Citrus Sinensis ID: 005250

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700------

MIELSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

cHHHHHHHHHHHccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEcccccccccccccccccccccccccccccccccccccccEEccccHHHHccccEEcccccccccccEEEEEEEccccccccccccccccccccccccccccccEEcccccccccHHHHHccccccccccccccccccccccEEEcccccccccEEEcEEEccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccccccEEEEEEcccccccHHHHHHHHHHHcccccEEEEccccccHHHHHHHHccccEEEEEEcccccHHHHHHHHHHccccccccEEEEcccccccHHHHHccccccccccccccHHHHHHccccccccccccEEEEEEcccccHHHHHHHcHHccccccccHHHHHHHHHHHccccccccccccccccEEEEHHHHHHHHcccccccccEEEEEEcccEEcccccccEEEEEccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHccccccEEEccccEEEEEEcccccEEEccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcc

cccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccEEHHHHHHcccccccccccccEEEEEEEEEEccHccccccccccEccccccccccEEEEEEEEEccccccccccccccccccEEEEEcccccEEEEEEEEEHHHHHHHHHcHHccccccccccHHcccccEEEEEEccccccccEEEcccEEEEEcEccEEEEEEEEHHHHHHccccccccccccccccccccccccEEcccccEEEEcccccccccccccccccccEcccccccccccEEEEEEccccccccEEEEEccccccccHHHHHHHHHHHHcccHEEEccccccccHHHHHHHcccccEEEEEcccccHHHHHHHHHHHcccccccEEEEEcccccHHHHHHccccccccccccccHHHHHHHHHcccEEEEccEEEEEEccccccccccccHHHHHcHEcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccEccccccccEEEEEEccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHccccccEEEEcEEEEEEEEccccEEEccccccccccEEEEEEcccHHHHcccccccccHHHHHHHHHHHHHHHcccEcHHHHHHHHHHHHHHHc

MIELSTSLLRLLtssnvygygpfffgSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKklnvplshhtwmedfsngeqpstccvcltslvlpqsvgahfpvhrcavcgvaahffcseftakdcKCVAQACFshvkhhwserwvnmddnaeLSAFCfycdepcgvpfindcptwhclwcqrrihvKCHAImskesgdvcdlgphrrlilsplcvkeneeniggRMLSSIKEGIrassvrgkikrkrhqgkagkshsvneklqdttsTNSALKYMFNGFvglksnnekniecskvdgsihsnsthnesiqktggtvicgqvkkyslvdvpqdarPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELsasqgpevglELFSNFQYFRVLVCGGDGTVAWVLNAIEkrnfespppvavlplgtgndmsrvlqwgrgfsmvdghgglSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVtrqenpqkFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEvdgkgieipkdsegLIVLNIGsymggvdlwqndsehdddfspqsmhdKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIrihssspfpvqidgepfiqqagcldithhgqvftlrrapeeprghaTAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

MIELSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKesgdvcdlgphrRLILsplcvkeneeniggrmlssikegirassvrgkikrkrhqgkagkshsvneklqdttsTNSALKYMFNGFVGLKSNNEKNIECSKVDgsihsnsthnesiqktggTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIReenseydqrkeQSKFMLNYLGIGCDAKVAYEFHVTRqenpqkfssrFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

MIElstsllrlltssNVygygpfffgsfgLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

******SLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKEN*****************************************************LKYMFNGFVGLK****************************TGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIR*************KFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQN**************DKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAP***RGHATAIMTEVLLDAECKGIINASQRKVLLQQIA****

***LSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAAR**********VPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGS*****************VICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFT*****************************NASQRKVLLQQIALQ**

MIELSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASS**************************TTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

***LSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIEC**************************GQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

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SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MIELSTSLLRLLTSSNVYGYGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMxxxxxxxxxxxxxxxxxxxxxSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		706	2.2.26 [Sep-21-2011]
Q39017		728	Diacylglycerol kinase 1 O	no	no	0.960	0.931	0.512	0.0
Q6NS52		802	Diacylglycerol kinase bet	yes	no	0.730	0.643	0.315	5e-71
Q9Y6T7		804	Diacylglycerol kinase bet	yes	no	0.730	0.641	0.319	2e-70
P49619		791	Diacylglycerol kinase gam	no	no	0.478	0.427	0.410	4e-70
P49621		801	Diacylglycerol kinase bet	yes	no	0.730	0.644	0.310	5e-70
P49620		788	Diacylglycerol kinase gam	no	no	0.511	0.458	0.385	4e-67
P52824		942	Diacylglycerol kinase the	no	no	0.473	0.354	0.429	5e-67
Q91WG7		788	Diacylglycerol kinase gam	no	no	0.478	0.428	0.4	7e-67
Q6P5E8		934	Diacylglycerol kinase the	no	no	0.467	0.353	0.425	2e-65
Q03603		795	Probable diacylglycerol k	no	no	0.477	0.423	0.376	8e-64

>sp\|Q39017\|DGK1_ARATH Diacylglycerol kinase 1 OS=Arabidopsis thaliana GN=DGK1 PE=1 SV=2	Back alignment and function desciption

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/702 (51%), Positives = 462/702 (65%), Gaps = 24/702 (3%)

Query: 23  FFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQP 82
           F     G+L I Y +F+W+R  +L+W K  AR+KK    +  VP++ H+W  D     + 
Sbjct: 33  FVAALVGILTIAYTAFQWRRNINLSWTKAIARSKKNPKARHKVPVAPHSWELDPIARAKN 92

Query: 83  STCCVCLTSLVLPQS-VGAHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHW 141
             CCVCL S+   Q+ V +    HRC +CG AAHF CS    KDCKCV+   F HV H W
Sbjct: 93  LNCCVCLKSMSPSQAIVASESFFHRCTICGAAAHFNCSSSAPKDCKCVSMVGFEHVVHQW 152

Query: 142 SERWVNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVC 201
           + RW    D  + S+FC YCDE C   F+   P W CLWCQR +HV CH+ MS E+GD+C
Sbjct: 153 AVRWTEGADQTDDSSFCSYCDESCSSSFLGGSPIWCCLWCQRLVHVDCHSNMSNETGDIC 212

Query: 202 DLGPHRRLILSPLCVKENEENIGGRMLSSIKEGIR--ASSVRGKI-----KRKRHQGKAG 254
           DLGP RRLIL PL VKE   N  G  LSSI  G    AS+    I     K K+    + 
Sbjct: 213 DLGPLRRLILCPLYVKELTRNPSGGFLSSITHGANELASTALASIRIQSKKYKQTNETSA 272

Query: 255 KSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEKNIECSKVDGSIHSNST--HNESIQK 312
            + +      ++T + +      NG   +  N+   +     +G   SN       S+++
Sbjct: 273 DTGNSGSNCDESTESTADTGPTVNGAHAVLENSISVMNGDSSNGDSDSNGKLEKKPSVKR 332

Query: 313 TGGTVICGQVK--------KYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPA 364
           TG     GQ +        KY L D+P DARPLLVFIN KSG Q G  LR+RL++ LNP 
Sbjct: 333 TGSF---GQKEYHALRSKLKYELADLPSDARPLLVFINKKSGAQRGDSLRQRLHLHLNPV 389

Query: 365 QVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGT 424
           QVFELS+ QGPEVGL LF    +FRVLVCGGDGT  WVL+AIEK+NF SPP VA+LP GT
Sbjct: 390 QVFELSSVQGPEVGLFLFRKVPHFRVLVCGGDGTAGWVLDAIEKQNFISPPAVAILPAGT 449

Query: 425 GNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSK 484
           GND+SRVL WG G   V+  GGLST+L +IEHAAVT+LDRWKV+I  +     ++ +  K
Sbjct: 450 GNDLSRVLNWGGGLGSVERQGGLSTVLQNIEHAAVTVLDRWKVSILNQQG---KQLQPPK 506

Query: 485 FMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVW 544
           +M NY+G+GCDAKVA E H  R+ENP++F S+F+NK+LYA+EGAR I+DRT  + PWQV 
Sbjct: 507 YMNNYIGVGCDAKVALEIHNLREENPERFYSQFMNKVLYAREGARSIMDRTFEDFPWQVR 566

Query: 545 LEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGA 604
           +EVDG  IE+P+D+EG++V NIGSYMGGVDLWQN+ E  ++F PQSMHDK++EVV + G 
Sbjct: 567 VEVDGVDIEVPEDAEGILVANIGSYMGGVDLWQNEDETYENFDPQSMHDKIVEVVSISGT 626

