Citrus Sinensis ID: 004946

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720--
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
cccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccEEEEcccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccEEccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHcHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHccccccEEEccccHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccEEEEEEcccEEEEEccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHcccccccccEEEccccccccccccHHHHHHHccccHHHHHHHHHHHHcccHHHHcccc
cccccccccccccEEEEEcccccccccccccccccccccHHHHHccccccccccccccEEEEEccccccccccccccccccHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEHHHHHHccccccEEEEEccccccccHHccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHcccEEEcccccccHHHHHHHHHHHHcccccccEEEEEEEccccccccHccccccccccccccccHccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEHEHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccccEEEEccccccccEEccccccccEEEccccEEEEcccEEEEEEccHHHHHHHHHHHHHHHccccEEEEEcEEcccccHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccccccEEEEccccccEcccccHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHc
mvtpsakyplelpltahchgtldqRKIEFLSSNISRELEIsrinlcpssssitssklVTVSRicalpdiddffwdkeptpildlvenplrlkSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHvfhapvdkilwdvgeQTYAHKILTGRRSLIHTLRkkdgisgytsrseseydpfnaghgcnsvsAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMsnagyldsnmIVILNdsrhslhpkieespktSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYargmigpqgstLFEELGlyyigpvdghNIEDLISVLQEVASLGSMGPVLVHVVTEenrraedtqKSEAIEKQqegasdsnslpfgnysrtydDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSaglacgglkpfciipsAFLQRAYDQVVndvdqqrlpVRFVITsaglvgsdgptqcgafditfmsclpnmivmapsdedELVDMVATVasiddrpvcfryprgaivrtdlpgyrgipieeigkgkvlvegkdvaLLGYGAMVQNCLKARALLSKLGIdvtvadarfckpLDIKLVRELCQNHTFLITVeegsiggfgshVSHFIALDglldsgvkwrpivlpdnyiehaspTQQLALAGLTGHHIAATALSLLGRTREALLLMC
mvtpsakyplelpltahchgtlDQRKIEFLSSNISRELEisrinlcpssssitssklvTVSRICALPDIDDFFWDKEPTPILdlvenplrlksLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKiltgrrslihtlrkkdgisgytsRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTlsriqssksfrQLREVAKGMtkrigrgmHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEenrraedtqkseaiekqqegasdsnslpfgNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITsaglvgsdgpTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATvasiddrpvcfryprgaivrtdlpgyrgipieeigkgkvlvEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPssssitssklvtvsRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
*********LELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIV********SSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGIS************FNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN*********************************************KRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT*****************************FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL**
********PLELPLTAHCHGTLDQRKIEFLSSNISRELEI*********************************WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQ*******************DCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSI**********SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE***********************NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
****SAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPS********LVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query722 2.2.26 [Sep-21-2011]
Q38854717 1-deoxy-D-xylulose-5-phos no no 0.922 0.928 0.593 0.0
O78328719 Probable 1-deoxy-D-xylulo N/A no 0.897 0.901 0.609 0.0
O22567720 1-deoxy-D-xylulose-5-phos no no 0.894 0.897 0.603 0.0
Q6YU51713 Probable 1-deoxy-D-xylulo no no 0.894 0.906 0.576 0.0
B6IRB5642 1-deoxy-D-xylulose-5-phos yes no 0.855 0.962 0.496 1e-174
Q985Y3637 1-deoxy-D-xylulose-5-phos yes no 0.862 0.978 0.503 1e-173
Q11KE0650 1-deoxy-D-xylulose-5-phos yes no 0.860 0.955 0.482 1e-172
B0CKC0643 1-deoxy-D-xylulose-5-phos yes no 0.855 0.961 0.497 1e-172
Q89RW1661 1-deoxy-D-xylulose-5-phos yes no 0.858 0.937 0.480 1e-171
A6WWC4638 1-deoxy-D-xylulose-5-phos yes no 0.855 0.968 0.497 1e-171
>sp|Q38854|DXS_ARATH 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2 Back     alignment and function desciption
 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/684 (59%), Positives = 513/684 (75%), Gaps = 18/684 (2%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 43  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 98

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 99  DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 158

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +
Sbjct: 159 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGD 218

Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
           G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LSR+QS+ 
Sbjct: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 278

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
           + R+LREVAKGMTK+IG  MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+
Sbjct: 279 ALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNID 338

Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
           DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     +       
Sbjct: 339 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 394

Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
            N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAV
Sbjct: 395 TNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 454

Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
           TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGA
Sbjct: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 514

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
           FD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+P
Sbjct: 515 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 574

Query: 576 IEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRE 635
           I EIGKG++L EG+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R 
Sbjct: 575 I-EIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRS 633

Query: 636 LCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLAL 695
           L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA 
Sbjct: 634 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAE 693

Query: 696 AGLTGHHIAATALSLLGRTREALL 719
           AGL   HIAATAL+L+G  REAL 
Sbjct: 694 AGLMPSHIAATALNLIGAPREALF 717
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 7
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1 Back     alignment and function description
>sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2 Back     alignment and function description
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2 SV=1 Back     alignment and function description
>sp|B6IRB5|DXS_RHOCS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q985Y3|DXS_RHILO 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti (strain MAFF303099) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q11KE0|DXS_MESSB 1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|B0CKC0|DXS_BRUSI 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q89RW1|DXS_BRAJA 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum (strain USDA 110) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|A6WWC4|DXS_OCHA4 1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query722
255546609717 1-deoxyxylulose-5-phosphate synthase, pu 0.993 1.0 0.775 0.0
224089136657 predicted protein [Populus trichocarpa] 0.905 0.995 0.812 0.0
449441938717 PREDICTED: 1-deoxy-D-xylulose-5-phosphat 0.991 0.998 0.735 0.0
359476100719 PREDICTED: probable 1-deoxy-D-xylulose-5 0.991 0.995 0.737 0.0
357466311708 hypothetical protein MTR_3g107740 [Medic 0.977 0.997 0.725 0.0
356518258716 PREDICTED: probable 1-deoxy-D-xylulose-5 0.980 0.988 0.719 0.0
356509936716 PREDICTED: probable 1-deoxy-D-xylulose-5 0.979 0.987 0.717 0.0
408537469712 1-deoxy-D-xylulose-5-phosphate synthase 0.977 0.991 0.713 0.0
224141855612 predicted protein [Populus trichocarpa] 0.839 0.990 0.804 0.0
15239030700 1-deoxy-D-xylulose 5-phosphate synthase 0.963 0.994 0.692 0.0
>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1166 bits (3016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/722 (77%), Positives = 635/722 (87%), Gaps = 5/722 (0%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
           M T S +YP    +TAH        K++ LSS+   ++  S +NL   S+SIT+SK   V
Sbjct: 1   MGTASTQYPY--GITAHSFAKFGH-KLDTLSSSFPNKVGFSSVNLYQGSASITNSKGF-V 56

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            RIC++PD+DD FW+K PTPILD+VENP+ L +LT++ELK+LA EIR ELSSI+S+T+K+
Sbjct: 57  GRICSVPDLDDIFWEKVPTPILDVVENPIHLNNLTLQELKELADEIREELSSIMSRTQKA 116

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
            K+SLA VELTVA+HHVFHAPVDKILWDVGEQTYAHKILTGRRSL+HTLR+K+G+SG+TS
Sbjct: 117 FKASLAVVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTS 176

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           +SESEYDPF AGHGCNSVSAGLGMAVARD+KGKRE +VTVISNGTTMAGQ YEAMSNAGY
Sbjct: 177 QSESEYDPFGAGHGCNSVSAGLGMAVARDMKGKRERVVTVISNGTTMAGQVYEAMSNAGY 236

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           +DSNMIVILNDSRHSLHPKIEE PKTS+NALSSTLSR+QSSKSFR+ RE AKG+TKRIGR
Sbjct: 237 IDSNMIVILNDSRHSLHPKIEEGPKTSLNALSSTLSRLQSSKSFRKFREAAKGVTKRIGR 296

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GMHE AAKVDEYARGMIGP GSTLFEELGLYYIGPVDGHNIEDL+ VLQEVASL SMGPV
Sbjct: 297 GMHELAAKVDEYARGMIGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQEVASLDSMGPV 356

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           L+HVVTEENRR ++ QK + +E  QEG+S+S+   +  ++RTY DCF+EAL+MEAEKDKD
Sbjct: 357 LIHVVTEENRRRDNKQKIDTLENLQEGSSNSDPFLYSIHTRTYSDCFVEALIMEAEKDKD 416

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV+VHAGMEM+ + QL QE++P+R+FDVGMAEQHAVTFSAGL+CGGLKPFCIIPS FLQR
Sbjct: 417 IVIVHAGMEMETAFQLIQERYPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSTFLQR 476

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQVV+DVDQQR+PVRFVITSAGLVGSDGP QCGAFDITFMSCLPNMIVMAPSDEDELV
Sbjct: 477 AYDQVVHDVDQQRIPVRFVITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDELV 536

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMV 600
           DMVAT   IDD PVCFRYPRGAIV TD     GIPI EIGKGKVL+EGKDVALLGYGAMV
Sbjct: 537 DMVATAVQIDDHPVCFRYPRGAIVGTDHYMRIGIPI-EIGKGKVLIEGKDVALLGYGAMV 595

Query: 601 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 660
           QNCLKAR LLSKLGI+VTVADARFCKPLD+KL+R+LC+NH FL+TVEEGS+GGFGSHV+ 
Sbjct: 596 QNCLKARHLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSVGGFGSHVAQ 655

Query: 661 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 720
           F++LDG LD  VKWRPIVLPD YIEHA P +QL LAGLTGHHIAAT L LLGRTREALLL
Sbjct: 656 FLSLDGQLDGKVKWRPIVLPDTYIEHALPKEQLNLAGLTGHHIAATVLRLLGRTREALLL 715

Query: 721 MC 722
           MC
Sbjct: 716 MC 717

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa] gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Cucumis sativus] gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Vitis vinifera] gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula] gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis] Back     alignment and taxonomy information
>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa] gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana] gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis thaliana] gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query722
TAIR|locus:2130374717 CLA1 "CLOROPLASTOS ALTERADOS 1 0.903 0.909 0.605 1.2e-209
TAIR|locus:2089885641 DXPS1 "1-deoxy-D-xylulose 5-ph 0.495 0.558 0.604 9.4e-176
TIGR_CMR|SPO_0247642 SPO_0247 "1-deoxy-D-xylulose-5 0.860 0.967 0.481 5.1e-145
TAIR|locus:2148047700 DXPS3 "1-deoxy-D-xylulose 5-ph 0.602 0.621 0.639 4e-138
TIGR_CMR|DET_0745647 DET_0745 "1-deoxy-D-xylulose-5 0.854 0.953 0.411 8.8e-118
TIGR_CMR|GSU_0686637 GSU_0686 "deoxyxylulose-5-phos 0.847 0.960 0.405 5e-115
TIGR_CMR|CHY_1985622 CHY_1985 "1-deoxy-D-xylulose-5 0.826 0.959 0.401 1.7e-114
TIGR_CMR|SO_1525622 SO_1525 "deoxyxylulose-5-phosp 0.807 0.937 0.404 2.6e-111
UNIPROTKB|P77488620 dxs "Dxs" [Escherichia coli K- 0.818 0.953 0.405 2.1e-109
TIGR_CMR|GSU_1764626 GSU_1764 "deoxyxylulose-5-phos 0.850 0.980 0.409 2.4e-108
TAIR|locus:2130374 CLA1 "CLOROPLASTOS ALTERADOS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2027 (718.6 bits), Expect = 1.2e-209, P = 1.2e-209
 Identities = 403/666 (60%), Positives = 502/666 (75%)

Query:    62 RICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
             ++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+ E+RS++   VSKT   
Sbjct:    56 KVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGH 115

Query:   121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
             L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T 
Sbjct:   116 LGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTK 175

Query:   181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
             R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +G   AGQAYEAM+NAGY
Sbjct:   176 RGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGY 235

Query:   241 LDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
             LDS+MIVILND++  SL     + P   + ALSS LSR+QS+ + R+LREVAKGMTK+IG
Sbjct:   236 LDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIG 295

Query:   300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
               MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DL+++L+EV S  + GP
Sbjct:   296 GPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGP 355

Query:   360 VLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVM 413
             VL+HVVTE+ R      RA+D  K   + K              N +++Y   F EALV 
Sbjct:   356 VLIHVVTEKGRGYPYAERADD--KYHGVVKFDPATG--RQFKTTNKTQSYTTYFAEALVA 411

Query:   414 EAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII 473
             EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I
Sbjct:   412 EAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 471

Query:   474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAP 533
              S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNMIVMAP
Sbjct:   472 YSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAP 531

Query:   534 SDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEEIGKGKVLVEGKDVA 592
             SDE +L +MVAT  +IDDRP CFRYPRG  +   LP G +G+PIE IGKG++L EG+ VA
Sbjct:   532 SDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIE-IGKGRILKEGERVA 590

Query:   593 LLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIG 652
             LLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L ++H  LITVEEGSIG
Sbjct:   591 LLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIG 650

Query:   653 GFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
             GFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA AGL   HIAATAL+L+G
Sbjct:   651 GFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIG 710

Query:   713 RTREAL 718
               REAL
Sbjct:   711 APREAL 716
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=IEA;IDA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016114 "terpenoid biosynthetic process" evidence=IEA
GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA;TAS
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009965 "leaf morphogenesis" evidence=RCA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030154 "cell differentiation" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
TAIR|locus:2089885 DXPS1 "1-deoxy-D-xylulose 5-phosphate synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0247 SPO_0247 "1-deoxy-D-xylulose-5-phosphate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2148047 DXPS3 "1-deoxy-D-xylulose 5-phosphate synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0745 DET_0745 "1-deoxy-D-xylulose-5-phosphate synthase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0686 GSU_0686 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1985 CHY_1985 "1-deoxy-D-xylulose-5-phosphate synthase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1525 SO_1525 "deoxyxylulose-5-phosphate synthase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P77488 dxs "Dxs" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1764 GSU_1764 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A9IQP2DXS_BART12, ., 2, ., 1, ., 70.48450.85040.9669yesno
A5V6A9DXS_SPHWW2, ., 2, ., 1, ., 70.47910.86980.9827yesno
A5VP09DXS_BRUO22, ., 2, ., 1, ., 70.49760.85590.9611yesno
Q6G0D4DXS_BARQU2, ., 2, ., 1, ., 70.49220.85590.9656yesno
B0CKC0DXS_BRUSI2, ., 2, ., 1, ., 70.49760.85590.9611yesno
Q57ET1DXS_BRUAB2, ., 2, ., 1, ., 70.49600.85590.9611yesno
Q8UHD7DXS_AGRT52, ., 2, ., 1, ., 70.46710.85730.9687yesno
A9M8W0DXS_BRUC22, ., 2, ., 1, ., 70.49760.85590.9611yesno
Q11KE0DXS_MESSB2, ., 2, ., 1, ., 70.48290.86010.9553yesno
Q5FUB1DXS_GLUOX2, ., 2, ., 1, ., 70.46550.85590.9363yesno
A7IPK6DXS_XANP22, ., 2, ., 1, ., 70.48380.86560.9720yesno
Q2RYD6DXS1_RHORT2, ., 2, ., 1, ., 70.47640.85730.9596yesno
Q8G292DXS_BRUSU2, ., 2, ., 1, ., 70.49760.85590.9611yesno
A1URW6DXS_BARBK2, ., 2, ., 1, ., 70.48070.85870.9717yesno
B2IDK3DXS_BEII92, ., 2, ., 1, ., 70.47980.86560.9735yesno
Q21A74DXS_RHOPB2, ., 2, ., 1, ., 70.48350.86010.9687yesno
Q28WA7DXS1_JANSC2, ., 2, ., 1, ., 70.46100.86560.9780yesno
Q1QQ40DXS_NITHX2, ., 2, ., 1, ., 70.46490.87530.9461yesno
Q92RJ1DXS_RHIME2, ., 2, ., 1, ., 70.46400.85730.9596yesno
A8IBS1DXS_AZOC52, ., 2, ., 1, ., 70.48120.85180.9594yesno
Q1MKN4DXS_RHIL32, ., 2, ., 1, ., 70.47580.85590.9686yesno
A5EEQ0DXS_BRASB2, ., 2, ., 1, ., 70.46730.86420.9734yesno
Q5NN52DXS1_ZYMMO2, ., 2, ., 1, ., 70.46900.86840.9661yesno
B2S9T6DXS_BRUA12, ., 2, ., 1, ., 70.49600.85590.9611yesno
Q2IRL7DXS_RHOP22, ., 2, ., 1, ., 70.47740.86560.9796yesno
Q2RR29DXS2_RHORT2, ., 2, ., 1, ., 70.47640.85730.9596yesno
Q0ARE5DXS_MARMM2, ., 2, ., 1, ., 70.47260.85310.9580yesno
Q07SR3DXS_RHOP52, ., 2, ., 1, ., 70.47440.85450.9640yesno
Q16CP0DXS2_ROSDO2, ., 2, ., 1, ., 70.46620.85450.9610yesno
Q985Y3DXS_RHILO2, ., 2, ., 1, ., 70.50310.86280.9780yesno
Q5NM38DXS2_ZYMMO2, ., 2, ., 1, ., 70.46740.86840.9646yesno
A4YQ36DXS_BRASO2, ., 2, ., 1, ., 70.47200.86420.9734yesno
Q3J1A8DXS1_RHOS42, ., 2, ., 1, ., 70.45900.85310.9506yesno
Q2YMF0DXS_BRUA22, ., 2, ., 1, ., 70.49600.85590.9611yesno
Q2W367DXS_MAGSA2, ., 2, ., 1, ., 70.48290.86560.9704yesno
Q8YFM2DXS_BRUME2, ., 2, ., 1, ., 70.49760.85590.9611yesno
Q5LX42DXS_RUEPO2, ., 2, ., 1, ., 70.47630.85870.9657yesno
B3QFY7DXS_RHOPT2, ., 2, ., 1, ., 70.48510.86010.9687yesno
B6IRB5DXS_RHOCS2, ., 2, ., 1, ., 70.49680.85590.9626yesno
Q6NB76DXS_RHOPA2, ., 2, ., 1, ., 70.48510.86010.9687yesno
Q3SUZ1DXS_NITWN2, ., 2, ., 1, ., 70.46500.87950.9534yesno
Q130G7DXS_RHOPS2, ., 2, ., 1, ., 70.48360.86560.9796yesno
C0RHE3DXS_BRUMB2, ., 2, ., 1, ., 70.49760.85590.9611yesno
Q6G4D1DXS_BARHE2, ., 2, ., 1, ., 70.48600.85040.9593yesno
A6WWC4DXS_OCHA42, ., 2, ., 1, ., 70.49760.85590.9686yesno
Q89RW1DXS_BRAJA2, ., 2, ., 1, ., 70.48040.85870.9379yesno
O78328DXS_CAPAN2, ., 2, ., 1, ., 70.60950.89750.9012N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.2.10.921
4th Layer2.2.1.70.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.VI.2744.1
hypothetical protein (657 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_XV1514
1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC-1.1.1.267) (471 aa)
  •  •• 0.972
DXR
SubName- Full=Putative chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase; EC=1.1.1.26 [...] (471 aa)
  •  •• 0.972
CMS
SubName- Full=Putative chloroplast 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC [...] (230 aa)
  •   • 0.725
gw1.I.8813.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC-4.6.1.12) (187 aa)
  •   • 0.632
MCS
SubName- Full=Putative chloroplast 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; EC=4. [...] (195 aa)
  •   • 0.622
eugene3.00141227
hypothetical protein (256 aa)
•       0.521
gw1.I.9714.1
hypothetical protein (334 aa)
  •   • 0.520
CMK
SubName- Full=Putative chloroplast 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; EC [...] (336 aa)
  •   • 0.516
eugene3.191750001
Predicted protein (208 aa)
• •   • 0.512
eugene3.51240001
annotation not avaliable (258 aa)
      • 0.484

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query722
PLN02225701 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate 0.0
PLN02582677 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK05444580 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate 0.0
COG1154627 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [ 0.0
PLN02234641 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK12571641 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate 0.0
TIGR00204617 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn 0.0
pfam13292272 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-ph 1e-124
PRK12315581 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate 1e-117
cd02007195 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam 2e-74
COG3958312 COG3958, COG3958, Transketolase, C-terminal subuni 4e-61
cd07033156 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin 1e-59
pfam02779172 pfam02779, Transket_pyr, Transketolase, pyrimidine 4e-38
smart00861136 smart00861, Transket_pyr, Transketolase, pyrimidin 2e-37
pfam02780124 pfam02780, Transketolase_C, Transketolase, C-termi 5e-35
PRK05899586 PRK05899, PRK05899, transketolase; Reviewed 4e-27
PTZ00182355 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydro 1e-26
COG0022324 COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogena 1e-19
cd02007195 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam 5e-18
cd06586154 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding 1e-16
PRK09212327 PRK09212, PRK09212, pyruvate dehydrogenase subunit 4e-16
COG0021663 COG0021, TktA, Transketolase [Carbohydrate transpo 1e-13
PLN02683356 PLN02683, PLN02683, pyruvate dehydrogenase E1 comp 2e-13
PRK11892464 PRK11892, PRK11892, pyruvate dehydrogenase subunit 4e-11
cd07036167 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PY 6e-08
PLN02790654 PLN02790, PLN02790, transketolase 5e-07
PTZ00089661 PTZ00089, PTZ00089, transketolase; Provisional 5e-07
CHL00144327 CHL00144, odpB, pyruvate dehydrogenase E1 componen 2e-05
TIGR00232653 TIGR00232, tktlase_bact, transketolase, bacterial 5e-05
>gnl|CDD|177870 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information 
 Score =  984 bits (2544), Expect = 0.0
 Identities = 493/686 (71%), Positives = 568/686 (82%), Gaps = 22/686 (3%)

Query: 37  ELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTI 96
           ++ I  +   PSS+    S    V   C+LP+ D++  +K  TPILD +E PL+LK+L++
Sbjct: 36  DVSIKSLFSAPSSTHKECSNRARVC--CSLPNTDEYCDEKFETPILDSIETPLQLKNLSV 93

Query: 97  KELKQLAVEIRSELSSIV-SKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           KELK LA EIR+EL S++  KT+KS+  S AA+ELT+ALH+VF APVD ILWD  EQTYA
Sbjct: 94  KELKLLADEIRTELHSVLWKKTQKSMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYA 153

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HK+LT R S I + R+K+GISG TS+ ESEYD F  GHGCNS+SAGLG+AVARDIKGKR+
Sbjct: 154 HKVLTRRWSAIPS-RQKNGISGVTSQLESEYDSFGTGHGCNSISAGLGLAVARDIKGKRD 212

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            +V VI N T  AGQAYEAMSNAGYLDSNMIVILNDSRHSLHP +EE  K SI+ALSS +
Sbjct: 213 RVVAVIDNATITAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIM 272

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           S+IQSSK FR+ RE+AK MTKRIG+GM+EWAAKVDEYARGM+GP GSTLFEELGLYYIGP
Sbjct: 273 SKIQSSKIFRKFRELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGP 332

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLP 395
           VDGHNIEDL+ VL+EV+SL SMGPVLVHV+TEENR AE T K+  ++ +           
Sbjct: 333 VDGHNIEDLVCVLREVSSLDSMGPVLVHVITEENRDAE-TGKNIMVKDR----------- 380

Query: 396 FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHA 455
                RTY DCF+EALVMEAEKD+DIVVVHAGMEMD SL  FQE+FP+R+F+VGMAEQHA
Sbjct: 381 -----RTYSDCFVEALVMEAEKDRDIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHA 435

Query: 456 VTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCG 515
           VTFSAGL+ GGLKPFCIIPSAFLQRAYDQVV+DVD+QR  VRFVITSAGLVGSDGP QCG
Sbjct: 436 VTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCG 495

Query: 516 AFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIP 575
           AFDI FMS LPNMI MAP+DEDELV+MVAT A + DRPVCFR+PRG+IV  +     G+P
Sbjct: 496 AFDIAFMSSLPNMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLP 555

Query: 576 IEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRE 635
           I EIG+G+VLVEG+DVALLGYGAMVQNCL A +LLSKLG++VTVADARFCKPLDIKLVR+
Sbjct: 556 I-EIGRGRVLVEGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRD 614

Query: 636 LCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLAL 695
           LCQNH FLITVEEG +GGFGSHV+ FIALDG LD  +KWRPIVLPD YIE ASP +QLAL
Sbjct: 615 LCQNHKFLITVEEGCVGGFGSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLAL 674

Query: 696 AGLTGHHIAATALSLLGRTREALLLM 721
           AGLTGHHIAATALSLLGRTREALLLM
Sbjct: 675 AGLTGHHIAATALSLLGRTREALLLM 700

Length = 701
>gnl|CDD|178194 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>gnl|CDD|177878 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|222031 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|237053 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>gnl|CDD|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>gnl|CDD|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|217227 pfam02780, Transketolase_C, Transketolase, C-terminal domain Back     alignment and domain information
>gnl|CDD|235639 PRK05899, PRK05899, transketolase; Reviewed Back     alignment and domain information
>gnl|CDD|185502 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223101 COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>gnl|CDD|132915 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|169719 PRK09212, PRK09212, pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>gnl|CDD|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215368 PLN02683, PLN02683, pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>gnl|CDD|237011 PRK11892, PRK11892, pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|132919 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>gnl|CDD|215424 PLN02790, PLN02790, transketolase Back     alignment and domain information
>gnl|CDD|173383 PTZ00089, PTZ00089, transketolase; Provisional Back     alignment and domain information
>gnl|CDD|177066 CHL00144, odpB, pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>gnl|CDD|232887 TIGR00232, tktlase_bact, transketolase, bacterial and yeast Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 722
COG1154627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 100.0
PLN02225701 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02582677 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02234641 1-deoxy-D-xylulose-5-phosphate synthase 100.0
TIGR00204617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 100.0
PRK12571641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK12315581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
KOG0523632 consensus Transketolase [Carbohydrate transport an 100.0
PTZ00089661 transketolase; Provisional 100.0
PLN02790654 transketolase 100.0
PRK12753663 transketolase; Reviewed 100.0
PRK05899624 transketolase; Reviewed 100.0
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 100.0
PRK12754663 transketolase; Reviewed 100.0
TIGR03186889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 100.0
PRK09405891 aceE pyruvate dehydrogenase subunit E1; Reviewed 100.0
COG0021663 TktA Transketolase [Carbohydrate transport and met 100.0
PRK13012896 2-oxoacid dehydrogenase subunit E1; Provisional 100.0
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 100.0
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 100.0
CHL00144327 odpB pyruvate dehydrogenase E1 component beta subu 100.0
PRK09212327 pyruvate dehydrogenase subunit beta; Validated 100.0
PLN02683356 pyruvate dehydrogenase E1 component subunit beta 100.0
TIGR00759885 aceE pyruvate dehydrogenase E1 component, homodime 100.0
PRK11892464 pyruvate dehydrogenase subunit beta; Provisional 100.0
PTZ00182355 3-methyl-2-oxobutanate dehydrogenase; Provisional 100.0
COG0022324 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
PRK05261785 putative phosphoketolase; Provisional 100.0
KOG0524359 consensus Pyruvate dehydrogenase E1, beta subunit 100.0
PRK09404924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 100.0
COG2609887 AceE Pyruvate dehydrogenase complex, dehydrogenase 100.0
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 100.0
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 100.0
TIGR00239929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 100.0
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 100.0
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 100.0
KOG0525362 consensus Branched chain alpha-keto acid dehydroge 100.0
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 100.0
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 100.0
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 100.0
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 99.97
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 99.96
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 99.93
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 99.92
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 99.91
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 99.9
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 99.9
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 99.89
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 99.88
TIGR03336 595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 99.88
PRK07119352 2-ketoisovalerate ferredoxin reductase; Validated 99.88
PF02780124 Transketolase_C: Transketolase, C-terminal domain; 99.88
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 99.87
PRK08659376 2-oxoglutarate ferredoxin oxidoreductase subunit a 99.85
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 99.84
PRK09622407 porA pyruvate flavodoxin oxidoreductase subunit al 99.83
COG3957793 Phosphoketolase [Carbohydrate transport and metabo 99.83
PRK09627375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 99.83
PRK08366390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 99.8
PRK08367394 porA pyruvate ferredoxin oxidoreductase subunit al 99.78
TIGR03710562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 99.77
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 99.72
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 99.68
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.64
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 99.62
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 99.62
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 99.61
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 99.6
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 99.6
PRK06163202 hypothetical protein; Provisional 99.59
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 99.59
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 99.58
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 99.57
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.56
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 99.55
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 99.55
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 99.55
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 99.54
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.53
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 99.52
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 99.48
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 99.48
COG4231 640 Indolepyruvate ferredoxin oxidoreductase, alpha an 99.47
PRK122701228 kgd alpha-ketoglutarate decarboxylase; Reviewed 99.47
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 99.46
PRK06457549 pyruvate dehydrogenase; Provisional 99.45
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 99.44
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 99.44
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 99.43
PRK06154565 hypothetical protein; Provisional 99.43
PRK05858542 hypothetical protein; Provisional 99.42
PRK09124574 pyruvate dehydrogenase; Provisional 99.42
PRK08322547 acetolactate synthase; Reviewed 99.42
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 99.42
COG0674365 PorA Pyruvate:ferredoxin oxidoreductase and relate 99.42
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 99.42
PRK06546578 pyruvate dehydrogenase; Provisional 99.41
PRK08611576 pyruvate oxidase; Provisional 99.41
PRK06112578 acetolactate synthase catalytic subunit; Validated 99.41
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 99.41
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 99.41
PRK12474518 hypothetical protein; Provisional 99.39
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 99.39
PRK08273597 thiamine pyrophosphate protein; Provisional 99.39
PRK07586514 hypothetical protein; Validated 99.39
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 99.39
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 99.39
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 99.38
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 99.38
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 99.37
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 99.37
PRK11269591 glyoxylate carboligase; Provisional 99.37
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 99.37
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 99.37
PRK08617552 acetolactate synthase; Reviewed 99.36
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 99.36
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 99.36
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 99.36
PRK07064544 hypothetical protein; Provisional 99.35
PLN02470585 acetolactate synthase 99.35
PRK08199557 thiamine pyrophosphate protein; Validated 99.35
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 99.35
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 99.35
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 99.35
CHL00099585 ilvB acetohydroxyacid synthase large subunit 99.34
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 99.34
PRK08155564 acetolactate synthase catalytic subunit; Validated 99.34
PRK07524535 hypothetical protein; Provisional 99.33
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 99.33
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 99.32
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 99.32
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 99.31
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.31
PRK08266542 hypothetical protein; Provisional 99.31
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 99.3
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 99.29
PRK07092530 benzoylformate decarboxylase; Reviewed 99.29
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 99.28
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 99.27
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 99.27
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.25
PLN02573578 pyruvate decarboxylase 99.24
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.23
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 99.23
PF09364379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 99.19
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 99.19
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 99.18
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 99.17
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.15
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 99.14
PRK08327569 acetolactate synthase catalytic subunit; Validated 99.14
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 99.11
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 99.09
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.08
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 99.03
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 99.02
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 99.02
KOG0451913 consensus Predicted 2-oxoglutarate dehydrogenase, 98.9
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 98.88
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 98.82
COG3962617 Acetolactate synthase [Amino acid transport and me 98.8
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 98.57
COG0567906 SucA 2-oxoglutarate dehydrogenase complex, dehydro 98.48
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 98.45
KOG04501017 consensus 2-oxoglutarate dehydrogenase, E1 subunit 98.42
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 98.24
PF03894179 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate 98.18
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 98.01
KOG0523632 consensus Transketolase [Carbohydrate transport an 98.0
COG3960592 Glyoxylate carboligase [General function predictio 97.96
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 97.75
COG1165566 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car 97.66
cd03377365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 97.59
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 97.48
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 97.4
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 97.11
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 97.01
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 96.71
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 96.58
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 96.55
TIGR021761165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 96.51
COG4032172 Predicted thiamine-pyrophosphate-binding protein [ 95.56
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 95.54
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 95.19
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 94.77
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 94.76
PRK12474 518 hypothetical protein; Provisional 94.26
TIGR03457 579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 93.99
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 93.79
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 93.72
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 93.72
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 93.69
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 93.64
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 93.5
PRK05858 542 hypothetical protein; Provisional 93.45
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 93.44
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 93.44
COG0028 550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 93.38
PRK08611 576 pyruvate oxidase; Provisional 93.36
PRK08266 542 hypothetical protein; Provisional 93.24
PRK07586 514 hypothetical protein; Validated 93.23
PRK07064 544 hypothetical protein; Provisional 93.21
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 93.2
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 93.16
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 93.15
PRK08155 564 acetolactate synthase catalytic subunit; Validated 93.04
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 93.02
PRK07092 530 benzoylformate decarboxylase; Reviewed 92.94
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 92.93
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 92.88
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 92.83
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 92.8
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 92.76
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 92.59
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 92.58
PRK08322 547 acetolactate synthase; Reviewed 92.57
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 92.55
PRK08199 557 thiamine pyrophosphate protein; Validated 92.47
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 92.41
PRK07524 535 hypothetical protein; Provisional 92.27
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 92.26
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 92.14
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 92.11
PRK06882 574 acetolactate synthase 3 catalytic subunit; Validat 92.11
PRK06457 549 pyruvate dehydrogenase; Provisional 92.07
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 92.02
PRK08617 552 acetolactate synthase; Reviewed 91.7
PRK11269 591 glyoxylate carboligase; Provisional 91.69
PRK06725 570 acetolactate synthase 3 catalytic subunit; Validat 91.63
PRK06163202 hypothetical protein; Provisional 91.53
PLN02573 578 pyruvate decarboxylase 91.52
PRK09124 574 pyruvate dehydrogenase; Provisional 91.46
PRK08979 572 acetolactate synthase 3 catalytic subunit; Validat 91.3
TIGR01504 588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 91.13
TIGR02720 575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 91.1
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 90.99
PRK06112 578 acetolactate synthase catalytic subunit; Validated 90.86
PLN02470 585 acetolactate synthase 90.75
PRK08273 597 thiamine pyrophosphate protein; Provisional 90.71
PF09363203 XFP_C: XFP C-terminal domain; InterPro: IPR018969 90.7
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 90.63
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 90.47
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 90.46
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 90.43
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 90.41
PRK06048 561 acetolactate synthase 3 catalytic subunit; Reviewe 90.27
PRK06546 578 pyruvate dehydrogenase; Provisional 90.0
TIGR03254 554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 89.81
PRK07418 616 acetolactate synthase 3 catalytic subunit; Reviewe 89.47
cd01460266 vWA_midasin VWA_Midasin: Midasin is a member of th 89.4
PRK07449 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 88.74
CHL00099 585 ilvB acetohydroxyacid synthase large subunit 88.64
TIGR03394 535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 88.45
TIGR00173 432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 88.19
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 87.25
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 86.89
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 86.79
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 86.61
PRK08327 569 acetolactate synthase catalytic subunit; Validated 86.48
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 86.15
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 86.06
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 85.97
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 85.84
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 85.68
PRK09259 569 putative oxalyl-CoA decarboxylase; Validated 85.29
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 84.61
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 84.11
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 83.88
PRK06154565 hypothetical protein; Provisional 83.22
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 81.69
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 81.65
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 80.78
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 80.76
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.7e-157  Score=1284.67  Aligned_cols=617  Identities=47%  Similarity=0.754  Sum_probs=591.4

Q ss_pred             CccccCCCCchhccCCCHHHHHHHHHHHHHHHHHhHhcCCCCCCCcchHHHHHHHHhhccCCCCcEEEecCCchHHHHHH
Q 004946           79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKI  158 (722)
Q Consensus        79 ~~~l~~i~~p~~~~~l~~~~l~~la~eiR~~ii~~~~~~gGh~~~slg~vel~~aL~~vf~~p~D~iv~d~GH~~y~h~~  158 (722)
                      +|+|++|++|+|||+|+.+||++||+|||++|++.++++|||++|+||+||||+|||||||+|.|+||||||||+|+|||
T Consensus         2 ~~~L~~i~~P~dLk~ls~~eL~~La~EiR~~li~~vS~~GGHlgsnLGvVELTiALH~VF~sP~D~~IwDVgHQaYpHKi   81 (627)
T COG1154           2 YPLLDKINSPADLKKLSIEELPQLADEIREFLLEVVSATGGHLGSNLGVVELTIALHYVFDSPKDKLIWDVGHQAYPHKI   81 (627)
T ss_pred             cchhhhcCCHHHHhhCCHHHHHHHHHHHHHHHHHHhccCCCccCCCcChhhhhHHHHHHhCCCCCCeEEecCcccchhHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCchhhhhHHHhhCCCCCCCCCCCCCCCCcCcCCCcchHHHHHHHHHHHHHcCCCCeEEEEecCCCcccchHHHHHHHh
Q 004946          159 LTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNA  238 (722)
Q Consensus       159 ltGr~~~~~~~r~~ggl~g~~~~~es~~d~~~~G~~G~~ls~A~G~A~A~~l~~~~~~Vv~viGDGa~~~G~~~EAln~A  238 (722)
                      ||||+++|.++||++|++|||+|.||+||.|++||+||+||+|+|||+|++++|++++||||||||+++.||+|||||+|
T Consensus        82 LTGR~e~f~tlRq~~GlsGf~~r~ESe~D~f~~GHsSTSiSaalG~A~A~~~~g~~~~vvaVIGDGAlt~GmA~EALN~a  161 (627)
T COG1154          82 LTGRREQFDTLRQKDGLSGFPKREESEHDWFGVGHSSTSISAALGMAKARDLKGEDRNVVAVIGDGALTGGMAFEALNNA  161 (627)
T ss_pred             hcCchhhcchhhhcCCCCCCCCcccCCCcccccCchHHHHHHHhhHHHHHHhcCCCCcEEEEECCccccchHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-hcCCCEEEEEECCCCCCCCCccCCCCcchhhhhhhhhhhhhhhHHHHHHHHHhhhhhhcCccHHHHHHHHHHHhhccc
Q 004946          239 G-YLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI  317 (722)
Q Consensus       239 ~-~~~~plivIv~dN~~~s~~t~~~~~~~~~g~l~~~l~~~~~~~~~~~~r~~~~~i~~~~g~~~~~~~~~~~~~~~~~~  317 (722)
                      + ..+.|||||+|||+||        |++|+|+++++|+++++++.|+++|+..|.+++..|.++....+++++.+|+++
T Consensus       162 g~~~~~~~iVILNDNeMS--------Is~nvGal~~~L~~l~~~~~y~~~~~~~kk~l~~~~~~~~~~~~r~e~~~K~l~  233 (627)
T COG1154         162 GADLKSNLIVILNDNEMS--------ISPNVGALSKHLARLRSGPFYQSLREGGKKVLSKVGPPLKRFAKRAEESIKGLL  233 (627)
T ss_pred             hhccCCCEEEEEeCCCcc--------cCCCccHHHHHHHHHhccchHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhccc
Confidence            9 5569999999999994        899999999999999999999999999999999888899999999999999988


Q ss_pred             CCChhhhHhhcCceEEeecCCCCHHHHHHHHHHHHhcCCCCCEEEEEEeeccCCCcccccccchhhccCCCC---CCCCC
Q 004946          318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGAS---DSNSL  394 (722)
Q Consensus       318 ~~~~~~lfea~G~~~~~~vdGhd~~~l~~al~~a~~~~~~~P~lI~v~T~kG~G~~~ae~~~~~~~~H~~~~---~~tg~  394 (722)
                      .+  ..+||+|||+|+||+||||+++|+.+|+.+|+.  ++|++|||+|.|||||++||.  ++.+||++.+   .++|.
T Consensus       234 ~~--~~lFeelGf~YiGPiDGHni~~Li~~Lk~~kd~--~gPvllHv~T~KGKGY~pAE~--d~~~~H~v~~f~~~~tg~  307 (627)
T COG1154         234 VP--GTLFEELGFNYIGPIDGHNLEELIPTLKNAKDL--KGPVLLHVVTKKGKGYKPAEE--DPIKYHGVGPFDPIETGQ  307 (627)
T ss_pred             Cc--hhhHHHhCCeeECCcCCCCHHHHHHHHHHHhcC--CCCEEEEEEecCCCCCChhhc--ChhhccCCCCCCccccCc
Confidence            87  489999999999999999999999999999994  899999999999999999998  8999999998   47887


Q ss_pred             CCC--CCccchHHHHHHHHHHHHhcCCCEEEEecCCCCccchHHHHHhCCCceeecccchHHHHHHHHHHhcCCCeeEEE
Q 004946          395 PFG--NYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCI  472 (722)
Q Consensus       395 ~~~--~~~~s~~~a~~~~L~~~~~~d~~iv~i~ad~~~~~~l~~f~~~~p~R~~d~GIaE~~av~~AaGlA~~G~~p~~~  472 (722)
                      +.+  +...+|+++|+++|++++++|++||+|||+|..++||..|+++||+||||+||||||||++|+|||++|+||||+
T Consensus       308 ~~~~~~~~~sys~vf~~~L~~~a~~d~~ivaITaAM~~gtGL~~F~~~fP~R~fDVGIAEQHAVT~AAGlA~~G~kPvva  387 (627)
T COG1154         308 SKKSKPSAPSYTKVFGDTLCELAAKDEKIVAITAAMPEGTGLVKFSKKFPDRFFDVGIAEQHAVTFAAGLAAEGMKPVVA  387 (627)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEecCCCCCCChHHHHHhCchhheehhhhHHHHHHHHHHHHhCCCCCEEE
Confidence            655  566789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecHhhHHHHHHHHHHHHhcCCCCEEEEEeCCCccCCCCCCcCcHHHHHHhcCCCCcEEEeeCCHHHHHHHHHHHhhhCCC
Q 004946          473 IPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR  552 (722)
Q Consensus       473 t~~~Fl~ra~dqi~~~~a~~~lpVv~v~~~~G~~G~dG~TH~~~~d~a~~~~iP~l~V~~Psd~~E~~~~l~~a~~~~~~  552 (722)
                      +||+||||||||++||+|+|++||+|+++|+|++|+||+|||+.+|++|+++||||+|++|+|++|+..|+.+|+..+++
T Consensus       388 IYSTFLQRAYDQliHDvaiqnLPV~faIDRAGivG~DG~TH~G~fDls~l~~iPnmvi~aP~de~el~~ml~ta~~~~~g  467 (627)
T COG1154         388 IYSTFLQRAYDQLIHDVAIQNLPVTFAIDRAGIVGADGPTHQGLFDLSFLRCIPNMVIMAPRDEEELRQMLYTALAQDDG  467 (627)
T ss_pred             EecHHHHHHHHHHHHHHHhccCCeEEEEecCcccCCCCCccccHHHHHHHhcCCCcEEecCCCHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998889


Q ss_pred             CEEEEecCCCcccccCCCCCCCCccccccEEEEEeCCcEEEEEechhhHHHHHHHHHHHhcCCcEEEeecCccccchHHH
Q 004946          553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKL  632 (722)
Q Consensus       553 Pv~ir~~r~~~~~~~~p~~~~~~~~~igk~~vl~eG~dv~lva~Gs~v~~aleAa~~L~~~Gi~v~Vidl~~lkPld~e~  632 (722)
                      |+.|||||++......... ..++ ++|||+++++|.||+|+++|+++..|++|++.|.+.||+++|||+||+||+|+++
T Consensus       468 P~AiRyPrg~~~~~~~~~~-~~~~-~~Gk~~i~~~G~~vail~~G~~~~~al~vae~L~~~Gi~~TVvd~rfvkPlD~~l  545 (627)
T COG1154         468 PVAIRYPRGNGVGVILTPE-LEPL-EIGKGELLKEGEKVAILAFGTMLPEALKVAEKLNAYGISVTVVDPRFVKPLDEAL  545 (627)
T ss_pred             CeEEEecCCCCCCCCcccc-cccc-cccceEEEecCCcEEEEecchhhHHHHHHHHHHHhcCCCcEEEcCeecCCCCHHH
Confidence            9999999998654422211 3456 8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeEEEEcCCC-CCChHHHHHHHHHhcCCCCCCCceEEEecCCccccCCCHHHHHHHcCCCHHHHHHHHHHHh
Q 004946          633 VRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL  711 (722)
Q Consensus       633 i~~~~~~~~~vvvvEe~~-~gG~gs~v~~~l~~~~~~~~~~~v~~ig~~d~f~~~g~~~~l~~~~gl~~~~I~~~i~~ll  711 (722)
                      ++++++.++.+||+||+. .||||+.|++++..+++   ..+++++|+||.|++||+++++++.+|||+++|+++|.+.+
T Consensus       546 l~~La~~h~~~vtlEe~~~~GG~Gs~v~efl~~~~~---~~~v~~lglpd~fi~hg~~~el~~~~gLd~~~i~~~i~~~l  622 (627)
T COG1154         546 LLELAKSHDLVVTLEENVVDGGFGSAVLEFLAAHGI---LVPVLNLGLPDEFIDHGSPEELLAELGLDAEGIARRILEWL  622 (627)
T ss_pred             HHHHHhhcCeEEEEecCcccccHHHHHHHHHHhcCC---CCceEEecCChHhhccCCHHHHHHHcCCCHHHHHHHHHHHH
Confidence            999999999999999998 79999999999999986   47899999999999999999999999999999999999988


Q ss_pred             hcc
Q 004946          712 GRT  714 (722)
Q Consensus       712 ~~~  714 (722)
                      ...
T Consensus       623 ~~~  625 (627)
T COG1154         623 KAR  625 (627)
T ss_pred             hhc
Confidence            654

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2 Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>COG4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PF09363 XFP_C: XFP C-terminal domain; InterPro: IPR018969 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query722
2o1s_A621 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From 1e-112
2o1x_A629 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From 3e-97
3mos_A616 The Structure Of Human Transketolase Length = 616 1e-16
3ooy_A616 Crystal Structure Of Human Transketolase (Tkt) Leng 1e-16
1ik6_A369 3d Structure Of The E1beta Subunit Of Pyruvate Dehy 1e-12
2ozl_B341 Human Pyruvate Dehydrogenase S264e Variant Length = 2e-11
3exe_B329 Crystal Structure Of The Pyruvate Dehydrogenase (E1 5e-11
1w85_B324 The Crystal Structure Of Pyruvate Dehydrogenase E1 5e-09
3duf_B325 Snapshots Of Catalysis In The E1 Subunit Of The Pyr 6e-09
1ni4_B341 Human Pyruvate Dehydrogenase Length = 341 4e-08
1um9_B324 Branched-chain 2-oxo Acid Dehydrogenase (e1) From T 1e-07
3hyl_A690 Crystal Structure Of Transketolase From Bacillus An 1e-06
2bp7_B339 New Crystal Form Of The Pseudomonas Putida Branched 7e-05
1qs0_B338 Crystal Structure Of Pseudomonas Putida 2-Oxoisoval 5e-04
>pdb|2O1S|A Chain A, 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From Escherichia Coli Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  403 bits (1036), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 353/637 (55%), Gaps = 45/637 (7%)
Query: 74  WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
           +D    P L LV++   L+ L  + L +L  E+R  L   VS++     S L  VELTVA
Sbjct: 3   FDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVA 62
Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           LH+V++ P D+++WDVG Q Y HKILTGRR  I T+R+K G+  +  R ESEYD  + GH
Sbjct: 63  LHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGH 122
Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
              S+SAG+G+AVA + +GK    V VI +G   AG A+EA ++AG +  + +VILND+ 
Sbjct: 123 SSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGXAFEAXNHAGDIRPDXLVILNDN- 181
Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
                  E S   ++ AL++ L+++ S K +  LRE  K +   +   + E   + +E+ 
Sbjct: 182 -------EXSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGV-PPIKELLKRTEEHI 233
Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           +G + P   TLFEELG  YIGPVDGH++  LI+ L+    L   GP  +H+ T++ R  E
Sbjct: 234 KGXVVP--GTLFEELGFNYIGPVDGHDVLGLITTLKNXRDL--KGPQFLHIXTKKGRGYE 289
Query: 374 DTQKS----EAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
             +K      A+ K    +      S  LP  +YS+ + D   E     A KD  +  + 
Sbjct: 290 PAEKDPITFHAVPKFDPSSGCLPKSSGGLP--SYSKIFGDWLCET----AAKDNKLXAIT 343
Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
                      F  KFP+RYFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQV
Sbjct: 344 PAXREGSGXVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQV 403
Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           ++DV  Q+LPV F I  AG+VG+DG T  GAFD++++ C+P  ++  PSDE+E    + T
Sbjct: 404 LHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEXVIXTPSDENECRQXLYT 463
Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLK 605
               +D P   RYPRG  V  +L     +P   IGKG V   G+ +A+L +G +     K
Sbjct: 464 GYHYNDGPSAVRYPRGNAVGVELTPLEKLP---IGKGIVKRRGEKLAILNFGTLXPEAAK 520
Query: 606 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 664
               L     + T+ D RF KPLD  L+ E   +H  L+TVEE +I GG GS V+     
Sbjct: 521 VAESL-----NATLVDXRFVKPLDEALILEXAASHEALVTVEENAIXGGAGSGVNE---- 571
Query: 665 DGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 698
             +L +  K  P++   LPD +I   +  +  A  GL
Sbjct: 572 --VLXAHRKPVPVLNIGLPDFFIPQGTQEEXRAELGL 606
>pdb|2O1X|A Chain A, 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From Deinococcus Radiodurans Length = 629 Back     alignment and structure
>pdb|3MOS|A Chain A, The Structure Of Human Transketolase Length = 616 Back     alignment and structure
>pdb|3OOY|A Chain A, Crystal Structure Of Human Transketolase (Tkt) Length = 616 Back     alignment and structure
>pdb|1IK6|A Chain A, 3d Structure Of The E1beta Subunit Of Pyruvate Dehydrogenase From The Archeon Pyrobaculum Aerophilum Length = 369 Back     alignment and structure
>pdb|2OZL|B Chain B, Human Pyruvate Dehydrogenase S264e Variant Length = 341 Back     alignment and structure
>pdb|3EXE|B Chain B, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 329 Back     alignment and structure
>pdb|1W85|B Chain B, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 Length = 324 Back     alignment and structure
>pdb|3DUF|B Chain B, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex Length = 325 Back     alignment and structure
>pdb|1NI4|B Chain B, Human Pyruvate Dehydrogenase Length = 341 Back     alignment and structure
>pdb|1UM9|B Chain B, Branched-chain 2-oxo Acid Dehydrogenase (e1) From Thermus Thermophilus Hb8 In Apo-form Length = 324 Back     alignment and structure
>pdb|3HYL|A Chain A, Crystal Structure Of Transketolase From Bacillus Anthracis Length = 690 Back     alignment and structure
>pdb|2BP7|B Chain B, New Crystal Form Of The Pseudomonas Putida Branched-Chain Dehydrogenase (E1) Length = 339 Back     alignment and structure
>pdb|1QS0|B Chain B, Crystal Structure Of Pseudomonas Putida 2-Oxoisovalerate Dehydrogenase (Branched-Chain Alpha-Keto Acid Dehydrogenase, E1b) Length = 338 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query722
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 0.0
2o1x_A629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 0.0
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 7e-30
2ozl_B341 PDHE1-B, pyruvate dehydrogenase E1 component subun 1e-21
1w85_B324 Pyruvate dehydrogenase E1 component, beta subunit; 1e-19
1umd_B324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 5e-19
2bfd_B342 2-oxoisovalerate dehydrogenase beta subunit; oxido 1e-17
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 7e-17
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 9e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
3l84_A632 Transketolase; TKT, structural genomics, center fo 2e-07
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 2e-07
1gpu_A680 Transketolase; transferase(ketone residues); HET: 7e-07
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 9e-07
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 4e-06
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 5e-06
1r9j_A673 Transketolase; domains, EACH of the alpha/beta typ 1e-05
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 3e-05
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 3e-05
3uk1_A711 Transketolase; structural genomics, seattle struct 5e-05
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Length = 621 Back     alignment and structure
 Score =  834 bits (2158), Expect = 0.0
 Identities = 255/647 (39%), Positives = 362/647 (55%), Gaps = 39/647 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D    P L LV++   L+ L  + L +L  E+R  L   VS++     S L  VELTVAL
Sbjct: 4   DIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V++ P D+++WDVG Q Y HKILTGRR  I T+R+K G+  +  R ESEYD  + GH 
Sbjct: 64  HYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAG+G+AVA + +GK    V VI +G   AG A+EAM++AG +  +M+VILND+  
Sbjct: 124 STSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEM 183

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++ AL++ L+++ S K +  LRE  K +   +   + E   + +E+ +
Sbjct: 184 SISE--------NVGALNNHLAQLLSGKLYSSLREGGKKVFSGVP-PIKELLKRTEEHIK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGPVDGH++  LI+ L+ +  L   GP  +H++T++ R    
Sbjct: 235 GMVVP--GTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLK--GPQFLHIMTKKGRGYEP 290

Query: 372 AE-DTQKSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           AE D     A+ K           S  LP      +Y   F + L   A KD  ++ +  
Sbjct: 291 AEKDPITFHAVPKFDPSSGCLPKSSGGLP------SYSKIFGDWLCETAAKDNKLMAITP 344

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     +  F  KFP+RYFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQV+
Sbjct: 345 AMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVL 404

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPV F I  AG+VG+DG T  GAFD++++ C+P M++M PSDE+E   M+ T 
Sbjct: 405 HDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTG 464

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKA 606
              +D P   RYPRG  V  +L     +P   IGKG V   G+ +A+L +G ++    K 
Sbjct: 465 YHYNDGPSAVRYPRGNAVGVELTPLEKLP---IGKGIVKRRGEKLAILNFGTLMPEAAKV 521

Query: 607 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 665
                   ++ T+ D RF KPLD  L+ E+  +H  L+TVEE +I GG GS V+  +   
Sbjct: 522 AE-----SLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH 576

Query: 666 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
                 V    I LPD +I   +  +  A  GL    + A   + L 
Sbjct: 577 RK---PVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA 620
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Length = 629 Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Length = 616 Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Length = 341 Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Length = 324 Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Length = 324 Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Length = 342 Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Length = 369 Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Length = 338 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Length = 632 Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Length = 651 Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Length = 680 Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Length = 675 Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Length = 700 Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Length = 690 Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Length = 673 Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Length = 669 Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Length = 663 Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Length = 711 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query722
2o1x_A629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 100.0
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 100.0
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 100.0
3l84_A632 Transketolase; TKT, structural genomics, center fo 100.0
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 100.0
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 100.0
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 100.0
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 100.0
3uk1_A711 Transketolase; structural genomics, seattle struct 100.0
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 100.0
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 100.0
1gpu_A680 Transketolase; transferase(ketone residues); HET: 100.0
1r9j_A673 Transketolase; domains, EACH of the alpha/beta typ 100.0
2qtc_A886 Pyruvate dehydrogenase E1 component; thiamin dipho 100.0
3ahc_A845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 100.0
2jgd_A933 2-oxoglutarate dehydrogenase E1 component; flavopr 100.0
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 100.0
2yic_A868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 100.0
2ozl_B341 PDHE1-B, pyruvate dehydrogenase E1 component subun 100.0
1w85_B324 Pyruvate dehydrogenase E1 component, beta subunit; 100.0
2xt6_A1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 100.0
1umd_B324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 100.0
2bfd_B342 2-oxoisovalerate dehydrogenase beta subunit; oxido 100.0
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 100.0
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 99.96
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 99.93
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 99.93
1yd7_A395 2-keto acid:ferredoxin oxidoreductase subunit alph 99.91
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 99.91
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 99.9
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 99.77
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 99.62
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 99.56
3ju3_A118 Probable 2-oxoacid ferredoxin oxidoreductase, ALP; 99.55
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 99.52
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 99.51
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 99.48
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 99.45
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 99.44
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 99.42
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 99.42
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 99.42
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 99.4
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 99.4
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 99.39
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 99.36
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 99.35
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 99.34
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 99.33
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 99.32
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 99.29
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 99.27
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 99.24
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 99.19
2c42_A1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.65
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 93.77
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 93.24
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 93.17
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 92.64
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 92.58
2wvg_A 568 PDC, pyruvate decarboxylase; thiamine diphosphate, 92.36
3eya_A 549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 92.03
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 91.71
2vbi_A 566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 91.66
4feg_A 603 Pyruvate oxidase; carbanion, structure activity re 91.19
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 90.92
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 90.43
2vbf_A 570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 90.11
2nxw_A 565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 89.75
1q6z_A 528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 88.77
3hww_A 556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 88.42
2c31_A 568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 87.29
2vk8_A 563 Pyruvate decarboxylase isozyme 1; asymmetric activ 86.91
3lq1_A 578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 86.78
2x7j_A 604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 85.62
2q28_A 564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 83.39
1ovm_A 552 Indole-3-pyruvate decarboxylase; thiamine diphosph 82.3
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 82.04
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 80.84
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
Probab=100.00  E-value=4.5e-115  Score=1014.46  Aligned_cols=614  Identities=35%  Similarity=0.554  Sum_probs=529.6

Q ss_pred             CCCCccccCCCCchhccCCCHHHHHHHHHHHHHHHHHhHhcCCCCCCCcchHHHHHHHHhhccCCCCcEEEecCCchHHH
Q 004946           76 KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA  155 (722)
Q Consensus        76 ~~~~~~l~~i~~p~~~~~l~~~~l~~la~eiR~~ii~~~~~~gGh~~~slg~vel~~aL~~vf~~p~D~iv~d~GH~~y~  155 (722)
                      ...+|+|++|++|.|+|+++.++|+++++++|+.+++++++++||+++++|+++++.+||++|+.|+|+||||+|||+|+
T Consensus         7 ~~~~~~l~~i~~p~d~~~l~~~~l~~l~~~iR~~~~~~~~~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~~GH~~y~   86 (629)
T 2o1x_A            7 TSDTPLLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITALHYVLDSPRDRILFDVGHQAYA   86 (629)
T ss_dssp             CCSCTTGGGCSSHHHHTTSCGGGHHHHHHHHHHHHHHHHTTSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEESSSTTCHH
T ss_pred             CCCCchhhhCCChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCcCCCchhHHHHHHHHHhhcCCCCCeEEecCchHHHH
Confidence            35579999999999999999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             HHHHhCchhhhhHHHhhCCCCCCCCCCCCCCCCcCcCCCcchHHHHHHHHHHHHHcCCCCeEEEEecCCCcccchHHHHH
Q 004946          156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAM  235 (722)
Q Consensus       156 h~~ltGr~~~~~~~r~~ggl~g~~~~~es~~d~~~~G~~G~~ls~A~G~A~A~~l~~~~~~Vv~viGDGa~~~G~~~EAl  235 (722)
                      |++++|+.+.+.++|++++++|||++.+++|+.+++||+|+++|+|+|+|+|+++++++++|||++|||++++|++||||
T Consensus        87 ~~~l~G~~~~~~~~r~~~g~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL  166 (629)
T 2o1x_A           87 HKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAAL  166 (629)
T ss_dssp             HHHTTTTGGGGGGTTSTTSCCSSCCGGGCTTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHH
T ss_pred             HHHHhCcHhHHhCcccCCCCCCCCCCCCCCCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCEEEEEECCCCCCCCCccCCCCcchhhhhhhhhhhhhhhHHHHHHHHHhhhhhhcCccHHHHHHHHHHHhhc
Q 004946          236 SNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG  315 (722)
Q Consensus       236 n~A~~~~~plivIv~dN~~~s~~t~~~~~~~~~g~l~~~l~~~~~~~~~~~~r~~~~~i~~~~g~~~~~~~~~~~~~~~~  315 (722)
                      |+|+++++|++||+|||+++        ++++++.++.++++++..+.|..++.+.+.+.+.+|.++.....++.++++.
T Consensus       167 ~~A~~~~~pli~IvnnN~~~--------i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~  238 (629)
T 2o1x_A          167 NTIGDMGRKMLIVLNDNEMS--------ISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRH  238 (629)
T ss_dssp             HHHHHHCCSEEEEEEECSBS--------SSBCCSSHHHHC----------------------------------------
T ss_pred             HHHHhhCCCEEEEEECCCCC--------CCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHh
Confidence            99999999999999999983        4566777777788888888888888887776665555544444454555555


Q ss_pred             ccCCChhhhHhhcCceEEeecCCCCHHHHHHHHHHHHhcCCCCCEEEEEEeeccCCCcccccccchhhccCCCC--CCCC
Q 004946          316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGAS--DSNS  393 (722)
Q Consensus       316 ~~~~~~~~lfea~G~~~~~~vdGhd~~~l~~al~~a~~~~~~~P~lI~v~T~kG~G~~~ae~~~~~~~~H~~~~--~~tg  393 (722)
                      ++.|.+..+|++|||++++++||||+++|.++++++++  .++|++||++|.||+||+++|+  ++.+||+.++  +.++
T Consensus       239 ~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~--~~~P~lI~v~t~kg~G~~~~e~--~~~~~H~~~~f~~~~~  314 (629)
T 2o1x_A          239 FFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD--LDGPTILHIVTTKGKGLSYAEA--DPIYWHGPAKFDPATG  314 (629)
T ss_dssp             -----CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT--SSSEEEEEEECCTTTTCHHHHH--CTTGGGSCCSBCTTTC
T ss_pred             hcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh--cCCCEEEEEEEecCCCCChhHc--CCcccccCccCCcCcC
Confidence            44442227999999999989999999999999999987  4899999999999999999987  6789999987  4555


Q ss_pred             CCCCCCccchHHHHHHHHHHHHhcCCCEEEEecCCCCccchHHHHHhCCCceeecccchHHHHHHHHHHhcCCCeeEEEe
Q 004946          394 LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII  473 (722)
Q Consensus       394 ~~~~~~~~s~~~a~~~~L~~~~~~d~~iv~i~ad~~~~~~l~~f~~~~p~R~~d~GIaE~~av~~AaGlA~~G~~p~~~t  473 (722)
                      ...+....+|+++|+++|.+++++|++|+++++||++++++..|+++||+||||+||+|++|+++|+|+|++|+|||++|
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~~~~~f~~~~~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~  394 (629)
T 2o1x_A          315 EYVPSSAYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAI  394 (629)
T ss_dssp             CBCCCCCCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCHHHHHHCGGGEEECCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccccchHHHHHHHHHHHHHHhhhCcCEEEEeccccCCcChHHHHHhcCcceEeccccHHHHHHHHHHHHHcCCEEEEEe
Confidence            42222257999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHhhHHHHHHHHHHHHhcCCCCEEEEEeCCCccCCCCCCcCcHHHHHHhcCCCCcEEEeeCCHHHHHHHHHHHhhhCCCC
Q 004946          474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP  553 (722)
Q Consensus       474 ~~~Fl~ra~dqi~~~~a~~~lpVv~v~~~~G~~G~dG~TH~~~~d~a~~~~iP~l~V~~Psd~~E~~~~l~~a~~~~~~P  553 (722)
                      |++|++|++||+++++|++++||+++++++|++|+||+|||+.+|++++|++|||+|++|+|++|+++++++|++ .++|
T Consensus       395 ~~~F~~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a~~-~~~P  473 (629)
T 2o1x_A          395 YSTFLQRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQT-HDGP  473 (629)
T ss_dssp             EHHHHGGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHHHH-SSSC
T ss_pred             cHHHHHHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHHHh-CCCC
Confidence            999999999999999999999999999999998999999999999999999999999999999999999999997 4899


Q ss_pred             EEEEecCCCcccccCCCCCCCCccccccEEEEEeCCcEEEEEechhhHHHHHHHHHHHhcCCcEEEeecCccccchHHHH
Q 004946          554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLV  633 (722)
Q Consensus       554 v~ir~~r~~~~~~~~p~~~~~~~~~igk~~vl~eG~dv~lva~Gs~v~~aleAa~~L~~~Gi~v~Vidl~~lkPld~e~i  633 (722)
                      ++||++|+..+..+.  ...+.+ ++||++++++|+|++||++|++++.|++|++.|+    +++|||++|++|||++++
T Consensus       474 v~i~~~r~~~~~~~~--~~~~~~-~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa~~L~----~~~Vi~~~~~~Pld~~~i  546 (629)
T 2o1x_A          474 FAIRYPRGNTAQVPA--GTWPDL-KWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNARFVKPLDEEML  546 (629)
T ss_dssp             EEEECCSSBCCCCCT--TCCCCC-CTTCCEEEECCSSEEEEECHHHHHHHHHHHTTCT----TEEEEECCEEESCCHHHH
T ss_pred             EEEEecCCCCCCCcc--cccccc-cCCceEEEeeCCCEEEEEecHHHHHHHHHHHHhc----CCEEEeeCCCCCCcHHHH
Confidence            999999987543221  123456 7899999999999999999999999999999986    899999999999999999


Q ss_pred             HHHhcCCCeEEEEcCCC-CCChHHHHHHHHHhcCCCCCCCceEEEecCCccccCCCHHHHHHHcCCCHHHHHHHHHHHhh
Q 004946          634 RELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG  712 (722)
Q Consensus       634 ~~~~~~~~~vvvvEe~~-~gG~gs~v~~~l~~~~~~~~~~~v~~ig~~d~f~~~g~~~~l~~~~gl~~~~I~~~i~~ll~  712 (722)
                      .+++++++++|||||+. .||||++|++++.++++   +.+++++|++|.|+++|+.+++++++|+|+++|++++++++.
T Consensus       547 ~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~---~~~v~~ig~~d~f~~~g~~~~l~~~~gl~~~~I~~~i~~~~~  623 (629)
T 2o1x_A          547 REVGGRARALITVEDNTVVGGFGGAVLEALNSMNL---HPTVRVLGIPDEFQEHATAESVHARAGIDAPAIRTVLAELGV  623 (629)
T ss_dssp             HHHHHHCSEEEEEEEEESSSSHHHHHHHHHHHTTC---CCEEEEEEECSSCCCSCCHHHHHHHHTCSHHHHHHHHHHTTC
T ss_pred             HHHHhhCCcEEEEecCCCCCCHHHHHHHHHHHhCC---CCCeEEEeeCCcCCCCCCHHHHHHHHCcCHHHHHHHHHHHHh
Confidence            99999999999999997 69999999999999874   578999999999999999999999999999999999998753
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum} Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 722
d1itza2192 c.36.1.6 (A:348-539) Transketolase (TK), Pyr modul 3e-24
d1gpua2197 c.36.1.6 (A:338-534) Transketolase (TK), Pyr modul 1e-23
d1r9ja1190 c.36.1.6 (A:337-526) Transketolase (TK), Pyr modul 2e-22
d1w85b2132 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-bet 2e-21
d2r8oa1195 c.36.1.6 (A:333-527) Transketolase (TK), Pyr modul 2e-21
d1umdb1186 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid 4e-20
d1ik6a2135 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate d 2e-17
d1umdb2137 c.48.1.2 (B:188-324) Branched-chain alpha-keto aci 1e-16
d2bfdb2138 c.48.1.2 (B:205-342) Branched-chain alpha-keto aci 1e-16
d1qs0b2134 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenas 1e-16
d2ozlb2138 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate d 2e-16
d1ik6a1191 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate deh 3e-12
d2ieaa2415 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 com 3e-12
d1qs0b1204 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase 9e-12
d2ozlb1192 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate deh 9e-11
d2bfdb1203 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid 1e-10
d1gpua1335 c.36.1.10 (A:3-337) Transketolase (TK), PP module 3e-09
d2r8oa3136 c.48.1.1 (A:528-663) Transketolase (TK), C-domain 8e-09
d2c42a3157 c.48.1.3 (A:259-415) Pyruvate-ferredoxin oxidoredu 8e-06
d1gpua3146 c.48.1.1 (A:535-680) Transketolase (TK), C-domain 8e-05
d1r9ja3143 c.48.1.1 (A:527-669) Transketolase (TK), C-domain 3e-04
d1itza3136 c.48.1.1 (A:540-675) Transketolase (TK), C-domain 0.002
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Length = 192 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like Pyr module
domain: Transketolase (TK), Pyr module
species: Maize (Zea mays) [TaxId: 4577]

 Score = 98.7 bits (245), Expect = 3e-24
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 8/167 (4%)

Query: 405 DCFIEALVMEAEKDKDIVVVHA------GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTF 458
           +   + L   A     ++   A         + +     ++   ER    G+ E      
Sbjct: 23  NLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTAEERNVRFGVREHGMGAI 82

Query: 459 SAGLA--CGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
             G+A    G  P+C     F       +      +   +  +   +  +G DGPT    
Sbjct: 83  CNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPI 142

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
             +     +PN++++ P+D +E             RP      R  +
Sbjct: 143 EHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKL 189
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 197 Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Length = 190 Back     information, alignment and structure
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 132 Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Length = 195 Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Length = 186 Back     information, alignment and structure
>d1ik6a2 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate dehydrogenase, C-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 135 Back     information, alignment and structure
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 137 Back     information, alignment and structure
>d2bfdb2 c.48.1.2 (B:205-342) Branched-chain alpha-keto acid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 138 Back     information, alignment and structure
>d1qs0b2 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseudomonas putida [TaxId: 303]} Length = 134 Back     information, alignment and structure
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 138 Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 191 Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Length = 415 Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Length = 204 Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 335 Back     information, alignment and structure
>d2r8oa3 c.48.1.1 (A:528-663) Transketolase (TK), C-domain {Escherichia coli [TaxId: 562]} Length = 136 Back     information, alignment and structure
>d2c42a3 c.48.1.3 (A:259-415) Pyruvate-ferredoxin oxidoreductase, PFOR, domain II {Desulfovibrio africanus [TaxId: 873]} Length = 157 Back     information, alignment and structure
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 Back     information, alignment and structure
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]} Length = 143 Back     information, alignment and structure
>d1itza3 c.48.1.1 (A:540-675) Transketolase (TK), C-domain {Maize (Zea mays) [TaxId: 4577]} Length = 136 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query722
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 100.0
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 100.0
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 100.0
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 100.0
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 100.0
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 100.0
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 100.0
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 100.0
d2ieaa2415 Pyruvate dehydrogenase E1 component, PP module {Es 100.0
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 99.97
d1umdb1186 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.97
d2ozlb1192 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.96
d1ik6a1191 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.96
d1w85b1192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d 99.95
d2bfdb1203 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.95
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 99.92
d1w85b2132 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal d 99.92
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 99.92
d1umdb2137 Branched-chain alpha-keto acid dehydrogenase {Ther 99.91
d2bfdb2138 Branched-chain alpha-keto acid dehydrogenase {Huma 99.91
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 99.91
d2ozlb2138 E1-beta subunit of pyruvate dehydrogenase, C-domai 99.91
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 99.91
d1ik6a2135 E1-beta subunit of pyruvate dehydrogenase, C-domai 99.9
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 99.89
d1qs0b2134 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseu 99.89
d1gpua3146 Transketolase (TK), C-domain {Baker's yeast (Sacch 99.77
d2r8oa3136 Transketolase (TK), C-domain {Escherichia coli [Ta 99.7
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 99.65
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.64
d1r9ja3143 Transketolase (TK), C-domain {Leishmania mexicana 99.63
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 99.61
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.6
d1itza3136 Transketolase (TK), C-domain {Maize (Zea mays) [Ta 99.59
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 99.59
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 99.59
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 99.58
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.58
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.57
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.56
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.51
d2ieaa1230 Pyruvate dehydrogenase E1 component, Pyr module {E 99.29
d2c42a3157 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 99.18
d2ieaa3186 Pyruvate dehydrogenase E1 component, C-domain {Esc 98.96
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 98.57
d2c42a2447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 98.08
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 96.07
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 95.98
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 95.94
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 95.89
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 95.84
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 95.69
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 95.0
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 94.82
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 94.65
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 93.94
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 93.52
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 93.22
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 92.71
d1ovma2178 Indole-3-pyruvate decarboxylase {Enterobacter cloa 91.85
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 90.63
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 89.13
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 88.57
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 88.08
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 85.67
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 84.66
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like PP module
domain: Transketolase (TK), PP module
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.1e-41  Score=355.67  Aligned_cols=234  Identities=19%  Similarity=0.250  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHHHHhHhc-CCCCCCCcchHHHHHHHHhhcc-C--------CCCcEEEecCCchH---HHHHHHhCc---
Q 004946           99 LKQLAVEIRSELSSIVSK-TEKSLKSSLAAVELTVALHHVF-H--------APVDKILWDVGEQT---YAHKILTGR---  162 (722)
Q Consensus        99 l~~la~eiR~~ii~~~~~-~gGh~~~slg~vel~~aL~~vf-~--------~p~D~iv~d~GH~~---y~h~~ltGr---  162 (722)
                      ++++|++||..+++++.+ .+||+|++||++|++++||+.| +        .++|+||+|+||++   |+++.++|+   
T Consensus         3 ~~~~a~~iR~~~~d~v~~a~sGH~G~~ls~~~i~~~Ly~~~l~~~~~~p~~~~rDrfilSkGH~~~~~Ya~l~~~G~~~~   82 (331)
T d2r8oa2           3 RKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLP   82 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHhccCcCCCCCCCCCeEEEeccchHHHHHHHHHHhCCCCC
Confidence            689999999999999986 5799999999999999999743 2        24799999999999   888889995   


Q ss_pred             hhhhhHHHhhCC-CCCCCCCCCCCCCCcCcCCCcchHHHHHHHHHHHHHcC----------CCCeEEEEecCCCcccchH
Q 004946          163 RSLIHTLRKKDG-ISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG----------KRECIVTVISNGTTMAGQA  231 (722)
Q Consensus       163 ~~~~~~~r~~gg-l~g~~~~~es~~d~~~~G~~G~~ls~A~G~A~A~~l~~----------~~~~Vv~viGDGa~~~G~~  231 (722)
                      .+++.++|+.|+ +.|||.....++..+++|++|+++|.|+|+|+|.++++          .+++|+|++|||+++||++
T Consensus        83 ~e~l~~f~~~gs~~~ghp~~~~~~gve~stGsLG~Gl~~avG~Ala~k~~~~~~~~~~~~~~~~~v~~l~GDGel~EG~~  162 (331)
T d2r8oa2          83 MEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGIS  162 (331)
T ss_dssp             HHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHH
T ss_pred             HHHHHhcCCCCCCCCCCCCcCcCCCcccCcCchhhhhHHHHHHHHHHHHHhhhhccccccccCceEEEecccccccccch
Confidence            677889999887 88999987788999999999999999999999998753          3688999999999999999


Q ss_pred             HHHHHHhhhcC-CCEEEEEECCCCCCCCCccCCCCcchhhhhhhhhhhhhhhHHHHHHHHHhhhhhhcCccHHHHHHHHH
Q 004946          232 YEAMSNAGYLD-SNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD  310 (722)
Q Consensus       232 ~EAln~A~~~~-~plivIv~dN~~~s~~t~~~~~~~~~g~l~~~l~~~~~~~~~~~~r~~~~~i~~~~g~~~~~~~~~~~  310 (722)
                      |||+++|++++ .||++|+++|+++ +       +.++..                                        
T Consensus       163 wEA~~~A~~~kL~nLi~i~D~N~~~-~-------~g~~~~----------------------------------------  194 (331)
T d2r8oa2         163 HEVCSLAGTLKLGKLIAFYDDNGIS-I-------DGHVEG----------------------------------------  194 (331)
T ss_dssp             HHHHHHHHHTTCTTEEEEEEECSEE-T-------TEEGGG----------------------------------------
T ss_pred             hHhhhhcchhcccceeeHHhhhhhc-c-------cccccc----------------------------------------
Confidence            99999999999 7999999999974 1       111110                                        


Q ss_pred             HHhhcccCCChhhhHhhcCceEEeecCCCCHHHHHHHHHHHHhcCCCCCEEEEEEeeccCCCcccccccchhhccCCCC
Q 004946          311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGAS  389 (722)
Q Consensus       311 ~~~~~~~~~~~~~lfea~G~~~~~~vdGhd~~~l~~al~~a~~~~~~~P~lI~v~T~kG~G~~~ae~~~~~~~~H~~~~  389 (722)
                           ....+...+|++|||+++.++||||.+++.++++++++. .++|++|+++|+||+|.+.+|+   ..+||+.++
T Consensus       195 -----~~~~~~~~rf~afGw~vi~~~dghd~~~i~~A~~~a~~~-~~kP~~Ii~~TikGkG~~~~e~---~~~~Hg~~l  264 (331)
T d2r8oa2         195 -----WFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAV-TDKPSLLMCKTIIGFGSPNKAG---THDSHGAPL  264 (331)
T ss_dssp             -----TCCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC-CSSCEEEEEECCTTTTCTTTTT---SGGGTSSCC
T ss_pred             -----ccchhHHHHHHHcCCeeecccccchHHHHHHHHHHHHhh-cCCCccceeeeeeecCCcccCC---CchhhcCCC
Confidence                 011123568999999998889999999999999999874 5789999999999999999986   889999986
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2bfdb2 c.48.1.2 (B:205-342) Branched-chain alpha-keto acid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ik6a2 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate dehydrogenase, C-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0b2 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa3 c.48.1.1 (A:528-663) Transketolase (TK), C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1itza3 c.48.1.1 (A:540-675) Transketolase (TK), C-domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ieaa1 c.36.1.6 (A:471-700) Pyruvate dehydrogenase E1 component, Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a3 c.48.1.3 (A:259-415) Pyruvate-ferredoxin oxidoreductase, PFOR, domain II {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2ieaa3 c.48.1.1 (A:701-886) Pyruvate dehydrogenase E1 component, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure