Citrus Sinensis ID: 004773

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-
Protein Sequence
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Secondary Structure (PSIPRED)
cccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccHHEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEcccccccccccccccccccccccccccccHHHcccccccccccccEEccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEEEEEEEccccccEEEccccccccccccccHHHHcccccccEccccccccHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccEcccccccccccccHHccccHHHHHcccccccccccccccHHHHHcccHHcccccccccHHHHHHcccccccccccccccccccHcccccccccccccccccccccccccccccccHccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHcccccccHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHEEEcHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEcc
Coil and Loop (DISEMBL)
MERFSQRESVLlgygpqrsfmnehsssspkptaaggnsdidfddvfggpprrssmhetrcsyspsevtendgfrgddetvasrnswngvrekpvfgeegmnrrrypsenffddifrgngslssspricdrdpysssspasrvlsparplppkaepsgisihaefslpakftkgmelptfglaprspyksqdgtsnginhhsssllrssslnlsreegnETRSSYRQSILSrefslsnkdadtetvgnskmesnssevltsgnlfhfSIYKwaskrvpfdmplrevnrskskenndadkcsssdgwvggekelptetlhdtklhlnvgvladsesfriehnkqndtappdtstentvetwptadpgdatlentgeetkshsqseiglhneleKVSVVAEeahkpelkplcslfyndhyersneeMNKNAsekeskvkctkkssvvpyfsknkkkqdvkrecgevgkgglqgspmnskdlcktgvrgKVKEFVKIFNqeglskskinvdpqskssrwkgtgnskpekdanfskiapdgkihkstehekksfpdtpimvngnlphsekqlaatnttnhmsngtpewkdssstesggngsketgdidksfqgnslvnqvtkddnklrklgndpqefqAIDVQIRkwsngkegnIRSLLSTLQYIlwpasgwkpvplvdiiegnavKRSYQKALLclhpdklqqkgatcqQTYIAEKVLIFCRRHglisthlvrcd
Flexible Loop (DISEMBL)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRssmhetrcsyspsevtendgfrgddetvasrnswngvrekpvfgeegmnrrrYPSENFFDDIFRgngslssspriCDRDpysssspasrvlspARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINhhsssllrssslnlsreEGNETRSSyrqsilsrefslsnkdadtetvgnskmesnssevltsgNLFHFSIYKWASKRVPFDMPLREVnrskskenndadkcsssdgwvggEKELPTetlhdtklHLNVGVLADSESFRIEhnkqndtappdtstentvetwptadpGDATLENTGEETKshsqseiglhNELEKVSVVAEEAhkpelkplcsLFYNDHYERSNEEMnknasekeskvkctkkssvvpyfsknkkkqdvkrECGEvgkgglqgspmnskdlcKTGVRGKVKEFVKIfnqeglskskinvdpqskssrwkgtgnskpekdanfskiapdgkihkstehekksfpdtpiMVNGNLPHSEKQLAATNttnhmsngtpewkdsssTESGGNGSKEtgdidksfqgnSLVNQVTKddnklrklgndpqefqaIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHglisthlvrcd
Low Complexity Region (SEG)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDpysssspasrvlsparpLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGInhhsssllrssslnlsrEEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNAsekeskvkctkkssvvPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered region (IsUnstruct)
**************************************************************************************************************F**I***********************************************************************************************************************************************LTSGNLFHFSIYKWASKRVPFD***************************************DTKLHLNVGVLA***************************************************************************KPLCSLFYND***************************************************************CKTGVRGKVKEFVKIFN****************************************************************************************************************************************FQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVR**
Disordered Region (DISOPRED)
***********LGYGP*************************FDDVFGG*************************************************************FF******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************AIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered Region (DISEMBL)
********SVLLGYGPQRSF**************GGNSDIDFDDVFGGPP**********************FRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSS****************************KAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHS************************QSILSREFSL********************EVLTSGNLFHFSIYKWASKRVPFDMPLREVNR****************GWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNK****************TWPTADPGDATLE*************IGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERS*******************KSSVVPYFSK**********CGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKS**********************KDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHM**********************TGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered Region (DISPRO)
******RESVLL*YGPQRS*******************DIDFDDVFGGPPRR***********************************GVREKP***EEGMNRRRYPSENFFDDIFRGN*****************************************************K**EL*TFG***********GTSN***************************SYRQSIL*******************************GNLFHFSIYKWASKRVPFDMPLR********************GW*GGEKELPTETLHDTKLHLNVGVLA***********************************************************************************************************************************************************************************************************************************************************************************************DDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYxxxxxxxxxxxxxxxxxxxxxVKCTKKSSVVPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	731	2.2.26 [Sep-21-2011]
Q0WQ57	891	Auxilin-related protein 2	no	no	0.114	0.094	0.630	1e-29
Q9SU08	904	Auxilin-related protein 1	no	no	0.114	0.092	0.607	1e-28
O13773	697	UBA domain-containing pro	yes	no	0.098	0.103	0.438	3e-10
Q27974	910	Putative tyrosine-protein	yes	no	0.082	0.065	0.475	3e-10
O75061	913	Putative tyrosine-protein	yes	no	0.082	0.065	0.475	3e-10
Q80TZ3	938	Putative tyrosine-protein	yes	no	0.082	0.063	0.459	6e-10
P97874	1305	Cyclin-G-associated kinas	no	no	0.106	0.059	0.390	1e-09
Q99KY4	1305	Cyclin-G-associated kinas	no	no	0.088	0.049	0.436	2e-09
O14976	1311	Cyclin-G-associated kinas	no	no	0.088	0.049	0.436	3e-09
Q06677	668	Auxilin-like clathrin unc	yes	no	0.101	0.110	0.346	2e-05

>sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1

 Score =  132 bits (331), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 67/84 (79%)

Query: 635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 694
           +DV+IR+W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I G +VK+ Y+KA LC+HP
Sbjct: 796 LDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHP 855

Query: 695 DKLQQKGATCQQTYIAEKVLIFCR 718
           DK+QQKGA  QQ YIAEKV    +
Sbjct: 856 DKVQQKGANLQQKYIAEKVFDMLK 879

Promotes probably uncoating of clathrin-coated vesicles.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2

 Score =  128 bits (322), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 66/84 (78%)

Query: 635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 694
           +DV+I++W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I   +VK+ Y+KA LC+HP
Sbjct: 809 LDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIHP 868

Query: 695 DKLQQKGATCQQTYIAEKVLIFCR 718
           DK+QQKGA  QQ YIAEKV    +
Sbjct: 869 DKVQQKGANLQQKYIAEKVFDMLK 892

Promotes probably uncoating of clathrin-coated vesicles.

Arabidopsis thaliana (taxid: 3702)

>sp|O13773|UCP7_SCHPO UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp7 PE=4 SV=1

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 639 IRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ 698
           + KW  GKE N+R+LL++L  ILWP   W+ V L +++    VK +Y KA+  +HPDKL 
Sbjct: 607 VNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLP 666

Query: 699 QKGATCQQTYIAE 711
           Q+ +   Q  IAE
Sbjct: 667 QQTSVEHQ-LIAE 678

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q27974|AUXI_BOVIN Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 637 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 695
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 817 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 876

Query: 696 K 696
           K
Sbjct: 877 K 877

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3

 Score = 67.4 bits (163), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 637 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 695
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 820 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 879

Query: 696 K 696
           K
Sbjct: 880 K 880

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q80TZ3|AUXI_MOUSE Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2

 Score = 66.6 bits (161), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 637 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 695
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y++A+L +HPD
Sbjct: 845 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPD 904

Query: 696 K 696
           K
Sbjct: 905 K 905

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P97874|GAK_RAT Cyclin-G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 616  TKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVD 674
            T  + + ++L  D   F+   +++  W  GKE NIR+LLSTL  +LW   S W PV + D
Sbjct: 1194 TMAEMRKQELARDTDPFK---LKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMAD 1250

Query: 675  IIEGNAVKRSYQKALLCLHPDK 696
            ++    VK+ Y++A+L +HPDK
Sbjct: 1251 LVTPEQVKKQYRRAVLVVHPDK 1272

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99KY4|GAK_MOUSE Cyclin-G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 6/71 (8%)

Query: 627  NDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSY 685
             DP + + +D     W  GKE NIR+LLSTL  +LW   S W PV + D++    VK+ Y
Sbjct: 1207 TDPLKLKLLD-----WIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQY 1261

Query: 686  QKALLCLHPDK 696
            ++A+L +HPDK
Sbjct: 1262 RRAVLVVHPDK 1272

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 6/71 (8%)

Query: 627  NDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSY 685
             DP + + +D     W  GKE NIR+LLSTL  +LW   S W PV + D++    VK+ Y
Sbjct: 1213 TDPLKLKLLD-----WIEGKERNIRALLSTLHTVLWDGESRWTPVGMADLVAPEQVKKHY 1267

Query: 686  QKALLCLHPDK 696
            ++A+L +HPDK
Sbjct: 1268 RRAVLAVHPDK 1278

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06677|SWA2_YEAST Auxilin-like clathrin uncoating factor SWA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWA2 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 638 QIRKWSNGKEGNIRSLLSTLQYIL-WPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDK 696
           +I  W +GK+ +IR LL+ L  +L W    WK V + D++    VK +Y KA+   HPDK
Sbjct: 577 KISSWKDGKDDDIRHLLANLSSLLTW--CNWKDVSMQDLVMPKRVKITYMKAVAKTHPDK 634

Query: 697 LQQKGATCQQTYIAEKVL 714
           + +   + +   IAE + 
Sbjct: 635 IPE-SLSLENKMIAENIF 651

Cofactor for the uncoating of clathrin-coated vesicles (CCVs) by Hsp70-type chaperones (SSA1/2/3 and SSB1/2). Coat disassembly is important for fusion of vesicles with target membranes and for recycling components of clathrin coats to the cytoplasm for further rounds of vesicle formation. Binds to assembled clathrin and recruits the ATP-activated chaperone to CCVs. Stimulates the ATPase activity of the clathrin-associated Hsp70-type chaperone SSA1, which then disrupts clathrin-clathrin interactions, leading to release of the clathrin coat. In addition, prevents unproductive clathrin assembly in the cell. Also required for cortical endoplasmic reticulum inheritance.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	731
224136558	725	predicted protein [Populus trichocarpa]	0.932	0.940	0.452	1e-137
255538574	770	heat shock protein binding protein, puta	0.928	0.881	0.438	1e-135
225458352	766	PREDICTED: uncharacterized protein LOC10	0.949	0.906	0.434	1e-134
449460161	742	PREDICTED: uncharacterized protein LOC10	0.934	0.920	0.400	1e-100
356518054	677	PREDICTED: uncharacterized protein LOC10	0.854	0.923	0.372	3e-95
449477022	665	PREDICTED: uncharacterized protein LOC10	0.835	0.918	0.377	1e-89
224067383	615	predicted protein [Populus trichocarpa]	0.439	0.521	0.507	2e-73
356510239	280	PREDICTED: uncharacterized protein LOC10	0.347	0.907	0.442	3e-48
18410769	651	J-domain protein required for chloroplas	0.388	0.436	0.395	5e-46
297842251	648	J-domain protein required for chloroplas	0.313	0.353	0.44	1e-43

>gi|224136558|ref|XP_002326890.1| predicted protein [Populus trichocarpa] gi|222835205|gb|EEE73640.1| predicted protein [Populus trichocarpa]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 335/741 (45%), Positives = 431/741 (58%), Gaps = 59/741 (7%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MERFSQRESVLLGY  QR   N   SSS    +  GNSDIDF DVFGGPPRRSS+ E R 
Sbjct: 1   MERFSQRESVLLGYNLQRQSKNHPGSSS---NSQHGNSDIDFIDVFGGPPRRSSLQEVRS 57

Query: 61  SYSPSEVTENDGFR-GDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNG 119
           S++  E T++   R GD +T+ SRNS +G+ EKPVFG+E +NRRRYP  +FFDDIFRGN 
Sbjct: 58  SFA--ETTDSFVSRSGDVDTMLSRNSLSGLNEKPVFGDENVNRRRYPRNDFFDDIFRGNK 115

Query: 120 SLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTF 179
           SLSS P+  D D  SS+ P SRVLSP   LPP+A+P   S+ A+FSL AK +K  +LPTF
Sbjct: 116 SLSSPPKKHDLDSLSST-PGSRVLSPTGQLPPRADPWSPSLPAQFSLSAKLSKRTDLPTF 174

Query: 180 GLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSL---- 235
             +  S +K++DG S G+ +++ S   +S  +  R+E   T    RQS LS+E SL    
Sbjct: 175 NSSAHSMHKNKDGASYGVGNYAHS---ASQTDHVRDEL--TNDISRQSTLSKELSLTSEE 229

Query: 236 ---SNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKE 292
              S K  +T+T  N K +S+SS+V T+GN  HFSIYKWAS+ +PF M LR   +S+  E
Sbjct: 230 SSNSTKHEETDTNTNLKSDSDSSDVPTNGNQSHFSIYKWASEGIPFVMSLRGATKSRLDE 289

Query: 293 NNDADKCSSSDGWVGGE---KELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPD 349
           N +  +CSS+ GW+  E   +EL +   HD        +   S S  IE N+Q++    D
Sbjct: 290 NCELQRCSSASGWIASEGIARELRSANPHD--------IDVPSFSSHIELNQQDNRFLFD 341

Query: 350 TSTENTVETWPTADPGDATLENTGEETKSHSQS--EIGLHNEL-----EKVSVVAEEAHK 402
            S +  VE  P     D        +T S  Q   E G   +L     E++SVV  E  K
Sbjct: 342 KSIQCEVE--PCQIVEDTIFPVPELDTPSTHQVIVEDGPEMDLSEKTKERISVVTLEDRK 399

Query: 403 PELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECG- 461
            ELKP  SL   +  E+  +EM +    KE K + TKK S V   S+N K QD KR    
Sbjct: 400 TELKPPRSLLSENDDEQCIDEMTRKNGLKERKAESTKKPSAVFDVSENVKDQDEKRTTAN 459

Query: 462 --EVGKGGLQGSPMNSKD-LCKTGVRGKVKEFVKIFNQEGLSKSKINV-DPQSKSSRWKG 517
             EV K   Q  P  S+D L K  +RGKVKEFVKIFN+ G  K   ++ D Q +SS    
Sbjct: 460 NVEVDKADFQYPPTKSRDSLEKNRLRGKVKEFVKIFNRAGSEKPNFDLNDSQHQSS---- 515

Query: 518 TGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMS 577
               + E+    +    + K+H S     K+ PD  I+V   L  SEKQ   T   N  S
Sbjct: 516 ---GRKERIKFNTDDTRNEKMH-SRNVNNKNMPDASILVKKCLKQSEKQHPETKANNLRS 571

Query: 578 NGTPEWKDSSSTESGG---NGSKET-GDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQ 633
                 +  SS  +     +G + T  D D SF    L+ ++ +D+ +  +  ++ +E Q
Sbjct: 572 ESVSSGRKDSSVSTAAYIPDGLESTIADTDMSFL---LITELAQDEERELQTSDNHEEIQ 628

Query: 634 AIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLH 693
            ID +I+KWS GKEGNIRSLLSTLQY+LW  SGW PVPLVDIIEGNAVKR+YQKALLCLH
Sbjct: 629 VIDDKIQKWSKGKEGNIRSLLSTLQYVLWSGSGWNPVPLVDIIEGNAVKRTYQKALLCLH 688

Query: 694 PDKLQQKGATCQQTYIAEKVL 714
           PDKLQQKGAT  Q Y AEK+ 
Sbjct: 689 PDKLQQKGATSHQKYTAEKIF 709

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538574|ref|XP_002510352.1| heat shock protein binding protein, putative [Ricinus communis] gi|223551053|gb|EEF52539.1| heat shock protein binding protein, putative [Ricinus communis]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 346/789 (43%), Positives = 448/789 (56%), Gaps = 110/789 (13%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           ME+ S RES+LLGY PQR+  N   +SSP       + DIDF DVFGGPPRR+S+ ETRC
Sbjct: 1   MEKLSNRESILLGYSPQRNISNNLPTSSP------DSPDIDFHDVFGGPPRRASIQETRC 54

Query: 61  SYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGS 120
           S+      END       T + R+ W+G+ E+PVFGE+   RRRY S +FFDDIFR N S
Sbjct: 55  SFG-----ENDTDSYALTTSSHRHRWSGLSERPVFGEDSATRRRYTSHDFFDDIFRVNES 109

Query: 121 LSSSPRICDRDPYSSSSPASRVLSPARPLPPKA-EP-SGISIHAEFSLPAKFTKGMELPT 178
           LS+SPR  + D +SS+ P S+VLSP RPLPP+A EP    S+ A+FSLPAK  KG +LPT
Sbjct: 110 LSTSPRKNETDSFSSN-PGSKVLSPVRPLPPRAAEPFPSASLPAQFSLPAKLIKGTDLPT 168

