dssp ----------------TTEEEEEECCBCSTTSHHHHHHHHHHH---------HHHHHHHHHH-CBTTBCSEEEECSCCCH
T ss_pred ----------------ccEEEEEEcCCcccchHHHHHHHHHHH---------HHHHHHHhhh-ccCCCCceeeccCCcCH
Confidence 1122333333321 112221111 0112222222 233666778888754
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCC-----EEEcCCCChhhhhccCceEEEECCCCCcHHHHHHHHHH
Q 004760 615 TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVP-----VLGTDAGGTKEIVEHNVTGLLHPPGHPGAQVLAQNLRY 689 (732)
Q Consensus 615 ~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlP-----VI~td~gG~~EiVe~g~~Gll~~~~d~~~e~La~aL~~ 689 (732)
+++..+|+.||++++||. .||||++++||||||+| +|+|+.+|+.+.+.+ |+++++.|+ +++|++|..
T Consensus 342 ~~l~a~~~~Adv~v~~s~--~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~---g~lVnP~d~--~~~A~ai~~ 414 (456)
T d1uqta_ 342 KLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDR--DEVAAALDR 414 (456)
T ss_dssp HHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT---SEEECTTCH--HHHHHHHHH
T ss_pred HHHhHHHhhhceeecCCc--cCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC---eEEECcCCH--HHHHHHHHH
Confidence 789999999999999997 99999999999999999 999999999999864 899999998 999999999
Q ss_pred Hhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 690 LLK-NPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 690 LL~-n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
+|. +++.++++.+++++.+.+ |++.++++.|++-++++.
T Consensus 415 aL~~~~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 415 ALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIV 454 (456)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhhc
Confidence 998 567889999999999985 999999999999998753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=2e-08 Score=101.62 Aligned_cols=114 Identities=16% Similarity=0.069 Sum_probs=82.1
Q ss_pred CCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCC---C----hhhhhccCceEEEECCC
Q 004760 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAG---G----TKEIVEHNVTGLLHPPG 676 (732)
Q Consensus 604 l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~g---G----~~EiVe~g~~Gll~~~~ 676 (732)
...++...++.+++.++|..||++|.. +.+.++.||+++|+|+|..... + ..+.+++...|+.++..
T Consensus 229 ~~~~~~v~~f~~~~~~lm~~adl~It~------~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~ 302 (351)
T d1f0ka_ 229 GQPQHKVTEFIDDMAAAYAWADVVVCR------SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP 302 (351)
T ss_dssp TCTTSEEESCCSCHHHHHHHCSEEEEC------CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG
T ss_pred ccccceeeeehhhHHHHHHhCchhhcc------ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechh
Confidence 345677888889999999999999943 3668999999999999986432 2 23455555688888777
Q ss_pred CCcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Q 004760 677 HPGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCMK 730 (732)
Q Consensus 677 d~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l~ 730 (732)
+.+.+.+.++|..+ +++.+.+|++++++.. ...-++++.+.++++.+
T Consensus 303 ~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~-----~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 303 QLSVDAVANTLAGW--SRETLLTMAERARAAS-----IPDATERVANEVSRVAR 349 (351)
T ss_dssp GCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-----CTTHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHhh--CHHHHHHHHHHHHccC-----CccHHHHHHHHHHHHHh
Confidence 76668888888776 6777888988877532 22335555555555543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.95 E-value=6.7e-08 Score=98.59 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=69.9
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC--------hhhhhccCceEEEEC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG--------TKEIVEHNVTGLLHP 674 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG--------~~EiVe~g~~Gll~~ 674 (732)
..+++|.+.++. +...++..+|++|..+ ...++.|||++|+|+|+....+ ..+.+++...|+.++
T Consensus 267 ~~~~~v~i~~~~-p~~~ll~~a~~~v~hg------G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~ 339 (391)
T d1pn3a_ 267 DDGADCFVVGEV-NLQELFGRVAAAIHHD------SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVD 339 (391)
T ss_dssp SCCTTCCEESSC-CHHHHHTTSSCEEEES------CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEEC
T ss_pred cCCCCEEEeccc-CHHHHHhhccEEEecC------chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcC
Confidence 445788899987 4668899999999666 4568999999999999976543 355666666899998
Q ss_pred CCCCcHHHHHHHHHHHhcCHHHHHH
Q 004760 675 PGHPGAQVLAQNLRYLLKNPSVRER 699 (732)
Q Consensus 675 ~~d~~~e~La~aL~~LL~n~~~r~~ 699 (732)
..+.+.+.|+++|.+++++ +.+++
T Consensus 340 ~~~~~~~~l~~~i~~~l~~-~~r~~ 363 (391)
T d1pn3a_ 340 GPVPTIDSLSAALDTALAP-EIRAR 363 (391)
T ss_dssp CSSCCHHHHHHHHHHHTST-THHHH
T ss_pred cCCCCHHHHHHHHHHHhCH-HHHHH
Confidence 8887779999999999964 44433
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.81 E-value=8.6e-08 Score=98.07 Aligned_cols=89 Identities=18% Similarity=0.161 Sum_probs=72.0
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
.++++|++.++.+ ...++..||++| ..+...++.||+++|+|+|+....+ ..+.+++...|+..+..+.