Query: 605 WHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRA 664
           WHLGKLQVGLS+ARRLAQG  ++I   +P PVQIDGEP+ QQ   L I+HHGQ F L+RA
Sbjct: 627 WHLGKLQVGLSRARRLAQGSAVKIQLCAPLPVQIDGEPWNQQPCTLTISHHGQAFMLKRA 686

Query: 665 PEEPRGHATAIMTEVLLDAECKGIINASQRKVLLQQIALQLS 706
            EEP GHA AI+T+VL +AE   +INASQ++ LLQ++AL+L+
Sbjct: 687 AEEPLGHAAAIITDVLENAETNQVINASQKRTLLQEMALRLT 728

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 0EC: 7

>sp\|Q6NS52\|DGKB_MOUSE Diacylglycerol kinase beta OS=Mus musculus GN=Dgkb PE=2 SV=2	Back alignment and function description

>sp\|Q9Y6T7\|DGKB_HUMAN Diacylglycerol kinase beta OS=Homo sapiens GN=DGKB PE=2 SV=2	Back alignment and function description

>sp\|P49619\|DGKG_HUMAN Diacylglycerol kinase gamma OS=Homo sapiens GN=DGKG PE=2 SV=3	Back alignment and function description

>sp\|P49621\|DGKB_RAT Diacylglycerol kinase beta OS=Rattus norvegicus GN=Dgkb PE=2 SV=1	Back alignment and function description

>sp\|P49620\|DGKG_RAT Diacylglycerol kinase gamma OS=Rattus norvegicus GN=Dgkg PE=2 SV=1	Back alignment and function description

>sp\|P52824\|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens GN=DGKQ PE=1 SV=2	Back alignment and function description

>sp\|Q91WG7\|DGKG_MOUSE Diacylglycerol kinase gamma OS=Mus musculus GN=Dgkg PE=2 SV=1	Back alignment and function description

>sp\|Q6P5E8\|DGKQ_MOUSE Diacylglycerol kinase theta OS=Mus musculus GN=Dgkq PE=1 SV=1	Back alignment and function description

>sp\|Q03603\|DGK3_CAEEL Probable diacylglycerol kinase 3 OS=Caenorhabditis elegans GN=dgk-3 PE=3 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		706
225438325		714	PREDICTED: diacylglycerol kinase 1-like	0.983	0.971	0.728	0.0
15242890		712	diacylglycerol kinase 2 [Arabidopsis tha	0.995	0.987	0.688	0.0
297793961		711	ATDGK2 [Arabidopsis lyrata subsp. lyrata	0.994	0.987	0.687	0.0
224093684		713	predicted protein [Populus trichocarpa]	0.971	0.962	0.711	0.0
224081076		712	predicted protein [Populus trichocarpa]	0.971	0.963	0.696	0.0
356512878		704	PREDICTED: diacylglycerol kinase 1-like	0.978	0.981	0.662	0.0
357520177		729	Diacylglycerol kinase eta [Medicago trun	0.975	0.945	0.649	0.0
357160458		705	PREDICTED: diacylglycerol kinase 1-like	0.983	0.984	0.594	0.0
108862351		707	Diacylglycerol kinase 1, putative, expre	0.980	0.978	0.596	0.0
326500954		707	predicted protein [Hordeum vulgare subsp	0.981	0.980	0.585	0.0

>gi\|225438325\|ref\|XP_002272045.1\| PREDICTED: diacylglycerol kinase 1-like [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1042 bits (2694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/704 (72%), Positives = 583/704 (82%), Gaps = 10/704 (1%)

Query: 1   MIELSTSLLRLLTSSNVYG---YGPFFFGSFGLLAILYASFKWQRRTSLNWIKDAARAKK 57
           MI+LS SLLRLLT+ + YG   +G    GSFG+LAI+YA  KWQRRTSLNWIK AA+AKK
Sbjct: 1   MIDLSNSLLRLLTTPDAYGPSVFGWLITGSFGILAIIYAFLKWQRRTSLNWIKAAAKAKK 60

Query: 58  KFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCLTSLVLPQSVGA----HFPVHRCAVCGVA 113
           K WK+LNVPLSHH+W E+F+   QP TC VCLTSLV PQ++GA      PVHRC+VCGVA
Sbjct: 61  KVWKRLNVPLSHHSWTEEFAYDVQPCTCSVCLTSLVSPQTLGAKATPQNPVHRCSVCGVA 120

Query: 114 AHFFCSEFTAKDCKCVAQACFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDC 173
           AHF CS+F AKDCKCVAQA F HV+H WSERW++MDDN E+SAFCFYCDEPCGVP + D 
Sbjct: 121 AHFHCSKFAAKDCKCVAQAGFGHVQHQWSERWIDMDDNHEMSAFCFYCDEPCGVPLL-DA 179

Query: 174 PTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRLILSPLCVKENEENIG-GRMLSSIK 232
           PTWHCLWCQR IHVKCHA MS+ESGDVCDLG  RRLILSP+CVKE +E I   RMLSSI 
Sbjct: 180 PTWHCLWCQRLIHVKCHAKMSEESGDVCDLGALRRLILSPICVKEVDEEITRSRMLSSIT 239

Query: 233 EGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLK-SNNEKNI 291
             I ASSV G+I+R+RH+ K G   SVN KLQ+T+  N+AL+Y+ NG   LK S+N+   
Sbjct: 240 GDIIASSVCGEIRRRRHRNKHGSVRSVNGKLQNTSPANTALQYVLNGLASLKQSSNQNKD 299

Query: 292 ECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQDARPLLVFINAKSGGQLGH 351
              K  G + S        QK G ++  GQVKKY+LVD+PQDARPLLVFIN KSG Q G 
Sbjct: 300 PILKRGGRVLSGKDTQNGWQKKGRSIPYGQVKKYTLVDLPQDARPLLVFINTKSGAQYGP 359

Query: 352 YLRRRLNMLLNPAQVFELSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNF 411
            LRRRLNMLLNP QVFELS+SQGPE GL  FSN QYFRVLVCGGDGTVAWVL+AIE+ NF
Sbjct: 360 SLRRRLNMLLNPVQVFELSSSQGPEAGLNFFSNVQYFRVLVCGGDGTVAWVLDAIERHNF 419

Query: 412 ESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIRE 471
           ESPPPVAVLPLGTGND+SRVLQWGRGFS V+G GGLST+L DI  AAVTMLDRW+VNI+E
Sbjct: 420 ESPPPVAVLPLGTGNDLSRVLQWGRGFSTVNGQGGLSTLLADINIAAVTMLDRWEVNIQE 479

Query: 472 ENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDI 531
           E S+ D+ K QSKFM+NYLGIGCDAKVAYEFH  R+E P+KF S+FVNKL YAKEGA+DI
Sbjct: 480 ERSDSDRCKVQSKFMMNYLGIGCDAKVAYEFHTMREEKPEKFYSQFVNKLRYAKEGAKDI 539

Query: 532 VDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSM 591
           +DRTCA+LPWQVWLEVDG+ I+IPKD+EGLIVLNIGSYMGGVDLWQND EHDDDF+ Q M
Sbjct: 540 MDRTCADLPWQVWLEVDGRDIQIPKDAEGLIVLNIGSYMGGVDLWQNDYEHDDDFNLQCM 599

Query: 592 HDKVLEVVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLD 651
           HDK+LEVVC+ GAWHLGKLQVGLSQARR+AQGKVIRIH+SS FPVQIDGEPFIQQ GCL+
Sbjct: 600 HDKMLEVVCISGAWHLGKLQVGLSQARRVAQGKVIRIHASSAFPVQIDGEPFIQQPGCLE 659

Query: 652 ITHHGQVFTLRRAPEEPRGHATAIMTEVLLDAECKGIINASQRK 695
           ITHHGQVF LRRA EEPRGH  AIMTEVL+DAEC+G+INA+Q+K
Sbjct: 660 ITHHGQVFMLRRASEEPRGHPAAIMTEVLVDAECRGVINAAQKK 703