Query: 179 FGLAPRSPYKSQDGTSNGINHHSSSLLR--SSSLNLSREEGNETRSSYRQSILSREFSLS 236
           FG + R+ +K++DG SN ++ ++ S L   SS  NL  E  ++    Y +S LSRE S++
Sbjct: 169 FGSSARNHHKNKDGNSNAMSSYAYSPLSRVSSQENLVEESRSDV---YIKSSLSREPSVN 225

Query: 237 NKDADTETV------GNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKS 290
           + ++  E        GN K +S+ +   ++ N FHFSIYKWASK VP  +PLR  N SK 
Sbjct: 226 SLESSLEKPDEMDKGGNLKKDSSET---SNSNRFHFSIYKWASKGVPLALPLRGGNTSKL 282

Query: 291 KENNDADKCSSSDGWVGGE---KELPTETLHD------------------TKLHLN---- 325
           KE    ++ SS+ G V  E   KELPT T  D                  +++ L+    
Sbjct: 283 KEKVKLERSSSTSGRVACEGRAKELPTLTSQDIDRPSYTWSNCISTDAKSSEIELDKKER 342

Query: 326 -VGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTA--DPGDATLENTGEETKSHSQS 382
              ++  +   R+E  +  + A   +  EN      T     G+    ++  E K+HS  
Sbjct: 343 GFLLMTSTTHGRVEEGQTVEEAALKSEPENQRARQETVKDSAGNNIFRDSKGERKTHSVI 402

Query: 383 EIGLHNEL-EKVSVVAEEAHKPELKPLCSLFYNDHY-----------------ERSNEEM 424
           + G   +  EK+  V  E  + ELK L SL   D Y                  R++E  
Sbjct: 403 DTGKSGKRGEKIPEVTRETPETELKTLHSLMLGDDYGEGKTCSKSRLFASQVFSRADEIT 462

Query: 425 NKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKREC---GEVGKGGLQGSPMNSKD-LCK 480
            KN   KESKVK TK+S+ V   S+  KKQ   R      E+ K  LQGSP  S   L K
Sbjct: 463 IKNEL-KESKVKSTKRSAAVFNVSEKVKKQVEARTILNGSEMDKANLQGSPKESNGGLTK 521

Query: 481 TGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSS---RWKGTGNSKPEKDANFSKIAPDGK 537
              R KVKEFVKIFNQE   K   N D QS  S   RWK  G  KPE+D + +    D K
Sbjct: 522 NRGRQKVKEFVKIFNQEASGKPTFNSDSQSPQSQSSRWKERGKFKPEEDPSVAPTKLDDK 581

Query: 538 IHKSTEHEKKSFPDTPIMVNGNL---PHS----EKQLAATNTTNH----MSNGTPEWKDS 586
           +H               + NGN    PH+    EKQ + T + NH    +S+G  + K +
Sbjct: 582 VH---------------LPNGNKNHKPHASIRFEKQHSETRSHNHEPTDISSGLKD-KSA 625

Query: 587 SSTESGGNGSKET-GDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNG 645
           S+  S  +GSK    D D SFQGN L+ ++ +D+N+L + G++ + FQ ID +IRKWS+G
Sbjct: 626 STAASIPDGSKAVLEDPDDSFQGNILIKELPQDENELPQAGDNQEVFQDIDTKIRKWSDG 685

Query: 646 KEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQ 705
           KEGNIRSLLSTLQY+LWP SGWKPVPLVDIIEGNAVKRSYQKALL LHPDKLQQKGAT  
Sbjct: 686 KEGNIRSLLSTLQYVLWPESGWKPVPLVDIIEGNAVKRSYQKALLTLHPDKLQQKGATSH 745

Query: 706 QTYIAEKVL 714
           Q YIAEKV 
Sbjct: 746 QKYIAEKVF 754

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458352|ref|XP_002281702.1| PREDICTED: uncharacterized protein LOC100264365 [Vitis vinifera] gi|302142455|emb|CBI19658.3| unnamed protein product [Vitis vinifera]

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 331/762 (43%), Positives = 444/762 (58%), Gaps = 68/762 (8%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MER   +E+ +LG   QRS +   S SSPK      +SD+DF DVFGGPPRR S   TR 
Sbjct: 9   MERCCHKENTVLGCRHQRSLVT--SVSSPKTPLR--HSDVDFHDVFGGPPRRLSNQVTR- 63

Query: 61  SYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGS 120
            YS  E TE    RG ++ V+  N W G+ EKPVFGE+G NRRRY SE+FFDDIFRG+ S
Sbjct: 64  -YSFGEGTEPSALRGGEDGVSVCNPWTGLSEKPVFGEDGGNRRRYHSEDFFDDIFRGDNS 122

Query: 121 LSSSPRICDRDPYSSSSPASRVLSPARP--------LPPKAEPSGISIHAEFSLPAKFTK 172
           +++SPR  D DP+SSS P SRVLSPA+P            + P+ +S     SLP+K T+
Sbjct: 123 VNTSPRGHDLDPFSSS-PGSRVLSPAQPLPPPQAEIFGSSSNPAQLST----SLPSKVTR 177

Query: 173 GMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEG--NETRSSYRQSILS 230
            M+  +     R P     G SNG ++  S   R S+  +  ++G  N+   SYRQS LS
Sbjct: 178 AMDFHSL----REP-----GASNGSSYPYSPPSRFSNQTIQGQDGLKNDPWPSYRQSRLS 228

Query: 231 REFSLSNKDADTETVGN-----SKME--SNSSEVLTSGNLFHFSIYKWASKRVPFDMPLR 283
            EFSL+  ++   T  N       +E  SNSS+V  + +  HFS+YKWASK VPF  PLR
Sbjct: 229 HEFSLAGDESPKLTTSNRADMGDNLENGSNSSKVEINTSQSHFSLYKWASKGVPFVTPLR 288

Query: 284 EVNRSKSKENNDADKCSSSDGWVGGEK---ELPTETLHDTKLHLNVGVLADSESFRIEHN 340
            +N S++K  +  ++CSS++G    E+   ELP   +HD + H      A ++SF+I+  
Sbjct: 289 RLNSSRTKVKSKTERCSSTNGRFQSERMVSELPEAIMHDVEYHYTDDTSASTKSFKIDRE 348

Query: 341 KQNDTAPPDTSTENTVE----------TWPTADP---------GDATLENTGEETKSHSQ 381
           KQ + A     T++ +E            P  +P          DA L NT +E K +S 
Sbjct: 349 KQKNDALFTKITQDRLEECQIVEEVVLAIPNLEPLNKTHNRIEDDAVLSNTRKEGKPYSL 408

Query: 382 SEIGLHNELEK-VSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKK 440
           SE GL  + EK +SV+A E   PELK L SL +     +  +++      KES +K TKK
Sbjct: 409 SETGLCGKAEKEISVLAHEVSNPELKSLRSLLHETDDGQGTDKVTGKDGGKESMLKTTKK 468

Query: 441 SSV--VPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKD-LCKTGVRGKVKEFVKIFNQE 497
           SSV  VP  +K ++++ +  +   V K   Q SP NS D L + GV+GKV+EFVK  NQE
Sbjct: 469 SSVDVVPENAKEQERKGIASDSALVDKASSQCSPRNSGDSLGRNGVKGKVREFVKKLNQE 528

Query: 498 GLSKSKINV---DPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPI 554
             SK   N    DP+S+SSR K  G+ + EK A+ S    D ++H    + KK  PD  I
Sbjct: 529 ASSKPITNSEPSDPRSQSSRRKNAGSFRAEKGAHVSATETDEQMHMDNANRKKMVPDASI 588

Query: 555 MVNGNLPHSEKQLAATNTTNHMSNGTPE-WKDSSSTESGGNGS-KETGDIDKSFQGNSLV 612
           MV+ N    +++ +   T  H S+GT    KDS ++ S  + S     D   SFQGN ++
Sbjct: 589 MVDENPKQQQRRYSGLKTAIHKSSGTTYVQKDSLASVSIPDDSVAALRDRQDSFQGNFVI 648

Query: 613 NQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPL 672
            +++++ +K  ++  D  E Q  D +IR+W +GKEGNIRSLLSTLQY+LWP SGWKPVPL
Sbjct: 649 EELSQEQSKQPQIDEDHDEIQVSDAKIRQWLSGKEGNIRSLLSTLQYVLWPESGWKPVPL 708

Query: 673 VDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           VDIIEGNAVKR+YQKALLCLHPDKLQQKGA   Q YIAEKV 
Sbjct: 709 VDIIEGNAVKRAYQKALLCLHPDKLQQKGAAVHQKYIAEKVF 750

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460161|ref|XP_004147814.1| PREDICTED: uncharacterized protein LOC101211029 [Cucumis sativus]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 303/757 (40%), Positives = 411/757 (54%), Gaps = 74/757 (9%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSD-IDFDDVFGGPPRR-SSMHET 58
           M+  SQR+S+LLGY  QRS  N   SSSP+  A+  NSD +DF DVFGGPPRR SS+HET
Sbjct: 1   MDNLSQRDSILLGYSLQRSSAN---SSSPR--ASNRNSDDVDFHDVFGGPPRRRSSVHET 55

Query: 59  RCSYSPSEVTENDGFR---GDDETVASRNS-WNGVREKPVFGEEGMNRRRYPSENFFDDI 114
           R S+S +     D F    G+DE +  R+  W+G+ EKPVFGEEG++ RR+PS++F+DDI
Sbjct: 56  RYSFSET----GDSFALKGGEDEALPGRSGPWSGLNEKPVFGEEGVHGRRFPSDDFYDDI 111

Query: 115 FRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGIS-IHAEFSLPAKFTKG 173
           F+G+ S++SSPR  D     S +P SRVLSPARPLPP AEP G S + A+ SLP++  KG
Sbjct: 112 FKGDESVNSSPRRGD---IFSPNPGSRVLSPARPLPPPAEPFGSSSLPAQLSLPSRLAKG 168

Query: 174 MELPTFGLAPRSPYKSQDGTSNGINHHSSSL-LRSSSLNLSREEGNETRSSY----RQSI 228
            +LP FG    S  +++D  SNG + +S    L   S + S     + ++ Y    R  +
Sbjct: 169 TDLPAFG---SSSLRNKDSVSNGSHTNSPRFTLSRFSFSTSSHRFEDPKTDYDLSDRTGV 225

Query: 229 LSREFSLSNKDADTETV-------GNS--KMESNSSEVLTSGNLF--HFSIYKWASKRVP 277
           L  EF  ++ D     +       GNS  K E +S E    G  F  HFSIYKWASK VP
Sbjct: 226 LPSEFQENDGDEALSFINSGNGLSGNSLTKGEEDSLEESNGGGQFQFHFSIYKWASKGVP 285

Query: 278 FDMPLREVNRSKSKENNDADKCSSS-DGWVGGEKEL--PTETLHDTKLHLNVGVLADSES 334
             MP R  N  + +E     K SSS D  V  + E+  PT T+ +  +          E+
Sbjct: 286 LMMPSRG-NGPRLREKTLLRKSSSSTDRLVKAKNEMHSPTSTIQNIDISPVF-----HET 339

Query: 335 FRIEHNKQNDTAPPD----------TSTENTVETWPTADPGDATLENTGEETKSHS-QSE 383
            +++  K  D  P            T ++N          G   +    E+ K HS   +
Sbjct: 340 TKVDDEKGIDILPDTGNLDQRQSSFTPSKNLSRQSSRTAVGSDNISRPTEKEKPHSLPKK 399

Query: 384 IGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSV 443
           +      +K++    E  K E K L S       E+S E + K   + E   K   KSS 
Sbjct: 400 VSSEKPAKKMTSRTIEDQKHEAKSLSSFLLYSDSEQSEERITKEYRKGEIMAKGDMKSSN 459

Query: 444 VPYFSKNKK--KQDVKRECGEVGKGGLQGSPMNS-KDLCKTGVRGKVKEFVKIFNQEGLS 500
           +   S  KK  KQ   R   +V K  +  S + S  ++ +  V GK+ EFVK+FNQE  S
Sbjct: 460 LSDLSSPKKLEKQTSLRNS-KVKKPTVPSSDVESGHNIGRKKVGGKISEFVKLFNQEPTS 518

Query: 501 KSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGK--IHKSTEHEKKSFPDTPIMVNG 558
           K +  VD ++ SS  K    S+P K    +KI  D K  ++K+T+   K    +   V+ 
Sbjct: 519 KPQDVVDLENDSSTMKQ--ESEP-KGPTVNKIRKDEKPKLNKNTDASIKGDNISEKSVDD 575

Query: 559 NLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKET-GDIDKSFQGNSLVNQVTK 617
           N      + AA+   N  S  + E   + +T    N +K T  ++++ FQ N  V ++ +
Sbjct: 576 N----STKKAASFKNNFAS--SKESSPAPNTVHVPNVTKSTVSEVEEPFQDNFSVQELPQ 629

Query: 618 DDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIE 677
           D     +  N  +E QA+D +IR+WS+GKEGNIRSLLSTLQY+LWP SGWK VPLVDIIE
Sbjct: 630 DYEDSTETNNGREEVQALDTKIRQWSSGKEGNIRSLLSTLQYVLWPKSGWKAVPLVDIIE 689

Query: 678 GNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           GNAVKRSYQKALL LHPDKLQQKGA+  Q YIA KV 
Sbjct: 690 GNAVKRSYQKALLYLHPDKLQQKGASSDQKYIAAKVF 726

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518054|ref|XP_003527699.1| PREDICTED: uncharacterized protein LOC100820241 [Glycine max]

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 279/750 (37%), Positives = 392/750 (52%), Gaps = 125/750 (16%)

Query: 1   MERF--SQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHET 58
           MERF  SQRES+LLGY     ++N   S  P+ +++  NS++DF DVFGGPPRRSS++E 
Sbjct: 1   MERFYSSQRESLLLGYN--NDYIN---SLIPRSSSSDSNSEVDFTDVFGGPPRRSSVNEA 55

Query: 59  RCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPS---ENFFDDIF 115
           R +    E++E +G RG          W   REKPVFGE+  NRRR+P+    +FFDDIF
Sbjct: 56  RQTVG--ELSEEEGERG-------WCRWPPEREKPVFGEDSGNRRRHPTNKNSDFFDDIF 106

Query: 116 RG--NGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKG 173
            G  +GS+ S+P+    D ++     SRV SP    P      G S+ A FSLPAK T G
Sbjct: 107 GGEASGSVCSTPKKRVGDAFA----LSRVSSPLPLPPAADPVVG-SLPATFSLPAKLTNG 161

Query: 174 MELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREF 233
           ++LPTFG + R+           +++ +  ++ S+ L             YRQS+LS+EF
Sbjct: 162 VDLPTFGSSTRN---------RNLSNINDGIVASNGLK-----------PYRQSLLSQEF 201

Query: 234 SLSNKD--ADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSK 291
           S S+    AD  ++    +  +      S   FHFSIYKWASK VP  MPLR    S++K
Sbjct: 202 SNSSTSDKADKGSIMKQNISISEGSPGASNGQFHFSIYKWASKGVPMVMPLRTERNSRNK 261

Query: 292 ENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTS 351
           +    ++CSS+  W+       +E      +  N   L         +N++ D     T 
Sbjct: 262 DKAKLERCSSAKEWI------VSEITTQNPIEYNGSPLM--------NNRKQDVPTTSTP 307

Query: 352 TEN------TVETWPTA---------------DPGDATLENTGEETKSHSQS--EIGLHN 388
           TEN       VE   +A               D   +++ +   E +S ++S  EIG   
Sbjct: 308 TENGSDSNQIVEQIVSAKTQSDKSSSPQTITKDVPTSSISHDAREVESSTRSTGEIGFSG 367

Query: 389 ELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFS 448
           + E     A+E  K E KPL  LF     ++ N+E      E E+++K +KK S V   +
Sbjct: 368 KTE----AAKETQKREPKPLQFLFKESDKKQDNDETITRERE-ENRMKSSKKLSAVFDVT 422

Query: 449 KNKKKQDVK----RECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKI 504
            N  KQ+ K    R+ G   K   QGS    +++ K  V+GKVKEF +IFNQE ++K K 
Sbjct: 423 VNPIKQEEKTVPLRDVGR-SKAISQGSVSLGENMGKGLVKGKVKEFARIFNQEAVTKPKF 481

Query: 505 NVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSE 564
           + + +S+ S +K     + + +                             V G    S+
Sbjct: 482 DSNSRSQGSTYKKREALRAKNE-----------------------------VEGGPEQSK 512

Query: 565 KQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRK 624
           K  +AT TTN  +N     +D S  E         GD D+SF G+ ++  + +D++++ +
Sbjct: 513 KYNSATETTNISANILSHEEDISEPEIPDISFTVIGDKDESFHGSFMIQVLAQDEDEVLQ 572

Query: 625 LGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRS 684
              + QE Q ID +I++WS GKEGNIRSLLSTLQY+LWP  GWK VPLVDIIEGNAVKRS
Sbjct: 573 -NQENQEIQTIDNKIKQWSKGKEGNIRSLLSTLQYVLWPECGWKYVPLVDIIEGNAVKRS 631

Query: 685 YQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           YQ+ALLCLHPDKLQQKGA+  Q YIAEKV 
Sbjct: 632 YQRALLCLHPDKLQQKGASSDQKYIAEKVF 661

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477022|ref|XP_004154905.1| PREDICTED: uncharacterized protein LOC101230998 [Cucumis sativus]

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 284/752 (37%), Positives = 380/752 (50%), Gaps = 141/752 (18%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSD-IDFDDVFGGPPRR-SSMHET 58
           M+  SQR+S+LLGY  QRS  N   SSSP+  A+  NSD +DF DVFGGPPRR SS+HET
Sbjct: 1   MDNLSQRDSILLGYSLQRSSAN---SSSPR--ASNRNSDDVDFHDVFGGPPRRRSSVHET 55

Query: 59  RCSYSPSEVTENDGFRG-DDETVASRNS-WNGVREKPVFGEEGMNRRRYPSENFFDDIFR 116
           R S+S  E   +   +G +DE +  R+  W+G+ EKPVFGEEG++ RR+PS++F+DDIF+
Sbjct: 56  RYSFS--ETGNSFALKGGEDEALPGRSGPWSGLNEKPVFGEEGVHGRRFPSDDFYDDIFK 113

Query: 117 GNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGIS-IHAEFSLPAKFTKGME 175
           G+ S++SSPR  D     S +P SRVLSPARPLPP AEP G S + A+ SLP++  KG +
Sbjct: 114 GDESVNSSPRRGD---IFSPNPGSRVLSPARPLPPPAEPFGSSSLPAQLSLPSRLAKGTD 170

Query: 176 LPTFGLAPRSPYKSQDGTSNGINHHSSSL-LRSSSLNLSREEGNETRSSY----RQSILS 230
           LP FG    S  +++D  SNG + +S    L   S + S     + ++ Y    R  +L 
Sbjct: 171 LPAFG---SSSLRNKDSVSNGSHTNSPRFTLSRFSFSTSSHRFEDPKTDYDLSDRTGVLP 227

Query: 231 REFSLSNKDADTETV-------GNS--KMESNSSEVLTSGNLF--HFSIYKWASKRVPFD 279
            EF  ++ D     +       GNS  K E +S E    G  F  HFSIYKWASK VP  
Sbjct: 228 SEFQENDGDEALSFIKSGNGLSGNSLTKGEEDSLEESNGGGQFQFHFSIYKWASKGVPLM 287

Query: 280 MPLREVNRSKSKENNDADKCSSS-DGWVGGEKEL--PTETLHDTKLHLNVGVLADS-ESF 335
           MP R  N S+ +E     K SSS D  V  + E+  PT T+       N+ +   S E+ 
Sbjct: 288 MPSRG-NGSRLREKTLLRKSSSSTDRLVKAKNEMHSPTSTIQ------NIDIPPVSHETT 340

Query: 336 RIEHNKQNDTAPPD----------TSTENTVETWPTADPGDATLENTGEETKSHSQ-SEI 384
           +++  K  D  P            T ++N          G   +    E+ K HS   ++
Sbjct: 341 KVDDEKGIDILPDTGNLDQRQSSFTPSKNLSRQSSRTAVGSDNISRPTEKEKPHSLPKKV 400

Query: 385 GLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVV 444
                 +K++    E  K E K L S       E+S E + K                  
Sbjct: 401 SSEKPEKKMTSWTIEDQKHEAKSLSSFLLYSDSEQSEERITK------------------ 442

Query: 445 PYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKI 504
                            E  KG +                   KEFVK+FNQE  SK + 
Sbjct: 443 -----------------EYRKGEIMA-----------------KEFVKLFNQEPTSKPQD 468

Query: 505 NVDPQSKSSRWKGTGNSKPEKDANFSKIAPDG--KIHKSTEHEKKSFPDTPIMVNGNLPH 562
            VD ++ SS  K    S+P K    +KI  D   K++K+T+   K    +   V+ N   
Sbjct: 469 VVDLENDSSTMK--QESEP-KGPTVNKIRKDEKPKLNKNTDASIKGDNISEKSVDDN--- 522

Query: 563 SEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKL 622
           S K+ A+   T  +                           +  Q  + V ++ +D    
Sbjct: 523 STKKAASLKITLLLPK-------------------------RVVQLQTQVQELPQDYEDS 557

Query: 623 RKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVK 682
            +  N  +E QA+D +IR+WS+GKEGNIRSLLSTLQY+LWP SGWK VPLVDIIEGNAVK
Sbjct: 558 TETNNGREEVQALDTKIRQWSSGKEGNIRSLLSTLQYVLWPKSGWKAVPLVDIIEGNAVK 617

Query: 683 RSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           RSYQKALL LHPDKLQQKGA+  Q YIA KV 
Sbjct: 618 RSYQKALLYLHPDKLQQKGASSDQKYIAAKVF 649

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067383|ref|XP_002302477.1| predicted protein [Populus trichocarpa] gi|222844203|gb|EEE81750.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 180/355 (50%), Positives = 231/355 (65%), Gaps = 34/355 (9%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MERFSQRESVLLGY  QR F+N HS SSP+  +  GNSDIDF DVFGGPPRRSS+ E R 
Sbjct: 1   MERFSQRESVLLGYNFQRPFIN-HSGSSPE--SQYGNSDIDFTDVFGGPPRRSSLQEVR- 56

Query: 61  SYSPSEVTENDGFR---GDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRG 117
            YS SE T  D F    GD +T  SR+S +G+ +KPVFG+E +NRRRYP++ FF DIFR 
Sbjct: 57  -YSFSETT--DSFASTSGDVDTKLSRHSLSGLNDKPVFGDENVNRRRYPNDGFFGDIFRD 113

Query: 118 NGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELP 177
           + SLSSSPR  DRD  SS+   SRVLSPA  LP +A+P   S+ A+FSLPAK  KG +LP
Sbjct: 114 SESLSSSPRKHDRDSLSSTR-GSRVLSPAELLPHRADPWSPSLPAQFSLPAKLIKGTDLP 172

Query: 178 TFGLAPRSPYKSQDGTSNGI-NHHSSSLLRSSSL-NLSREEGNETRSSYRQSILSREFSL 235
           TF  + R  +K++DG SNGI N+  S L RS+SL NL R+E   T     QS LS+E SL
Sbjct: 173 TFISSARDHHKNKDGASNGISNYTYSPLSRSASLTNLVRDE--LTNDVSWQSALSKEPSL 230

Query: 236 SNKDA-------DTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRS 288
            ++++       +T+   N K +S+ SE+ T+ N FHFSIYKWA+K +PF MPLR  N+S
Sbjct: 231 CSEESSNVTKPEETDKSRNLKRDSDGSEIPTNRNQFHFSIYKWATKGLPFAMPLRGANKS 290

Query: 289 KSKENNDADKCSSSDGWVGGE---KELPTETLHD---------TKLHLNVGVLAD 331
           +  E     +CSS++GW   E   +EL +   HD           L+LN+ V+ +
Sbjct: 291 RLNEKCKLQRCSSTNGWAAYEGLARELRSAIPHDIDYSLIQTQVSLYLNLQVIVE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510239|ref|XP_003523847.1| PREDICTED: uncharacterized protein LOC100820002 [Glycine max]

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/289 (44%), Positives = 170/289 (58%), Gaps = 35/289 (12%)

Query: 430 EKESKVKCTKKSSVVPYFSKNKKKQDVK----RECGEVGKGGLQGSPMNSKDLCKTGVRG 485
           E+   +K TKKSS V   + N  KQ+ K    R+ G   K   QGS    ++L K  V+G
Sbjct: 7   EENRMMKSTKKSSAVFDVTVNPMKQEEKAVPLRDVGR-SKATSQGSVSLGENLGKGLVKG 65

Query: 486 KVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHE 545
           KVKEF +IFNQE ++K K++   Q + S +K       ++DA              T++E
Sbjct: 66  KVKEFARIFNQEAVNKPKVDSKSQPQGSTYK-------KRDA------------LRTKNE 106

Query: 546 KKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKS 605
            ++ P+ P          +K  + T TTN  +N      D S  E         GD D+S
Sbjct: 107 VEAGPEQP----------KKDNSVTETTNISANNLFHQDDISEPEIPDISFTVIGDKDES 156

Query: 606 FQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPAS 665
           F G+ ++  + +D+ ++ +   + QE Q ID +I++WS GKEGNIRSLLSTLQY+LWP  
Sbjct: 157 FPGSFMIQVLAQDEGEVLQTQKN-QEIQTIDNKIKQWSKGKEGNIRSLLSTLQYVLWPEC 215

Query: 666 GWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           GWKPVPLVDIIEGNAVKRSYQ+ALLCLHPDKLQQKGA+  Q YIAEKV 
Sbjct: 216 GWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVF 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410769|ref|NP_565101.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis thaliana] gi|12323895|gb|AAG51921.1|AC013258_15 unknown protein; 9598-12259 [Arabidopsis thaliana] gi|15982795|gb|AAL09745.1| At1g75100/F9E10_5 [Arabidopsis thaliana] gi|21655287|gb|AAM65355.1| At1g75100/F9E10_5 [Arabidopsis thaliana] gi|74267412|dbj|BAE44203.1| auxilin-like J-domain protein [Arabidopsis thaliana] gi|332197551|gb|AEE35672.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis thaliana]

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 183/331 (55%), Gaps = 47/331 (14%)

Query: 405 LKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECGEVG 464
           +KPL S+F+ +  ER +E++      ++ K K     S        KK Q  K       
Sbjct: 331 VKPLHSIFHEED-ERQDEKIVSEREVRKGKSKAKNTRSFTEDSRTKKKSQGTK------- 382

Query: 465 KGGLQGSPMNSK----------DLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQS--KS 512
              L  SP+  K          ++ K GV+GKV +FVKIF++ G S   +    +S  +S
Sbjct: 383 -SSLDSSPIPDKSSFASSSAAPEVGKDGVKGKVSDFVKIFSK-GAS---VGAGGESLGQS 437

Query: 513 SRWKGTGNSKPEKDANFSKIAPDGKIHKST----EHEKKSFPDTPIMVNGNLPH--SEKQ 566
           SRW+        K+   + I  DG   K T    + +KKS PD P M     P   ++K+
Sbjct: 438 SRWRA-------KETPKTDIIHDGSNAKETVNIPDQQKKSTPDIPAMNRDQKPSQSTQKK 490

Query: 567 LAATNTTNHMSNG---TPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLR 623
            +   + N+ + G     E ++ S+T +         DID+ F  N  V  +T+D+NK+ 
Sbjct: 491 DSDRESMNYKAPGDTVQEERQEPSTTHTTSE------DIDEPFHVNFDVEDITQDENKME 544

Query: 624 KLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKR 683
           +   D +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++
Sbjct: 545 EANKDAEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRK 604

Query: 684 SYQKALLCLHPDKLQQKGATCQQTYIAEKVL 714
           SYQ+ALL LHPDKLQQKGA+  Q Y+AEKV 
Sbjct: 605 SYQRALLILHPDKLQQKGASANQKYMAEKVF 635

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842251|ref|XP_002889007.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis lyrata subsp. lyrata] gi|297334848|gb|EFH65266.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis lyrata subsp. lyrata]

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 155/250 (62%), Gaps = 21/250 (8%)

Query: 477 DLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQS--KSSRWKGTGNSKPEKDANFSKIAP 534
           ++ K GV+GKV +FVKIF++ G S   +    +S  +SSRW+      P+ D N      
Sbjct: 400 EVGKDGVKGKVSDFVKIFSK-GAS---VGAGGESLGQSSRWRA--KETPKTDINHDAANA 453

Query: 535 DGKIHKSTEHEKKSFPDTPIMVNGNLPH--SEKQLAATNTTNHMSNGTP---EWKDSSST 589
              ++   + +KKS PD P M   + P   ++K+ +   + N+ + G     E ++ S+T
Sbjct: 454 KDTVN-IPDQQKKSTPDIPAMNRDSKPSHATQKKDSDRESMNYKAPGVTVQEERQEPSTT 512

Query: 590 ESGGNGSKETGDIDKSFQGNSLVNQVTKDDN-KLRKLGNDPQEFQAIDVQIRKWSNGKEG 648
            +         DID+ F  N  V  +T+D+N K+ +   D +E + ID +IRKWS+GK G
Sbjct: 513 HTTSE------DIDEPFHVNFDVEDITQDENNKMEETNKDAEEIKKIDAKIRKWSSGKSG 566

Query: 649 NIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTY 708
           NIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+ALL LHPDKLQQKGA+  Q Y
Sbjct: 567 NIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKY 626

Query: 709 IAEKVLIFCR 718
           +AEKV  F +
Sbjct: 627 MAEKVFEFLQ 636

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	731
TAIR|locus:2037256	651	JAC1 "J-domain protein require	0.426	0.479	0.380	2.2e-69
TAIR|locus:2135763	891	AT4G12770 [Arabidopsis thalian	0.214	0.176	0.412	6.9e-26
TAIR|locus:2135778	904	AT4G12780 [Arabidopsis thalian	0.108	0.087	0.645	2.4e-23
TAIR|locus:2115245	1422	AT4G36520 [Arabidopsis thalian	0.235	0.120	0.392	2.4e-23
TAIR|locus:2036967	523	AT1G21660 [Arabidopsis thalian	0.240	0.336	0.351	1e-20
TAIR|locus:2009817	455	AT1G30280 [Arabidopsis thalian	0.284	0.457	0.302	1.2e-20
TAIR|locus:2018462	1448	AUL1 "AT1G75310" [Arabidopsis	0.180	0.091	0.426	1.3e-20
UNIPROTKB|G4NGN1	907	MGG_04080 "Uncharacterized pro	0.094	0.076	0.434	6e-11
WB|WBGene00001043	784	dnj-25 [Caenorhabditis elegans	0.261	0.243	0.299	3.8e-10
ZFIN|ZDB-GENE-080104-2	903	dnajc6 "DnaJ (Hsp40) homolog,	0.298	0.241	0.259	6.4e-09

TAIR|locus:2037256 JAC1 "J-domain protein required for chloroplast accumulation response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
 Identities = 127/334 (38%), Positives = 180/334 (53%)

Query:   389 ELEKVSVVAEEAHKPE-LKPLCSLFYNDHYERSNEEMNKNAXXXXXXXXXXXXXXXXPYF 447
             E E+      +AH+   +KPL S+F+ +  ER +E++                       
Sbjct:   314 ESEQAFSGVSKAHEATTVKPLHSIFHEED-ERQDEKIVSEREVRKGKSKAKNTRSFTEDS 372

Query:   448 SKNKKKQDVKR--ECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKIN 505
                KK Q  K   +   +       S   + ++ K GV+GKV +FVKIF++ G S     
Sbjct:   373 RTKKKSQGTKSSLDSSPIPDKSSFASSSAAPEVGKDGVKGKVSDFVKIFSK-GASVGA-G 430

Query:   506 VDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKST----EHEKKSFPDTPIMVNGNLP 561
              +   +SSRW+      P+ D     I  DG   K T    + +KKS PD P M     P
Sbjct:   431 GESLGQSSRWRA--KETPKTD-----IIHDGSNAKETVNIPDQQKKSTPDIPAMNRDQKP 483

Query:   562 H--SEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDD 619
                ++K+ +   + N+ + G    ++     +    S+   DID+ F  N  V  +T+D+
Sbjct:   484 SQSTQKKDSDRESMNYKAPGDTVQEERQEPSTTHTTSE---DIDEPFHVNFDVEDITQDE 540

Query:   620 NKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGN 679
             NK+ +   D +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGN
Sbjct:   541 NKMEEANKDAEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGN 600

Query:   680 AVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKV 713
             AV++SYQ+ALL LHPDKLQQKGA+  Q Y+AEKV
Sbjct:   601 AVRKSYQRALLILHPDKLQQKGASANQKYMAEKV 634

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009903 "chloroplast avoidance movement" evidence=IMP

GO:0009904 "chloroplast accumulation movement" evidence=IMP

GO:0071483 "cellular response to blue light" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

TAIR|locus:2135763 AT4G12770 [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 6.9e-26, Sum P(3) = 6.9e-26
 Identities = 68/165 (41%), Positives = 95/165 (57%)

Query:   557 NGNLPHSEKQLAATNTTNHMSN--GTPE-----WKD-SSSTESGGNGSKETGDIDKSFQG 608
             +G   +  K  +ATN  + +S+  G P      ++D    TE       E     +    
Sbjct:   710 SGPTENLRKASSATNIVDDLSSIFGAPASQSGGFQDVDGETEERRRARLERHQRTQERAA 769

Query:   609 NSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWK 668
              +L  +  +D    R+     +    +DV+IR+W  GKEGN+R+LLSTLQY+LWP  GW+
Sbjct:   770 KALAEKNERDLQVQREQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQ 829

Query:   669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKV 713
             PV L D+I G +VK+ Y+KA LC+HPDK+QQKGA  QQ YIAEKV
Sbjct:   830 PVSLTDLITGASVKKVYRKATLCIHPDKVQQKGANLQQKYIAEKV 874

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2135778 AT4G12780 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
 Identities = 51/79 (64%), Positives = 65/79 (82%)

Query:   635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 694
             +DV+I++W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I   +VK+ Y+KA LC+HP
Sbjct:   809 LDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIHP 868

Query:   695 DKLQQKGATCQQTYIAEKV 713
             DK+QQKGA  QQ YIAEKV
Sbjct:   869 DKVQQKGANLQQKYIAEKV 887

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2115245 AT4G36520 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
 Identities = 71/181 (39%), Positives = 106/181 (58%)

Query:   540 KSTEHEKKSFPDTPIMVNGNL-PHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKE 598
             ++ E  ++S  D     +G      E  L+     N +S G   ++DS  TE G +  + 
Sbjct:  1228 EARERMERSVSDKQSQSSGFFGERMEISLSDKQFQNSVSFGASRYQDSHGTE-GESPQRY 1286

Query:   599 TGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAI------DVQIRKWSNGKEGNIRS 652
             T  +++  +    V +   + N +R L    ++ + I      D ++++WS+GKEGNIR+
Sbjct:  1287 TSRLERHQRTADRVAKALAEKN-MRDLVAQREQAERIRIAETLDTEVKRWSSGKEGNIRA 1345

Query:   653 LLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEK 712
             LLSTLQYIL P SGW+P+PL ++I   AVKR+Y+KA LC+HPDKLQQ+GA   Q YI EK
Sbjct:  1346 LLSTLQYILGPESGWQPLPLTEVITSAAVKRAYRKATLCVHPDKLQQRGANIHQKYICEK 1405

Query:   713 V 713
             V
Sbjct:  1406 V 1406

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2036967 AT1G21660 [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
 Identities = 65/185 (35%), Positives = 97/185 (52%)

Query:   537 KIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMS---NGTPEWKDSSSTESGG 593
             K   +TE  +K   + P      + +++K  A  N  +  S      P ++       G 
Sbjct:   323 KSRTTTETTRKQASNAPKKTPNGVSNAKKPPAPANLVDDFSALFGEDPIFRQFEEIP-GE 381

Query:   594 NGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQE-----FQAIDVQIRKWSNGKEG 648
             +  +     D+  +  S V Q   D N         QE      + +D +IR+W+ GKEG
Sbjct:   382 SEERRKARWDREQRTKSRVAQAVADMNNRDHQSRIEQEQRTRISETVDTEIRRWATGKEG 441

Query:   649 NIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTY 708
             N+R+LLS+L  +LWP  GW+ V + D+I  +AVK+ Y+KA L +HPDK+QQKGAT +Q Y
Sbjct:   442 NMRALLSSLHIVLWPGCGWEAVSITDLITSSAVKKVYRKATLYVHPDKVQQKGATLEQKY 501

Query:   709 IAEKV 713
             IAEKV
Sbjct:   502 IAEKV 506

GO:0005634 "nucleus" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2009817 AT1G30280 [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
 Identities = 69/228 (30%), Positives = 111/228 (48%)

Query:   500 SKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAP--DGKIHKSTEHEKKSFPDTPIMVN 557
             S   I++DP S   R    G S P      S I    D   H + +   +      ++V 
Sbjct:   215 SPETISLDPNS-FRRMDDYGPSSPASSPVSSFICEEEDDNTH-AKQRTNRDCKVEEVVVE 272

Query:   558 GNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSF---QGNSL--- 611
                   E+++++       S+    +++      GG G+ ++ D+D++    +  S    
Sbjct:   273 DEEDEEEEEMSSY-VIEINSDRFDRYREEGG---GGGGNSDSNDMDEAIAWAKERSQRPE 328

Query:   612 VNQVTKDDNKLRKLGNDPQ-----EFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASG 666
               Q  +D    R+   +P+     E +  D +IR W  GKE NIR LLSTL ++LW  S 
Sbjct:   329 AKQTEEDVIDSRRSEEEPKSEEEMEMEMKDEEIRIWLTGKETNIRLLLSTLHHVLWSNSN 388

Query:   667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQ-QTYIAEKV 713
             W  +PL ++ +G+ VK++YQ+A LCLHPDKLQQ+G T   Q  +A +V
Sbjct:   389 WDSIPLANLRDGSQVKKAYQRARLCLHPDKLQQRGGTSPIQKSVASRV 436

GO:0005737 "cytoplasm" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2018462 AUL1 "AT1G75310" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
 Identities = 64/150 (42%), Positives = 95/150 (63%)

Query:   577 SNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKD-------DNKLRKLGNDP 629
             S+GT   ++ SS  S  N S +TG+  +  +  S  +Q T D       + KLR L    
Sbjct:  1288 SSGT---ENKSSGPS--NSSNQTGEPIQRCKARSERHQRTSDRAAEALAEKKLRDLKTQK 1342

Query:   630 QEFQ------AIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKR 683
             ++ +      A+D  +++WS+GKE N+R+L+STLQYIL   SGWKP+PL D++   +V++
Sbjct:  1343 EQTERNRLAEALDADVKRWSSGKENNLRALISTLQYILGAESGWKPIPLTDLVSSASVRK 1402

Query:   684 SYQKALLCLHPDKLQQKGATCQQTYIAEKV 713
             +Y+KA L +HPDKLQQ+GA+ QQ YI EKV
Sbjct:  1403 AYRKATLYVHPDKLQQRGASTQQKYICEKV 1432

GO:0006457 "protein folding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

UNIPROTKB|G4NGN1 MGG_04080 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 168 (64.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
 Identities = 30/69 (43%), Positives = 43/69 (62%)

Query:   635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 694
             +D +I  W +GK  N+R+LL +L  +LW  SGWK V L +++  N VK  Y KA+   HP
Sbjct:   813 VDARIAAWRDGKRDNLRALLGSLDQVLWEGSGWKKVGLHELVVANKVKIIYMKAIAKCHP 872

Query:   695 DKLQQKGAT 703
             DK+ Q  +T
Sbjct:   873 DKIAQDAST 881

GO:0008150 "biological_process" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

WB|WBGene00001043 dnj-25 [Caenorhabditis elegans (taxid:6239)]

 Score = 182 (69.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
 Identities = 65/217 (29%), Positives = 99/217 (45%)

Query:   500 SKSKINVDPQSKSSRWKGT---GNSKPEKDANFSKIAPDGKIHKSTEHEK-----KSFPD 551
             S S ++    + SS W  T   G   P K    S   P    + S  + K      S  D
Sbjct:   545 SASNLSTASPATSS-WSNTDLLGGFSPMKPQTTS--TPPNTRNPSASNSKPVSQVNSQAD 601

Query:   552 TPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNS- 610
                 ++ N P  ++Q A  NT N +S  T + +  + T     G   TG    S    S 
Sbjct:   602 FEAFLS-NYPE-QRQAAPQNTQN-VSQKTQQTRPQN-TYKPAFGDAATGSAKVSMDAFSD 657

Query:   611 LVNQ----VTKDDNKLRKLGN-----DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYIL 661
             L+NQ     T+ +N+ + +GN       +     ++QIR W+ GKE NIR+LL +L  +L
Sbjct:   658 LLNQGGFKPTQRENQKQSIGNMLKVEQSKNLTPEEIQIRDWTQGKERNIRALLGSLHNVL 717

Query:   662 WP-ASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKL 697
             W  A  W    + D++  + +K+ Y+KA L +HPDKL
Sbjct:   718 WEGADRWNQPSMGDLLTPDQIKKHYRKACLVVHPDKL 754

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

ZFIN|ZDB-GENE-080104-2 dnajc6 "DnaJ (Hsp40) homolog, subfamily C, member 6" [Danio rerio (taxid:7955)]

 Score = 176 (67.0 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
 Identities = 64/247 (25%), Positives = 113/247 (45%)

Query:   459 ECGEVGKG-GLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINV-----DPQSKS 512
             + G +G G G  GS  +SK    TG  G    F  + + +  + S  +       P +  
Sbjct:   644 DLGNLGAGLGGGGSGFSSKPTTPTGTGGA---FPPMGSPQRPAPSPQHTASGGWHPNTGF 700

Query:   513 SRWKGTGNSK--PEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAAT 570
               W+  G ++  P+     +K  P    H S ++ + ++  +   ++G  P +    A  
Sbjct:   701 PSWQAGGGAQWQPQAQGTPTKAPPASMPHTSPQN-RPNYNVSFSAMSGASPGAAGPKAQP 759

Query:   571 NTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQ 630
             N           + D  S + G  G KE        +G   + ++ K++   +++  DP+
Sbjct:   760 NMGTRPKVSDANFDDLLSGQ-GFAGGKEK-------KGPKTIAEMRKEE-MAKEM--DPE 808

Query:   631 EFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKAL 689
             + + +D     W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+
Sbjct:   809 KLKILD-----WIEGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAV 863

Query:   690 LCLHPDK 696
             L +HPDK
Sbjct:   864 LVVHPDK 870

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00400168 hypothetical protein (725 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	731
KOG0431	453	consensus Auxilin-like protein and related protein	100.0
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	98.52
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.5
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	98.49
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	98.46
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	98.37
PRK14288	369	chaperone protein DnaJ; Provisional	98.35
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	98.28
PRK14296	372	chaperone protein DnaJ; Provisional	98.24
PRK14285	365	chaperone protein DnaJ; Provisional	98.2
PRK14279	392	chaperone protein DnaJ; Provisional	98.19
PRK14286	372	chaperone protein DnaJ; Provisional	98.15
PRK14299	291	chaperone protein DnaJ; Provisional	98.14
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.13
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.13
PRK14283	378	chaperone protein DnaJ; Provisional	98.13
PRK14277	386	chaperone protein DnaJ; Provisional	98.13
PRK14295	389	chaperone protein DnaJ; Provisional	98.12
PRK10767	371	chaperone protein DnaJ; Provisional	98.12
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	98.1
PRK14278	378	chaperone protein DnaJ; Provisional	98.09
PRK14276	380	chaperone protein DnaJ; Provisional	98.08
PRK14294	366	chaperone protein DnaJ; Provisional	98.08
PRK14287	371	chaperone protein DnaJ; Provisional	98.07
PRK14284	391	chaperone protein DnaJ; Provisional	98.07
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	98.06
PRK14280	376	chaperone protein DnaJ; Provisional	98.06
PRK14291	382	chaperone protein DnaJ; Provisional	98.05
PRK14297	380	chaperone protein DnaJ; Provisional	98.05
PRK14281	397	chaperone protein DnaJ; Provisional	98.05
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.04
PRK14282	369	chaperone protein DnaJ; Provisional	98.03
PRK14301	373	chaperone protein DnaJ; Provisional	98.02
PRK14298	377	chaperone protein DnaJ; Provisional	98.0
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	97.99
PRK14300	372	chaperone protein DnaJ; Provisional	97.99
PRK14292	371	chaperone protein DnaJ; Provisional	97.93
PRK14290	365	chaperone protein DnaJ; Provisional	97.93
PRK14293	374	chaperone protein DnaJ; Provisional	97.89
PHA03102	153	Small T antigen; Reviewed	97.89
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	97.87
PRK14289	386	chaperone protein DnaJ; Provisional	97.84
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	97.82
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	97.72
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	97.65
PTZ00100	116	DnaJ chaperone protein; Provisional	97.64
PRK05014	171	hscB co-chaperone HscB; Provisional	97.6
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	97.57
PRK03578	176	hscB co-chaperone HscB; Provisional	97.47
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	97.47
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	97.45
PRK00294	173	hscB co-chaperone HscB; Provisional	97.42
PRK01356	166	hscB co-chaperone HscB; Provisional	97.4
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	97.26
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	97.15
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.14
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	97.12
PHA02624	647	large T antigen; Provisional	97.04
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	96.9
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	96.35
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	96.18
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	95.83
PRK01773	173	hscB co-chaperone HscB; Provisional	95.42
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	95.4
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	94.94
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	91.81
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	89.59
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	89.46

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=100.00  E-value=8.7e-38  Score=335.74  Aligned_cols=99  Identities=53%  Similarity=0.921  Sum_probs=96.2

Q ss_pred             chhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHH
Q 004773          629 PQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTY  708 (731)
Q Consensus       629 ~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~  708 (731)
                      .++++.++.+|+.|+.|||+||||||||||+|||++|+|++|+|.|||+|++|||+||||||||||||++|++++++|||
T Consensus       353 ~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~  432 (453)
T KOG0431|consen  353 SRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKY  432 (453)
T ss_pred             HhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHH
Confidence            48899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcc
Q 004773          709 IAEKVLIFCRRHGLISTHL  727 (731)
Q Consensus       709 IAe~VF~eLNEAYEVf~~~  727 (731)
                      ||+.||++|++||+.|...
T Consensus       433 Iaekvfd~l~eawn~f~~~  451 (453)
T KOG0431|consen  433 IAEKVFDALSEAWNKFNQQ  451 (453)
T ss_pred             HHHHHHHHHHHHHHhhhcc
Confidence            9999999999999999753

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=98.52  E-value=1.8e-07  Score=73.65  Aligned_cols=54  Identities=19%  Similarity=0.164  Sum_probs=46.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-+||..-++..+||++|+++++.+|||++.+.      ...++..|..|++||++...
T Consensus         4 y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~~~~~l~~Ay~~L~~   57 (60)
T smart00271        4 YEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD------KEEAEEKFKEINEAYEVLSD   57 (60)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHHHcC
Confidence            4557788889999999999999999999998742      34789999999999999753

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.1e-07  Score=102.34  Aligned_cols=52  Identities=15%  Similarity=0.160  Sum_probs=46.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-+++++|||||||+++++|||+++...       -|+..|.+||+||||..
T Consensus         7 YeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~-------~AeeKFKEI~eAYEVLs   58 (371)
T COG0484           7 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDK-------EAEEKFKEINEAYEVLS   58 (371)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999998421       48999999999999964

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.49  E-value=1.2e-07  Score=100.59  Aligned_cols=52  Identities=17%  Similarity=0.195  Sum_probs=47.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++=++|...++..+||+||||++|++||||++.+.       -|...|..||.||+|..
T Consensus        19 YelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp-------~A~e~F~~in~AYEVLs   70 (336)
T KOG0713|consen   19 YELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDP-------NANEKFKEINAAYEVLS   70 (336)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhc
Confidence            56789999999999999999999999999998643       48999999999999963

>cd06257 DnaJ DnaJ domain or J-domain

Probab=98.46  E-value=2.8e-07  Score=71.17  Aligned_cols=52  Identities=19%  Similarity=0.190  Sum_probs=44.6

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=+|+..-++..+||++|+++++.+|||+..+.       ..+...|..|++||++..
T Consensus         3 y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-------~~~~~~~~~l~~Ay~~L~   54 (55)
T cd06257           3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-------PEAEEKFKEINEAYEVLS   54 (55)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence            3456777888999999999999999999998742       468999999999999864

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=98.37  E-value=6e-07  Score=72.01  Aligned_cols=53  Identities=19%  Similarity=0.147  Sum_probs=46.2

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +=+||..-++..+||++|++++..+||||+.+..      -.|+..|..|++||++.+.
T Consensus         4 ~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~------~~~~~~~~~i~~Ay~~L~~   56 (64)
T PF00226_consen    4 EILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE------AEAEEKFARINEAYEILSD   56 (64)
T ss_dssp             HHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH------HHHHHHHHHHHHHHHHHHS
T ss_pred             HHCCCCCCCCHHHHHHHHHhhhhccccccchhhh------hhhhHHHHHHHHHHHHhCC
Confidence            4578888999999999999999999999997532      3588999999999999864

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.35  E-value=4.2e-07  Score=96.68  Aligned_cols=52  Identities=19%  Similarity=0.246  Sum_probs=45.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=++|..-+++.+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         6 Y~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~-------~a~~~f~~i~~AYevLs   57 (369)
T PRK14288          6 YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-------EAEEKFKLINEAYGVLS   57 (369)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcc-------HHHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999986421       37889999999999975

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=98.28  E-value=1.2e-06  Score=90.11  Aligned_cols=59  Identities=22%  Similarity=0.256  Sum_probs=51.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-+++..-+++.+||++|||+++.+||||+..++.+.+..-.|+..|..|++||++-.
T Consensus       203 y~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~  261 (267)
T PRK09430        203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIK  261 (267)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence            45568888999999999999999999999998766666666689999999999999865

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.24  E-value=9.9e-07  Score=94.07  Aligned_cols=51  Identities=12%  Similarity=0.171  Sum_probs=44.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++||||++. .       -|+..|.+|++||+|..
T Consensus         7 Y~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~-------~a~~~F~~i~~AyevLs   57 (372)
T PRK14296          7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-P-------DAHDKMVEINEAADVLL   57 (372)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------hHHHHHHHHHHHHHHhc
Confidence            456788899999999999999999999999863 1       27889999999999864

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.20  E-value=1.5e-06  Score=92.41  Aligned_cols=53  Identities=19%  Similarity=0.241  Sum_probs=45.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|...++..+||+||||+++++||||++...       -|+..|.+|++||+|...
T Consensus         6 y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~d   58 (365)
T PRK14285          6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-------EAESIFKEATEAYEVLID   58 (365)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH-------HHHHHHHHHHHHHHHHcC
Confidence            45678889999999999999999999999986421       378899999999999764

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.19  E-value=1.5e-06  Score=93.19  Aligned_cols=52  Identities=19%  Similarity=0.229  Sum_probs=45.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-++..+||+||||+++++||||++...       -|+..|.+|++||+|..
T Consensus        12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vLs   63 (392)
T PRK14279         12 YKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-------AAEERFKAVSEAHDVLS   63 (392)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            56788999999999999999999999999986421       37889999999999864

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.15  E-value=2.1e-06  Score=91.49  Aligned_cols=52  Identities=17%  Similarity=0.201  Sum_probs=44.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+|||++++++||||++...       .|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   58 (372)
T PRK14286          7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-------ESEEKFKEATEAYEILR   58 (372)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            45578888999999999999999999999986421       37889999999999975

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.14  E-value=2.2e-06  Score=88.52  Aligned_cols=51  Identities=14%  Similarity=0.131  Sum_probs=44.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-+++++||+||||+++++|||+++..        -|+..|.+||+||+|..
T Consensus         7 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~   57 (291)
T PRK14299          7 YAILGVPKNASQDEIKKAFKKLARKYHPDVNKSP--------GAEEKFKEINEAYTVLS   57 (291)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631        27789999999999975

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.13  E-value=2.2e-06  Score=91.53  Aligned_cols=48  Identities=19%  Similarity=0.187  Sum_probs=42.7

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      .-+++...++.++|||||||+++++||||++.          |...|.+|++||||..
T Consensus         8 ~il~v~~~As~~eikkayrkla~k~HpDkn~~----------~~ekfkei~~AyevLs   55 (337)
T KOG0712|consen    8 DILGVSPDASEEEIKKAYRKLALKYHPDKNPD----------AGEKFKEISQAYEVLS   55 (337)
T ss_pred             eeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----------HHHHHHHHHHHHHHhc
Confidence            34578889999999999999999999999983          7789999999999864

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.13  E-value=2.4e-06  Score=88.55  Aligned_cols=51  Identities=14%  Similarity=0.102  Sum_probs=44.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-+++...++.++||+||||+++++|||++...        .|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~--------~~~~~f~~i~~Ay~~L~   57 (306)
T PRK10266          7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--------DAEARFKEVAEAWEVLS   57 (306)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhh
Confidence            5667889999999999999999999999997521        48899999999999975

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.13  E-value=2.4e-06  Score=91.05  Aligned_cols=51  Identities=16%  Similarity=0.172  Sum_probs=45.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++||||++. .       -|+..|.+|++||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~a~~~f~~i~~Ay~~Ls   58 (378)
T PRK14283          8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-E-------GAEEKFKEISEAYAVLS   58 (378)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------cHHHHHHHHHHHHHHhc
Confidence            567789999999999999999999999999863 1       37889999999999975

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.13  E-value=2.5e-06  Score=91.29  Aligned_cols=52  Identities=15%  Similarity=0.121  Sum_probs=45.4

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-++..+||+||||+++++||||++...       .|+..|.+||+||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   59 (386)
T PRK14277          8 YEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-------EAEQKFKEINEAYEILS   59 (386)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhC
Confidence            56778999999999999999999999999986321       37889999999999975

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.12  E-value=2.6e-06  Score=91.40  Aligned_cols=52  Identities=17%  Similarity=0.154  Sum_probs=45.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus        12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   63 (389)
T PRK14295         12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-------KAEERFKEISEAYDVLS   63 (389)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------hHHHHHHHHHHHHHHHC
Confidence            56788999999999999999999999999986421       38899999999999974

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.12  E-value=2.7e-06  Score=90.22  Aligned_cols=52  Identities=15%  Similarity=0.215  Sum_probs=45.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-++..+||+||||+++++||||++..       ..|+..|.+|++||+|..
T Consensus         7 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~~L~   58 (371)
T PRK10767          7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-------KEAEEKFKEIKEAYEVLS   58 (371)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence            5677888899999999999999999999998632       138889999999999864

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.10  E-value=3.3e-06  Score=88.79  Aligned_cols=50  Identities=18%  Similarity=0.176  Sum_probs=44.6

Q ss_pred             ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      =+||...+++++||||||+.+|.+||||++.++       -|..-|..|.+||+|.+
T Consensus        10 lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP-------~A~ekFq~L~eAy~VL~   59 (296)
T KOG0691|consen   10 LLGISEDATDAEIKKAYRKKALQYHPDKNPGDP-------QAAEKFQELSEAYEVLS   59 (296)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            357889999999999999999999999998643       28999999999999975

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.09  E-value=3.1e-06  Score=90.46  Aligned_cols=51  Identities=18%  Similarity=0.124  Sum_probs=44.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-++.++||+||||+++++|||+++.    .    -|+..|.+|++||+|..
T Consensus         6 y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~----~----~a~~~f~~i~~Ay~vL~   56 (378)
T PRK14278          6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNPD----E----EAQEKFKEISVAYEVLS   56 (378)
T ss_pred             ceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc----H----HHHHHHHHHHHHHHHhc
Confidence            456788889999999999999999999999862    1    37889999999999974

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=3.4e-06  Score=90.07  Aligned_cols=51  Identities=16%  Similarity=0.135  Sum_probs=44.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++|||+++..        -|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~   57 (380)
T PRK14276          7 YDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP--------GAEEKYKEVQEAYETLS   57 (380)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------CHHHHHHHHHHHHHHhc
Confidence            4567888999999999999999999999998631        26788999999999965

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=3.5e-06  Score=89.44  Aligned_cols=52  Identities=17%  Similarity=0.227  Sum_probs=44.6

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=++|..-++.++||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~~~~~f~~~~~Ay~vL~   58 (366)
T PRK14294          7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-------EAEELFKEAAEAYEVLS   58 (366)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            45678888899999999999999999999986421       37889999999999875

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.07  E-value=3.8e-06  Score=89.59  Aligned_cols=51  Identities=18%  Similarity=0.111  Sum_probs=44.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++|||+++. .       -|+..|.+||+||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~-------~~~~~f~~i~~Ay~~L~   57 (371)
T PRK14287          7 YEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-P-------DAEDKFKEVKEAYDTLS   57 (371)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h-------hHHHHHHHHHHHHHHhC
Confidence            456788999999999999999999999999852 1       27789999999999974

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.07  E-value=3.9e-06  Score=89.93  Aligned_cols=52  Identities=19%  Similarity=0.222  Sum_probs=44.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=++|..-+++.+||+||||+++++|||+++...       .|+..|.+|++||+|..
T Consensus         4 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   55 (391)
T PRK14284          4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-------EAEKRFKEVSEAYEVLS   55 (391)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            45578888999999999999999999999987421       37889999999999964

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.06  E-value=3.4e-06  Score=93.15  Aligned_cols=55  Identities=20%  Similarity=0.233  Sum_probs=48.9

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.-+++..-++..+||+||||.|+.+||||+.    +++||-.|+.+|..|.+||||..
T Consensus        12 Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~----dpd~K~~AE~~F~~i~~AyEVLs   66 (546)
T KOG0718|consen   12 YALLNLPKDATDEEIKKAYRRLSRLFHPDKHT----DPDQKKAAEEKFQRIQRAYEVLS   66 (546)
T ss_pred             HHHhCCCcccCHHHHHHHHHHHHHhcCCcccC----ChhHHHHHHHHHHHHHHHHHHhc
Confidence            34567788899999999999999999999997    36899999999999999999863

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=3.9e-06  Score=89.48  Aligned_cols=51  Identities=14%  Similarity=0.171  Sum_probs=44.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++||||++..        -|+..|.+|++||+|..
T Consensus         7 y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~   57 (376)
T PRK14280          7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE--------GADEKFKEISEAYEVLS   57 (376)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhc
Confidence            4567888999999999999999999999998631        27789999999999975

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=4.2e-06  Score=89.42  Aligned_cols=52  Identities=13%  Similarity=0.148  Sum_probs=44.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      ++-++|..-++..+||+||||+++++||||++..        -|+..|..|++||+|...
T Consensus         6 Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vLsd   57 (382)
T PRK14291          6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNKNP--------EAEEKFKEINEAYQVLSD   57 (382)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------cHHHHHHHHHHHHHHhcC
Confidence            4567888899999999999999999999998631        267889999999999753

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=4.2e-06  Score=89.28  Aligned_cols=53  Identities=17%  Similarity=0.219  Sum_probs=45.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      ++-++|..-++..+||+||||+++++||||++...       .|+..|.+||+||+|...
T Consensus         7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~d   59 (380)
T PRK14297          7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-------EAEEKFKEINEAYQVLSD   59 (380)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHhcC
Confidence            45678888999999999999999999999986421       378899999999999753

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=4.5e-06  Score=89.74  Aligned_cols=52  Identities=19%  Similarity=0.257  Sum_probs=44.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++=++|..-++..+||+||||+++++||||++...       .|+..|.+||+||+|..
T Consensus         6 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   57 (397)
T PRK14281          6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-------EAEEHFKEVNEAYEVLS   57 (397)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhh
Confidence            45567888899999999999999999999986421       37789999999999975

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.04  E-value=4.4e-06  Score=90.92  Aligned_cols=48  Identities=19%  Similarity=0.219  Sum_probs=41.9

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-+++++||+||||+++++||||++.           +..|.+|++||+|..
T Consensus        31 Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----------~e~F~~i~~AYevLs   78 (421)
T PTZ00037         31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----------PEKFKEISRAYEVLS   78 (421)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----------HHHHHHHHHHHHHhc
Confidence            466788899999999999999999999999741           268999999999974

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.03  E-value=5e-06  Score=88.41  Aligned_cols=53  Identities=15%  Similarity=0.206  Sum_probs=45.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++|||+++..      .-.|+..|.+||+||+|..
T Consensus         7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vL~   59 (369)
T PRK14282          7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN------RKEAEQKFKEIQEAYEVLS   59 (369)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc------hhHHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631      1138899999999999964

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.02  E-value=5.5e-06  Score=88.44  Aligned_cols=52  Identities=17%  Similarity=0.217  Sum_probs=44.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+||||+++++||||++...       -|+..|..|++||+|..
T Consensus         7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   58 (373)
T PRK14301          7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-------EAEQKFKEAAEAYEVLR   58 (373)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            45667888899999999999999999999986421       37788999999999975

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.00  E-value=5.5e-06  Score=88.63  Aligned_cols=51  Identities=20%  Similarity=0.217  Sum_probs=44.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=++|..-++..+||+||||+++++|||+++. .       -|+..|.+||+||+|..
T Consensus         8 y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~vL~   58 (377)
T PRK14298          8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-P-------DAEEKFKEISEAYAVLS   58 (377)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-h-------hHHHHHHHHHHHHHHhc
Confidence            456788899999999999999999999999852 1       27789999999999964

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.99  E-value=7.1e-06  Score=85.62  Aligned_cols=51  Identities=22%  Similarity=0.204  Sum_probs=43.4

Q ss_pred             ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+|+...++..+|||+||++++++||||++...       -|...|++||+||+|.+.
T Consensus        36 VLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P-------~~~dkf~eIN~Ay~ILsD   86 (279)
T KOG0716|consen   36 VLGLPKTATKDEIKKAYRKLALKYHPDKNGDNP-------EATDKFKEINTAYAILSD   86 (279)
T ss_pred             HhCCCcccchHHHHHHHHHHHHHhCCCcCCCCc-------hhHHHHHHHHHHHHHhcC
Confidence            346777899999999999999999999997532       266889999999999874

>PRK14300 chaperone protein DnaJ; Provisional

Probab=97.99  E-value=6.7e-06  Score=87.64  Aligned_cols=51  Identities=18%  Similarity=0.135  Sum_probs=44.6

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-+++.+||+||||+++++|||+++. .       .|+..|.+|++||+|..
T Consensus         6 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~~L~   56 (372)
T PRK14300          6 YQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-K-------DAEKKFKEINAAYDVLK   56 (372)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------CHHHHHHHHHHHHHHhh
Confidence            677889999999999999999999999999862 1       26779999999999865

>PRK14292 chaperone protein DnaJ; Provisional

Probab=97.93  E-value=8.9e-06  Score=86.38  Aligned_cols=51  Identities=18%  Similarity=0.264  Sum_probs=43.8

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++=++|..-++..+||+||||+++++|||++...        .|+..|..||+||+|..
T Consensus         5 y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~--------~a~~~~~~i~~Ay~vL~   55 (371)
T PRK14292          5 YELLGVSRTASADEIKSAYRKLALKYHPDRNKEK--------GAAEKFAQINEAYAVLS   55 (371)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence            3456788889999999999999999999998631        37789999999999975

>PRK14290 chaperone protein DnaJ; Provisional

Probab=97.93  E-value=1e-05  Score=85.90  Aligned_cols=53  Identities=13%  Similarity=0.092  Sum_probs=45.2

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-+++..-++.++||+||||+++++|||+++..      ...|+..|..|++||+|..
T Consensus         6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~~L~   58 (365)
T PRK14290          6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN------KAEAEEKFKEISEAYEVLS   58 (365)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hhHHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999997631      1248899999999999975

>PRK14293 chaperone protein DnaJ; Provisional

Probab=97.89  E-value=1.4e-05  Score=85.30  Aligned_cols=51  Identities=18%  Similarity=0.191  Sum_probs=44.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+=+++...+++.+||+|||++++++|||+++..        .|+..|..|++||+|..
T Consensus         6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~a~~~f~~i~~Ay~vL~   56 (374)
T PRK14293          6 YEILGVSRDADKDELKRAYRRLARKYHPDVNKEP--------GAEDRFKEINRAYEVLS   56 (374)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHHHHHHHh
Confidence            5567888899999999999999999999998631        27789999999999975

>PHA03102 Small T antigen; Reviewed

Probab=97.89  E-value=1.4e-05  Score=77.23  Aligned_cols=45  Identities=18%  Similarity=0.090  Sum_probs=37.1

Q ss_pred             cccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          671 PLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       671 gmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      ||..-+  +..+||+|||++++.+||||..           .+..|.+||+||++...
T Consensus        12 Gl~~~A~~s~~eIKkAYr~la~~~HPDkgg-----------~~e~~k~in~Ay~~L~d   58 (153)
T PHA03102         12 GLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-----------DEEKMKELNTLYKKFRE   58 (153)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-----------hhHHHHHHHHHHHHHhh
Confidence            455556  8899999999999999999953           13588999999999864

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.87  E-value=1.9e-05  Score=72.25  Aligned_cols=52  Identities=19%  Similarity=0.188  Sum_probs=43.9

Q ss_pred             ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      =++|..-++..+||++|||+++++|||+++...   .   .|+..|..+++||+|..-
T Consensus        11 iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~---~---~a~~~f~~i~~Ay~vLsd   62 (237)
T COG2214          11 ILGVPPNASLEEIKKAYRKLALKYHPDRNPGDP---K---VAEEKFKEINEAYEILSD   62 (237)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---h---HHHHHHHHHHHHHHHhhC
Confidence            356667888999999999999999999998532   1   689999999999998753

>PRK14289 chaperone protein DnaJ; Provisional

Probab=97.84  E-value=1.7e-05  Score=84.70  Aligned_cols=52  Identities=17%  Similarity=0.215  Sum_probs=44.8

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-++|..-++..+||+||||+++++||||++...       .|+..|..|++||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~-------~a~~~f~~i~~Ay~~L~   59 (386)
T PRK14289          8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-------EAEEKFKEAAEAYDVLS   59 (386)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            46678888999999999999999999999986421       37889999999999875

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.82  E-value=2.2e-05  Score=80.96  Aligned_cols=54  Identities=19%  Similarity=0.244  Sum_probs=48.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.=+||..-+++..|++||+|+.|.+||||++     .|++.-|...|+.|+.||.|++
T Consensus        17 YevLGVer~a~~~eIrkAY~klal~~HPDk~~-----eed~~ea~~kFq~l~k~y~iLs   70 (264)
T KOG0719|consen   17 YEVLGVERDATDKEIRKAYHKLALRLHPDKNH-----EEDKVEATEKFQQLQKAYQILS   70 (264)
T ss_pred             HHHhhhcccCCHHHHHHHHHHHHHHhCCCcch-----hhhHHHHHHHHHHHHHHHHHhh
Confidence            45568888999999999999999999999986     4666789999999999999985

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.72  E-value=2.9e-05  Score=85.86  Aligned_cols=53  Identities=17%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.-++|..-+++.+||++|||++|.+||||++..   ++   -|..+|..|+.||+|..
T Consensus        11 YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~---ie---eat~~F~~i~aAYeVLS   63 (508)
T KOG0717|consen   11 YEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR---IE---EATQQFQLIQAAYEVLS   63 (508)
T ss_pred             HHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc---HH---HHHHHHHHHHHHHHHhc
Confidence            3456788889999999999999999999998632   22   48999999999999964

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=97.65  E-value=4.9e-05  Score=90.07  Aligned_cols=51  Identities=10%  Similarity=-0.075  Sum_probs=45.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.-+|+..-++..+||+||||+++++||||++..        .|...|..|++||+|..
T Consensus       576 YdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--------~A~ekFq~I~EAYeVLS  626 (1136)
T PTZ00341        576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN--------EGFHKFKKINEAYQILG  626 (1136)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHHHHHHHhC
Confidence            5778999999999999999999999999998641        27789999999999975

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=97.64  E-value=5e-05  Score=70.90  Aligned_cols=47  Identities=13%  Similarity=0.187  Sum_probs=40.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS  724 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf  724 (731)
                      ++-+++..-++.++||++||++++.+||||.   + +       ..+|..||+||++.
T Consensus        68 y~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---G-s-------~~~~~kIneAyevL  114 (116)
T PTZ00100         68 YKILNISPTASKERIREAHKQLMLRNHPDNG---G-S-------TYIASKVNEAKDLL  114 (116)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-C-------HHHHHHHHHHHHHH
Confidence            6778899999999999999999999999984   2 1       24678999999985

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=97.60  E-value=0.00011  Score=71.46  Aligned_cols=50  Identities=18%  Similarity=0.193  Sum_probs=41.6

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -++..+||++||+++..+||||....  +...+.+|...|..||+||+|...
T Consensus        14 ~~d~~~L~~~yr~l~~~~HPDk~~~~--~~~~~~~a~~~s~~iN~AY~~L~d   63 (171)
T PRK05014         14 DIDTQLLASRYQELQRQFHPDKFANA--SERERLLAVQQAATINDAYQTLKH   63 (171)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCCCCCC--cHHHHHHHHHHHHHHHHHHHHHCC
Confidence            47789999999999999999998753  234455788899999999999763

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.57  E-value=5.4e-05  Score=83.74  Aligned_cols=51  Identities=20%  Similarity=0.202  Sum_probs=45.4

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.-+|+..-++.++|||.|||.+..|||||+.+.        .|+.+|..|+.||+|--
T Consensus       238 YsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~--------~A~Eafk~Lq~Afevig  288 (490)
T KOG0720|consen  238 YSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP--------RAEEAFKKLQVAFEVIG  288 (490)
T ss_pred             hhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh--------hHHHHHHHHHHHHHHhc
Confidence            5667888889999999999999999999999753        59999999999999854

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=97.47  E-value=0.00021  Score=70.14  Aligned_cols=50  Identities=14%  Similarity=0.202  Sum_probs=42.0

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+++.+|+++||++...+||||..+.+  ...+.+|...+..||+||+|..+
T Consensus        19 ~~d~~~L~~~yr~lq~~~HPD~~~~~~--~~e~~~a~~~s~~iN~AY~tL~~   68 (176)
T PRK03578         19 ALDEAALDAAYRTVQAQVHPDRFAAAG--DAEKRVAMQWATRANEAYQTLRD   68 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHHHHHHHHHHHHhCC
Confidence            478899999999999999999997532  34455788889999999999875

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=97.47  E-value=0.00018  Score=69.27  Aligned_cols=49  Identities=18%  Similarity=0.171  Sum_probs=40.7

Q ss_pred             cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          676 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       676 vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +++.+|+++||++...+||||..+.+  ...+.+|...|..||+||+|...
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~--~~~~~~a~~~s~~iN~AY~~L~~   51 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGS--AQEQLAAVQQSTTLNQAYQTLKD   51 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCC--hhhhHHHHHHHHHHHHHHHHhCC
Confidence            57789999999999999999986533  33345788899999999999864

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.45  E-value=0.00016  Score=74.06  Aligned_cols=52  Identities=17%  Similarity=0.159  Sum_probs=42.8

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      .=+|+..-++.++||||||++.+++||||++...       --+.-|+.|++||+.-|.
T Consensus       103 EILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~-------~~e~~~~~I~KAY~aLTD  154 (230)
T KOG0721|consen  103 EILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEE-------GDEEFFEAIAKAYQALTD  154 (230)
T ss_pred             HhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcc-------hhHHHHHHHHHHHHHhcc
Confidence            4578999999999999999999999999987422       135678889999887764

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=97.42  E-value=0.00023  Score=69.88  Aligned_cols=50  Identities=10%  Similarity=0.085  Sum_probs=41.6

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -++..+|+++||++...+||||..+.+  ...+.+|...|..||+||+|...
T Consensus        17 ~id~~~L~~~Yr~Lq~~~HPDk~~~~~--~~e~~~a~~~s~~IN~AY~~L~~   66 (173)
T PRK00294         17 RLDLDQLATRYRELAREVHPDRFADAP--EREQRLALERSASLNEAYQTLKS   66 (173)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCc--HHHHHHHHHHHHHHHHHHHHhCC
Confidence            478899999999999999999987532  33345788889999999999764

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=97.40  E-value=0.00027  Score=68.74  Aligned_cols=53  Identities=15%  Similarity=0.075  Sum_probs=42.0

Q ss_pred             cccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          670 VPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       670 VgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      .||..-  ++..+|+++|+++.+.+||||...    ...+..|...|..||+||+|...
T Consensus         8 lgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~----~~~k~~~~~~s~~in~AY~~L~d   62 (166)
T PRK01356          8 LGLPQEYNIDLKILEKQYFAMQVKYHPDKAKT----LQEKEQNLIIASELNNAYSTLKD   62 (166)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence            344443  778999999999999999999752    34455677789999999999763

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.26  E-value=0.00035  Score=73.07  Aligned_cols=59  Identities=19%  Similarity=0.115  Sum_probs=50.2

Q ss_pred             ccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          660 ILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       660 VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +.|...-.+-+|+..-++..+||+||++++.++|||-+...        .|+..|++|.+||||..-
T Consensus        39 ~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--------~a~~kF~eI~~AYEiLsd   97 (288)
T KOG0715|consen   39 IISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--------EASKKFKEISEAYEILSD   97 (288)
T ss_pred             cCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chhhHHHHHHHHHHHhcC
Confidence            45544345778999999999999999999999999999753        589999999999999653

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.15  E-value=0.00054  Score=75.67  Aligned_cols=93  Identities=20%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             CCchhHhHHHHHHHHhhc----CCCCcHHHHHhcCccccCC---CCCccccccccccCchhHHHHHHHHHhhcCCCccCC
Q 004773          627 NDPQEFQAIDVQIRKWSN----GKEGNIRSLLSTLQYILWP---ASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQ  699 (731)
Q Consensus       627 ~~~~~~d~Id~KI~~Wa~----GKE~NIRALLSSLh~VLW~---~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q  699 (731)
                      +-|...++.+.-|+....    -+.-+||.+|--.+.-|=-   -.-++-+|+..+++...|||||||..|.+||||+..
T Consensus       329 ~c~l~le~~e~AV~d~~~a~q~~~s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ag  408 (486)
T KOG0550|consen  329 NCHLALEKWEEAVEDYEKAMQLEKDCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAG  408 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcc
Confidence            344555555555555442    3335688888776665531   112478899999999999999999999999999974


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          700 KGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       700 ~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      .      ++-|+..|+++-+||.|-.
T Consensus       409 s------q~eaE~kFkevgeAy~il~  428 (486)
T KOG0550|consen  409 S------QKEAEAKFKEVGEAYTILS  428 (486)
T ss_pred             h------hHHHHHHHHHHHHHHHHhc
Confidence            2      5679999999999999853

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.14  E-value=0.00048  Score=80.45  Aligned_cols=50  Identities=12%  Similarity=0.164  Sum_probs=42.7

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +=+||...++..+||++||++++++||||+.. .       .|+..|..|++||++..
T Consensus         6 eVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~-------eAeekFqeINEAYEVLS   55 (871)
T TIGR03835         6 EVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-P-------DAASIFAEINEANDVLS   55 (871)
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h-------hHHHHHHHHHHHHHHhC
Confidence            44677888999999999999999999999863 1       36788999999999875

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.12  E-value=0.00048  Score=70.34  Aligned_cols=51  Identities=18%  Similarity=0.275  Sum_probs=42.5

Q ss_pred             ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      -+.|..-++-.+||+-||++.+.|||||++.+   .   .-|++.|++|..||.+..
T Consensus        58 VLqIdpev~~edikkryRklSilVHPDKN~Dd---~---~rAqkAFdivkKA~k~l~  108 (250)
T KOG1150|consen   58 VLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD---A---ERAQKAFDIVKKAYKLLE  108 (250)
T ss_pred             HHhcCCCCCHHHHHHHHHhhheeecCCCCccc---H---HHHHHHHHHHHHHHHHHh
Confidence            34566678889999999999999999999853   1   269999999999998764

>PHA02624 large T antigen; Provisional

Probab=97.04  E-value=0.00054  Score=78.60  Aligned_cols=47  Identities=15%  Similarity=0.024  Sum_probs=38.2

Q ss_pred             cccccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          669 PVPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       669 pVgmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+|+..-+  +..+||+||||+++++||||..           ++..|.+||+||++...
T Consensus        16 lLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-----------deekfk~Ln~AYevL~d   64 (647)
T PHA02624         16 LLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-----------DEEKMKRLNSLYKKLQE   64 (647)
T ss_pred             HcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-----------cHHHHHHHHHHHHHHhc
Confidence            34555556  8899999999999999999952           24679999999999864

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=96.90  E-value=0.00076  Score=65.26  Aligned_cols=48  Identities=21%  Similarity=0.241  Sum_probs=37.7

Q ss_pred             cccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhh
Q 004773          670 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLI  723 (731)
Q Consensus       670 VgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEV  723 (731)
                      +++..-++..+||+||+++++++||||+..     . +..|+..|.++++||+|
T Consensus         9 l~i~~~as~~~i~ka~~~~a~~~hpdk~~~-----~-~~~~~~~~~~~~ea~~~   56 (306)
T KOG0714|consen    9 LGIARSASEEDIKKAYRKLALKYHPDKNPS-----P-KEVAEAKFKEIAEAYEV   56 (306)
T ss_pred             hCccccccHHHHHHHHHHHHHhhCCCCCCC-----c-hhhHHHHHhhhhccccc
Confidence            345555566699999999999999999653     2 44577799999999884

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=96.35  E-value=0.0037  Score=69.92  Aligned_cols=83  Identities=17%  Similarity=0.110  Sum_probs=60.0

Q ss_pred             HHHhhcC--CCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHH
Q 004773          639 IRKWSNG--KEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIF  716 (731)
Q Consensus       639 I~~Wa~G--KE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~e  716 (731)
                      |-.|.-=  ---|||. |.-+-.=+|+  -+.=+|++.-....+||++||++..+.||||++.  ...+.+-.-+..+.+
T Consensus        74 ivgWl~i~~L~~~I~~-~k~~~~~~fD--PyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~--mvn~~rse~Ee~y~~  148 (610)
T COG5407          74 IVGWLVISYLISNIRT-LKIEYRRGFD--PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP--MVNELRSEYEEKYKT  148 (610)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHcCCC--hHHhhcccCCCcHHHHHHHHHhheeecChhhcCC--CChhHHHHHHHHHHH
Confidence            5677630  0123444 3333344553  2455788999999999999999999999999985  445666778899999


Q ss_pred             HHHHHhhhhc
Q 004773          717 CRRHGLISTH  726 (731)
Q Consensus       717 LNEAYEVf~~  726 (731)
                      +++||+..|.
T Consensus       149 ItkAY~~lTd  158 (610)
T COG5407         149 ITKAYGLLTD  158 (610)
T ss_pred             HHHHHHhhhh
Confidence            9999998764

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=96.18  E-value=0.0049  Score=65.30  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=27.9

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccC
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ  698 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~  698 (731)
                      +-++|..-++.++||+|||++++++||||++
T Consensus         4 ~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~   34 (354)
T TIGR02349         4 EILGVSKDASEEEIKKAYRKLAKKYHPDRNK   34 (354)
T ss_pred             HhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence            4567888899999999999999999999986

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=95.83  E-value=0.0088  Score=72.08  Aligned_cols=39  Identities=18%  Similarity=0.257  Sum_probs=34.5

Q ss_pred             CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          677 EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       677 tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      .+++||++|+|++.++||||++.          ....|..+|+|||...
T Consensus      1298 ~~~KirrqY~kLA~kYHPDKNPE----------GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPE----------GREMFERVNKAYELLS 1336 (2235)
T ss_pred             cHHHHHHHHHHHHHHhCCCCCch----------HHHHHHHHHHHHHHHH
Confidence            35899999999999999999983          4689999999999865

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=95.42  E-value=0.028  Score=55.48  Aligned_cols=50  Identities=16%  Similarity=0.187  Sum_probs=42.4

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+++.++++.|+.+-..+||||..+.  +..++.+|...=..||+||.|...
T Consensus        15 ~iD~~~L~~~y~~Lq~~~HPD~f~~~--~~~eq~~a~~~ss~iN~AY~tLkd   64 (173)
T PRK01773         15 QLDNALLSERYLALQKSLHPDNFANS--SAQEQRLAMQKSAEVNDALQILKD   64 (173)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCcccCC--CHHHHHHHHHHHHHHHHHHHHHCC
Confidence            47889999999999999999999764  355556788888999999999764

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=95.40  E-value=0.0097  Score=62.92  Aligned_cols=50  Identities=12%  Similarity=0.224  Sum_probs=42.6

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS  724 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf  724 (731)
                      ..-+|++.-+...+|+||||++++.+|||+++..    |    ++..|..+..||++.
T Consensus        36 YdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~----e----~k~~F~~iAtayeil   85 (329)
T KOG0722|consen   36 YDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP----E----SKKLFVKIATAYEIL   85 (329)
T ss_pred             HHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc----h----hhhhhhhhhcccccc
Confidence            4556888888899999999999999999999853    2    448899999999875

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=94.94  E-value=0.029  Score=61.76  Aligned_cols=55  Identities=20%  Similarity=0.234  Sum_probs=49.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +|=+|+-.-+.-.+|-|||||++.++|||--+.    .|.|-.|++.|+-|..|.||.+
T Consensus       397 YKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqd----EeEKKkAEKKFIDIAAAKEVLs  451 (504)
T KOG0624|consen  397 YKILGVKRNASKQEITKAYRKLAQKWHPDNFQD----EEEKKKAEKKFIDIAAAKEVLS  451 (504)
T ss_pred             HHHhhhcccccHHHHHHHHHHHHHhcCCccccC----HHHHHHHHHhhhhHHHHHHhhc
Confidence            677889999999999999999999999999863    5667899999999999999976

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=91.81  E-value=0.27  Score=46.40  Aligned_cols=45  Identities=18%  Similarity=0.339  Sum_probs=37.2

Q ss_pred             cccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          670 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       670 VgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +++..-++.++||.|.||+.+.-|||+-.+       .|||.+    +|||+++..
T Consensus        62 L~v~~s~~k~KikeaHrriM~~NHPD~GGS-------PYlAsK----INEAKdlLe  106 (112)
T KOG0723|consen   62 LGVTPSLDKDKIKEAHRRIMLANHPDRGGS-------PYLASK----INEAKDLLE  106 (112)
T ss_pred             hCCCccccHHHHHHHHHHHHHcCCCcCCCC-------HHHHHH----HHHHHHHHh
Confidence            467788899999999999999999999753       377764    699998764

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=89.59  E-value=0.43  Score=51.38  Aligned_cols=47  Identities=13%  Similarity=0.164  Sum_probs=38.7

Q ss_pred             cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhcc
Q 004773          676 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHL  727 (731)
Q Consensus       676 vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~~  727 (731)
                      ++|.||+++.+|-++++||||... +++.    -|...|..|+.||+|.+.-
T Consensus        58 a~~~qi~kah~kkv~kyHPDk~aa-~g~~----~~d~fFk~iqkA~evL~D~  104 (379)
T COG5269          58 AIPPQILKAHKKKVYKYHPDKTAA-GGNK----GCDEFFKLIQKAREVLGDR  104 (379)
T ss_pred             CCcHHHHHHHHHHHHHhCccchhc-cCCC----CcHHHHHHHHHHHHHhccH
Confidence            578899999999999999999843 3333    2678999999999998754

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=89.46  E-value=0.35  Score=47.16  Aligned_cols=56  Identities=23%  Similarity=0.167  Sum_probs=45.9

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhh
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLI  723 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEV  723 (731)
                      +-.++..-.+...||++|++++-..|||++...+..++--.+++..+..|++||+.
T Consensus       117 ~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~  172 (174)
T COG1076         117 KVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED  172 (174)
T ss_pred             HHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh
Confidence            44455556677899999999999999999988765555555799999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	731
3ag7_A	106	An Auxilin-Like J-Domain Containing Protein, Jac1 J		4e-33
1n4c_A	182	Nmr Structure Of The J-Domain And Clathrin Substrat		2e-11
1xi5_J	114	Clathrin D6 Coat With Auxilin J-Domain Length = 114		2e-10
2qwn_B	94	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-09
2qwo_B	92	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-09
1nz6_A	101	Crystal Structure Of Auxilin J-Domain Length = 101		2e-09

>pdb|3AG7|A Chain A, An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain Length = 106

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 630 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKAL 689
           +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+AL
Sbjct: 6   EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65
Query: 690 LCLHPDKLQQKGATCQQTYIAEKVL 714
           L LHPDKLQQKGA+  Q Y+AEKV 
Sbjct: 66  LILHPDKLQQKGASANQKYMAEKVF 90

>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate Binding Domain Of Bovine Auxilin Length = 182

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 637 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 695
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 89  LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 148
Query: 696 K 696
           K
Sbjct: 149 K 149

>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain Length = 114

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 630 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKA 688
           +E     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA
Sbjct: 14  KEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 73
Query: 689 LLCLHPDK 696
           +L +HPDK
Sbjct: 74  VLVVHPDK 81

>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 94

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 628 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQ 686
           DP++     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+
Sbjct: 2   DPEK-----LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYR 56
Query: 687 KALLCLHPDK 696
           KA+L +HP K
Sbjct: 57  KAVLVVHPCK 66

>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi Form #1 Length = 92

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 628 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQ 686
           DP++     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+
Sbjct: 1   DPEK-----LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYR 55
Query: 687 KALLCLHPDK 696
           KA+L +HP K
Sbjct: 56  KAVLVVHPCK 65

>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain Length = 101

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 630 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKA 688
           +E     ++I +W  GKE NIR+LLST   +LW   + WKPV   D++    VK+ Y+KA
Sbjct: 1   KEMDPEKLKILEWIEGKERNIRALLSTXHTVLWAGETKWKPVGXADLVTPEQVKKVYRKA 60
Query: 689 LLCLHPDK 696
           +L +HPDK
Sbjct: 61  VLVVHPDK 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	731
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	8e-29
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	9e-24
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	3e-20
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score =  109 bits (274), Expect = 8e-29
 Identities = 63/84 (75%), Positives = 74/84 (88%)

Query: 630 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKAL 689
           +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+AL
Sbjct: 6   EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65

Query: 690 LCLHPDKLQQKGATCQQTYIAEKV 713
           L LHPDKLQQKGA+  Q Y+AEKV
Sbjct: 66  LILHPDKLQQKGASANQKYMAEKV 89

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 95.1 bits (236), Expect = 9e-24
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)

Query: 635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLH 693
             ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +H
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 694 PDKLQQKGATCQQTYIAEKV 713
           P K   +         A+ +
Sbjct: 63  PCKATGQ----PYEQYAKMI 78

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 88.0 bits (217), Expect = 3e-20
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 572 TTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQE 631
           + + M  G  E   +++   G   + +  D+      N+  ++         +     +E
Sbjct: 24  SFSSMPGGQNERGKAAANLEGKQKAADFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKE 83

Query: 632 FQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALL 690
                ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L
Sbjct: 84  MDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVL 143

Query: 691 CLHPDKLQQKGATCQQTYIAEKV 713
            +HPDK   +         A+ +
Sbjct: 144 VVHPDKATGQ----PYEQYAKMI 162

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 46/350 (13%), Positives = 93/350 (26%), Gaps = 120/350 (34%)

Query: 416 HYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKK----QDV---------KRECGE 462
           H+   + E        E + +      ++  F          +DV         K E   
Sbjct: 3   HHHHMDFETG------EHQYQYKD---ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH 53

Query: 463 VGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSK------SKINVDPQSKSSRWK 516
           +         ++        +  K +E V+ F +E L        S I  + +  S   +
Sbjct: 54  IIM---SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR 110

Query: 517 GTGNSKPEKDANFSKIAPDG------KIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAAT 570
                + ++  N +++             K  +   +  P   ++++G            
Sbjct: 111 -MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG------------ 157

Query: 571 NTTNHMSNGTPEWKDSSSTESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQ 630
                +                G+G        K+     +   V        K+    +
Sbjct: 158 -----V---------------LGSG--------KT----WVALDVCLSYKVQCKMDF--K 183

Query: 631 EFQAIDVQIRKWSN-GKEGNIRSLLSTLQ---YILWP-----ASGWKPVPLVDIIEGNAV 681
            F         W N     +  ++L  LQ   Y + P     +     + L  I    A 
Sbjct: 184 IF---------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL-RIHSIQAE 233

Query: 682 KR------SYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725
            R       Y+  LL L    +Q                + C+   L++T
Sbjct: 234 LRRLLKSKPYENCLLVL--LNVQNAK-------AWNAFNLSCKI--LLTT 272

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	731
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.92
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.9
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.84
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	98.67
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	98.65
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	98.56
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	98.54
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	98.53
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	98.52
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	98.52
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	98.49
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	98.48
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	98.46
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	98.45
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	98.43
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	98.41
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	98.38
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	98.36
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	98.35
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	98.34
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	98.33
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	98.32
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	98.28
2guz_A	71	Mitochondrial import inner membrane translocase su	98.2
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	98.2
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	98.18
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	98.15
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	98.1
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	98.08
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	97.84
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	97.73
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	97.62
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	97.19
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	96.72
2guz_B	65	Mitochondrial import inner membrane translocase su	96.63

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.92  E-value=2.4e-26  Score=200.89  Aligned_cols=89  Identities=33%  Similarity=0.571  Sum_probs=82.8

Q ss_pred             hHHHHHHHHhhcCCCCcHHHHHhcCccccCCC-CCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHH
Q 004773          633 QAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE  711 (731)
Q Consensus       633 d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~-s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe  711 (731)
                      |.|++||+.|++||++|||+||+|||.|||++ +.|+.+||...+++.+||+||||+++++||||++..    +++++|+
T Consensus         1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~----~~~~~A~   76 (92)
T 2qwo_B            1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ----PYEQYAK   76 (92)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTS----TTHHHHH
T ss_pred             ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----hhHhHHH
Confidence            57999999999999999999999999999995 999999999999999999999999999999999742    3446899


Q ss_pred             HHHHHHHHHHhhhh
Q 004773          712 KVLIFCRRHGLIST  725 (731)
Q Consensus       712 ~VF~eLNEAYEVf~  725 (731)
                      .+|.+|++||+|+.
T Consensus        77 ~~F~~i~eAyevL~   90 (92)
T 2qwo_B           77 MIFMELNDAWSEFE   90 (92)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999985

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.90  E-value=3e-24  Score=190.52  Aligned_cols=99  Identities=64%  Similarity=1.023  Sum_probs=93.3

Q ss_pred             CchhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhH
Q 004773          628 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQT  707 (731)
Q Consensus       628 ~~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk  707 (731)
                      -+++++.|+.+|+.|++||++|||+||++|+.+||++..|-.|.+.+.+++.+||+||||+++++||||++..+++.+++
T Consensus         4 ~~~~~~~~~~~i~~W~~~~~~~ir~lL~~l~~~l~~~~d~Y~vl~~~~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~   83 (106)
T 3ag7_A            4 GSEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQK   83 (106)
T ss_dssp             CHHHHHHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTSCCCCCCGGGSCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHH
T ss_pred             hHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcccCCHHHHcCCCCCCHHHHHHHHHHHHHHHCcCcCCCcccchhhH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999998766678999


Q ss_pred             HHHHHHHHHHHHHHhhhhc
Q 004773          708 YIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       708 ~IAe~VF~eLNEAYEVf~~  726 (731)
                      ++|+..|..|++||+|+..
T Consensus        84 ~~A~~~F~~I~~AYevLsd  102 (106)
T 3ag7_A           84 YMAEKVFELLQEAWDHFNT  102 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999864

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.84  E-value=8e-22  Score=190.38  Aligned_cols=107  Identities=31%  Similarity=0.539  Sum_probs=91.2

Q ss_pred             hhhhhHHHHhcCCCchhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCC-CCCccccccccccCchhHHHHHHHHHhhcC
Q 004773          615 VTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWP-ASGWKPVPLVDIIEGNAVKRSYQKALLCLH  693 (731)
Q Consensus       615 l~q~~nk~~~~~~~~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~-~s~WKpVgmsDLvtPaqVKKAYRKAiLkvH  693 (731)
                      .+++.++++++++ .+.+|.|+.+|..|+.|+++|||+||++|++|||+ ..-|+-++|...++..+||+||||+++++|
T Consensus        68 ~~~~~~~~r~~~~-a~~~D~l~~~i~~W~~gk~~niRaLLssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~H  146 (182)
T 1n4c_A           68 GPRTIAEMRKEEM-AKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH  146 (182)
T ss_dssp             CCCCTHHHHHHHH-HTCCCTTTHHHHHHHHHHTTCHHHHHHHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTC
T ss_pred             CcchHHHHHHHHH-HHhccHHHHHHHHHHcccHHHHHHHHHHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHC
Confidence            3445555555444 34567888899999999999999999999999998 478999999999999999999999999999


Q ss_pred             CCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          694 PDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       694 PDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |||++..  ..+  ++|+.+|..|++||+|+..
T Consensus       147 PDK~~~~--~~e--~~A~~~F~~I~eAYevLsD  175 (182)
T 1n4c_A          147 PDKATGQ--PYE--QYAKMIFMELNDAWSEFEN  175 (182)
T ss_dssp             GGGGSSC--TTH--HHHHHHHHHHHHHHHHHHH
T ss_pred             cCcCCCc--chH--HHHHHHHHHHHHHHHHHCC
Confidence            9999742  223  4899999999999999864

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.67  E-value=1e-08  Score=87.64  Aligned_cols=52  Identities=21%  Similarity=0.317  Sum_probs=45.1

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||+|||++++.+||||++..+        |+..|..|++||+|...
T Consensus        30 y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~--------~~~~f~~i~~Ay~~L~d   81 (90)
T 2ys8_A           30 WDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLK   81 (90)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT--------HHHHHHHHHHHHHHHHH
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc--------HHHHHHHHHHHHHHHCC
Confidence            56668888899999999999999999999997532        66789999999999865

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=98.65  E-value=2e-08  Score=85.10  Aligned_cols=59  Identities=19%  Similarity=0.149  Sum_probs=50.6

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |.-++|..-++..+||+|||++++.+||||++. ..+.+.+..|+..|..|++||+|...
T Consensus        19 y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~-~~~~~~~~~~~~~f~~i~~Ay~~L~d   77 (94)
T 1wjz_A           19 YSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILGN   77 (94)
T ss_dssp             HHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCT-TCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-CCChhhhHHHHHHHHHHHHHHHHHCC
Confidence            567788888999999999999999999999974 33456667899999999999999753

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.56  E-value=4.9e-08  Score=84.20  Aligned_cols=53  Identities=19%  Similarity=0.117  Sum_probs=44.0

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +=+++..-++..+||+|||++++.+||||++..      ...|+..|..|++||+|...
T Consensus        20 ~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~------~~~a~~~F~~I~~AYevL~~   72 (88)
T 1iur_A           20 SVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN------HDIANEVFKHLQNEINRLEK   72 (88)
T ss_dssp             HHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHHHHh
Confidence            345667778999999999999999999998631      13588999999999999764

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.5e-08  Score=79.83  Aligned_cols=53  Identities=11%  Similarity=0.119  Sum_probs=45.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |.-++|..-++..+||++||++++.+||||++...       .|+..|..|++||+|...
T Consensus        10 y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~-------~a~~~f~~i~~Ay~~L~d   62 (79)
T 2dn9_A           10 YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDP-------KAKEKFSQLAEAYEVLSD   62 (79)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCT-------THHHHHHHHHHHHHHHHS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence            45567888899999999999999999999987422       378899999999999753

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.53  E-value=7.1e-08  Score=79.41  Aligned_cols=52  Identities=21%  Similarity=0.264  Sum_probs=44.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |.-++|..-++..+||++|+++++.+||||++..        .|+..|..|++||+|...
T Consensus         6 y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~d   57 (77)
T 1hdj_A            6 YQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--------GAEEKFKEIAEAYDVLSD   57 (77)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--------THHHHHHHHHHHHHHTTC
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence            4556788889999999999999999999998742        277899999999999753

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=7.9e-08  Score=83.18  Aligned_cols=53  Identities=11%  Similarity=0.167  Sum_probs=45.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||+|||++++.+||||+....       .|+..|..|++||+|...
T Consensus        20 Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d   72 (99)
T 2yua_A           20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSA-------EAAERFTRISQAYVVLGS   72 (99)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCS-------HHHHHHHHHHHHHHHTTS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence            46678888899999999999999999999987421       378899999999999753

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=98.52  E-value=8.3e-08  Score=81.30  Aligned_cols=52  Identities=21%  Similarity=0.254  Sum_probs=45.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++..        .|+..|..|++||+|...
T Consensus        20 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d   71 (88)
T 2cug_A           20 YRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP--------GAEDRFIQISKAYEILSN   71 (88)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST--------THHHHHHHHHHHHHHHHS
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHHCC
Confidence            5677888889999999999999999999998742        277899999999999763

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.2e-07  Score=78.80  Aligned_cols=54  Identities=20%  Similarity=0.254  Sum_probs=45.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++..      ...|+..|..|++||+|...
T Consensus        12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d   65 (82)
T 2ej7_A           12 YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN------KEEAERRFKQVAEAYEVLSD   65 (82)
T ss_dssp             HHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT------HHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHHCC
Confidence            4556788889999999999999999999998631      23688999999999999764

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.48  E-value=1.4e-07  Score=80.27  Aligned_cols=54  Identities=20%  Similarity=0.256  Sum_probs=45.4

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++..      ...|+..|..|++||+|...
T Consensus        12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d   65 (92)
T 2dmx_A           12 YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN------KEEAEKKFKLVSEAYEVLSD   65 (92)
T ss_dssp             HHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC------SHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence            4556777888999999999999999999998642      13688999999999999753

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=9.2e-08  Score=81.03  Aligned_cols=52  Identities=15%  Similarity=0.130  Sum_probs=44.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++.        ..|+..|..|++||+|...
T Consensus        10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~~L~d   61 (88)
T 2ctr_A           10 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--------PDAEAKFREIAEAYETLSD   61 (88)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--------HHHHHHHHHHHHHHHHHHS
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--------hHHHHHHHHHHHHHHHHCC
Confidence            455677778999999999999999999999863        1478999999999999764

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=1e-07  Score=78.66  Aligned_cols=52  Identities=15%  Similarity=0.204  Sum_probs=43.9

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |.-++|..-++..+||++|+++++.+||||+...        .|+..|..|++||+|...
T Consensus        10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d   61 (78)
T 2ctp_A           10 YEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP--------GATEAFKAIGTAYAVLSN   61 (78)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH--------HHHHHHHHHHHHHHHHTS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence            4456777778999999999999999999998631        378899999999999754

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=98.43  E-value=1.5e-07  Score=82.91  Aligned_cols=53  Identities=25%  Similarity=0.241  Sum_probs=45.4

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++..   .    .|+..|..|++||+|...
T Consensus        20 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~----~a~~~f~~i~~Ay~vL~d   72 (109)
T 2ctw_A           20 YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN---P----EAADKFKEINNAHAILTD   72 (109)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC---H----HHHHHHHHHHHHHHHHTC
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---H----HHHHHHHHHHHHHHHHcC
Confidence            5667888889999999999999999999998742   1    378999999999999753

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.41  E-value=1.9e-07  Score=82.49  Aligned_cols=52  Identities=15%  Similarity=0.139  Sum_probs=45.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      ++-++|..-++..+||+|||++++.+||||++...       .|+..|..|++||+|..
T Consensus        23 Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~vL~   74 (112)
T 2ctq_A           23 YTLLGCDELSSVEQILAEFKVRALECHPDKHPENP-------KAVETFQKLQKAKEILT   74 (112)
T ss_dssp             HHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCS-------THHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHC
Confidence            46678888999999999999999999999997422       27899999999999975

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=98.38  E-value=3.2e-07  Score=80.32  Aligned_cols=56  Identities=11%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             cccccccccc-CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDII-EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLv-tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +.-+||..-+ +..+||+|||++++.+||||++.    .+.+..|+..|..|++||+|...
T Consensus        18 y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~----~~~~~~a~~~f~~i~~AY~~L~d   74 (109)
T 2qsa_A           18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN----KEEKLLAEERFRVIATAYETLKD   74 (109)
T ss_dssp             HHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS----HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----ccccHHHHHHHHHHHHHHHHHCC
Confidence            5677888878 99999999999999999999864    34556799999999999999753

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=98.36  E-value=1.6e-07  Score=81.54  Aligned_cols=53  Identities=17%  Similarity=0.251  Sum_probs=44.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++...       .|+..|..|++||+|...
T Consensus         6 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d   58 (103)
T 1bq0_A            6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-------EAEAKFKEIKEAYEVLTD   58 (103)
T ss_dssp             TTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTC-------THHHHHHHHTTTTTSTTC
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHCC
Confidence            45567788899999999999999999999987422       377899999999998753

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=98.35  E-value=4.6e-07  Score=79.06  Aligned_cols=53  Identities=19%  Similarity=0.239  Sum_probs=44.6

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +-++|..-++..+||++||++++.+||||++..      +..|+..|..|++||+|...
T Consensus         6 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~~a~~~f~~I~~AY~vL~d   58 (99)
T 2lgw_A            6 EILDVPRSASADDIKKAYRRKALQWHPDKNPDN------KEFAEKKFKEVAEAYEVLSD   58 (99)
T ss_dssp             HHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC------CHHHHHHHHHHHHHHHHHHS
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence            446777788999999999999999999998642      23688999999999999753

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=98.34  E-value=5.4e-07  Score=83.10  Aligned_cols=58  Identities=19%  Similarity=0.131  Sum_probs=48.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +.=+||..-++..+||+|||++++.+||||..... ..+.+..|...|..|++||+|..
T Consensus        13 y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~-~~~~~~~a~~~f~~i~~Ay~~L~   70 (155)
T 2l6l_A           13 YSILGADPSANISDLKQKYQKLILMYHPDKQSTDV-PAGTVEECVQKFIEIDQAWKILG   70 (155)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCC-TTHHHHHHHHHHHHHHHHHHHSS
T ss_pred             hHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-chhHHHHHHHHHHHHHHHHHHcC
Confidence            34457777888999999999999999999998632 34556689999999999999975

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=98.33  E-value=3.3e-07  Score=74.90  Aligned_cols=50  Identities=18%  Similarity=0.246  Sum_probs=42.8

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-+||..-++..+||++|+++++.+||||++.          +...|..|++||+|...
T Consensus        11 y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~----------~~~~f~~i~~Ay~~L~d   60 (73)
T 2och_A           11 YDVLGVKPDASDNELKKAYRKMALKFHPDKNPD----------GAEQFKQISQAYEVLSD   60 (73)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT----------CHHHHHHHHHHHHHHTS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC----------HHHHHHHHHHHHHHHCC
Confidence            456788888999999999999999999999863          13689999999999753

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=98.32  E-value=3.1e-07  Score=77.21  Aligned_cols=47  Identities=17%  Similarity=0.089  Sum_probs=39.2

Q ss_pred             ccccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          669 PVPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       669 pVgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+||..-  ++..+||+|||++++.+||||...           ...|..||+||+|...
T Consensus        16 iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----------~~~f~~i~~AYe~L~~   64 (79)
T 1faf_A           16 LLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----------HALMQELNSLWGTFKT   64 (79)
T ss_dssp             HHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----------HHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----------HHHHHHHHHHHHHHhh
Confidence            3466666  889999999999999999999641           3579999999999764

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=98.28  E-value=4.7e-07  Score=77.41  Aligned_cols=50  Identities=20%  Similarity=0.208  Sum_probs=42.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++..+||++||++++.+||||++..          ...|..|++||+|...
T Consensus        11 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----------~~~f~~i~~Ay~~L~d   60 (92)
T 2o37_A           11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----------TEKFKEISEAFEILND   60 (92)
T ss_dssp             HHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----------HHHHHHHHHHHHHHTS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----------HHHHHHHHHHHHHHCC
Confidence            4556777789999999999999999999998641          2489999999999764

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.20  E-value=9.1e-07  Score=72.80  Aligned_cols=47  Identities=17%  Similarity=0.153  Sum_probs=38.7

Q ss_pred             ccccccc-ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          668 KPVPLVD-IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       668 KpVgmsD-LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +=+||.. -++..+||++||++++.+||||..    +       ...|..||+||++..
T Consensus        18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g----~-------~~~f~~i~~Aye~L~   65 (71)
T 2guz_A           18 QILNLTENTLTKKKLKEVHRKIMLANHPDKGG----S-------PFLATKINEAKDFLE   65 (71)
T ss_dssp             HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC----C-------HHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC----C-------HHHHHHHHHHHHHHh
Confidence            3456666 588999999999999999999952    1       248999999999975

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=98.20  E-value=1.5e-06  Score=82.55  Aligned_cols=54  Identities=17%  Similarity=0.109  Sum_probs=44.5

Q ss_pred             cccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          671 PLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       671 gmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+..-+  +..+||++||++++.+||||++..  +...+..|...|..||+||+|...
T Consensus         8 gl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~--~~~e~~~a~~~f~~In~AY~vL~d   63 (171)
T 1fpo_A            8 GLPARYQLDTQALSLRFQDLQRQYHPDKFASG--SQAEQLAAVQQSATINQAWQTLRH   63 (171)
T ss_dssp             TCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTS--CHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHcC
Confidence            455444  899999999999999999999853  344556899999999999999763

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=98.18  E-value=1.1e-06  Score=81.84  Aligned_cols=50  Identities=18%  Similarity=0.220  Sum_probs=42.6

Q ss_pred             ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      =+|+..-++..+||+|||++++.+||||++...       .|+..|..|++||+|..
T Consensus         7 ~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~-------~~~~~f~~i~~Ay~~L~   56 (210)
T 3apq_A            7 LLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-------NAHGDFLKINRAYEVLK   56 (210)
T ss_dssp             HHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCT-------THHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHhC
Confidence            356777789999999999999999999987432       27789999999999875

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=98.10  E-value=9.9e-07  Score=79.39  Aligned_cols=46  Identities=20%  Similarity=0.130  Sum_probs=39.0

Q ss_pred             cccccccCc--hhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          670 VPLVDIIEG--NAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       670 VgmsDLvtP--aqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +||..-++.  .+||+|||++++.+||||++.           +..|..|++||+|...
T Consensus        14 Lgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----------~e~f~~I~~AYevL~d   61 (114)
T 1gh6_A           14 LGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED   61 (114)
T ss_dssp             TTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----------TTTTHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----------HHHHHHHHHHHHHHCC
Confidence            567777777  999999999999999999753           2579999999999753

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=98.08  E-value=3.4e-06  Score=82.57  Aligned_cols=83  Identities=14%  Similarity=0.182  Sum_probs=58.0

Q ss_pred             HhhcCCC---CcHHHHHhcCccccCC-CCC---ccccccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHH
Q 004773          641 KWSNGKE---GNIRSLLSTLQYILWP-ASG---WKPVPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE  711 (731)
Q Consensus       641 ~Wa~GKE---~NIRALLSSLh~VLW~-~s~---WKpVgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe  711 (731)
                      =|..|..   -+...++|..-.++.+ ...   +.=+||..-  ++..+||++||++++.+||||++..  +...+..|.
T Consensus        13 Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~--~~~e~~~a~   90 (207)
T 3bvo_A           13 CWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQR--SQTEKDFSE   90 (207)
T ss_dssp             CSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTS--CHHHHHHHH
T ss_pred             CCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHH
Confidence            3666654   3334455543333333 222   345667664  6889999999999999999999753  244556799


Q ss_pred             HHHHHHHHHHhhhh
Q 004773          712 KVLIFCRRHGLIST  725 (731)
Q Consensus       712 ~VF~eLNEAYEVf~  725 (731)
                      ..|..||+||+|..
T Consensus        91 ~~f~~In~AY~vLs  104 (207)
T 3bvo_A           91 KHSTLVNDAYKTLL  104 (207)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHC
Confidence            99999999999976

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=97.84  E-value=2.2e-06  Score=88.75  Aligned_cols=52  Identities=13%  Similarity=0.093  Sum_probs=0.0

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      |+-++|..-++.++||+||||+++++||||++..        .|+..|.+|++||+|...
T Consensus        31 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--------~a~~~f~~i~~Ay~vL~d   82 (329)
T 3lz8_A           31 YAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--------DAEAKFKDLAEAWEVLKD   82 (329)
T ss_dssp             ------------------------------------------------------------
T ss_pred             HHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------HHHHHHHHHHHHHHHhhh
Confidence            5667888899999999999999999999998642        377899999999998753

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=97.73  E-value=7.2e-06  Score=78.76  Aligned_cols=42  Identities=17%  Similarity=0.177  Sum_probs=36.6

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -++..+||++||++++.+||||++.          |...|..||+||+|...
T Consensus        29 ~a~~~eIk~aYr~la~~~HPDk~~~----------a~~~f~~i~~AY~vL~d   70 (181)
T 3uo3_A           29 TIDQSRLRKEYRQLQAQHHPDMAQQ----------GSEQSSTLNQAYHTLKD   70 (181)
T ss_dssp             CCCHHHHHHHHHHHHHTCCTTSCCS----------CSSGGGSHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHhCcCCCcc----------HHHHHHHHHHHHHHHcC
Confidence            6788999999999999999999864          44679999999999753

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=97.62  E-value=2.1e-05  Score=75.91  Aligned_cols=47  Identities=17%  Similarity=0.032  Sum_probs=35.9

Q ss_pred             ccccccccC--chhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          669 PVPLVDIIE--GNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       669 pVgmsDLvt--PaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -+|+..-++  ..+||+|||++++.+||||++.           +..|..|++||+|...
T Consensus        16 vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----------~e~F~~I~~AYevLsd   64 (174)
T 2pf4_E           16 LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED   64 (174)
T ss_dssp             TTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----------CTTTTHHHHHHHHHHH
T ss_pred             HcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----------HHHHHHHHHHHHHhCC
Confidence            346666666  5999999999999999999753           1479999999998753

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=97.19  E-value=5.3e-05  Score=83.33  Aligned_cols=53  Identities=17%  Similarity=0.237  Sum_probs=26.3

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +.=+|+..-++..+||+|||++++.+||||++...       -|+..|..|++||+|...
T Consensus        24 y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~-------~~~~~f~~i~~ay~~L~~   76 (780)
T 3apo_A           24 YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-------NAHGDFLKINRAYEVLKD   76 (780)
T ss_dssp             HHHHTCCTTCCHHHHHHHHCC------------------------------CTHHHHHHS
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHHcC
Confidence            56678888999999999999999999999986422       377889999999998753

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=96.72  E-value=0.0018  Score=62.76  Aligned_cols=56  Identities=21%  Similarity=0.260  Sum_probs=46.7

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      ++-+++..-.+..+++++|+++++..|||+.+.    .+.+..|+..|..|++||++...
T Consensus       385 y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~----~~~~~~a~~~~~~i~~ay~~L~d  440 (450)
T 2y4t_A          385 YKILGVKRNAKKQEIIKAYRKLALQWHPDNFQN----EEEKKKAEKKFIDIAAAKEVLSD  440 (450)
T ss_dssp             GGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCS----HHHHHHHHHHHHHHHHHHHHSSG
T ss_pred             HHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHHHHHHHHHHHHhCC
Confidence            566677777788999999999999999999863    34466799999999999999753

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=96.63  E-value=0.002  Score=53.34  Aligned_cols=45  Identities=7%  Similarity=0.052  Sum_probs=33.2

Q ss_pred             cccccc---cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          670 VPLVDI---IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       670 VgmsDL---vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +||.+.   ++..+||++||++....||||..    +.   |    ++..||+|+++..
T Consensus        10 Lgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG----S~---y----l~~ki~~Ake~l~   57 (65)
T 2guz_B           10 LNIEESKGDLNMDKINNRFNYLFEVNDKEKGG----SF---Y----LQSKVYRAAERLK   57 (65)
T ss_dssp             TTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC----CH---H----HHHHHHHHHHHHH
T ss_pred             hCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC----CH---H----HHHHHHHHHHHHH
Confidence            456665   78899999999999999999953    21   3    4455667777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	731
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-17

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.7 bits (186), Expect = 2e-17
 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)

Query: 635 IDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLH 693
             ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +H
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 694 PDK 696
           PDK
Sbjct: 63  PDK 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	731
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.9
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	98.63
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	98.58
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	98.47
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	98.39
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	98.34
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	98.29
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	98.24

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=7.2e-25  Score=190.24  Aligned_cols=90  Identities=33%  Similarity=0.599  Sum_probs=82.8

Q ss_pred             hHHHHHHHHhhcCCCCcHHHHHhcCccccCCC-CCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHH
Q 004773          633 QAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE  711 (731)
Q Consensus       633 d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~-s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe  711 (731)
                      |.|+.+|.+|++|+++|||+||++||.|||++ +.|+.+||.+++++++||+|||++++.+||||++..    .++.+|+
T Consensus         1 d~~~~~i~~W~~~~~~~ir~lL~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~----~~~~~a~   76 (98)
T d1nz6a_           1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQ----PYEQYAK   76 (98)
T ss_dssp             CHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTS----TTHHHHH
T ss_pred             ChHHHHHHHHHhcchhhHHHHHHhhhhhcCCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCCh----HHHHHHH
Confidence            57889999999999999999999999999986 789999999999999999999999999999998752    3456799


Q ss_pred             HHHHHHHHHHhhhhc
Q 004773          712 KVLIFCRRHGLISTH  726 (731)
Q Consensus       712 ~VF~eLNEAYEVf~~  726 (731)
                      .+|..|++||+|+..
T Consensus        77 ~~f~~I~~Ay~~L~d   91 (98)
T d1nz6a_          77 MIFMELNDAWSEFEN   91 (98)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCC
Confidence            999999999999974

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=1.4e-08  Score=86.33  Aligned_cols=59  Identities=19%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +.=++|..-++..+||+||+++++.+||||+... ...+.+..|+.+|..|++||+|...
T Consensus        19 Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~-~~~~~~~~a~~~f~~I~~Ay~vL~d   77 (94)
T d1wjza_          19 YSILGADPSANMSDLKQKYQKLILLYHPDKQSAD-VPAGTMEECMQKFIEIDQAWKILGN   77 (94)
T ss_dssp             HHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTT-CCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHcCCCCCcCHHHHHHHHHHHHHHhhhhhcccc-chHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567888889999999999999999999998753 3466667899999999999999853

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=2.9e-08  Score=80.96  Aligned_cols=52  Identities=17%  Similarity=0.230  Sum_probs=44.7

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +=+||..-++..+||+|||++++.+||||++...       .|+..|..|++||+|...
T Consensus         7 ~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~-------~~~~~f~~i~~Ay~vL~d   58 (75)
T d1xbla_           7 EILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-------EAEAKFKEIKEAYEVLTD   58 (75)
T ss_dssp             TTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTC-------HHHHHHHHHHHHHHHTTS
T ss_pred             HHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCCh-------HHHHHHHHHHHHHHhcCC
Confidence            4568888999999999999999999999987532       367889999999999753

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.4e-08  Score=83.02  Aligned_cols=53  Identities=19%  Similarity=0.092  Sum_probs=45.4

Q ss_pred             ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      |+-+++..-++..+||+|||++++.+||||++..      ...|+.+|..|++||++..
T Consensus        19 y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~   71 (88)
T d1iura_          19 TSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN------HDIANEVFKHLQNEINRLE   71 (88)
T ss_dssp             HHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhccccccch------hhHHHHHHHHHHHHHHHHH
Confidence            5566777789999999999999999999998641      3469999999999999874

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=1.8e-07  Score=75.73  Aligned_cols=50  Identities=16%  Similarity=0.142  Sum_probs=42.7

Q ss_pred             ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      -++..+||++||++++.+||||..+.  +.+.+-+|+..|..||+||+|..+
T Consensus        14 ~~d~~eIk~aYr~l~~~~HPDk~~~~--~~~~~~~a~~~~~~i~~Ay~vL~d   63 (76)
T d1fpoa1          14 QLDTQALSLRFQDLQRQYHPDKFASG--SQAEQLAAVQQSATINQAWQTLRH   63 (76)
T ss_dssp             CCCHHHHHHHHHHHHHHTCGGGGTTS--CHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHhCccccccc--hHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35678999999999999999998753  355566899999999999999864

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=98.34  E-value=5.4e-08  Score=84.43  Aligned_cols=45  Identities=16%  Similarity=0.072  Sum_probs=36.6

Q ss_pred             ccccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          670 VPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       670 VgmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +||..-+  +..+||+||||+++++||||++.     +      ..|..|++||+|..
T Consensus        14 LGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~-----~------e~F~~I~~AY~vLs   60 (114)
T d1gh6a_          14 LGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----E------EKMKKMNTLYKKME   60 (114)
T ss_dssp             TTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----T------TTTHHHHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHhcccchhh-----H------HHHHHHHHHHHHhC
Confidence            4566655  56799999999999999999863     1      35999999999875

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=98.29  E-value=2e-07  Score=77.66  Aligned_cols=45  Identities=18%  Similarity=0.112  Sum_probs=36.6

Q ss_pred             ccccc--ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773          670 VPLVD--IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  725 (731)
Q Consensus       670 VgmsD--LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~  725 (731)
                      +||..  -.+..+||+|||++++.+||||...           +..|..||+||++..
T Consensus        17 Lgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~-----------~e~~~~in~Ay~~L~   63 (79)
T d1fafa_          17 LKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----------HALMQELNSLWGTFK   63 (79)
T ss_dssp             HTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----------HHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC-----------HHHHHHHHHHHHHHC
Confidence            34544  3488999999999999999999641           256999999999975

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=5.1e-07  Score=73.47  Aligned_cols=51  Identities=24%  Similarity=0.315  Sum_probs=43.0

Q ss_pred             cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773          668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  726 (731)
Q Consensus       668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~  726 (731)
                      +=++|..-++..+||+||+++++.+||||.....        +...|..|++||+|.+.
T Consensus         7 ~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~--------~~~~~~~i~~Ay~vLsd   57 (77)
T d1hdja_           7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--------AEEKFKEIAEAYDVLSD   57 (77)
T ss_dssp             HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTT--------HHHHHHHHHHHHHHTTC
T ss_pred             HHcCCCCCcCHHHHHHHHHHHHHHhccccccchh--------HHHHHHHHHHHHHHhcC
Confidence            3457788899999999999999999999986421        56779999999999874