T Consensus 283 ~~~~~v~~~~~~p-~~~ll~~~~~~I------~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 283 DDRDDCFAIDEVN-FQALFRRVAAVI------HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp CCCTTEEEESSCC-HHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred cCCCCEEEEeccC-cHHHhhhccEEE------ecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 5678999999874 567889999999 4567789999999999999987765 4556666668999988877
Q ss_pred cHHHHHHHHHHHhcCHHHHHH
Q 004760 679 GAQVLAQNLRYLLKNPSVRER 699 (732)
Q Consensus 679 ~~e~La~aL~~LL~n~~~r~~ 699 (732)
+.+.|+++|+++++ ++.+++
T Consensus 356 ~~~~L~~ai~~vl~-~~~r~~ 375 (401)
T d1rrva_ 356 TFESLSAALTTVLA-PETRAR 375 (401)
T ss_dssp CHHHHHHHHHHHTS-HHHHHH
T ss_pred CHHHHHHHHHHHhC-HHHHHH
Confidence 77999999999995 554443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.72 E-value=1.4e-06 Score=88.24 Aligned_cols=84 Identities=14% Similarity=0.034 Sum_probs=68.6
Q ss_pred CCCCcEEEccchhhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhccCceEEEECCCCC
Q 004760 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVEHNVTGLLHPPGHP 678 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe~g~~Gll~~~~d~ 678 (732)
..+++|++.++.. ...+|..+|++| ..+...++.||+++|+|+|+....+ ..+.+++...|+..+..+.
T Consensus 282 ~~~~nv~~~~~~p-~~~~l~~~~~~V------~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 282 DDGADCFAIGEVN-HQVLFGRVAAVI------HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp SCGGGEEECSSCC-HHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred cCCCCEEEEeccC-HHHHHhhcCEEE------ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 4567899999884 568899999999 4568889999999999999976544 4555666568999888877
Q ss_pred cHHHHHHHHHHHhcC
Q 004760 679 GAQVLAQNLRYLLKN 693 (732)
Q Consensus 679 ~~e~La~aL~~LL~n 693 (732)
+++.|+++|.+++++
T Consensus 355 ~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 355 TFDSLSAALATALTP 369 (401)
T ss_dssp CHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHhCH
Confidence 779999999999953
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=97.64 E-value=0.0031 Score=65.68 Aligned_cols=109 Identities=20% Similarity=0.223 Sum_probs=76.1
Q ss_pred CCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEc-CCCChhhhhccCceEEEECCCCCcHH
Q 004760 605 SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGT-DAGGTKEIVEHNVTGLLHPPGHPGAQ 681 (732)
Q Consensus 605 ~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~t-d~gG~~EiVe~g~~Gll~~~~d~~~e 681 (732)
.+++.++... .++..++..|++++-.| |..+.||.++|+|||.- +.|.-.|-++.+.+ +++. .|. +
T Consensus 251 ~~n~~~~~~l~~~~~l~ll~~s~~vignS-------ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~--~ 319 (373)
T d1v4va_ 251 VRNFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDP--E 319 (373)
T ss_dssp CTTEEEECCCCHHHHHHHHHTEEEEEESC-------HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCH--H
T ss_pred cccceeeccchHHHHHHHhhhceeEeccc-------chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcC-CCH--H
Confidence 3577777754 67888999999999777 34688999999999998 55777777776644 4443 355 8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Q 004760 682 VLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYKCM 729 (732)
Q Consensus 682 ~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~~l 729 (732)
++..++..++.++..++.|... ..-|---+.++++++.+.+-+
T Consensus 320 ~I~~~i~~~l~~~~~~~~~~~~-----~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 320 GVYRVVKGLLENPEELSRMRKA-----KNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHS-----CCSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCHHHHhhcccC-----CCCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999888776431 122333344455555554433
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.43 E-value=0.012 Score=59.88 Aligned_cols=73 Identities=22% Similarity=0.169 Sum_probs=53.7
Q ss_pred HHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhh-hccCceEEEECCCC------CcHHHHHHHHH
Q 004760 620 LYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEI-VEHNVTGLLHPPGH------PGAQVLAQNLR 688 (732)
Q Consensus 620 lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~Ei-Ve~g~~Gll~~~~d------~~~e~La~aL~ 688 (732)
.+..||+|| .-|.-.++.||+++|+|+|+....+ ...- ++....|+..+... .+++++++++.
T Consensus 345 ~~p~~~~fI------tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~ 418 (461)
T d2acva1 345 AHKAIGGFV------SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLK 418 (461)
T ss_dssp HSTTEEEEE------ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHH
T ss_pred hcccCCEEE------ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHH
Confidence 568899999 4456779999999999999976633 3333 45556788776432 46699999999
Q ss_pred HHhcC-HHHHH
Q 004760 689 YLLKN-PSVRE 698 (732)
Q Consensus 689 ~LL~n-~~~r~ 698 (732)
++|++ +..++
T Consensus 419 ~vl~~d~~~r~ 429 (461)
T d2acva1 419 DLMDKDSIVHK 429 (461)
T ss_dssp HHTCTTCTHHH
T ss_pred HHhhCCHHHHH
Confidence 99975 43443
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.0094 Score=67.92 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=59.8
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECC
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPP 675 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~ 675 (732)
+|.|+... +-...++++|||-+..++.-.|+.|..-+=||.-|.+.+++--|...|+.++ +.||+++..
T Consensus 606 kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 606 KVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp EEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred eEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 68888743 5566889999999998886699999999999999999999999999998875 689999853
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.98 E-value=0.015 Score=66.28 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=89.3
Q ss_pred cEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCChhhhhcc--CceEEEECCCCC----
Q 004760 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGGTKEIVEH--NVTGLLHPPGHP---- 678 (732)
Q Consensus 607 ~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG~~EiVe~--g~~Gll~~~~d~---- 678 (732)
+|.|+... +-...++.+|||....|+.-.|+.|..-+=||.-|.+.++|--|...|+.++ +.||+++.....
T Consensus 630 kVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ev~~ 709 (824)
T d2gj4a1 630 RVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDR 709 (824)
T ss_dssp EEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHH
T ss_pred eEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCChhhhhH
Confidence 68888743 5566889999999998886699999999999999999999999999998875 578998853321
Q ss_pred ------cHHHHHHH----------------------------------------------------HHHHhcCHHHHHHH
Q 004760 679 ------GAQVLAQN----------------------------------------------------LRYLLKNPSVRERM 700 (732)
Q Consensus 679 ------~~e~La~a----------------------------------------------------L~~LL~n~~~r~~m 700 (732)
++.++.+. +..+..||..+-+|
T Consensus 710 ~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~ 789 (824)
T d2gj4a1 710 LDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRM 789 (824)
T ss_dssp HHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HhhcCCCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHHHhcCChhhhhccHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 11222221 22223457777777
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 701 AMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 701 ~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
...+...+ ..||-++|+++|.+-+-.
T Consensus 790 ~~~nia~~-g~FssdR~i~eY~~~iw~ 815 (824)
T d2gj4a1 790 VIRNIATS-GKFSSDRTIAQYAREIWG 815 (824)
T ss_dssp HHHHHTTC-GGGBHHHHHHHHHHHTTC
T ss_pred HHHHHhcC-CCcChHHHHHHHHHHccC
Confidence 77776664 469999999999876543
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=96.40 E-value=0.23 Score=50.96 Aligned_cols=109 Identities=18% Similarity=0.171 Sum_probs=71.0
Q ss_pred CCCCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCC-CChhhhhccCceEEEECCCCCc
Q 004760 603 NLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDA-GGTKEIVEHNVTGLLHPPGHPG 679 (732)
Q Consensus 603 ~l~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~-gG~~EiVe~g~~Gll~~~~d~~ 679 (732)
...++|.+.... .++..++..|++++-.|- + .+.||-.+|+|+|.-.. +.-+|-++.+. -++++. |.
T Consensus 253 ~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSs------s-~i~Ea~~lg~P~Inir~~tERqe~~~~g~-nilv~~-~~- 322 (377)
T d1o6ca_ 253 GDSDRVHLIEPLEVIDFHNFAAKSHFILTDSG------G-VQEEAPSLGKPVLVLRDTTERPEGVEAGT-LKLAGT-DE- 322 (377)
T ss_dssp -CCSSEEECCCCCHHHHHHHHHHCSEEEEC--------C-HHHHGGGGTCCEEEECSCCC---CTTTTS-SEEECS-CH-
T ss_pred ccccceEeccccchHHHHHHHhhhheeecccc------h-hHHhhhhhhceEEEeCCCCcCcchhhcCe-eEECCC-CH-
Confidence 445689988865 688899999999997773 2 48899999999998744 44555566553 355554 43
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 680 AQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 680 ~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
+.+.+++..++.++..++.+.. ...-|---..++++++++.+
T Consensus 323 -~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~ 364 (377)
T d1o6ca_ 323 -ENIYQLAKQLLTDPDEYKKMSQ-----ASNPYGDGEASRRIVEELLF 364 (377)
T ss_dssp -HHHHHHHHHHHHCHHHHHHHHH-----CCCTTCCSCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhChHHHhhhcc-----CCCCCCCChHHHHHHHHHHH
Confidence 8899999999999887765522 11224333445555555543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=96.23 E-value=0.014 Score=59.44 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhh-ccCceEEEECCCC
Q 004760 605 SKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIV-EHNVTGLLHPPGH 677 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiV-e~g~~Gll~~~~d 677 (732)
+.||....+... ..++ ..|++|| .-|...++.||+.+|+|+|+....+ ...-+ +....|+..+ .+
T Consensus 345 ~~Nv~~~~~~Pq-~~lL~hp~~~~fI------tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~-~~ 416 (473)
T d2pq6a1 345 ADRGLIASWCPQ-DKVLNHPSIGGFL------THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TN 416 (473)
T ss_dssp TTTEEEESCCCH-HHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SS
T ss_pred cCceEEeeeCCH-HHHhcCCcCcEEE------ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC-CC
Confidence 356777666533 3466 5777788 3356779999999999999987633 33334 4436788877 46
Q ss_pred CcHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHhhc
Q 004760 678 PGAQVLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKK-----HMYKKLSQVIYKCMK 730 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~-----~~~~~~~ev~~~~l~ 730 (732)
.+.++++++|++++.|+.. +++.+++.+..+. +... .-++.+.+++++++.
T Consensus 417 ~t~~~l~~ai~~vl~d~~~-~~~r~~a~~l~~~-~~~a~~~gg~s~~~~~~~i~~~~~ 472 (473)
T d2pq6a1 417 VKREELAKLINEVIAGDKG-KKMKQKAMELKKK-AEENTRPGGCSYMNLNKVIKDVLL 472 (473)
T ss_dssp CCHHHHHHHHHHHHTSHHH-HHHHHHHHHHHHH-HHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHcCChH-HHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHHHHhc
Confidence 6779999999999999863 3455555443321 1110 123445666666653
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=95.73 E-value=0.016 Score=59.22 Aligned_cols=85 Identities=18% Similarity=0.105 Sum_probs=62.6
Q ss_pred CCcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhhc-cCceEEEECCCC
Q 004760 605 SKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIVE-HNVTGLLHPPGH 677 (732)
Q Consensus 605 ~~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiVe-~g~~Gll~~~~d 677 (732)
++++.+..+.... .++ ..+|+|| .-|-..++.||+.+|+|+|+....+ ...-++ ....|+..+..+
T Consensus 318 ~~nv~~~~~~pq~-~lL~hp~~~~fI------tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 390 (450)
T d2c1xa1 318 RGYGMVVPWAPQA-EVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV 390 (450)
T ss_dssp TTTEEEESCCCHH-HHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred cccccccccCChH-hhhccCceeEEE------ccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCC
Confidence 3466666654333 455 5677777 3356779999999999999987754 333454 447899888887
Q ss_pred CcHHHHHHHHHHHhcCHHH
Q 004760 678 PGAQVLAQNLRYLLKNPSV 696 (732)
Q Consensus 678 ~~~e~La~aL~~LL~n~~~ 696 (732)
.+.+.+.++|.++|+|++.
T Consensus 391 ~t~~~l~~ai~~vL~d~~y 409 (450)
T d2c1xa1 391 FTKSGLMSCFDQILSQEKG 409 (450)
T ss_dssp CCHHHHHHHHHHHHHSHHH
T ss_pred cCHHHHHHHHHHHhcCcHH
Confidence 7889999999999999864
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.72 E-value=0.022 Score=57.98 Aligned_cols=86 Identities=10% Similarity=0.142 Sum_probs=62.3
Q ss_pred CCCCcEEEccchhhHHHHH--HHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcCCCC----hhhhh-ccCceEEEECC
Q 004760 603 NLSKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTDAGG----TKEIV-EHNVTGLLHPP 675 (732)
Q Consensus 603 ~l~~~V~f~G~~~dv~~ly--saADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td~gG----~~EiV-e~g~~Gll~~~ 675 (732)
..+++|.+.++..+. .++ ..+++|| .-|-..++.||+.+|+|+|+....+ ....+ +.-..|+....
T Consensus 331 ~~~~nv~~~~w~Pq~-~lL~hp~~~~fV------tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~ 403 (471)
T d2vcha1 331 TKKRGFVIPFWAPQA-QVLAHPSTGGFL------THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA 403 (471)
T ss_dssp TTTTEEEEESCCCHH-HHHHSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCC
T ss_pred ccCCCeeecccCCHH-HHhcCccCCEEE------ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEec
Confidence 346789999887444 577 4677787 3356679999999999999987643 33334 43357776644
Q ss_pred CC---CcHHHHHHHHHHHhcCHH
Q 004760 676 GH---PGAQVLAQNLRYLLKNPS 695 (732)
Q Consensus 676 ~d---~~~e~La~aL~~LL~n~~ 695 (732)
.+ .+.++++++|+++++|++
T Consensus 404 ~~~~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 404 GDDGLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp CTTSCCCHHHHHHHHHHHHTSTH
T ss_pred CCCCcCCHHHHHHHHHHHhCCcH
Confidence 43 566999999999999875
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=94.83 E-value=0.73 Score=47.18 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=72.2
Q ss_pred CCcEEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC-CCChhhhhccCceEEEECCCCCcHH
Q 004760 605 SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD-AGGTKEIVEHNVTGLLHPPGHPGAQ 681 (732)
Q Consensus 605 ~~~V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td-~gG~~EiVe~g~~Gll~~~~d~~~e 681 (732)
.+++.+.+.. .++..++..|++++-.|- -.+.||-.+|+|||.-. ...-++-++.+ +-++++. |. +
T Consensus 262 ~~ni~~~~~l~~~~fl~ll~~a~~vignSs-------sgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~--~ 330 (376)
T d1f6da_ 262 VKNVILIDPQEYLPFVWLMNHAWLILTDSG-------GIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DK--Q 330 (376)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCSEEEESSS-------GGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SH--H
T ss_pred cccceeeccccHHHHHHHHhhceEEEecCc-------chHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-CH--H
Confidence 3578887754 678899999999998884 24779999999999652 23455666654 4455543 44 8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004760 682 VLAQNLRYLLKNPSVRERMAMEGRKKVERMYLKKHMYKKLSQVIYK 727 (732)
Q Consensus 682 ~La~aL~~LL~n~~~r~~m~~~~r~~v~~~ys~~~~~~~~~ev~~~ 727 (732)
.+.+++.++++++..+..+.. ...-|---..++++.+++++
T Consensus 331 ~I~~ai~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 331 RIVEEVTRLLKDENEYQAMSR-----AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHHHHHHHCHHHHHHHHH-----SCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChHhhhhhcc-----CCCCCCCChHHHHHHHHHHh
Confidence 999999999988766554421 11224334556666666654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=91.53 E-value=0.12 Score=42.95 Aligned_cols=81 Identities=17% Similarity=0.148 Sum_probs=55.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCchhhhhcCccEEEeCCchhhHHHHHHH
Q 004760 251 ELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVCATWIDQYI 330 (732)
Q Consensus 251 ~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~~~~~~k~DlVia~Sav~~~~i~~~i 330 (732)
-++.+|+-.+- ||+.|.++|+.|+.-=. ...+....|+..|+++........+ .++|+|+.++++...- +.+.
T Consensus 6 fiGIgG~GMs~--LA~~L~~~G~~VsGSD~-~~~~~t~~L~~~Gi~i~~gh~~~~i---~~~d~vV~SsAI~~~n-pel~ 78 (89)
T d1j6ua1 6 FVGIGGIGMSA--VALHEFSNGNDVYGSNI-EETERTAYLRKLGIPIFVPHSADNW---YDPDLVIKTPAVRDDN-PEIV 78 (89)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEECS-SCCHHHHHHHHTTCCEESSCCTTSC---CCCSEEEECTTCCTTC-HHHH
T ss_pred EEeECHHHHHH--HHHHHHhCCCeEEEEeC-CCChhHHHHHHCCCeEEeeeccccc---CCCCEEEEecCcCCCC-HHHH
Confidence 34888987766 69999999999988753 3456778899999998754333223 3699999999876432 2233
Q ss_pred HhhcCCCc
Q 004760 331 TRFPAGGS 338 (732)
Q Consensus 331 ~~~~~~~~ 338 (732)
++...+.|
T Consensus 79 ~A~~~gIp 86 (89)
T d1j6ua1 79 RARMERVP 86 (89)
T ss_dssp HHHHTTCC
T ss_pred HHHHcCCC
Confidence 43344443
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=89.69 E-value=0.26 Score=41.27 Aligned_cols=73 Identities=25% Similarity=0.283 Sum_probs=53.9
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCCCCCChhHHHhCCcEEEEcCCCchhhhhcCccEEEeCCch
Q 004760 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (732)
Q Consensus 242 ~~kIllI~h~ls~gGA~~~~~eLA~~L~~~G~~V~vv~l~~~g~l~~el~~~gI~v~~~~~~~~~~~~~k~DlVia~Sav 321 (732)
.++|-|| +.||+-.+. ||..|.++||+|+.-- ....+..+.|...|+++........+ .++|+|+.++++
T Consensus 8 ~~~ihfi----GigG~GMs~--LA~~L~~~G~~VsGSD-~~~~~~~~~L~~~Gi~v~~g~~~~~i---~~~d~vV~S~AI 77 (96)
T d1p3da1 8 VQQIHFI----GIGGAGMSG--IAEILLNEGYQISGSD-IADGVVTQRLAQAGAKIYIGHAEEHI---EGASVVVVSSAI 77 (96)
T ss_dssp CCEEEEE----TTTSTTHHH--HHHHHHHHTCEEEEEE-SCCSHHHHHHHHTTCEEEESCCGGGG---TTCSEEEECTTS
T ss_pred CCEEEEE----EECHHHHHH--HHHHHHhCCCEEEEEe-CCCChhhhHHHHCCCeEEECCccccC---CCCCEEEECCCc
Confidence 4565554 777776654 6999999999998775 23455678888999999876555444 368999999987
Q ss_pred hhH
Q 004760 322 CAT 324 (732)
Q Consensus 322 ~~~ 324 (732)
...
T Consensus 78 ~~~ 80 (96)
T d1p3da1 78 KDD 80 (96)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=89.39 E-value=2.1 Score=41.58 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=32.9
Q ss_pred EEEccch--hhHHHHHHHcCEEEEccCCCCCCCcHHHHHHHHcCCCEEEcC
Q 004760 608 MLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPVLGTD 656 (732)
Q Consensus 608 V~f~G~~--~dv~~lysaADv~V~pS~~~~Egfg~vilEAMA~GlPVI~td 656 (732)
+-+.|.. .++..+++.||++|.+.. | .+--|.|+|+|+|+=-
T Consensus 244 ~~l~g~~sl~el~~li~~a~l~I~~Dt------g-~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 244 RNLAGETQLDQAVILIAACKAIVTNDS------G-LMHVAAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEESS------H-HHHHHHHTTCCEEEEE
T ss_pred ccccCCccHHHHHHHHhcceeEeecCc------c-HHHHHHHcCCCEEEEE
Confidence 4455643 799999999999998874 2 3466999999999954
|