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242890|ref|NP_201182.1| diacylglycerol kinase 2 [Arabidopsis thaliana] gi|10177058|dbj|BAB10470.1| diacylglycerol kinase [Arabidopsis thaliana] gi|17065158|gb|AAL32733.1| diacylglycerol kinase [Arabidopsis thaliana] gi|31711750|gb|AAP68231.1| At5g63770 [Arabidopsis thaliana] gi|39579125|gb|AAR28755.1| diacylglycerol kinase 2 [Arabidopsis thaliana] gi|110737383|dbj|BAF00636.1| diacylglycerol kinase [Arabidopsis thaliana] gi|332010412|gb|AED97795.1| diacylglycerol kinase 2 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297793961\|ref\|XP_002864865.1\| ATDGK2 [Arabidopsis lyrata subsp. lyrata] gi\|297310700\|gb\|EFH41124.1\| ATDGK2 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|224093684\|ref\|XP_002309954.1\| predicted protein [Populus trichocarpa] gi\|222852857\|gb\|EEE90404.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224081076\|ref\|XP_002306287.1\| predicted protein [Populus trichocarpa] gi\|222855736\|gb\|EEE93283.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356512878\|ref\|XP_003525142.1\| PREDICTED: diacylglycerol kinase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|357520177\|ref\|XP_003630377.1\| Diacylglycerol kinase eta [Medicago truncatula] gi\|355524399\|gb\|AET04853.1\| Diacylglycerol kinase eta [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357160458\|ref\|XP_003578771.1\| PREDICTED: diacylglycerol kinase 1-like isoform 1 [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|108862351\|gb\|ABA96787.2\| Diacylglycerol kinase 1, putative, expressed [Oryza sativa Japonica Group] gi\|222616828\|gb\|EEE52960.1\| hypothetical protein OsJ_35604 [Oryza sativa Japonica Group]	Back alignment and taxonomy information

>gi\|326500954\|dbj\|BAJ95143.1\| predicted protein [Hordeum vulgare subsp. vulgare] gi\|326512994\|dbj\|BAK03404.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		706
TAIR\|locus:2160604		712	DGK2 "diacylglycerol kinase 2"	0.954	0.946	0.705	8.1e-266
TAIR\|locus:2142788		728	DGK1 "diacylglycerol kinase1"	0.954	0.925	0.517	2.4e-186
UNIPROTKB\|F1NY56		917	DGKQ "Uncharacterized protein"	0.467	0.359	0.435	3.9e-78
UNIPROTKB\|J9NY96		802	DGKB "Uncharacterized protein"	0.427	0.376	0.399	8.9e-77
UNIPROTKB\|F8WD28		804	DGKB "Diacylglycerol kinase be	0.429	0.376	0.396	1.3e-76
UNIPROTKB\|Q9Y6T7		804	DGKB "Diacylglycerol kinase be	0.429	0.376	0.396	1.3e-76
UNIPROTKB\|H0YA20		876	DGKQ "Diacylglycerol kinase th	0.473	0.381	0.437	1.4e-76
UNIPROTKB\|B5MCD5		796	DGKB "Diacylglycerol kinase be	0.427	0.379	0.399	1.6e-76
UNIPROTKB\|B5MBY2		803	DGKB "Diacylglycerol kinase be	0.427	0.376	0.399	2.4e-76
UNIPROTKB\|P52824		942	DGKQ "Diacylglycerol kinase th	0.473	0.354	0.437	2.8e-76

TAIR\|locus:2160604 DGK2 "diacylglycerol kinase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2557 (905.2 bits), Expect = 8.1e-266, P = 8.1e-266
 Identities = 482/683 (70%), Positives = 549/683 (80%)

Query:    30 LLAILYASFKWQRRTSLNWIKDAARAKKKFWKKLNVPLSHHTWMEDFSNGEQPSTCCVCL 89
             LLA++Y   KWQ++TSLNW+K AAR KKK WK+L VPLSHH W +D+  G+QPSTCCVCL
Sbjct:    33 LLAVIYTFLKWQKKTSLNWVKAAAREKKKVWKRLRVPLSHHQWTDDYGYGQQPSTCCVCL 92

Query:    90 TSLVLPQSVG----AHFPVHRCAVCGVAAHFFCSEFTAKDCKCVAQACFSHVKHHWSERW 145
              SLV  Q+V        PVHRCAVCGVAAHF+CS   AKDCKCVAQA   HV+HHWSERW
Sbjct:    93 YSLVPGQNVSNKASLSIPVHRCAVCGVAAHFYCSSSAAKDCKCVAQAGSDHVRHHWSERW 152

Query:   146 VNMDDNAELSAFCFYCDEPCGVPFINDCPTWHCLWCQRRIHVKCHAIMSKESGDVCDLGP 205
             VNMDDNA+++AFCFYCDEPCG+PFI   P WHCLWCQR IHVKCH IMSKESGD CDLG 
Sbjct:   153 VNMDDNADMTAFCFYCDEPCGIPFIEASPMWHCLWCQRLIHVKCHMIMSKESGDACDLGS 212

Query:   206 HRRLILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQD 265
              RR+ILSP+ VK NE N    +L++IK  +  +S+RG ++RKRH+GK G   S+N KL +
Sbjct:   213 LRRVILSPVHVKLNEANGVDGVLTTIKNEL--ASIRGHVRRKRHRGKNGNGQSLNGKLLE 270

Query:   266 TTSTNSALKYMFNGFVGLKSNNEKNIECSK-VDGSIHSNSTHNE-SIQKTGGTVICGQVK 323
               S +  +K + NG V  K   +++I+C K V    ++    N     K   +     +K
Sbjct:   271 D-SVSDPVKTVVNGLVVKKLRRDRSIDCLKQVSDMPNAKGLQNGIGGHKRNKSAALNFMK 329

Query:   324 KYSLVDVPQDARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFS 383
             K+SLVD+P DARPLLVFINAKSGGQLG +L RRLNMLLNP QVFEL + QGP+ GL+L S
Sbjct:   330 KFSLVDLPPDARPLLVFINAKSGGQLGPFLHRRLNMLLNPVQVFELGSCQGPDAGLDLCS 389

Query:   384 NFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDG 443
               +YFRVLVCGGDGTVAWVL+AIEKRNFESPPPVA+LPLGTGND+SRVLQWGRG S+VDG
Sbjct:   390 KVKYFRVLVCGGDGTVAWVLDAIEKRNFESPPPVAILPLGTGNDLSRVLQWGRGISVVDG 449

Query:   444 HGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFH 503
              G L T L DI+HAAVTMLDRW V I EE++E    +E  KFM+NYLGIGCDAKVAYEFH
Sbjct:   450 QGSLRTFLQDIDHAAVTMLDRWSVKIVEESTEKFPAREGHKFMMNYLGIGCDAKVAYEFH 509

Query:   504 VTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIV 563
             + RQE P+KF S+FVNKL YAKEGARDI+DR CA+LPWQVWLEVDGK IEIPKDSEGLIV
Sbjct:   510 MMRQEKPEKFCSQFVNKLRYAKEGARDIMDRACADLPWQVWLEVDGKDIEIPKDSEGLIV 569

Query:   564 LNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRLAQG 623
             LNIGSYMGGVDLWQND EHDD+FS Q MHDK LEVVCV GAWHLGKLQVGLSQARRLAQG
Sbjct:   570 LNIGSYMGGVDLWQNDYEHDDNFSIQCMHDKTLEVVCVRGAWHLGKLQVGLSQARRLAQG 629

Query:   624 KVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEPRGHATAIMTEVLLDA 683
             KVIRIH SSPFPVQIDGEPFIQQ GCL+ITHHGQVF LRRA +EPRGHA AIM EVLLDA
Sbjct:   630 KVIRIHVSSPFPVQIDGEPFIQQPGCLEITHHGQVFMLRRASDEPRGHAAAIMNEVLLDA 689

Query:   684 ECKGIINASQRKVLLQQIALQLS 706
             ECKG+INASQ+KVLLQQ+AL LS
Sbjct:   690 ECKGVINASQKKVLLQQMALHLS 712

GO:0004143 "diacylglycerol kinase activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0007205 "protein kinase C-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0009409 "response to cold" evidence=TAS

GO:0009611 "response to wounding" evidence=IEP

GO:0048364 "root development" evidence=IMP

GO:0048366 "leaf development" evidence=IMP

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

TAIR\|locus:2142788 DGK1 "diacylglycerol kinase1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NY56 DGKQ "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|J9NY96 DGKB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F8WD28 DGKB "Diacylglycerol kinase beta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y6T7 DGKB "Diacylglycerol kinase beta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|H0YA20 DGKQ "Diacylglycerol kinase theta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|B5MCD5 DGKB "Diacylglycerol kinase beta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|B5MBY2 DGKB "Diacylglycerol kinase beta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|P52824 DGKQ "Diacylglycerol kinase theta" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.107	0.946
3rd Layer	2.7.1	0.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		706
pfam00609		157	pfam00609, DAGK_acc, Diacylglycerol kinase accesso	6e-78
smart00045		160	smart00045, DAGKa, Diacylglycerol kinase accessory	7e-66
smart00046		124	smart00046, DAGKc, Diacylglycerol kinase catalytic	2e-38
pfam00781		127	pfam00781, DAGK_cat, Diacylglycerol kinase catalyt	2e-31
COG1597		301	COG1597, LCB5, Sphingosine kinase and enzymes rela	5e-18
pfam00130		53	pfam00130, C1_1, Phorbol esters/diacylglycerol bin	6e-08
TIGR00147		293	TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/Bm	2e-07
PRK13059		295	PRK13059, PRK13059, putative lipid kinase; Reviewe	2e-06
PRK13057		287	PRK13057, PRK13057, putative lipid kinase; Reviewe	5e-06
PRK13054		300	PRK13054, PRK13054, lipid kinase; Reviewed	4e-05
PRK13055		334	PRK13055, PRK13055, putative lipid kinase; Reviewe	1e-04
smart00109		50	smart00109, C1, Protein kinase C conserved region	0.001
smart00109		50	smart00109, C1, Protein kinase C conserved region	0.002

>gnl\|CDD\|216019 pfam00609, DAGK_acc, Diacylglycerol kinase accessory domain	Back alignment and domain information

 Score =  245 bits (629), Expect = 6e-78
 Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 1/158 (0%)

Query: 485 FMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVW 544
            M NY  IG DA++A  FH  R+E+P+ F+SR  NKL+Y K G + ++ R+C  L  +V 
Sbjct: 1   VMNNYFSIGVDARIALGFHRLREEHPELFNSRLKNKLIYGKFGFKKMLQRSCKNLIEKVE 60

Query: 545 LEVDGKGIEIPKDSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGA 604
           LEVDGK + +P   EG++VLNI SY GG DLW N  E D  F PQS+ D +LEVV + GA
Sbjct: 61  LEVDGKDVPLPSSLEGIVVLNIPSYAGGTDLWGNSKE-DGLFEPQSVDDGLLEVVGLTGA 119

Query: 605 WHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEP 642
            HLG++QVGL  A+R+AQG  IRI +    P+Q+DGEP
Sbjct: 120 LHLGQVQVGLGSAKRIAQGGPIRIETKKKIPMQVDGEP 157

Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. This domain is assumed to be an accessory domain: its function is unknown. Length = 157

>gnl\|CDD\|214486 smart00045, DAGKa, Diacylglycerol kinase accessory domain (presumed)	Back alignment and domain information

>gnl\|CDD\|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>gnl\|CDD\|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain	Back alignment and domain information

>gnl\|CDD\|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>gnl\|CDD\|215738 pfam00130, C1_1, Phorbol esters/diacylglycerol binding domain (C1 domain)	Back alignment and domain information

>gnl\|CDD\|161732 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>gnl\|CDD\|183858 PRK13059, PRK13059, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183857 PRK13057, PRK13057, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237281 PRK13054, PRK13054, lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)	Back alignment and domain information

>gnl\|CDD\|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		706
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	100.0
KOG1169		634	consensus Diacylglycerol kinase [Lipid transport a	100.0
KOG1170		1099	consensus Diacylglycerol kinase [Lipid transport a	100.0
PRK13057		287	putative lipid kinase; Reviewed	100.0
PRK11914		306	diacylglycerol kinase; Reviewed	100.0
PRK13337		304	putative lipid kinase; Reviewed	100.0
PRK13059		295	putative lipid kinase; Reviewed	100.0
PRK13054		300	lipid kinase; Reviewed	100.0
PRK13055		334	putative lipid kinase; Reviewed	100.0
TIGR03702		293	lip_kinase_YegS lipid kinase YegS. Members of this	100.0
PRK00861		300	putative lipid kinase; Reviewed	100.0
TIGR00147		293	lipid kinase, YegS/Rv2252/BmrU family. The E. coli	100.0
COG1597		301	LCB5 Sphingosine kinase and enzymes related to euk	100.0
PRK12361		547	hypothetical protein; Provisional	100.0
PLN02958		481	diacylglycerol kinase/D-erythro-sphingosine kinase	100.0
PF00609		161	DAGK_acc: Diacylglycerol kinase accessory domain;	100.0
PLN02204		601	diacylglycerol kinase	100.0
KOG1116		579	consensus Sphingosine kinase, involved in sphingol	99.94
smart00045		160	DAGKa Diacylglycerol kinase accessory domain (pres	99.89
smart00046		124	DAGKc Diacylglycerol kinase catalytic domain (pres	99.86
KOG0696		683	consensus Serine/threonine protein kinase [Signal	99.84
PF00781		130	DAGK_cat: Diacylglycerol kinase catalytic domain;	99.82
KOG1115		516	consensus Ceramide kinase [Lipid transport and met	99.78
KOG1169		634	consensus Diacylglycerol kinase [Lipid transport a	99.48
KOG4236		888	consensus Serine/threonine protein kinase PKC mu/P	99.46
KOG0694		694	consensus Serine/threonine protein kinase [Signal	99.45
KOG4435		535	consensus Predicted lipid kinase [Lipid transport	98.98
PF00130		53	C1_1: Phorbol esters/diacylglycerol binding domain	98.75
PRK03708		277	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.62
PF00130		53	C1_1: Phorbol esters/diacylglycerol binding domain	98.6
cd00029		50	C1 Protein kinase C conserved region 1 (C1) . Cyst	98.52
PRK02645		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.43
smart00109		49	C1 Protein kinase C conserved region 1 (C1) domain	98.41
cd00029		50	C1 Protein kinase C conserved region 1 (C1) . Cyst	98.36
PRK03378		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.34
smart00109		49	C1 Protein kinase C conserved region 1 (C1) domain	98.24
PRK14075		256	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	98.18
KOG0695		593	consensus Serine/threonine protein kinase [Signal	98.14
PRK01231		295	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.99
PRK02155		291	ppnK NAD(+)/NADH kinase family protein; Provisiona	97.62
PRK03372		306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.55
PRK14077		287	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	97.42
KOG0696		683	consensus Serine/threonine protein kinase [Signal	97.36
PRK03501		264	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.36
PRK01911		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.25
PF01513		285	NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me	97.25
PRK04539		296	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.16
COG3199		355	Predicted inorganic polyphosphate/ATP-NAD kinase [	97.16
PRK02649		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.15
PRK04885		265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.83
KOG4236		888	consensus Serine/threonine protein kinase PKC mu/P	96.61
PRK14076		569	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	96.49
PLN02935		508	Bifunctional NADH kinase/NAD(+) kinase	96.35
PRK00561		259	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.31
PRK01185		271	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.3
PLN02727		986	NAD kinase	95.73
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	95.53
KOG2996		865	consensus Rho guanine nucleotide exchange factor V	95.2
PRK02231		272	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	94.55
KOG0694		694	consensus Serine/threonine protein kinase [Signal	94.25
PRK04761		246	ppnK inorganic polyphosphate/ATP-NAD kinase; Revie	93.85
KOG0193		678	consensus Serine/threonine protein kinase RAF [Sig	93.67
KOG4239		348	consensus Ras GTPase effector RASSF2 [Signal trans	93.49
KOG1170		1099	consensus Diacylglycerol kinase [Lipid transport a	92.58
PF07649		30	C1_3: C1-like domain; InterPro: IPR011424 This sho	91.96
PF03107		30	C1_2: C1 domain; InterPro: IPR004146 This short do	91.58
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	91.43
KOG0695		593	consensus Serine/threonine protein kinase [Signal	91.2
PLN02929		301	NADH kinase	91.09
PF07649		30	C1_3: C1-like domain; InterPro: IPR011424 This sho	87.64
KOG0957		707	consensus PHD finger protein [General function pre	86.22
PF03107		30	C1_2: C1 domain; InterPro: IPR004146 This short do	85.75
COG0061		281	nadF NAD kinase [Coenzyme metabolism]	82.1
PF10254		414	Pacs-1: PACS-1 cytosolic sorting protein; InterPro	80.42

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=3.6e-102  Score=827.87  Aligned_cols=503  Identities=32%  Similarity=0.606  Sum_probs=434.6

Q ss_pred             CCCCeeEecccCCCCCccccc----cccccccccccCCCCCceeccccCcccCCCchhhhc---ccCcccccc-------
Q 005250           67 LSHHTWMEDFSNGEQPSTCCV----CLTSLVLPQSVGAHFPVHRCAVCGVAAHFFCSEFTA---KDCKCVAQA-------  132 (706)
Q Consensus        67 ~~~H~w~~~~~~~~~P~~C~v----C~~~i~g~~~lG~~~~~~~C~~C~~~vH~~C~~~~~---~~Ck~~~~~-------  132 (706)
                      .++|.|.+++.++   .+|.|    |.-.+.      ++..+.+|.+|+++||..|.....   ..||.+...       
T Consensus       167 ~gEHvWletnvsg---d~CYvGE~~C~~r~~------kS~~rRkCAaCkIVvHT~CieqLeKiNfrCKptFRe~gsr~~r  237 (1004)
T KOG0782|consen  167 DGEHVWLETNVSG---DECYVGEKDCRVRFA------KSGERRKCAACKIVVHTNCIEQLEKINFRCKPTFREYGSRKTR  237 (1004)
T ss_pred             CceeEEEecccCC---ceeeechHHHHHHHh------hhhhhccceeeeEEEechHHHHHHHhccccccchhhccccCcc
Confidence            5789999998764   58888    542221      224557999999999999997654   589986432       


Q ss_pred             cccccccceeeeeecCCCCCCCCCcccccCCCcCcCccCCC---CceeecccccccchhhhhhcccCCCCCCCCCCCCCc
Q 005250          133 CFSHVKHHWSERWVNMDDNAELSAFCFYCDEPCGVPFINDC---PTWHCLWCQRRIHVKCHAIMSKESGDVCDLGPHRRL  209 (706)
Q Consensus       133 ~~~~~~H~W~~~~~~~~~n~~~~~~C~~C~k~c~~~~~~g~---~~~~C~WC~~~vH~~C~~~~~~~~~~~CdlG~~~~~  209 (706)
                      ...-+.|||+++|       ...++|.+|+|.+.+.|.+.+   -++.|+||+..+|.+-.++|...+++.|.||.|+.+
T Consensus       238 E~~fvrHHWVHrr-------RqeGkC~~CgKgFQQKf~FhsKEivAisCSWCKqayH~KvtCFml~~iEEpCslGahaav  310 (1004)
T KOG0782|consen  238 ESGFVRHHWVHRR-------RQEGKCNTCGKGFQQKFFFHSKEIVAISCSWCKQAYHLKVTCFMLDKIEEPCSLGAHAAV  310 (1004)
T ss_pred             cccchHHhHhhHh-------hhccccchhhhhhhhheeeccccEEEEEehHHHHHhhcchhhhhhhhhhcccccccccee
Confidence            2246899999987       458899999999998886654   378999999999999999999999999999999999


Q ss_pred             eeCCCcccccccccccccccccccccccccccchhhhccccCCCCCCCccccccccccccccchhhcccccccccCCCcc
Q 005250          210 ILSPLCVKENEENIGGRMLSSIKEGIRASSVRGKIKRKRHQGKAGKSHSVNEKLQDTTSTNSALKYMFNGFVGLKSNNEK  289 (706)
Q Consensus       210 IlpP~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (706)
                      |+||+||..+.+++  +            ++..     ++|+|+                                    
T Consensus       311 ivPPTWIlr~~~pq--n------------slka-----skkkkR------------------------------------  335 (1004)
T KOG0782|consen  311 IVPPTWILRLANPQ--N------------SLKA-----SKKKKR------------------------------------  335 (1004)
T ss_pred             ecCchHheeecCcc--c------------hhhh-----hhhccc------------------------------------
Confidence            99999998775432  1            1111     122232                                    


Q ss_pred             ccccccccCccccCCCCcccccccCccccccccceeeeccCCC-CCCcEEEEEcCCcCCCChHHHHHHHHHhhCCCcEEE
Q 005250          290 NIECSKVDGSIHSNSTHNESIQKTGGTVICGQVKKYSLVDVPQ-DARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFE  368 (706)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~pllV~vNPkSG~~~g~~l~~~~~~lLnp~qV~d  368 (706)
                              .+|+|+++++...        .+.++.|.|.|+++ .|+|+|||||||||||+|.++++.|-|+|||+||||
T Consensus       336 --------tsfkRKasKkg~e--------e~k~rpFvikPtsSplmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFD  399 (1004)
T KOG0782|consen  336 --------TSFKRKASKKGHE--------ENKGRPFVIKPTSSPLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFD  399 (1004)
T ss_pred             --------Cchhhhhhhccch--------hccCCceEEccCCCCCCCceEEEecCCCCCcchHHHHHHHHHhcChhhhee
Confidence                    2367777776543        35678999999885 699999999999999999999999999999999999


Q ss_pred             EeccCChhHHHHHHHhCCCCeEEEEcCchhHHHHHHHHHhcCCCCCCCEEEeeCCCcchhhhhcccCCCcccCCCCCcHH
Q 005250          369 LSASQGPEVGLELFSNFQYFRVLVCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLS  448 (706)
Q Consensus       369 l~~t~~p~~al~l~~~~~~~~Ilv~GGDGTV~~VLn~L~~~~~~~~ppvgILPlGTGNDlAR~Lgwg~g~~~~~~~~~~~  448 (706)
                      |+. .||..|++|+|++.+.|||+|||||||+|||+.|+.+++.+.|||||||+||||||||+|+|||||++    +++.
T Consensus       400 lsq-~GPK~aLEmyRKV~nLRILaCGGDGTVGWiLStLD~L~l~p~PPvailPLGTGNDLARtlnWGGgytD----EPvS  474 (1004)
T KOG0782|consen  400 LSQ-LGPKFALEMYRKVVNLRILACGGDGTVGWILSTLDNLNLPPYPPVAILPLGTGNDLARTLNWGGGYTD----EPVS  474 (1004)
T ss_pred             hhc-cCcHHHHHHHHhccceEEEEecCCCceeehhhhhhhcCCCCCCCeeEeecCCcchHHHhcccCCCcCc----chHH
Confidence            995 79999999999999999999999999999999999999999999999999999999999999999985    6899


Q ss_pred             HHHHHHHHhhheeecceEEEEecccc------ccccc-ccccceEEEEeeccchhhhhhHhhhccccCccchhhhhhhhH
Q 005250          449 TILNDIEHAAVTMLDRWKVNIREENS------EYDQR-KEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFSSRFVNKL  521 (706)
Q Consensus       449 ~iL~~i~~a~~~~lDrw~v~i~~~~~------~~g~~-~~~~~~f~N~~siG~DA~Va~~f~~~Re~~p~kf~sr~~nkl  521 (706)
                      +||..|+++.++.||||.+.++.+..      ++|.. ..+..+|+||||+||||+|+++||+.||+||++|+|||.|||
T Consensus       475 kil~~ve~gtvVqLDRW~lhvEpNp~~~pEe~ddG~~~~LPL~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrNkm  554 (1004)
T KOG0782|consen  475 KILQAVEHGTVVQLDRWRLHVEPNPSCNPEEEDDGMQSALPLTVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKM  554 (1004)
T ss_pred             HHHHHHhcCcEEeeeeeeecccCCCCCChhhhcccchhccchhHhhccccccccceEEEEeccccccCHHHHHHHHhhhh
Confidence            99999999999999999999887641      11221 356679999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCceEEEEECCeEEEecC----ceeEEEEeccCccccCccccCCCCCCCCCCCccccCCCeEE
Q 005250          522 LYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPK----DSEGLIVLNIGSYMGGVDLWQNDSEHDDDFSPQSMHDKVLE  597 (706)
Q Consensus       522 ~Y~~~g~k~l~~~~~k~~~~~v~l~~Dg~~i~l~~----~~~~i~v~Ni~~~gGG~~l~~~~~~~~~~f~~~~~~DG~Le  597 (706)
                      .|.-.++.+++.++.+++..+|+|+|||.+++ |+    ++++|+++|||+|.+|..+|++..++ ..|.+|..+||.+|
T Consensus       555 fYaG~afsDfl~rSskDL~khi~vvCDG~DlT-PkIqeLK~qCivFlNIprYcaGTmPWG~pgdh-hDfePqrhdDGyvE  632 (1004)
T KOG0782|consen  555 FYAGLAFSDFLKRSSKDLCKHITVVCDGVDLT-PKIQELKLQCIVFLNIPRYCAGTMPWGEPGDH-HDFEPQRHDDGYVE  632 (1004)
T ss_pred             hhcchhHHHHHhhhhHHhhhheEEEecCccCC-hhhhhcccceEEEecchhhhcCccCCCCCCcc-ccCCccccCCceEE
Confidence            99999999999999999999999999999876 32    47899999999999999999997544 36899999999999


Q ss_pred             EEEEeCcccchhhhhcccCceEEEEecEEEEEeCCCccEEecCCCCCCceEEEEEEcCceEEEEeCCC
Q 005250          598 VVCVCGAWHLGKLQVGLSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAP  665 (706)
Q Consensus       598 Vv~v~~~~~l~~l~~g~~~~~rl~q~~~i~I~~~~~~pvqvDGE~~~~~P~~I~I~~~~~~~ml~~~~  665 (706)
                      |++++- ..|+.+|+|. ++.|++||++|.+.+.+.+||||||||+...|..|+|..++++.|+.+.+
T Consensus       633 ViGFTm-asLAALQvGG-hGERl~QCreV~l~T~KaIPmQVDGEPC~LAps~Iri~lrnqa~Mvqk~K  698 (1004)
T KOG0782|consen  633 VIGFTM-ASLAALQVGG-HGERLAQCREVRLITNKAIPMQVDGEPCLLAPSIIRIGLRNQAPMVQKEK  698 (1004)
T ss_pred             EEeeeH-HHHHHHhhcC-cchhhhhceeEEEEeccccceeecCcchhcchhheEEeecccchHHHHHh
Confidence            999985 5688899985 78999999999999999999999999999999999999999999997754

>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]	Back alignment and domain information

>PRK13057 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK11914 diacylglycerol kinase; Reviewed	Back alignment and domain information

>PRK13337 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13059 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13054 lipid kinase; Reviewed	Back alignment and domain information

>PRK13055 putative lipid kinase; Reviewed	Back alignment and domain information

>TIGR03702 lip_kinase_YegS lipid kinase YegS	Back alignment and domain information

>PRK00861 putative lipid kinase; Reviewed	Back alignment and domain information

>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>PRK12361 hypothetical protein; Provisional	Back alignment and domain information

>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase	Back alignment and domain information

>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases	Back alignment and domain information

>PLN02204 diacylglycerol kinase	Back alignment and domain information

>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed)	Back alignment and domain information

>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]	Back alignment and domain information

>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger	Back alignment and domain information

>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger	Back alignment and domain information

>cd00029 C1 Protein kinase C conserved region 1 (C1)	Back alignment and domain information

>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)	Back alignment and domain information

>cd00029 C1 Protein kinase C conserved region 1 (C1)	Back alignment and domain information

>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)	Back alignment and domain information

>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional	Back alignment and domain information

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2	Back alignment and domain information

>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	Back alignment and domain information

>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02935 Bifunctional NADH kinase/NAD(+) kinase	Back alignment and domain information

>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02727 NAD kinase	Back alignment and domain information

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]	Back alignment and domain information

>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed	Back alignment and domain information

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]	Back alignment and domain information

>KOG4239 consensus Ras GTPase effector RASSF2 [Signal transduction mechanisms]	Back alignment and domain information

>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]	Back alignment and domain information

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines	Back alignment and domain information

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines	Back alignment and domain information

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PLN02929 NADH kinase	Back alignment and domain information

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines	Back alignment and domain information

>KOG0957 consensus PHD finger protein [General function prediction only]	Back alignment and domain information

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines	Back alignment and domain information

>COG0061 nadF NAD kinase [Coenzyme metabolism]	Back alignment and domain information

>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		706
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	6e-24
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	6e-23
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	3e-22
1r79_A		84	Diacylglycerol kinase, delta; C1 domain, cystein-r	3e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
2kwj_A		114	Zinc finger protein DPF3; acetyl-lysine, transcrip	1e-04
3v43_A		112	Histone acetyltransferase KAT6A; MOZ, PHD finger,	7e-04

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332	Back alignment and structure

 Score =  102 bits (256), Expect = 6e-24
 Identities = 54/324 (16%), Positives = 95/324 (29%), Gaps = 72/324 (22%)

Query: 335 RPLLVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLELFSNF---QYFRVL 391
              L+ +N KS       LR  + +L        +  +                    V+
Sbjct: 30  PASLLILNGKSTD--NLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVI 87

Query: 392 VCGGDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTIL 451
             GGDGT+  V  A+ +   +  P + +LPLGT ND +  +             G+    
Sbjct: 88  AGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSV-------------GIPE-- 132

Query: 452 NDIEHAA-------VTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHV 504
             ++ A           +D  +VN         Q        +N    G   ++  E   
Sbjct: 133 -ALDKALKLAIAGDAIAIDMAQVN--------KQT-----CFINMATGGFGTRITTET-- 176

Query: 505 TRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVL 564
                P+K  +     + Y   G   +        P +  +  +    +   D+  + + 
Sbjct: 177 -----PEKLKAAL-GSVSYIIHGLMRMDTLQ----PDRCEIRGENFHWQG--DALVIGIG 224

Query: 565 NIGSYMGGVDLWQNDSEHDDDFSPQ-SMHDKVLEVVCVCGAWHLGKLQVGLSQAR----- 618
           N     GG  L            P   ++D +L++    G   L  L   L         
Sbjct: 225 NGRQAGGGQQL-----------CPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNI 273

Query: 619 RLAQGKVIRIHSSSPFPVQIDGEP 642
                    I +       +DGEP
Sbjct: 274 IEGASSWFDIQAPHDITFNLDGEP 297

PyMOL of 2bon

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304	Back alignment and structure

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337	Back alignment and structure

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1 Length = 84	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114	Back alignment and structure

>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		706
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	100.0
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	100.0
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	100.0
3pfq_A		674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.78
1r79_A		84	Diacylglycerol kinase, delta; C1 domain, cystein-r	99.69
2an1_A		292	Putative kinase; structural genomics, PSI, protein	99.41
1yt5_A		258	Inorganic polyphosphate/ATP-NAD kinase; domain 1:	99.35
1u0t_A		307	Inorganic polyphosphate/ATP-NAD kinase; alpha-beta	99.25
2i2c_A		272	Probable inorganic polyphosphate/ATP-NAD kinase 1;	99.15
2enn_A		77	NPKC-theta, protein kinase C theta type; zinc bind	99.13
2yuu_A		83	NPKC-delta, protein kinase C delta type; metal bin	98.98
2enz_A		65	NPKC-theta, protein kinase C theta type; zinc bind	98.94
1ptq_A		50	Protein kinase C delta type; phosphotransferase; 1	98.9
1y8f_A		66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	98.88
3uej_A		65	NPKC-delta, protein kinase C delta type; proteine	98.85
2db6_A		74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	98.85
2eli_A		85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	98.84
1faq_A		52	RAF-1; transferase, serine/threonine-protein kinas	98.82
2row_A		84	RHO-associated protein kinase 2; ATP-binding, coil	98.69
2fnf_X		72	Putative RAS effector NORE1; zinc, signal transduc	98.62
1rfh_A		59	RAS association (ralgds/AF-6) domain family 5; zin	98.57
3ky9_A		587	Proto-oncogene VAV; calponin homology domain, DBL	98.49
4b6d_A		61	RAC GTPase-activating protein 1; signaling protein	98.37
2enz_A		65	NPKC-theta, protein kinase C theta type; zinc bind	98.28
2vrw_B		406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	98.26
1ptq_A		50	Protein kinase C delta type; phosphotransferase; 1	98.14
1y8f_A		66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	98.04
2eli_A		85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	98.02
2enn_A		77	NPKC-theta, protein kinase C theta type; zinc bind	97.94
3uej_A		65	NPKC-delta, protein kinase C delta type; proteine	97.93
2yuu_A		83	NPKC-delta, protein kinase C delta type; metal bin	97.92
2row_A		84	RHO-associated protein kinase 2; ATP-binding, coil	97.91
1faq_A		52	RAF-1; transferase, serine/threonine-protein kinas	97.9
1kbe_A		49	Kinase suppressor of RAS; KSR, cysteine-rich domai	97.86
2fnf_X		72	Putative RAS effector NORE1; zinc, signal transduc	97.85
1rfh_A		59	RAS association (ralgds/AF-6) domain family 5; zin	97.82
2db6_A		74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	97.8
1kbe_A		49	Kinase suppressor of RAS; KSR, cysteine-rich domai	97.73
1r79_A		84	Diacylglycerol kinase, delta; C1 domain, cystein-r	97.71
4b6d_A		61	RAC GTPase-activating protein 1; signaling protein	97.65
3cxl_A		463	N-chimerin; SH2, RHO-GAP, structural genomics cons	97.52
3pfq_A		674	PKC-B, PKC-beta, protein kinase C beta type; phosp	97.42
3afo_A		388	NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi	97.03
2vrw_B		406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	96.24
3cxl_A		463	N-chimerin; SH2, RHO-GAP, structural genomics cons	95.99
1z0s_A		278	Probable inorganic polyphosphate/ATP-NAD kinase; A	95.82
3ky9_A		587	Proto-oncogene VAV; calponin homology domain, DBL	95.77
1v5n_A		89	PDI-like hypothetical protein AT1G60420; DC1 domai	86.0
2kwj_A		114	Zinc finger protein DPF3; acetyl-lysine, transcrip	85.89

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A	Back alignment and structure

Probab=100.00  E-value=9e-45  Score=386.47  Aligned_cols=283  Identities=20%  Similarity=0.219  Sum_probs=220.2

Q ss_pred             CCCcEEEEEcCCcCCCChHHHHHHHHHhhCCCcE-EEEeccCChhHHHHHHHhC--CCCeEEEEcCchhHHHHHHHHHhc
Q 005250          333 DARPLLVFINAKSGGQLGHYLRRRLNMLLNPAQV-FELSASQGPEVGLELFSNF--QYFRVLVCGGDGTVAWVLNAIEKR  409 (706)
Q Consensus       333 ~~~pllV~vNPkSG~~~g~~l~~~~~~lLnp~qV-~dl~~t~~p~~al~l~~~~--~~~~Ilv~GGDGTV~~VLn~L~~~  409 (706)
                      .|++++||+||+||++++.+++++++.+|...++ +++..|+.++++.++++++  ..+.|+++||||||++|+|+|...
T Consensus         7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl~~v~~~l~~~   86 (304)
T 3s40_A            7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGLAPL   86 (304)
T ss_dssp             SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred             CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhcCCCEEEEEccchHHHHHHHHHhhC
Confidence            4789999999999999998999999999987664 6777788999999988875  457899999999999999999864


Q ss_pred             CCCCCCCEEEeeCCCcchhhhhcccCCCcccCCCCCcHHHHHHHHHHhhheeecceEEEEecccccccccccccceEEEE
Q 005250          410 NFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNY  489 (706)
Q Consensus       410 ~~~~~ppvgILPlGTGNDlAR~Lgwg~g~~~~~~~~~~~~iL~~i~~a~~~~lDrw~v~i~~~~~~~g~~~~~~~~f~N~  489 (706)
                      .  ..+|||+||+||||||||+||++.         ++.++++.+.++....+|.+++              +.++|+|+
T Consensus        87 ~--~~~~l~iiP~Gt~N~~ar~lg~~~---------~~~~a~~~i~~g~~~~iDlg~v--------------~~~~F~~~  141 (304)
T 3s40_A           87 E--IRPTLAIIPGGTCNDFSRTLGVPQ---------NIAEAAKLITKEHVKPVDVAKA--------------NGQHFLNF  141 (304)
T ss_dssp             S--SCCEEEEEECSSCCHHHHHTTCCS---------SHHHHHHHHTTCCEEEEEEEEE--------------TTEEESSE
T ss_pred             C--CCCcEEEecCCcHHHHHHHcCCCc---------cHHHHHHHHHhCCeEEEEEEEE--------------CCEEEEEE
Confidence            2  468999999999999999999852         5777888888888888887755              45799999


Q ss_pred             eeccchhhhhhHhhhccccCccchhhhhhhhHHHHHHHHHHHHHhhhcCCCceEEEEECCeEEEecCceeEEEEeccCcc
Q 005250          490 LGIGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSY  569 (706)
Q Consensus       490 ~siG~DA~Va~~f~~~Re~~p~kf~sr~~nkl~Y~~~g~k~l~~~~~k~~~~~v~l~~Dg~~i~l~~~~~~i~v~Ni~~~  569 (706)
                      +|+|+||+|+.+++..+        ++.+|+++|++++++.++.    ..+++++|++||+.++.  ++..++|+|.++|
T Consensus       142 ~~~G~da~v~~~~~~~~--------k~~~G~~~Y~~~~l~~l~~----~~~~~~~i~~dg~~~~~--~~~~v~v~N~~~~  207 (304)
T 3s40_A          142 WGIGLVSEVSNNIDAEE--------KAKLGKIGYYLSTIRTVKN----AETFPVKITYDGQVYED--EAVLVMVGNGEYL  207 (304)
T ss_dssp             EEEC--------------------------CHHHHTTTC----------CCEEEEEEETTEEEEE--EEEEEEEECSSEE
T ss_pred             EeehHHHHHHHhcCHHH--------hhcCCchHHHHHHHHHHhh----cCCceEEEEECCEEEEe--EEEEEEEECCCcC
Confidence            99999999999876321        4568999999999998874    46789999999998763  6889999999999


Q ss_pred             ccCccccCCCCCCCCCCCccccCCCeEEEEEEeCccc--chhhhh------cccCceEEEEecEEEEEeCCCccEEecCC
Q 005250          570 MGGVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWH--LGKLQV------GLSQARRLAQGKVIRIHSSSPFPVQIDGE  641 (706)
Q Consensus       570 gGG~~l~~~~~~~~~~f~~~~~~DG~LeVv~v~~~~~--l~~l~~------g~~~~~rl~q~~~i~I~~~~~~pvqvDGE  641 (706)
                      |||+.++|.+          +++||+|||+.+.....  +..+..      ...+.+++.++++++|++.+++++|+|||
T Consensus       208 Ggg~~~~p~a----------~~~DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~~~~~~~~DGE  277 (304)
T 3s40_A          208 GGIPSFIPNV----------KCDDGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGE  277 (304)
T ss_dssp             TTEECSSTTC----------CTTSSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEESSCCEEEEC--
T ss_pred             CCCcccCCCC----------cCCCCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeCCCcEEEeCCC
Confidence            9999999876          58999999999987532  111111      12457899999999999999999999999


Q ss_pred             CCCCceEEEEEEcCceEEEEeCC
Q 005250          642 PFIQQAGCLDITHHGQVFTLRRA  664 (706)
Q Consensus       642 ~~~~~P~~I~I~~~~~~~ml~~~  664 (706)
                      ++...|++|++.|+++.+++|+.
T Consensus       278 ~~~~~p~~i~v~p~al~v~~p~~  300 (304)
T 3s40_A          278 SSLHTPCQIELLQGHFTMIYNPA  300 (304)
T ss_dssp             CCEESSEEEEEEEEEEEEECCTT
T ss_pred             CCCCceEEEEEECCeEEEEechh
Confidence            99999999999999999999864

PyMOL of 3s40

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A	Back alignment and structure

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A	Back alignment and structure

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A	Back alignment and structure

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1	Back alignment and structure

>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}	Back alignment and structure

>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}	Back alignment and structure

>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A	Back alignment and structure

>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*	Back alignment and structure

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}	Back alignment and structure

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}	Back alignment and structure

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*	Back alignment and structure

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}	Back alignment and structure

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*	Back alignment and structure

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A	Back alignment and structure

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}	Back alignment and structure

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}	Back alignment and structure

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}	Back alignment and structure

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A	Back alignment and structure

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}	Back alignment and structure

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}	Back alignment and structure

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A	Back alignment and structure

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*	Back alignment and structure

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}	Back alignment and structure

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}	Back alignment and structure

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*	Back alignment and structure

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}	Back alignment and structure

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A	Back alignment and structure

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A	Back alignment and structure

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}	Back alignment and structure

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}	Back alignment and structure

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A	Back alignment and structure

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1	Back alignment and structure

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}	Back alignment and structure

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A	Back alignment and structure

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A	Back alignment and structure

>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}	Back alignment and structure

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A	Back alignment and structure

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A	Back alignment and structure

>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*	Back alignment and structure

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A	Back alignment and structure

>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3	Back alignment and structure

>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		706
d2bona1		295	e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia	3e-18
d2qv7a1		312	e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta	3e-16
d1r79a_		84	g.49.1.1 (A:) Diacylglycerol kinase delta {Human (	1e-06

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295	Back information, alignment and structure


class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]

 Score = 83.9 bits (206), Expect = 3e-18
 Identities = 52/339 (15%), Positives = 91/339 (26%), Gaps = 58/339 (17%)

Query: 338 LVFINAKSGGQLGHYLRRRLNMLLNPAQVFELSASQGPEVGLEL---FSNFQYFRVLVCG 394
           L+ +N KS       LR  + +L        +  +               F    V+  G
Sbjct: 4   LLILNGKSTD--NLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGG 61

Query: 395 GDGTVAWVLNAIEKRNFESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDI 454
           GDGT+  V  A+ +   +  P + +LPLGT ND +  +                      
Sbjct: 62  GDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKL---------- 111

Query: 455 EHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLGIGCDAKVAYEFHVTRQENPQKFS 514
                        +    +        +    +N    G   ++  E             
Sbjct: 112 ---------AIAGDAIAIDMAQVN---KQTCFINMATGGFGTRITTETP----------- 148

Query: 515 SRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMGGVD 574
              +   L +       + R     P +  +  +    +   D+  + + N     GG  
Sbjct: 149 -EKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQ--GDALVIGIGNGRQAGGGQQ 205

Query: 575 LWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVGLSQARRL-----AQGKVIRIH 629
           L  N            ++D +L++    G   L  L   L                  I 
Sbjct: 206 LCPN----------ALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQ 255

Query: 630 SSSPFPVQIDGEPFIQQAGCLDITHHGQVFTLRRAPEEP 668
           +       +DGEP   Q     I         R  P+ P
Sbjct: 256 APHDITFNLDGEPLSGQN--FHIEILPAALRCRLPPDCP 292

PyMOL of d2bona1

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312	Back information, alignment and structure

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		706
d2bona1		295	Lipid kinase YegS {Escherichia coli [TaxId: 562]}	100.0
d2qv7a1		312	Diacylglycerol kinase DgkB {Staphylococcus aureus	100.0
d1r79a_		84	Diacylglycerol kinase delta {Human (Homo sapiens)	99.2
d1ptqa_		50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	98.86
d1tbna_		66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	98.86
d1xa6a3		62	Beta-chimaerin, middle domain {Human (Homo sapiens	98.81
d1r79a_		84	Diacylglycerol kinase delta {Human (Homo sapiens)	98.63
d1faqa_		52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1kbea_		49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	98.4
d1ptqa_		50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	98.28
d1tbna_		66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	98.24
d1faqa_		52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1xa6a3		62	Beta-chimaerin, middle domain {Human (Homo sapiens	97.93
d1kbea_		49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	97.56
d1u0ta_		302	Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob	97.41
d1z0sa1		249	Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa	93.51
d1v5na_		89	Pdi-like hypothetical protein At1g60420 {Thale cre	87.44
d1v5na_		89	Pdi-like hypothetical protein At1g60420 {Thale cre	84.56

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.5e-43  Score=366.99  Aligned_cols=281  Identities=20%  Similarity=0.182  Sum_probs=228.9

Q ss_pred             cEEEEEcCCcCCCChHHHHHHHHHhhCCCcE-EEEeccCChhHHHHHHHhC---CCCeEEEEcCchhHHHHHHHHHhcCC
Q 005250          336 PLLVFINAKSGGQLGHYLRRRLNMLLNPAQV-FELSASQGPEVGLELFSNF---QYFRVLVCGGDGTVAWVLNAIEKRNF  411 (706)
Q Consensus       336 pllV~vNPkSG~~~g~~l~~~~~~lLnp~qV-~dl~~t~~p~~al~l~~~~---~~~~Ilv~GGDGTV~~VLn~L~~~~~  411 (706)
                      +.+||+||+||++.   .++++..+|...++ +++..|+.+++|.++++++   .++.|+|+||||||++|+|+|.+.+.
T Consensus         2 ~~l~i~N~~s~~~~---~~~~~~~~l~~~g~~~~v~~T~~~g~a~~~~~~~~~~~~d~Ivv~GGDGTv~ev~~gl~~~~~   78 (295)
T d2bona1           2 ASLLILNGKSTDNL---PLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEG   78 (295)
T ss_dssp             CEEEEECSSSTTCH---HHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCCCCch---HHHHHHHHHHHCCCEEEEEEcCCcchHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHhccC
Confidence            57899999999864   34567777777765 7777788999999999886   57899999999999999999998765


Q ss_pred             CCCCCEEEeeCCCcchhhhhcccCCCcccCCCCCcHHHHHHHHHHhhheeecceEEEEecccccccccccccceEEEEee
Q 005250          412 ESPPPVAVLPLGTGNDMSRVLQWGRGFSMVDGHGGLSTILNDIEHAAVTMLDRWKVNIREENSEYDQRKEQSKFMLNYLG  491 (706)
Q Consensus       412 ~~~ppvgILPlGTGNDlAR~Lgwg~g~~~~~~~~~~~~iL~~i~~a~~~~lDrw~v~i~~~~~~~g~~~~~~~~f~N~~s  491 (706)
                      ...|+|||||+||||||||+||++         .++.+++..+.++....+|.+.+.             ..++|.|++|
T Consensus        79 ~~~p~lgilP~GTgN~~Ar~lg~~---------~~~~~a~~~i~~g~~~~id~~~v~-------------~~~~f~~~~~  136 (295)
T d2bona1          79 DDIPALGILPLGTANDFATSVGIP---------EALDKALKLAIAGDAIAIDMAQVN-------------KQTCFINMAT  136 (295)
T ss_dssp             SCCCEEEEEECSSSCHHHHHTTCC---------SSHHHHHHHHHHSEEEEEEEEEET-------------TSCEESSEEE
T ss_pred             CCCceEEEEECCcccchHHHcCCC---------cchhhhhhhhcccceEEeeeeeee-------------cceeeeeeee
Confidence            456889999999999999999985         267888999999988888877551             2458999999


Q ss_pred             ccchhhhhhHhhhccccCccchhhhhhhhHHHHHHHHHHHHHhhhcCCCceEEEEECCeEEEecCceeEEEEeccCcccc
Q 005250          492 IGCDAKVAYEFHVTRQENPQKFSSRFVNKLLYAKEGARDIVDRTCAELPWQVWLEVDGKGIEIPKDSEGLIVLNIGSYMG  571 (706)
Q Consensus       492 iG~DA~Va~~f~~~Re~~p~kf~sr~~nkl~Y~~~g~k~l~~~~~k~~~~~v~l~~Dg~~i~l~~~~~~i~v~Ni~~~gG  571 (706)
                      +|+||.++.+++..+        ++.+|++.|...+++.++    ...+++++++.||+.++.  +...++++|.++|||
T Consensus       137 ~G~~a~v~~~~~~~~--------~~~~G~~~y~~~~~~~l~----~~~~~~~~i~~d~~~~~~--~~~~~~v~n~~~~g~  202 (295)
T d2bona1         137 GGFGTRITTETPEKL--------KAALGSVSYIIHGLMRMD----TLQPDRCEIRGENFHWQG--DALVIGIGNGRQAGG  202 (295)
T ss_dssp             EEEEEEC------------------CCHHHHHHHHHTSCEE----EEECEEEEEEETTEEEEE--EESEEEEESSSCBTT
T ss_pred             ecccHHHHHHHHHHh--------hccccchhhhhhhhhhhh----ccCceeEEEEeccccccc--ceeEEEecccccccC
Confidence            999999998765321        456899999998877764    356889999999998874  578899999999999


Q ss_pred             CccccCCCCCCCCCCCccccCCCeEEEEEEeCcccchhhhhc-----ccCceEEEEecEEEEEeCCCccEEecCCCCCCc
Q 005250          572 GVDLWQNDSEHDDDFSPQSMHDKVLEVVCVCGAWHLGKLQVG-----LSQARRLAQGKVIRIHSSSPFPVQIDGEPFIQQ  646 (706)
Q Consensus       572 G~~l~~~~~~~~~~f~~~~~~DG~LeVv~v~~~~~l~~l~~g-----~~~~~rl~q~~~i~I~~~~~~pvqvDGE~~~~~  646 (706)
                      |+.++|.+          +++||.|+|+.+.....+..+...     ..+.+...++++++|+.++++++|+|||++...
T Consensus       203 g~~i~P~a----------~~~dg~l~v~~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~v~I~~~~~~~~~iDGE~~~~~  272 (295)
T d2bona1         203 GQQLCPNA----------LINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQ  272 (295)
T ss_dssp             TBCSCTTC----------CTTSSCEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEEEEEEEEETTEEEEEE
T ss_pred             CcccCCCC----------CCCCCceEEEEEcchHHHHHHHHHhcccCCCCCEEEEEeEEEEEEeCCCCEEEecCCCCCCC
Confidence            99999886          478999999999876555444321     234678899999999999899999999999999


Q ss_pred             eEEEEEEcCceEEEEeCCC
Q 005250          647 AGCLDITHHGQVFTLRRAP  665 (706)
Q Consensus       647 P~~I~I~~~~~~~ml~~~~  665 (706)
                      |++|++.|+++.+++|...
T Consensus       273 p~~i~v~P~aL~vlvP~~~  291 (295)
T d2bona1         273 NFHIEILPAALRCRLPPDC  291 (295)
T ss_dssp             EEEEEEEEEEEEEEECTTC
T ss_pred             ceEEEEECCEEEEECCCCC
Confidence            9999999999999999754

PyMOL of d2bona1

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}	Back information, alignment and structure

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}	Back information, alignment and structure

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure