Citrus Sinensis ID: 005260
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 705 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M1S8 | 705 | Probable glutamate carbox | no | no | 0.948 | 0.948 | 0.410 | 1e-148 | |
| P70627 | 752 | Glutamate carboxypeptidas | yes | no | 0.902 | 0.845 | 0.36 | 1e-114 | |
| Q9CZR2 | 740 | N-acetylated-alpha-linked | yes | no | 0.893 | 0.851 | 0.343 | 1e-113 | |
| O35409 | 752 | Glutamate carboxypeptidas | no | no | 0.920 | 0.863 | 0.351 | 1e-112 | |
| Q9Y3Q0 | 740 | N-acetylated-alpha-linked | yes | no | 0.880 | 0.839 | 0.355 | 1e-112 | |
| Q04609 | 750 | Glutamate carboxypeptidas | no | no | 0.889 | 0.836 | 0.343 | 1e-111 | |
| O77564 | 751 | Glutamate carboxypeptidas | no | no | 0.903 | 0.848 | 0.351 | 1e-110 | |
| O54697 | 745 | N-acetylated-alpha-linked | no | no | 0.913 | 0.864 | 0.343 | 1e-98 | |
| Q5WN23 | 770 | Glutamate carboxypeptidas | N/A | no | 0.920 | 0.842 | 0.346 | 3e-98 | |
| Q7M758 | 745 | N-acetylated-alpha-linked | no | no | 0.917 | 0.868 | 0.352 | 3e-96 |
| >sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2 OS=Arabidopsis thaliana GN=AMP1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/713 (41%), Positives = 413/713 (57%), Gaps = 44/713 (6%)
Query: 2 FKTAITCFLAIATSFSFLLSSPQPKSFYHSLYTSTSL-------SDNVSISHHLHTLTRR 54
F I F+A + + P F + Y + L + N +IS +L LTR
Sbjct: 28 FLFVIVLFVATFYTLHHPDAVTPPLLFSRNAYNALRLRRLFLSSASNATISSYLRELTRH 87
Query: 55 PHVAGSEANAEAAAYVLSVFTSCSLESHIASYGVSLTYPVSRSLSLTRPPPQPPITFALR 114
PH+AG++ + + YV + F S LE+H+A Y L+YP S++ + T
Sbjct: 88 PHLAGTKPSLDTLHYVFNHFQSLGLETHVAEYEALLSYPTHISVTASF---SNTTTLEFD 144
Query: 115 QEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVL 174
GD V+ +H Y+ SG+ G VV+VN+G DY L+ + V+V G VVL
Sbjct: 145 LNDVPGD------SPVVRPYHAYSPSGSAQGNVVFVNHGEERDYHALESIGVSVKGCVVL 198
Query: 175 ARYGQ-IFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVY 233
AR G+ + RG IV A GA G LI+ + + G++ G+V
Sbjct: 199 ARKGENLGRGAIVKIAEAKGALGVLIYAE----------------NDGGGFGGIERGTVM 242
Query: 234 DGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANEDW 293
G GDP +PGWP G E+LS ++ P IPSLP+S ++ E I+ S+GG A +W
Sbjct: 243 RGIGDPVSPGWPGVVGGEKLSLDDELVTRRFPKIPSLPLSLRNAEIILASLGGARAPLEW 302
Query: 294 QGD-KDAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTF 352
+ + P RVGPG V+N+++ GE M I NV+ I G+EE DR VILGNHRDAWT+
Sbjct: 303 RNSGRVGPGQRVGPGRMVINMTFQGEMKMKKINNVVVTIRGSEEADRYVILGNHRDAWTY 362
Query: 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLA 412
GAVDPNSGT+ALL++++R L K GW+PRRTI+LC+WDAEE+G+IGSTEW+EEN L
Sbjct: 363 GAVDPNSGTSALLDISRRFALLLKSGWRPRRTILLCSWDAEEFGMIGSTEWIEENVLNLG 422
Query: 413 SRAVAYLNIDSAVHEAGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI 472
+ AVAYLN+D AV +GF A ATPQLD LL K VQDPD T+ +++ +N +I
Sbjct: 423 ASAVAYLNVDCAVQGSGFFAGATPQLDGLLVDVLKLVQDPDAVGLTVEETFKSQNN--II 480
Query: 473 GRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASM 532
RL SD++ F+ H G+P DM +G YPVYH+ +D + WM DP F RHVA A +
Sbjct: 481 QRLSRVDSDFSGFLHHAGIPSIDMYYGADYPVYHTAFDSYDWMIHNADPLFHRHVAMAGI 540
Query: 533 WGLVALQLADEEFLPFNYLSYAFELQKSTKDLENEVSGKGISLIPLFKSIEELAKAAAKI 592
WGL+ + LADE +PF+Y+SYA +LQ L + GK +S+ PL +I+E + A +
Sbjct: 541 WGLLGILLADEPLIPFDYISYADQLQAHRDKLSKLLEGK-VSVNPLSMAIQEFSLVAKEA 599
Query: 593 DNEKKELQKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKH 652
+E K+L K K ++ K RELNDRLM+ ER F D +G+ G+ W+KHL+Y P+
Sbjct: 600 ADEAKKL-KGKSYSKNDVAAAAKRRELNDRLMLVERGFLDAEGIKGKEWFKHLVYGPAAE 658
Query: 653 NDYGSKYFPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKLT 705
+ +FP I DAI +N ++ ++HE+WRV+RA++ AS L G T
Sbjct: 659 PESKLGFFPGIADAI----AMNASEG--IIEHEIWRVARAIQRASKALKGGFT 705
|
May modulate the level of one or more small signaling molecules that have a role in regulating meristem function. May play a role in balancing and restricting the meristem-promoting activity of auxin signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 7EC: .EC: 2EC: 1 |
| >sp|P70627|FOLH1_RAT Glutamate carboxypeptidase 2 OS=Rattus norvegicus GN=Folh1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9CZR2|NALD2_MOUSE N-acetylated-alpha-linked acidic dipeptidase 2 OS=Mus musculus GN=Naalad2 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|O35409|FOLH1_MOUSE Glutamate carboxypeptidase 2 OS=Mus musculus GN=Folh1 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q9Y3Q0|NALD2_HUMAN N-acetylated-alpha-linked acidic dipeptidase 2 OS=Homo sapiens GN=NAALAD2 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q04609|FOLH1_HUMAN Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FOLH1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O77564|FOLH1_PIG Glutamate carboxypeptidase 2 OS=Sus scrofa GN=FOLH1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O54697|NALDL_RAT N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Rattus norvegicus GN=Naaladl1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q5WN23|GCP2_CAEBR Glutamate carboxypeptidase 2 homolog OS=Caenorhabditis briggsae GN=CBG08178 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q7M758|NALDL_MOUSE N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Mus musculus GN=Naaladl1 PE=2 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 705 | ||||||
| 359484534 | 704 | PREDICTED: probable glutamate carboxypep | 0.997 | 0.998 | 0.767 | 0.0 | |
| 224091363 | 709 | predicted protein [Populus trichocarpa] | 0.998 | 0.992 | 0.756 | 0.0 | |
| 359484536 | 689 | PREDICTED: probable glutamate carboxypep | 0.967 | 0.989 | 0.735 | 0.0 | |
| 356497577 | 693 | PREDICTED: probable glutamate carboxypep | 0.961 | 0.978 | 0.717 | 0.0 | |
| 42567964 | 681 | Peptidase M28 family protein [Arabidopsi | 0.927 | 0.960 | 0.694 | 0.0 | |
| 297808041 | 682 | peptidase M28 family protein [Arabidopsi | 0.961 | 0.994 | 0.681 | 0.0 | |
| 255546299 | 648 | dipeptidase, putative [Ricinus communis] | 0.907 | 0.987 | 0.657 | 0.0 | |
| 242054387 | 726 | hypothetical protein SORBIDRAFT_03g03426 | 0.974 | 0.946 | 0.624 | 0.0 | |
| 413952467 | 725 | hypothetical protein ZEAMMB73_052433 [Ze | 0.971 | 0.944 | 0.619 | 0.0 | |
| 115439875 | 728 | Os01g0743300 [Oryza sativa Japonica Grou | 0.974 | 0.943 | 0.607 | 0.0 |
| >gi|359484534|ref|XP_002283565.2| PREDICTED: probable glutamate carboxypeptidase 2-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/706 (76%), Positives = 612/706 (86%), Gaps = 3/706 (0%)
Query: 1 MFKTAITCFLAIATSFSFLLSSPQPKSFYHSLYTSTSLSDNVSISHHLHTLTRRPHVAGS 60
MFK +I AIATS FLL S PK +HSLY S+SLSDN SISHHL+TLTRRPH+AGS
Sbjct: 1 MFKVSICT--AIATSLFFLLFSSPPKPSHHSLYISSSLSDNASISHHLYTLTRRPHIAGS 58
Query: 61 EANAEAAAYVLSVFTSCSLESHIASYGVSLTYPVSRSLSLTRPPPQPPITFALRQEIYEG 120
+ANA+AAAYVLS +S +++SHI SY V+LTYPVSRSL+L RP P+P TF LRQEIY+G
Sbjct: 59 KANADAAAYVLSTLSSYAIKSHIVSYDVALTYPVSRSLTLIRPSPEPSTTFDLRQEIYDG 118
Query: 121 DPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQI 180
DPYADVA EV+PTFH YAKSGTV GPVVYVNYGRVEDY LKEM V+V GTVVLARYG+I
Sbjct: 119 DPYADVASEVVPTFHAYAKSGTVAGPVVYVNYGRVEDYEVLKEMGVSVEGTVVLARYGKI 178
Query: 181 FRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPT 240
FRGDIV NAF AGA GA+++TDRKDYGGG DARWFPDDKWMPPSGVQVGS+ GDPT
Sbjct: 179 FRGDIVQNAFAAGAIGAVVYTDRKDYGGGGGDARWFPDDKWMPPSGVQVGSLLTVDGDPT 238
Query: 241 TPGWPSS-EGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDA 299
TPGW S+ + CERLS+EEVE G V +IPSLPISA DGE IMR+IGG+VAN+DWQG DA
Sbjct: 239 TPGWASTRDECERLSEEEVENGGGVGMIPSLPISAADGEAIMRTIGGQVANDDWQGSTDA 298
Query: 300 PIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNS 359
P+YRVGPGP ++NLSYTGE + TIQNV G+I GTEEPDR V+LGNHRDAWTFGAVDPNS
Sbjct: 299 PVYRVGPGPAILNLSYTGEQKITTIQNVFGVIEGTEEPDRFVLLGNHRDAWTFGAVDPNS 358
Query: 360 GTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYL 419
GTA LLEVAQRL KLQKRGW+PRRTIVLCNWDAEEYGL GSTEWVEENREMLAS+A+AYL
Sbjct: 359 GTATLLEVAQRLRKLQKRGWRPRRTIVLCNWDAEEYGLTGSTEWVEENREMLASKAIAYL 418
Query: 420 NIDSAVHEAGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGG 479
N+DSAV AGF+ASATPQLDELLKQA +QVQDPDNSSQ+IY+SW GSSNSP+IGRLGGGG
Sbjct: 419 NVDSAVSGAGFYASATPQLDELLKQATQQVQDPDNSSQSIYESWVGSSNSPIIGRLGGGG 478
Query: 480 SDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539
SD+AAF+QH+GVP D+SFG GYPVYHSMYDDFIWM+KFGDP F RH AAAS+WGLVAL+
Sbjct: 479 SDFAAFVQHVGVPATDISFGAGYPVYHSMYDDFIWMKKFGDPMFHRHAAAASIWGLVALR 538
Query: 540 LADEEFLPFNYLSYAFELQKSTKDLENEVSGKGISLIPLFKSIEELAKAAAKIDNEKKEL 599
LADEEFLPF+YLSYA+ELQKS K+LE E+S KGI+LIPLFKSIE+ +AA KI++++KE+
Sbjct: 539 LADEEFLPFDYLSYAYELQKSAKELEGEISNKGINLIPLFKSIEKFKRAATKINHQRKEI 598
Query: 600 QKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKHNDYGSKY 659
++ KGWAS WKK+ KVRELNDRLMMAERAFTDRDGL GRPWYKHLIY P KH+DYGSK
Sbjct: 599 EENKGWASIWKKEHLKVRELNDRLMMAERAFTDRDGLLGRPWYKHLIYGPLKHDDYGSKS 658
Query: 660 FPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKLT 705
FP IDDAIE+A +T KSW VQHEVWRVSRAV ASLVLNG+LT
Sbjct: 659 FPGIDDAIEKAKSQSTEKSWSLVQHEVWRVSRAVIDASLVLNGELT 704
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091363|ref|XP_002309233.1| predicted protein [Populus trichocarpa] gi|222855209|gb|EEE92756.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359484536|ref|XP_003633117.1| PREDICTED: probable glutamate carboxypeptidase 2-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356497577|ref|XP_003517636.1| PREDICTED: probable glutamate carboxypeptidase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|42567964|ref|NP_197475.2| Peptidase M28 family protein [Arabidopsis thaliana] gi|30725320|gb|AAP37682.1| At5g19740 [Arabidopsis thaliana] gi|332005361|gb|AED92744.1| Peptidase M28 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297808041|ref|XP_002871904.1| peptidase M28 family protein [Arabidopsis lyrata subsp. lyrata] gi|297317741|gb|EFH48163.1| peptidase M28 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|255546299|ref|XP_002514209.1| dipeptidase, putative [Ricinus communis] gi|223546665|gb|EEF48163.1| dipeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|242054387|ref|XP_002456339.1| hypothetical protein SORBIDRAFT_03g034260 [Sorghum bicolor] gi|241928314|gb|EES01459.1| hypothetical protein SORBIDRAFT_03g034260 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|413952467|gb|AFW85116.1| hypothetical protein ZEAMMB73_052433 [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|115439875|ref|NP_001044217.1| Os01g0743300 [Oryza sativa Japonica Group] gi|57899971|dbj|BAD87907.1| putative glutamate carboxypeptidase [Oryza sativa Japonica Group] gi|113533748|dbj|BAF06131.1| Os01g0743300 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 705 | ||||||
| TAIR|locus:2183229 | 681 | AT5G19740 [Arabidopsis thalian | 0.960 | 0.994 | 0.676 | 3.7e-254 | |
| TAIR|locus:2102470 | 705 | AMP1 "ALTERED MERISTEM PROGRAM | 0.780 | 0.780 | 0.456 | 5.9e-128 | |
| UNIPROTKB|E1C7K7 | 740 | NAALAD2 "Uncharacterized prote | 0.906 | 0.863 | 0.367 | 1.1e-105 | |
| UNIPROTKB|F1MGS8 | 740 | NAALAD2 "Uncharacterized prote | 0.902 | 0.859 | 0.355 | 3.7e-103 | |
| RGD|70963 | 752 | Folh1 "folate hydrolase 1" [Ra | 0.914 | 0.857 | 0.350 | 1.3e-102 | |
| UNIPROTKB|F1PV60 | 694 | FOLH1 "Uncharacterized protein | 0.896 | 0.910 | 0.352 | 2e-102 | |
| MGI|MGI:1858193 | 752 | Folh1 "folate hydrolase 1" [Mu | 0.934 | 0.876 | 0.348 | 2.6e-102 | |
| UNIPROTKB|I3LTL9 | 751 | FOLH1 "Glutamate carboxypeptid | 0.892 | 0.837 | 0.353 | 3.3e-102 | |
| MGI|MGI:1919810 | 740 | Naalad2 "N-acetylated alpha-li | 0.977 | 0.931 | 0.334 | 3.3e-102 | |
| UNIPROTKB|Q9Y3Q0 | 740 | NAALAD2 "N-acetylated-alpha-li | 0.895 | 0.852 | 0.350 | 6.9e-102 |
| TAIR|locus:2183229 AT5G19740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2447 (866.4 bits), Expect = 3.7e-254, P = 3.7e-254
Identities = 478/707 (67%), Positives = 557/707 (78%)
Query: 1 MFKTAITCFLAIATSFSF--LLSSPQPKSFYHSLYTSTSLSDNVSISHHLHTLTRRPHVX 58
M K+ F+ A S+SF L SSP PKS YH L+ STS SDN S++ +LHTLTRRPHV
Sbjct: 1 MSKSKSLAFVIAALSYSFFSLFSSP-PKSHYHELFISTSFSDNASVALNLHTLTRRPHVA 59
Query: 59 XXXXXXXXXXYVLSVFTSCSLESHIASYGVSLTYPVSRSLSLTRPPPQPPITFALRQEIY 118
YV SVFTS +L+SH+ +Y VSLTYPV RSL LT PITF L QE
Sbjct: 60 GTVANAEAAEYVRSVFTSSALKSHVVAYQVSLTYPVHRSLVLTPTDSAKPITFLLEQEKL 119
Query: 119 EGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARY 177
+PYA+ EV+PTFHGYAKSG V GPVVY NYGRVED+V LK +M VNV+G VV+ARY
Sbjct: 120 GDNPYAN---EVMPTFHGYAKSGNVSGPVVYANYGRVEDFVRLKKDMGVNVSGAVVIARY 176
Query: 178 GQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTG 237
GQI+RGDIV NA+EAGA G +I+TD++DYGG D+ WFP KWMPPSGVQVG+VY+G G
Sbjct: 177 GQIYRGDIVKNAYEAGAVGVVIYTDKRDYGG--DE--WFPASKWMPPSGVQVGTVYNGLG 232
Query: 238 DPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDK 297
DPTTPGW S +GCERLS E VE +G+VPLIPSLP+SA D E I++++ G+V++ GD
Sbjct: 233 DPTTPGWASVDGCERLSDEAVELSGDVPLIPSLPVSAADAEVILKTVVGDVSD----GD- 287
Query: 298 DAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDP 357
+Y VGPGPGV+NLSY GE V+A I+NVIG+I G EEPDR VILGNHRDAWTFGAVDP
Sbjct: 288 ---VYPVGPGPGVLNLSYIGETVIAKIENVIGVIEGEEEPDRYVILGNHRDAWTFGAVDP 344
Query: 358 NSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVA 417
NSGTA L+E+AQRL+KLQKRGWKPRRTI+LCNWDAEEYGLIGSTEWVEENREML+SRAVA
Sbjct: 345 NSGTAVLMEIAQRLDKLQKRGWKPRRTIILCNWDAEEYGLIGSTEWVEENREMLSSRAVA 404
Query: 418 YLNIDSAVHEAGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGG 477
YLN+D AV GFHASATPQLDEL+K AA++V+DPDN++QTIY+SW GSS+S VI RLGG
Sbjct: 405 YLNVDCAVSGPGFHASATPQLDELIKVAAQEVRDPDNATQTIYESWIGSSDSVVIRRLGG 464
Query: 478 GGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVA 537
GGSDYA+F+QH+GVP DMSFG GYPVYHSMYDDF WMEKFGDP FQRHVA AS+ GLVA
Sbjct: 465 GGSDYASFVQHVGVPGVDMSFGRGYPVYHSMYDDFTWMEKFGDPMFQRHVAMASVLGLVA 524
Query: 538 LQLADEEFLPFNYLSYAFELQKSTKDLENEVSGKGISLIPLFKSIEELAKAAAKIDNEKK 597
L+LADEE +PFNY SYA EL+KS +DLENE G I + L KSIE+L+ AA I EK+
Sbjct: 525 LRLADEEIIPFNYTSYALELKKSAEDLENEKLGHNIDVSTLIKSIEDLSTAAKHISLEKE 584
Query: 598 ELQKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKHNDYGS 657
++ A KVRELNDRLMMAERA TDRDGLS RPWYKHLIY PSK++DYGS
Sbjct: 585 AIKGA-----------LKVRELNDRLMMAERALTDRDGLSERPWYKHLIYGPSKYDDYGS 633
Query: 658 KYFPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 704
K FP +DDAI+ A KLNT SW VQH++WRVSRA+RHASLVL G+L
Sbjct: 634 KSFPGVDDAIDNAKKLNTKASWENVQHQIWRVSRAIRHASLVLKGEL 680
|
|
| TAIR|locus:2102470 AMP1 "ALTERED MERISTEM PROGRAM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C7K7 NAALAD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MGS8 NAALAD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|70963 Folh1 "folate hydrolase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PV60 FOLH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1858193 Folh1 "folate hydrolase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LTL9 FOLH1 "Glutamate carboxypeptidase 2" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1919810 Naalad2 "N-acetylated alpha-linked acidic dipeptidase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y3Q0 NAALAD2 "N-acetylated-alpha-linked acidic dipeptidase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9Y3Q0 | NALD2_HUMAN | 3, ., 4, ., 1, 7, ., 2, 1 | 0.3551 | 0.8808 | 0.8391 | yes | no |
| P70627 | FOLH1_RAT | 3, ., 4, ., 1, 7, ., 2, 1 | 0.36 | 0.9021 | 0.8457 | yes | no |
| Q9CZR2 | NALD2_MOUSE | 3, ., 4, ., 1, 7, ., 2, 1 | 0.3431 | 0.8936 | 0.8513 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.17 | 0.766 |
| 3rd Layer | 3.4.17.21 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 705 | |||
| cd08022 | 286 | cd08022, M28_PSMA_like, M28 Zn-peptidase prostate- | 1e-127 | |
| cd03874 | 279 | cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Trans | 8e-82 | |
| cd02121 | 220 | cd02121, PA_GCPII_like, PA_GCPII_like: Protease-as | 3e-72 | |
| cd09848 | 285 | cd09848, M28_TfR, M28 Zn-peptidase Transferrin Rec | 5e-40 | |
| cd02690 | 252 | cd02690, M28, M28 Zn-peptidases include aminopepti | 2e-30 | |
| cd02128 | 183 | cd02128, PA_TfR, PA_TfR: Protease-associated domai | 2e-29 | |
| pfam04253 | 122 | pfam04253, TFR_dimer, Transferrin receptor-like di | 2e-24 | |
| cd05663 | 260 | cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptid | 4e-22 | |
| pfam04389 | 173 | pfam04389, Peptidase_M28, Peptidase family M28 | 2e-21 | |
| cd03877 | 254 | cd03877, M28_like_PA, M28 Zn-Peptidases containing | 2e-20 | |
| cd08015 | 275 | cd08015, M28_like_4, M28 Zn-Peptidases | 2e-17 | |
| cd03883 | 276 | cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma gl | 7e-16 | |
| cd05660 | 306 | cd05660, M28_like_PA_1, M28 Zn-Peptidases containi | 2e-15 | |
| cd05662 | 267 | cd05662, M28_like_2, M28 Zn-Peptidases | 9e-12 | |
| cd03876 | 288 | cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomy | 2e-11 | |
| COG2234 | 435 | COG2234, Iap, Predicted aminopeptidases [General f | 1e-10 | |
| cd03875 | 307 | cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasm | 2e-10 | |
| cd08021 | 277 | cd08021, M28_like_5, M28 Zn-Peptidase IAP aminopep | 1e-08 | |
| cd05642 | 348 | cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas | 1e-08 | |
| pfam02225 | 96 | pfam02225, PA, PA domain | 2e-08 | |
| cd03879 | 285 | cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibr | 2e-08 | |
| cd05661 | 305 | cd05661, M28_like_PA_2, M28 Zn-Peptidases containi | 2e-08 | |
| cd03873 | 237 | cd03873, Zinc_peptidase_like, Zinc peptidases M18, | 4e-08 | |
| cd00538 | 126 | cd00538, PA, PA: Protease-associated (PA) domain | 5e-08 | |
| cd08022 | 286 | cd08022, M28_PSMA_like, M28 Zn-peptidase prostate- | 4e-07 | |
| cd05640 | 279 | cd05640, M28_like_1, M28 Zn-Peptidases | 3e-06 | |
| cd02131 | 153 | cd02131, PA_hNAALADL2_like, PA_hNAALADL2_like: Pro | 2e-05 | |
| cd02133 | 143 | cd02133, PA_C5a_like, PA_C5a_like: Protease-associ | 5e-05 | |
| cd03881 | 308 | cd03881, M28_Nicastrin, M28 Zn-Peptidase Nicastrin | 1e-04 | |
| PRK12893 | 412 | PRK12893, PRK12893, allantoate amidohydrolase; Rev | 5e-04 | |
| cd03884 | 399 | cd03884, M20_bAS, M20 Peptidase beta-alanine synth | 6e-04 | |
| PRK12890 | 414 | PRK12890, PRK12890, allantoate amidohydrolase; Rev | 9e-04 | |
| pfam05450 | 227 | pfam05450, Nicastrin, Nicastrin | 0.003 |
| >gnl|CDD|193568 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane antigen | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-127
Identities = 140/231 (60%), Positives = 164/231 (70%), Gaps = 6/231 (2%)
Query: 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382
I NVIG I G+EEPD VILGNHRDAW FGA DPNSGTA LLEVA+ L L K+GWKPR
Sbjct: 57 PIYNVIGTIRGSEEPDEYVILGNHRDAWVFGAGDPNSGTAVLLEVARALGTLLKKGWKPR 116
Query: 383 RTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAGFHASATPQLDELL 442
RTI+ +WDAEEYGLIGSTEWVEEN L RAVAYLN+D AV + ASA+P L +L+
Sbjct: 117 RTIIFASWDAEEYGLIGSTEWVEENAPWLKERAVAYLNVDVAVSGSTLRASASPLLHKLI 176
Query: 443 KQAAKQVQDPDNSSQTIYD-SWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTG 501
++AAK+V DPD + Y S P IG L G GSDY F+QH+G+P D+ +G G
Sbjct: 177 REAAKKVPDPDKGGSSQYLYDSWEKSTDPRIGNL-GSGSDYTVFLQHLGIPSLDLGYGGG 235
Query: 502 ----YPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPF 548
YPVYHS YD F WME FGDP F+ H+A A +WGL+AL+LAD E LPF
Sbjct: 236 PTDPYPVYHSNYDSFYWMENFGDPGFKYHLAMAKLWGLLALRLADSEVLPF 286
|
Peptidase M28 family; prostate-specific membrane antigen (PSMA, also called glutamate carboxypeptidase II or GCP-II)-like subfamily. PSMA is a homodimeric type II transmembrane protein containing three distinct domains: protease-like, apical or protease-associated (PA) and helical domains. The protease-like domain is a large extracellular portion (ectodomain). PSMA is over-expressed predominantly in prostate cancer (PCa) as well as neovasculature of most solid tumors, but not in the vasculature of the normal tissues. PSMA is considered a biomarker for PCa and possibly for use as an imaging and therapeutic target. The extracellular domain of PSMA possesses two unique enzymatic functions: N-acetylated, alpha-linked acidic dipeptidase (NAALADase) which cleaves terminal glutamate from the neurodipeptide N-acetyl-aspartyl-glutamate (NAAG), and folate hydrolase (FOLH) which cleaves the terminal glutamates from gamma-linked polyglutamates (carboxypeptidase). A mutation in this gene may be associated with impaired intestinal absorption of dietary folates, resulting in low blood folate levels and consequent hyperhomocysteinemia. Expression of this protein in the brain may be involved in a number of pathological conditions associated with glutamate excitotoxicity. This gene likely arose from a duplication event of a nearby chromosomal region. Alternative splicing gives rise to multiple transcript variants. Length = 286 |
| >gnl|CDD|193496 cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Transferrin Receptor-like family | Back alignment and domain information |
|---|
| >gnl|CDD|239036 cd02121, PA_GCPII_like, PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like | Back alignment and domain information |
|---|
| >gnl|CDD|193572 cd09848, M28_TfR, M28 Zn-peptidase Transferrin Receptor family | Back alignment and domain information |
|---|
| >gnl|CDD|193493 cd02690, M28, M28 Zn-peptidases include aminopeptidases and carboxypeptidases | Back alignment and domain information |
|---|
| >gnl|CDD|239043 cd02128, PA_TfR, PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) | Back alignment and domain information |
|---|
| >gnl|CDD|202944 pfam04253, TFR_dimer, Transferrin receptor-like dimerisation domain | Back alignment and domain information |
|---|
| >gnl|CDD|193539 cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptidases containing a PA domain insert and associated with a PDZ domain | Back alignment and domain information |
|---|
| >gnl|CDD|218057 pfam04389, Peptidase_M28, Peptidase family M28 | Back alignment and domain information |
|---|
| >gnl|CDD|193499 cd03877, M28_like_PA, M28 Zn-Peptidases containing a PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193563 cd08015, M28_like_4, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|193504 cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase | Back alignment and domain information |
|---|
| >gnl|CDD|193536 cd05660, M28_like_PA_1, M28 Zn-Peptidases containing a PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193538 cd05662, M28_like_2, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|193498 cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus Aminopeptidase and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|225143 COG2234, Iap, Predicted aminopeptidases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|193497 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|193567 cd08021, M28_like_5, M28 Zn-Peptidase IAP aminopeptidase may contain PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193520 cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase (AAP)-like | Back alignment and domain information |
|---|
| >gnl|CDD|216938 pfam02225, PA, PA domain | Back alignment and domain information |
|---|
| >gnl|CDD|193500 cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase | Back alignment and domain information |
|---|
| >gnl|CDD|193537 cd05661, M28_like_PA_2, M28 Zn-Peptidases containing a PA domain insert | Back alignment and domain information |
|---|
| >gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 | Back alignment and domain information |
|---|
| >gnl|CDD|238300 cd00538, PA, PA: Protease-associated (PA) domain | Back alignment and domain information |
|---|
| >gnl|CDD|193568 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane antigen | Back alignment and domain information |
|---|
| >gnl|CDD|193519 cd05640, M28_like_1, M28 Zn-Peptidases | Back alignment and domain information |
|---|
| >gnl|CDD|239046 cd02131, PA_hNAALADL2_like, PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) | Back alignment and domain information |
|---|
| >gnl|CDD|239048 cd02133, PA_C5a_like, PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase | Back alignment and domain information |
|---|
| >gnl|CDD|193502 cd03881, M28_Nicastrin, M28 Zn-Peptidase Nicastrin, a main component of gamma-secretase complex | Back alignment and domain information |
|---|
| >gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|237248 PRK12890, PRK12890, allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|218594 pfam05450, Nicastrin, Nicastrin | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 705 | |||
| KOG2195 | 702 | consensus Transferrin receptor and related protein | 100.0 | |
| cd02121 | 220 | PA_GCPII_like PA_GCPII_like: Protease-associated d | 100.0 | |
| cd02128 | 183 | PA_TfR PA_TfR: Protease-associated domain containi | 100.0 | |
| cd02131 | 153 | PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso | 100.0 | |
| PF04389 | 179 | Peptidase_M28: Peptidase family M28; InterPro: IPR | 99.95 | |
| PF04253 | 125 | TFR_dimer: Transferrin receptor-like dimerisation | 99.94 | |
| COG4882 | 486 | Predicted aminopeptidase, Iap family [General func | 99.94 | |
| PRK10199 | 346 | alkaline phosphatase isozyme conversion aminopepti | 99.92 | |
| KOG2194 | 834 | consensus Aminopeptidases of the M20 family [Postt | 99.82 | |
| COG2234 | 435 | Iap Predicted aminopeptidases [General function pr | 99.76 | |
| cd04819 | 127 | PA_2 PA_2: Protease-associated (PA) domain subgrou | 99.56 | |
| PF09940 | 386 | DUF2172: Domain of unknown function (DUF2172); Int | 99.55 | |
| PF05450 | 234 | Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri | 99.48 | |
| KOG3946 | 338 | consensus Glutaminyl cyclase [Posttranslational mo | 99.42 | |
| cd04820 | 137 | PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do | 99.36 | |
| cd04816 | 122 | PA_SaNapH_like PA_SaNapH_like: Protease-associated | 99.32 | |
| cd02130 | 122 | PA_ScAPY_like PA_ScAPY_like: Protease-associated d | 99.26 | |
| cd04822 | 151 | PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do | 99.25 | |
| cd04817 | 139 | PA_VapT_like PA_VapT_like: Protease-associated dom | 99.24 | |
| cd02133 | 143 | PA_C5a_like PA_C5a_like: Protease-associated domai | 99.14 | |
| cd04814 | 142 | PA_M28_1 PA_M28_1: Protease-associated (PA) domain | 99.13 | |
| cd04815 | 134 | PA_M28_2 PA_M28_2: Protease-associated (PA) domain | 99.09 | |
| PF02225 | 101 | PA: PA domain; InterPro: IPR003137 The PA (Proteas | 99.02 | |
| KOG2526 | 555 | consensus Predicted aminopeptidases - M20/M25/M40 | 98.98 | |
| cd04821 | 157 | PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) do | 98.91 | |
| cd00538 | 126 | PA PA: Protease-associated (PA) domain. The PA dom | 98.9 | |
| TIGR03176 | 406 | AllC allantoate amidohydrolase. This enzyme cataly | 98.78 | |
| COG4310 | 435 | Uncharacterized protein conserved in bacteria with | 98.77 | |
| cd02129 | 120 | PA_hSPPL_like PA_hSPPL_like: Protease-associated d | 98.73 | |
| cd02126 | 126 | PA_EDEM3_like PA_EDEM3_like: protease associated d | 98.7 | |
| TIGR01879 | 401 | hydantase amidase, hydantoinase/carbamoylase famil | 98.63 | |
| cd02132 | 139 | PA_GO-like PA_GO-like: Protease-associated domain | 98.6 | |
| PRK13799 | 591 | unknown domain/N-carbamoyl-L-amino acid hydrolase | 98.59 | |
| PRK13590 | 591 | putative bifunctional OHCU decarboxylase/allantoat | 98.55 | |
| cd02123 | 153 | PA_C_RZF_like PA_C-RZF_ like: Protease-associated | 98.47 | |
| cd02122 | 138 | PA_GRAIL_like PA _GRAIL_like: Protease-associated | 98.42 | |
| PF01546 | 189 | Peptidase_M20: Peptidase family M20/M25/M40 This f | 98.41 | |
| cd02127 | 118 | PA_hPAP21_like PA_hPAP21_like: Protease-associated | 98.39 | |
| PRK12890 | 414 | allantoate amidohydrolase; Reviewed | 98.35 | |
| cd02125 | 127 | PA_VSR PA_VSR: Protease-associated (PA) domain-con | 98.34 | |
| PRK12891 | 414 | allantoate amidohydrolase; Reviewed | 98.29 | |
| cd04813 | 117 | PA_1 PA_1: Protease-associated (PA) domain subgrou | 98.28 | |
| cd04818 | 118 | PA_subtilisin_1 PA_subtilisin_1: Protease-associat | 98.17 | |
| KOG2657 | 596 | consensus Transmembrane glycoprotein nicastrin [Si | 98.12 | |
| PRK12893 | 412 | allantoate amidohydrolase; Reviewed | 98.1 | |
| PRK09961 | 344 | exoaminopeptidase; Provisional | 98.08 | |
| PRK09290 | 413 | allantoate amidohydrolase; Reviewed | 98.08 | |
| PRK12892 | 412 | allantoate amidohydrolase; Reviewed | 98.04 | |
| COG1363 | 355 | FrvX Cellulase M and related proteins [Carbohydrat | 98.04 | |
| cd02120 | 126 | PA_subtilisin_like PA_subtilisin_like: Protease-as | 98.03 | |
| PRK07906 | 426 | hypothetical protein; Provisional | 98.0 | |
| PF05343 | 292 | Peptidase_M42: M42 glutamyl aminopeptidase; InterP | 97.96 | |
| PRK09133 | 472 | hypothetical protein; Provisional | 97.95 | |
| PRK06133 | 410 | glutamate carboxypeptidase; Reviewed | 97.92 | |
| cd02124 | 129 | PA_PoS1_like PA_PoS1_like: Protease-associated (PA | 97.88 | |
| TIGR01910 | 375 | DapE-ArgE acetylornithine deacetylase or succinyl- | 97.86 | |
| TIGR01883 | 361 | PepT-like peptidase T-like protein. This model rep | 97.84 | |
| PRK08596 | 421 | acetylornithine deacetylase; Validated | 97.74 | |
| TIGR03107 | 350 | glu_aminopep glutamyl aminopeptidase. This model r | 97.68 | |
| TIGR01882 | 410 | peptidase-T peptidase T. This model represents a t | 97.66 | |
| PRK13381 | 404 | peptidase T; Provisional | 97.66 | |
| TIGR01893 | 477 | aa-his-dipept aminoacyl-histidine dipeptidase. | 97.65 | |
| PRK07907 | 449 | hypothetical protein; Provisional | 97.63 | |
| PRK13983 | 400 | diaminopimelate aminotransferase; Provisional | 97.62 | |
| TIGR01892 | 364 | AcOrn-deacetyl acetylornithine deacetylase (ArgE). | 97.61 | |
| PRK06837 | 427 | acetylornithine deacetylase; Provisional | 97.6 | |
| PRK09104 | 464 | hypothetical protein; Validated | 97.6 | |
| PRK08588 | 377 | succinyl-diaminopimelate desuccinylase; Reviewed | 97.56 | |
| KOG2275 | 420 | consensus Aminoacylase ACY1 and related metalloexo | 97.55 | |
| PRK07473 | 376 | carboxypeptidase; Provisional | 97.51 | |
| PRK08262 | 486 | hypothetical protein; Provisional | 97.51 | |
| PRK13013 | 427 | succinyl-diaminopimelate desuccinylase; Reviewed | 97.46 | |
| PRK07338 | 402 | hypothetical protein; Provisional | 97.4 | |
| PRK05469 | 408 | peptidase T; Provisional | 97.4 | |
| PRK07079 | 469 | hypothetical protein; Provisional | 97.38 | |
| PRK08201 | 456 | hypothetical protein; Provisional | 97.37 | |
| PRK06915 | 422 | acetylornithine deacetylase; Validated | 97.37 | |
| PRK06446 | 436 | hypothetical protein; Provisional | 97.36 | |
| PRK13009 | 375 | succinyl-diaminopimelate desuccinylase; Reviewed | 97.31 | |
| PRK07522 | 385 | acetylornithine deacetylase; Provisional | 97.31 | |
| TIGR01880 | 400 | Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | 97.29 | |
| PRK09864 | 356 | putative peptidase; Provisional | 97.26 | |
| PRK04443 | 348 | acetyl-lysine deacetylase; Provisional | 97.18 | |
| PRK05111 | 383 | acetylornithine deacetylase; Provisional | 97.09 | |
| PRK08652 | 347 | acetylornithine deacetylase; Provisional | 97.09 | |
| PRK07318 | 466 | dipeptidase PepV; Reviewed | 97.08 | |
| PRK08554 | 438 | peptidase; Reviewed | 97.05 | |
| TIGR01886 | 466 | dipeptidase dipeptidase PepV. This model represent | 97.04 | |
| PRK13007 | 352 | succinyl-diaminopimelate desuccinylase; Reviewed | 97.02 | |
| PRK06156 | 520 | hypothetical protein; Provisional | 96.97 | |
| PRK13004 | 399 | peptidase; Reviewed | 96.96 | |
| COG0624 | 409 | ArgE Acetylornithine deacetylase/Succinyl-diaminop | 96.91 | |
| PRK07205 | 444 | hypothetical protein; Provisional | 96.83 | |
| TIGR01900 | 373 | dapE-gram_pos succinyl-diaminopimelate desuccinyla | 96.81 | |
| TIGR01902 | 336 | dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d | 96.78 | |
| PRK08651 | 394 | succinyl-diaminopimelate desuccinylase; Reviewed | 96.77 | |
| TIGR01887 | 447 | dipeptidaselike dipeptidase, putative. This model | 96.62 | |
| TIGR01891 | 363 | amidohydrolases amidohydrolase. This model represe | 96.61 | |
| TIGR03106 | 343 | trio_M42_hydro hydrolase, peptidase M42 family. Th | 96.49 | |
| PRK10199 | 346 | alkaline phosphatase isozyme conversion aminopepti | 96.43 | |
| PRK00466 | 346 | acetyl-lysine deacetylase; Validated | 96.37 | |
| PRK15026 | 485 | aminoacyl-histidine dipeptidase; Provisional | 96.35 | |
| TIGR01246 | 370 | dapE_proteo succinyl-diaminopimelate desuccinylase | 96.3 | |
| PLN02693 | 437 | IAA-amino acid hydrolase | 96.25 | |
| COG4187 | 553 | RocB Arginine degradation protein (predicted deacy | 95.96 | |
| PLN02280 | 478 | IAA-amino acid hydrolase | 95.96 | |
| PRK02256 | 462 | putative aminopeptidase 1; Provisional | 95.7 | |
| TIGR03526 | 395 | selenium_YgeY putative selenium metabolism hydrola | 95.69 | |
| KOG2442 | 541 | consensus Uncharacterized conserved protein, conta | 95.44 | |
| PRK08737 | 364 | acetylornithine deacetylase; Provisional | 95.3 | |
| TIGR03320 | 395 | ygeY M20/DapE family protein YgeY. Members of this | 95.18 | |
| PTZ00371 | 465 | aspartyl aminopeptidase; Provisional | 94.37 | |
| PRK02813 | 428 | putative aminopeptidase 2; Provisional | 93.72 | |
| PF04114 | 504 | Gaa1: Gaa1-like, GPI transamidase component ; Inte | 91.35 | |
| KOG3920 | 193 | consensus Uncharacterized conserved protein, conta | 89.81 | |
| KOG2276 | 473 | consensus Metalloexopeptidases [Amino acid transpo | 88.66 | |
| PRK07338 | 402 | hypothetical protein; Provisional | 88.55 | |
| KOG4628 | 348 | consensus Predicted E3 ubiquitin ligase [Posttrans | 88.2 | |
| COG1473 | 392 | AbgB Metal-dependent amidase/aminoacylase/carboxyp | 84.18 | |
| KOG3946 | 338 | consensus Glutaminyl cyclase [Posttranslational mo | 83.68 |
| >KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-101 Score=879.51 Aligned_cols=637 Identities=42% Similarity=0.727 Sum_probs=545.2
Q ss_pred HHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeEEEEEEeeeCcc---ceEEecCCC
Q 005260 30 HSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPVSR---SLSLTRPPP 105 (705)
Q Consensus 30 ~~~~~~~~~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~-~~~~~y~v~~~~P~~~---~l~l~~~~g 105 (705)
...++. ....+++...++.++..+|++||..+.++++++..+|.+.|++ .+.-.|.+.++||... ...+...++
T Consensus 46 ~~l~~~--~~~~~ni~~~l~~~~~~~~~a~t~~~~~~a~~i~~~~~~~g~~s~~~~~y~v~l~~p~~~~~~~~~~~~e~~ 123 (702)
T KOG2195|consen 46 LELAQG--ELYASNISKNLNAFTLRPHLAGTEQDLRAAEIILSQYLEAGLRSSSLLAYDVLLSYPEYENPSSVLIKLEKD 123 (702)
T ss_pred HHHhhh--hccccchhhccchhhhhhhhhcchhhHHHHHHHHHHhhhhccccccccceeehhccccccCCccceeccccc
Confidence 444555 6777789999999999999999999999999999999999998 4889999999999532 222222234
Q ss_pred CCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCcchhH
Q 005260 106 QPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDI 185 (705)
Q Consensus 106 ~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvl~~~g~~~~~~k 185 (705)
...+.....+..+.+++ ...+.+.+|.+||+.|.++|++||+|||+.+||+.|+..|++++|||+|+|++.+++|.|
T Consensus 124 ~~i~~s~~~~~~~~Gd~---~~~~~~~~~~~~s~~g~~~~~~Vy~N~~~~~d~~~l~~~~i~~~g~i~l~r~~~i~~g~~ 200 (702)
T KOG2195|consen 124 LEIFSSMPHELQVDGDE---ALPDIVEPFRAYSPSGSVTGELVYANYGRIEDFYKLEDLGINLSGKIVLARVGKIYRGKK 200 (702)
T ss_pred ceeeccchhcccCCCcc---cCccccCchhccCcCCCccceEEEEecCchhhhhHhhcCcccccCceEEEEccccchhhh
Confidence 44555566666665554 245678889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCC-CCCCCceeeeee--cCCCCCCCCCCCCCCcccccchHHHhhcC
Q 005260 186 VHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKW-MPPSGVQVGSVY--DGTGDPTTPGWPSSEGCERLSKEEVEKAG 262 (705)
Q Consensus 186 ~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~-~p~~~v~rg~v~--~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~ 262 (705)
+++|+.+||.|||+|+||.+++..... ++||.++| +|+..+++|.|. .+.|||+||+||+.....+.++ +....+
T Consensus 201 ~~na~~~~a~gviiy~d~~d~~~~~~~-~~~p~~~~~~p~~~v~~g~v~~~~~~gdp~tpg~pa~~~~~~~~~-~~~~~~ 278 (702)
T KOG2195|consen 201 VKNAEAAGADGVIIYTDPYDYGSDEVL-EVYPKGIWFMPEPGVERGKVYNSNGVGDPLTPGYPAVDIYSRHSP-DAKFSG 278 (702)
T ss_pred HhhHHHhhcCcEEEeeccccccccccc-cccCcccccCCccceecceecccCCCCCCCCCCccCccccccCCh-hhhhcC
Confidence 999999999999999999988765433 79999999 899999999995 6789999999999988887774 222225
Q ss_pred CCCCCCcccCCHHHHHHHHHHcCCCCCCccccCCCCCCccccCCCCe-EEE-EEEeeeeeeeeeeeEEEEecCCCCCCcE
Q 005260 263 NVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPG-VVN-LSYTGEYVMATIQNVIGIIPGTEEPDRL 340 (705)
Q Consensus 263 ~~p~IP~~~is~~~a~~Ll~~l~~~~~~~~w~~~l~~~~y~~gp~~~-~v~-l~~~~~~~~~~~~NVia~i~G~~~p~~~ 340 (705)
.+|+||++|||+++++.|++.++|...+. +.+ +++|++||+.. ... +.+....+.+.+.||||+|+|+.+||++
T Consensus 279 ~~P~Ip~~Pis~~~ae~l~~~~~g~~~~~---~~~-~~~~~~gpg~~~~~~~~~~~~~~~~~ki~NIig~I~Gs~epD~~ 354 (702)
T KOG2195|consen 279 GLPKIPSLPISAEDAEILLRLLGGGVKPD---GLL-GVSYRVGPGSTGDKDLVVVQNTREETKIQNIIGKIEGSEEPDRY 354 (702)
T ss_pred CCCCCCCcCccchhHHHHHHHhCCCcccc---ccc-CccccccccccccccceeccceeeeeeeeeEEEEEecCcCCCeE
Confidence 69999999999999999999988766555 333 38999999753 111 2222578899999999999999999999
Q ss_pred EEEeeccCCcCCCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEE
Q 005260 341 VILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLN 420 (705)
Q Consensus 341 ViigaH~Ds~~~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iN 420 (705)
||||||+|||.+||.|++||+|+|+|++|.|..+++.||||+|||+||+|+|||+|++||++|+|++...|..++++|||
T Consensus 355 ViigahrDSw~~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEfGliGStE~~E~~~~~L~~~av~yin 434 (702)
T KOG2195|consen 355 VIIGAHRDSWTFGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEFGLLGSTEWAEEYLKNLKSRAVVYIN 434 (702)
T ss_pred EEEeccccccccCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhccccccHHHHHHHHHHhhheeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccC-CccccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeC
Q 005260 421 IDSAVHE-AGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG 499 (705)
Q Consensus 421 lD~~g~g-~~l~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~ 499 (705)
+|+++.| ..|.+.++|.|.+++.++++.+.+|....++. .+..+| ++|||.+|.+++|||++++.|+
T Consensus 435 ~d~~~~~~~~l~~~~~PlL~~li~~~~k~~~~p~~~~~~~-----------~v~~~g-~~Sd~~~F~~~~GIpsv~~~f~ 502 (702)
T KOG2195|consen 435 VDNAVLGDYTLHVKTTPLLTDLIEEAAKSVLSPDKGDQSN-----------RVLSLG-GGSDYASFLQFAGIPSVDFAFN 502 (702)
T ss_pred ccccccCCceeEEecCccHHHHHHHHHhccCCCCccccce-----------eEeccC-CCCcchhhccccCcceeeeeec
Confidence 9999999 89999999999999999999998887633322 245566 9999999999999999999999
Q ss_pred CCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCCCChhhHHHHHHHHHHHHHHhhhcCC-------
Q 005260 500 TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSYAFELQKSTKDLENEVSGKG------- 572 (705)
Q Consensus 500 ~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y~~~l~~~~~~l~~~~~~~~------- 572 (705)
..||+|||.+||++|++++.||.|..|.+++.+++..++.+++++++|||+.+|++.+.+++..+++...+..
T Consensus 503 ~~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~d~llPfd~~~Y~~~l~~~~~~l~~~~~~~~~~~~~~~ 582 (702)
T KOG2195|consen 503 RTYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILADDPLLPFDISDYADVLLKTLPKLEELSPDKVNFLLTIQ 582 (702)
T ss_pred CCcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCccccCcHHHHHHHHHHHHHHHHhhcccccchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987543321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccHHHHHHHHHHHHHHHHhccCCCCCCCCCCCceEEecCCCC
Q 005260 573 ISLIPLFKSIEELAKAAAKIDNEKKELQKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKH 652 (705)
Q Consensus 573 ~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er~fl~~~glp~r~~~khv~~~p~~~ 652 (705)
..+.++.+++..+.+.+..+....++.+ +.++..++..|+|||++||+||+|+|+|+|+|||||+|+|+.|
T Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~N~~l~~~er~f~~p~g~p~~~~yrHv~~gp~~~ 653 (702)
T KOG2195|consen 583 GLFSWRLDALKAAEWESSELSSRFSHGD---------KIEPSKLRPNNDRLMLIERTFLDPAGLPGRSFYRHVIFGPSLH 653 (702)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc---------cccccccccccHHHHHhHHhhcCcccCCCCcccceeEeCCCcc
Confidence 2334444444444444444444333322 1245666677999999999999999999999999999999999
Q ss_pred CCCCCCcchhHHHHHHHHh-hhcchhcHHHHHHHHHHHHHHHHHHHHHhc
Q 005260 653 NDYGSKYFPAIDDAIEEAM-KLNTAKSWHTVQHEVWRVSRAVRHASLVLN 701 (705)
Q Consensus 653 ~~y~~~~fpgi~da~~~~~-~~~~~~~~~~~~~ql~~v~~~i~~a~~~l~ 701 (705)
+.| .||+|.||+...+ .....+.|.++|+||+++.++|++|+..|+
T Consensus 654 ~~~---~~~~v~~a~~~~~~~~~~~~~~~~v~~qi~~~~~~l~~aa~~l~ 700 (702)
T KOG2195|consen 654 NKY---SFPGVDDAIFPGDPDAISKEAWKRVQRQIALLGWTLQGAANTLS 700 (702)
T ss_pred ccc---cccchhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998 8999999999876 455567899999999999999999999997
|
|
| >cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like | Back alignment and domain information |
|---|
| >cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) | Back alignment and domain information |
|---|
| >cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) | Back alignment and domain information |
|---|
| >PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF04253 TFR_dimer: Transferrin receptor-like dimerisation domain; InterPro: IPR007365 This entry represents the dimerisation domain found in the transferrin receptor, as well as in a number of other proteins including glutamate carboxypeptidase II and N-acetylated-alpha-linked acidic dipeptidase like protein | Back alignment and domain information |
|---|
| >COG4882 Predicted aminopeptidase, Iap family [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
| >COG2234 Iap Predicted aminopeptidases [General function prediction only] | Back alignment and domain information |
|---|
| >cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 | Back alignment and domain information |
|---|
| >PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis | Back alignment and domain information |
|---|
| >PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch | Back alignment and domain information |
|---|
| >KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 | Back alignment and domain information |
|---|
| >cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) | Back alignment and domain information |
|---|
| >cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) | Back alignment and domain information |
|---|
| >cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 | Back alignment and domain information |
|---|
| >cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 | Back alignment and domain information |
|---|
| >cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase | Back alignment and domain information |
|---|
| >cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 | Back alignment and domain information |
|---|
| >cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 | Back alignment and domain information |
|---|
| >PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] | Back alignment and domain information |
|---|
| >KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd04821 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 2 | Back alignment and domain information |
|---|
| >cd00538 PA PA: Protease-associated (PA) domain | Back alignment and domain information |
|---|
| >TIGR03176 AllC allantoate amidohydrolase | Back alignment and domain information |
|---|
| >COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only] | Back alignment and domain information |
|---|
| >cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like | Back alignment and domain information |
|---|
| >cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins | Back alignment and domain information |
|---|
| >TIGR01879 hydantase amidase, hydantoinase/carbamoylase family | Back alignment and domain information |
|---|
| >cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 | Back alignment and domain information |
|---|
| >PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional | Back alignment and domain information |
|---|
| >PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional | Back alignment and domain information |
|---|
| >cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like | Back alignment and domain information |
|---|
| >cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like | Back alignment and domain information |
|---|
| >PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) | Back alignment and domain information |
|---|
| >PRK12890 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) | Back alignment and domain information |
|---|
| >PRK12891 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 | Back alignment and domain information |
|---|
| >cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 | Back alignment and domain information |
|---|
| >KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK12893 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK09961 exoaminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK09290 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >PRK12892 allantoate amidohydrolase; Reviewed | Back alignment and domain information |
|---|
| >COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
|---|
| >PRK07906 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK09133 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06133 glutamate carboxypeptidase; Reviewed | Back alignment and domain information |
|---|
| >cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like | Back alignment and domain information |
|---|
| >TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >TIGR01883 PepT-like peptidase T-like protein | Back alignment and domain information |
|---|
| >PRK08596 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >TIGR03107 glu_aminopep glutamyl aminopeptidase | Back alignment and domain information |
|---|
| >TIGR01882 peptidase-T peptidase T | Back alignment and domain information |
|---|
| >PRK13381 peptidase T; Provisional | Back alignment and domain information |
|---|
| >TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase | Back alignment and domain information |
|---|
| >PRK07907 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13983 diaminopimelate aminotransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) | Back alignment and domain information |
|---|
| >PRK06837 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK09104 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07473 carboxypeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK08262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK07338 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05469 peptidase T; Provisional | Back alignment and domain information |
|---|
| >PRK07079 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08201 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06915 acetylornithine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK06446 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK07522 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase | Back alignment and domain information |
|---|
| >PRK09864 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK04443 acetyl-lysine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK05111 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK08652 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK07318 dipeptidase PepV; Reviewed | Back alignment and domain information |
|---|
| >PRK08554 peptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01886 dipeptidase dipeptidase PepV | Back alignment and domain information |
|---|
| >PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >PRK06156 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13004 peptidase; Reviewed | Back alignment and domain information |
|---|
| >COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07205 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase | Back alignment and domain information |
|---|
| >TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase | Back alignment and domain information |
|---|
| >PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01887 dipeptidaselike dipeptidase, putative | Back alignment and domain information |
|---|
| >TIGR01891 amidohydrolases amidohydrolase | Back alignment and domain information |
|---|
| >TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family | Back alignment and domain information |
|---|
| >PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK00466 acetyl-lysine deacetylase; Validated | Back alignment and domain information |
|---|
| >PRK15026 aminoacyl-histidine dipeptidase; Provisional | Back alignment and domain information |
|---|
| >TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade | Back alignment and domain information |
|---|
| >PLN02693 IAA-amino acid hydrolase | Back alignment and domain information |
|---|
| >COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02280 IAA-amino acid hydrolase | Back alignment and domain information |
|---|
| >PRK02256 putative aminopeptidase 1; Provisional | Back alignment and domain information |
|---|
| >TIGR03526 selenium_YgeY putative selenium metabolism hydrolase | Back alignment and domain information |
|---|
| >KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08737 acetylornithine deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR03320 ygeY M20/DapE family protein YgeY | Back alignment and domain information |
|---|
| >PTZ00371 aspartyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK02813 putative aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins | Back alignment and domain information |
|---|
| >KOG3920 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07338 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 705 | ||||
| 3fec_A | 707 | Crystal Structure Of Human Glutamate Carboxypeptida | 1e-110 | ||
| 2oot_A | 709 | A High Resolution Structure Of Ligand-Free Human Gl | 1e-109 | ||
| 2c6c_A | 707 | Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii | 1e-109 | ||
| 3rbu_A | 739 | N-Terminally Avitev-Tagged Human Glutamate Carboxyp | 1e-109 | ||
| 1z8l_A | 695 | Crystal Structure Of Prostate-Specific Membrane Ant | 1e-108 | ||
| 3bxm_A | 709 | Structure Of An Inactive Mutant Of Human Glutamate | 1e-108 | ||
| 2xef_A | 709 | Human Glutamate Carboxypeptidase Ii In Complex With | 1e-108 | ||
| 1de4_C | 640 | Hemochromatosis Protein Hfe Complexed With Transfer | 4e-44 | ||
| 1cx8_A | 639 | Crytal Structure Of The Ectodomain Of Human Transfe | 4e-44 | ||
| 3s9l_A | 654 | Complex Between Transferrin Receptor 1 And Transfer | 4e-44 | ||
| 1xjo_A | 284 | Structure Of Aminopeptidase Length = 284 | 1e-09 | ||
| 1cp7_A | 284 | Aminopeptidase From Streptomyces Griseus Length = 2 | 1e-09 | ||
| 3iib_A | 444 | Crystal Structure Of Peptidase M28 Precursor (Yp_92 | 2e-07 | ||
| 3b35_A | 291 | Crystal Structure Of The M180a Mutant Of The Aminop | 1e-05 | ||
| 1cp6_A | 291 | 1-Butaneboronic Acid Binding To Aeromonas Proteolyt | 1e-05 | ||
| 3b3v_A | 291 | Crystal Structure Of The S228a Mutant Of The Aminop | 1e-05 | ||
| 1igb_A | 291 | Aeromonas Proteolytica Aminopeptidase Complexed Wit | 1e-05 | ||
| 3b3t_A | 291 | Crystal Structure Of The D118n Mutant Of The Aminop | 2e-05 | ||
| 1rtq_A | 299 | The 0.95 Angstrom Resolution Crystal Structure Of T | 2e-05 | ||
| 2anp_A | 291 | Functional Glutamate 151 To Histidine Mutant Of The | 6e-05 |
| >pdb|3FEC|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Iii (GcpiiiNAALADASE II), PSEUDO-Unliganded Length = 707 | Back alignment and structure |
|
| >pdb|2OOT|A Chain A, A High Resolution Structure Of Ligand-Free Human Glutamate Carboxypeptidase Ii Length = 709 | Back alignment and structure |
| >pdb|2C6C|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In Complex With Gpi-18431 (S)-2-(4-Iodobenzylphosphonomethyl)- Pentanedioic Acid Length = 707 | Back alignment and structure |
| >pdb|3RBU|A Chain A, N-Terminally Avitev-Tagged Human Glutamate Carboxypeptidase Ii In Complex With 2-Pmpa Length = 739 | Back alignment and structure |
| >pdb|1Z8L|A Chain A, Crystal Structure Of Prostate-Specific Membrane Antigen, A Tumor Marker And Peptidase Length = 695 | Back alignment and structure |
| >pdb|3BXM|A Chain A, Structure Of An Inactive Mutant Of Human Glutamate Carboxypeptidase Ii [gcpii(E424a)] In Complex With N-Acetyl-Asp-Glu (Naag) Length = 709 | Back alignment and structure |
| >pdb|2XEF|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With Antibody-Recruiting Molecule Arm-P8 Length = 709 | Back alignment and structure |
| >pdb|1DE4|C Chain C, Hemochromatosis Protein Hfe Complexed With Transferrin Receptor Length = 640 | Back alignment and structure |
| >pdb|1CX8|A Chain A, Crytal Structure Of The Ectodomain Of Human Transferrin Receptor Length = 639 | Back alignment and structure |
| >pdb|3S9L|A Chain A, Complex Between Transferrin Receptor 1 And Transferrin With Iron In The N-Lobe, Cryocooled 2 Length = 654 | Back alignment and structure |
| >pdb|1XJO|A Chain A, Structure Of Aminopeptidase Length = 284 | Back alignment and structure |
| >pdb|1CP7|A Chain A, Aminopeptidase From Streptomyces Griseus Length = 284 | Back alignment and structure |
| >pdb|3IIB|A Chain A, Crystal Structure Of Peptidase M28 Precursor (Yp_926796.1) From Shewanella Amazonensis Sb2b At 1.70 A Resolution Length = 444 | Back alignment and structure |
| >pdb|3B35|A Chain A, Crystal Structure Of The M180a Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
| >pdb|1CP6|A Chain A, 1-Butaneboronic Acid Binding To Aeromonas Proteolytica Aminopeptidase Length = 291 | Back alignment and structure |
| >pdb|3B3V|A Chain A, Crystal Structure Of The S228a Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
| >pdb|1IGB|A Chain A, Aeromonas Proteolytica Aminopeptidase Complexed With The Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate Length = 291 | Back alignment and structure |
| >pdb|3B3T|A Chain A, Crystal Structure Of The D118n Mutant Of The Aminopeptidase From Vibrio Proteolyticus Length = 291 | Back alignment and structure |
| >pdb|1RTQ|A Chain A, The 0.95 Angstrom Resolution Crystal Structure Of The Aminopeptidase From Aeromonas Proteolytica Length = 299 | Back alignment and structure |
| >pdb|2ANP|A Chain A, Functional Glutamate 151 To Histidine Mutant Of The Aminopeptidase From Aeromonas Proteolytica Length = 291 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Length = 707 | Back alignment and structure |
|---|
Score = 563 bits (1451), Expect = 0.0
Identities = 236/710 (33%), Positives = 363/710 (51%), Gaps = 37/710 (5%)
Query: 21 SSPQPKSFYHSLYTS-TSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSL 79
+ ++ S+ S +I L + T+ PH+AG+E N A + + + L
Sbjct: 3 ETTTSVRYHQSIRWKLVSEMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGL 62
Query: 80 ES-HIASYGVSLTYPVSRSLSLTRP-PPQPPITFALRQEIYEGDPYADVADEVLPTFHGY 137
+S + Y V L+YP + + F D Y +V + ++P ++ +
Sbjct: 63 DSAKLVHYDVLLSYPNETNANYISIVDEHETEIFKTSYLEPPPDGYENVTN-IVPPYNAF 121
Query: 138 AKSGTVIGPVVYVNYGRVEDYVTL-KEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAG 196
+ G G +VYVNY R ED+ L +EM +N TG +V+ARYG+IFRG+ V NA AGA G
Sbjct: 122 SAQGMPEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIG 181
Query: 197 ALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVY--DGTGDPTTPGWPSSEGCERLS 254
++++D DY + + +P +P + Q G+V +G GDP TPG+P+ E RL
Sbjct: 182 IILYSDPADYFA--PEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLD 239
Query: 255 KEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVA-NEDWQGDKDAPIY-----RVGPGP 308
EE +P IP PI D E ++R +GG ++ W+G +
Sbjct: 240 VEE---GVGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGSDSF 296
Query: 309 GVVNLSYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVA 368
V + + I NV+G I G+ EPDR VILG HRD+W FGA+DP SG A L E+A
Sbjct: 297 RKVRMHVYNINKITRIYNVVGTIRGSVEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIA 356
Query: 369 QRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVH-E 427
+ KL +GW+PRRTI+ +WDAEE+GL+GSTEW EEN ++L R++AY+N DS++
Sbjct: 357 RSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKILQERSIAYINSDSSIEGN 416
Query: 428 AGFHASATPQLDELLKQAAKQVQDPDN--SSQTIYDSWTGSSNSPVIGRLG-----GGGS 480
TP L +L+ + K++ PD+ S+++Y+SW SP L G GS
Sbjct: 417 YTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLGSGS 476
Query: 481 DYAAFIQHIGVPVADMSFG--------TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASM 532
D+ A+ Q +G+ + + YPVYH++Y+ F +EKF DPTF++ ++ A +
Sbjct: 477 DFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQL 536
Query: 533 WGLVALQLADEEFLPFNYLSYAFELQKSTKDLENEVSGKGISLIPLFKSIEELAKAAAKI 592
G + +L D + +PFN YA L+ + N L S + L A
Sbjct: 537 RGALVYELVDSKIIPFNIQDYAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNF 596
Query: 593 DNEKKELQKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKH 652
+ K + VR +ND+LM+ ERAF D GL G+ +Y+H+I+APS H
Sbjct: 597 SEAASDFHKR--LIQVDLNNPIAVRMMNDQLMLLERAFIDPLGLPGKLFYRHIIFAPSSH 654
Query: 653 NDYGSKYFPAIDDAIEEA-MKLNTAKSWHTVQHEVWRVSRAVRHASLVLN 701
N Y + FP I DAI + K N+ +W V+ + + ++ A+ L
Sbjct: 655 NKYAGESFPGIYDAIFDIENKANSRLAWKEVKKHISIAAFTIQAAAGTLK 704
|
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Length = 640 | Back alignment and structure |
|---|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Length = 421 | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Length = 284 | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Length = 299 | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Length = 444 | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Length = 330 | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Length = 329 | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Length = 309 | Back alignment and structure |
|---|
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Length = 314 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Length = 474 | Back alignment and structure |
|---|
| >3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Length = 408 | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 705 | |||
| 3fed_A | 707 | Glutamate carboxypeptidase III; metallopeptidase, | 100.0 | |
| 3kas_A | 640 | Transferrin receptor protein 1; transferrin recept | 100.0 | |
| 2ek8_A | 421 | Aminopeptidase; metalloproteinase, hydrolase; 1.80 | 100.0 | |
| 3iib_A | 444 | Peptidase M28; YP_926796.1, structural genomics, J | 100.0 | |
| 4f9u_A | 312 | CG32412; alpha/beta hydrolase, PGlu formation, PE, | 100.0 | |
| 4fai_A | 330 | CG5976, isoform B; alpha/beta hydrolase, PGlu form | 99.97 | |
| 4fuu_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase li | 99.96 | |
| 2afw_A | 329 | Glutaminyl-peptide cyclotransferase; alpha-beta pr | 99.95 | |
| 3pb6_X | 330 | Glutaminyl-peptide cyclotransferase-like protein; | 99.95 | |
| 1tkj_A | 284 | Aminopeptidase, SGAP; double-zinc metalloproteinas | 99.94 | |
| 3tc8_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase-li | 99.94 | |
| 3gux_A | 314 | Putative Zn-dependent exopeptidase; aminopeptidase | 99.94 | |
| 1rtq_A | 299 | Bacterial leucyl aminopeptidase; bimetallic, zinc, | 99.94 | |
| 3k9t_A | 435 | Putative peptidase; structural genomics, joint cen | 99.89 | |
| 4h2k_A | 269 | Succinyl-diaminopimelate desuccinylase; DAPE, MCSG | 99.31 | |
| 3t68_A | 268 | Succinyl-diaminopimelate desuccinylase; DAPE, csgi | 99.25 | |
| 1y0y_A | 353 | FRV operon protein FRVX; aminopeptidase, PDZ, hydr | 99.12 | |
| 2wyr_A | 332 | Cobalt-activated peptidase TET1; hydrolase, large | 99.1 | |
| 1vhe_A | 373 | Aminopeptidase/glucanase homolog; structural genom | 99.06 | |
| 2fvg_A | 340 | Endoglucanase; TM1049, structural genomics, joint | 99.05 | |
| 2gre_A | 349 | Deblocking aminopeptidase; structural genomi prote | 99.04 | |
| 3icu_A | 194 | E3 ubiquitin-protein ligase RNF128; E3 ligase, ene | 98.8 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 98.64 | |
| 3n5f_A | 408 | L-carbamoylase, N-carbamoyl-L-amino acid hydrolase | 98.5 | |
| 3kl9_A | 355 | PEPA, glutamyl aminopeptidase; tetrahedral aminope | 98.48 | |
| 1ylo_A | 348 | Hypothetical protein SF2450; structural genomics, | 98.4 | |
| 1vho_A | 346 | Endoglucanase; structural genomics, unknown functi | 98.31 | |
| 1cg2_A | 393 | Carboxypeptidase G2; metallocarboxypeptidase, hydr | 98.28 | |
| 2pok_A | 481 | Peptidase, M20/M25/M40 family; M20 family peptidas | 98.25 | |
| 2zog_A | 479 | Cytosolic non-specific dipeptidase; metallopeptida | 98.2 | |
| 3ct9_A | 356 | Acetylornithine deacetylase; NP_812461.1, A putati | 98.2 | |
| 3dlj_A | 485 | Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti | 98.16 | |
| 1z2l_A | 423 | Allantoate amidohydrolase; ALLC, purine cataboli a | 98.11 | |
| 3cpx_A | 321 | Aminopeptidase, M42 family; YP_676701.1, putative | 98.08 | |
| 2vpu_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 98.07 | |
| 2v8h_A | 474 | Beta-alanine synthase; amidohydrolase, alpha and b | 98.06 | |
| 3pfo_A | 433 | Putative acetylornithine deacetylase; metal bindin | 98.04 | |
| 3gb0_A | 373 | Peptidase T; NP_980509.1, aminopeptidase PEPT, pep | 97.98 | |
| 2rb7_A | 364 | Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat | 97.91 | |
| 3tx8_A | 369 | Succinyl-diaminopimelate desuccinylase; peptidase, | 97.87 | |
| 3ife_A | 434 | Peptidase T; metallopeptidase, aminopeptidase, hyd | 97.85 | |
| 3rza_A | 396 | Tripeptidase; phosphorylase/hydrolase-like, struct | 97.81 | |
| 3pfe_A | 472 | Succinyl-diaminopimelate desuccinylase; metal bind | 97.78 | |
| 1vgy_A | 393 | Succinyl-diaminopimelate desuccinylase; structural | 97.75 | |
| 1xmb_A | 418 | IAA-amino acid hydrolase homolog 2; structural gen | 97.68 | |
| 3khx_A | 492 | Putative dipeptidase sacol1801; DAPE, metallopepti | 97.67 | |
| 1lfw_A | 470 | PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac | 97.61 | |
| 1fno_A | 417 | Peptidase T; metallo peptidase, protease, hydrolas | 97.58 | |
| 3isz_A | 377 | Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b | 97.5 | |
| 3isx_A | 343 | Endoglucanase; TM1050, structural genomics, joint | 97.49 | |
| 1ysj_A | 404 | Protein YXEP; M20 family peptidase, dinuclear meta | 97.47 | |
| 2f7v_A | 369 | Aectylcitrulline deacetylase; alpha/beta, hydrolas | 97.35 | |
| 3mru_A | 490 | Aminoacyl-histidine dipeptidase; metalloprotease, | 97.31 | |
| 3ram_A | 394 | HMRA protein; two-domain, catalytic (alpha-beta-al | 97.28 | |
| 2qyv_A | 487 | XAA-His dipeptidase; YP_718209.1, structural genom | 97.18 | |
| 3io1_A | 445 | Aminobenzoyl-glutamate utilization protein; peptid | 97.12 | |
| 4fuu_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase li | 96.85 | |
| 2wzn_A | 354 | TET3, 354AA long hypothetical operon protein FRV; | 96.14 | |
| 3i6s_A | 649 | Subtilisin-like protease; PA-domain, FN3-domain, h | 95.75 | |
| 3tc8_A | 309 | Leucine aminopeptidase; phosphorylase/hydrolase-li | 95.51 | |
| 3gux_A | 314 | Putative Zn-dependent exopeptidase; aminopeptidase | 95.48 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 95.46 | |
| 2glf_A | 450 | Probable M18-family aminopeptidase 1; putative, NY | 95.24 | |
| 4fai_A | 330 | CG5976, isoform B; alpha/beta hydrolase, PGlu form | 95.22 | |
| 4f9u_A | 312 | CG32412; alpha/beta hydrolase, PGlu formation, PE, | 95.01 | |
| 3pb6_X | 330 | Glutaminyl-peptide cyclotransferase-like protein; | 94.21 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 93.99 | |
| 2afw_A | 329 | Glutaminyl-peptide cyclotransferase; alpha-beta pr | 92.05 | |
| 1y7e_A | 458 | Probable M18-family aminopeptidase 1; aminopeptida | 91.82 | |
| 3vat_A | 496 | Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s | 91.74 | |
| 2ijz_A | 428 | Probable M18-family aminopeptidase 2; putative ami | 91.55 | |
| 2glj_A | 461 | Probable M18-family aminopeptidase 1; aminopeptida | 91.29 | |
| 1tkj_A | 284 | Aminopeptidase, SGAP; double-zinc metalloproteinas | 90.25 | |
| 1rtq_A | 299 | Bacterial leucyl aminopeptidase; bimetallic, zinc, | 86.72 | |
| 1q7l_A | 198 | Aminoacylase-1; catalysis, enzyme dimerization, si | 82.33 |
| >3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-129 Score=1123.29 Aligned_cols=660 Identities=36% Similarity=0.672 Sum_probs=590.7
Q ss_pred CCchhHHHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeEEEEEEeeeCc---cceE
Q 005260 24 QPKSFYHSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPVS---RSLS 99 (705)
Q Consensus 24 ~~~~~~~~~~~~~~~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~-~~~~~y~v~~~~P~~---~~l~ 99 (705)
....++++.+++ .++.++|++||++|++.||++||+++.++|+||+++|+++||+ +++++|+|+++||.. .+++
T Consensus 9 ~~~~~l~~~~~~--~~~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~y~v~l~~P~~~~~~~l~ 86 (707)
T 3fed_A 9 RYHQSIRWKLVS--EMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYIS 86 (707)
T ss_dssp ----CHHHHHHH--HCCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEEEEEECCTTSCCEEE
T ss_pred CCHHHHHHHHHH--hCCHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeEEeeeEEeecccCCCCceEE
Confidence 445688899999 8999999999999999999999999999999999999999999 899999999999975 4688
Q ss_pred EecCCCCCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHhc-CCcccceEEEEEeC
Q 005260 100 LTRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEM-VVNVTGTVVLARYG 178 (705)
Q Consensus 100 l~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~-gv~v~GkIvl~~~g 178 (705)
|++++|+..+.+.+.|+.+++++ ...+.+++|++||++|+++|+|||||||+.+||+.|++. |++++|||||++||
T Consensus 87 l~~~~g~~~~~~~l~e~~~~~~~---~~~~~~~~f~ays~~G~v~g~lV~v~~G~~~Df~~L~~~~~~~v~GkIvlv~~G 163 (707)
T 3fed_A 87 IVDEHETEIFKTSYLEPPPDGYE---NVTNIVPPYNAFSAQGMPEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYG 163 (707)
T ss_dssp EECTTSCEEEECC---CCCTTCT---TCCCCCCSCCTTCCCBCCEECEEECTTCCHHHHHHHHHTSCCCCTTCEEEEECC
T ss_pred EEcCCCceeeeccccccCCcccc---ccccccccccccCCCCceEEEEEEecCCchhhHHHHHhccCCCCCCeEEEEECC
Confidence 88877776788888887776544 346788899999999999999999999999999999985 99999999999999
Q ss_pred CCcchhHHHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeeee--cCCCCCCCCCCCCCCcccccchH
Q 005260 179 QIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVY--DGTGDPTTPGWPSSEGCERLSKE 256 (705)
Q Consensus 179 ~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~--~~~Gdp~tPg~ps~~~~~r~~~~ 256 (705)
+|+++.|+++|+++||+|||||+||.++... ..++||++||+|++++|||+|. .++|||+||||||.++++|+++.
T Consensus 164 ~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~--g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~ 241 (707)
T 3fed_A 164 KIFRGNKVKNAMLAGAIGIILYSDPADYFAP--EVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVE 241 (707)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECCHHHHCCT--TCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGG
T ss_pred CCCHhHHHHHHHHCCCEEEEEEcCchhcccc--ccccCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChh
Confidence 9999999999999999999999998765321 1258999999999999999994 46799999999999999999988
Q ss_pred HHhhcCCCCCCCcccCCHHHHHHHHHHcCCCCCCcc-ccCCCCCCccccCCCC------eEEEEEEeeeeeeeeeeeEEE
Q 005260 257 EVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANED-WQGDKDAPIYRVGPGP------GVVNLSYTGEYVMATIQNVIG 329 (705)
Q Consensus 257 ~~~~~~~~p~IP~~~is~~~a~~Ll~~l~~~~~~~~-w~~~l~~~~y~~gp~~------~~v~l~~~~~~~~~~~~NVia 329 (705)
++ ..+|+||++|||+++|++|++.|+|..+|.+ |+|+++ ++|++||+. .+|+|.+++..+..+++||||
T Consensus 242 ~~---~~~p~IP~~pIS~~da~~Ll~~l~g~~~p~~~W~g~~~-~~y~~gp~~~g~~~~~~v~l~v~~~~~~~~~~NVi~ 317 (707)
T 3fed_A 242 EG---VGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALN-VSYSIGPGFTGSDSFRKVRMHVYNINKITRIYNVVG 317 (707)
T ss_dssp GC---TTCCSSCEEEECHHHHHHHHHTBCBSCCSSGGGCCSSS-SCCCCBSSBCCC-CCCEEEEEBCCEEEEEEEEEEEE
T ss_pred hc---cCCCCCCeEecCHHHHHHHHHHhcCCCCcccccccCcC-cceecccccCCCCCceeEEEEEEEEEEEEEEEEEEE
Confidence 64 4699999999999999999999998888876 999997 889999852 478999998888999999999
Q ss_pred EecCCCCCCcEEEEeeccCCcCCCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHH
Q 005260 330 IIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENRE 409 (705)
Q Consensus 330 ~i~G~~~p~~~ViigaH~Ds~~~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~ 409 (705)
+|+|+.+++++||||||+|||..||.||+||+|+|||+||.|+++.+.||+|+|+|+||+|+|||.|++||++|++++..
T Consensus 318 ~i~G~~~~~~~vllgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~~~~~~ 397 (707)
T 3fed_A 318 TIRGSVEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVK 397 (707)
T ss_dssp EECCSSEEEEEEEEEEECCCSSSCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHH
T ss_pred EEeCCCCCCceEEEeccccCCCCCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHHHhcch
Confidence 99999767899999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hhhccEEEEEEccCcccCC-ccccccChhHHHHHHHHHHHcCCCCC--CccchhhccccCC------CCCccccCCCCCC
Q 005260 410 MLASRAVAYLNIDSAVHEA-GFHASATPQLDELLKQAAKQVQDPDN--SSQTIYDSWTGSS------NSPVIGRLGGGGS 480 (705)
Q Consensus 410 ~l~~~~va~iNlD~~g~g~-~l~~~~sp~l~~l~~~~~~~v~~p~~--~~~~l~~~~~~~~------~~~~~~~~g~~~S 480 (705)
.+.+++++|||+||++.|. .|.+.++|.+..++.++++.+.+|.. .++++|+.|.... ..+.+..+| ++|
T Consensus 398 ~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~~p~i~~lg-sgS 476 (707)
T 3fed_A 398 ILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLG-SGS 476 (707)
T ss_dssp HHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEEEECEECCC-SSS
T ss_pred hhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccCCcccccCC-CCC
Confidence 8889999999999999984 78999999999999999999999864 3588999998632 123466788 999
Q ss_pred chHHHHhcCCceEEEeeeCC--------CCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Q 005260 481 DYAAFIQHIGVPVADMSFGT--------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLS 552 (705)
Q Consensus 481 D~~~F~~~~GIPs~~l~~~~--------~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~ 552 (705)
||.||+++.|||++++.|.. .||+|||.+||++||++|+||+|.+|.+++++++.++++||+++++|||+.+
T Consensus 477 D~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~La~~~vlP~~~~~ 556 (707)
T 3fed_A 477 DFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSKIIPFNIQD 556 (707)
T ss_dssp TTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHCSSCCCCHHH
T ss_pred ChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCccCCCCHHH
Confidence 99999998999999999862 5789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-------hhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccHHHHHHHHHHHHH
Q 005260 553 YAFELQKSTKDLENE-------VSGKGISLIPLFKSIEELAKAAAKIDNEKKELQKAKGWASTWKKDQYKVRELNDRLMM 625 (705)
Q Consensus 553 y~~~l~~~~~~l~~~-------~~~~~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~ 625 (705)
|+..|.+++++|.+. ++..+++|++|.+++.+|+++|++|++.++.++. .++..+|++|+|||+
T Consensus 557 ya~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~~a~~~~~~~~~~~~---------~~~~~~r~~N~~l~~ 627 (707)
T 3fed_A 557 YAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSEAASDFHKRLIQVDL---------NNPIAVRMMNDQLML 627 (707)
T ss_dssp HHHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTCCT---------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHHHHHHHHHHHHhhhc---------CCHHHHHHHHHHHHH
Confidence 999999999987521 2334689999999999999999999997765432 267899999999999
Q ss_pred HHHhccCCCCCCCCCCCceEEecCCCCCCCCCCcchhHHHHHHHH-hhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005260 626 AERAFTDRDGLSGRPWYKHLIYAPSKHNDYGSKYFPAIDDAIEEA-MKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 704 (705)
Q Consensus 626 ~er~fl~~~glp~r~~~khv~~~p~~~~~y~~~~fpgi~da~~~~-~~~~~~~~~~~~~~ql~~v~~~i~~a~~~l~~~~ 704 (705)
+||+||+|+|||+|+|||||||||+.+++|++++||||+|||.+. +.....++|+++|+||++++++|++|++.|+..|
T Consensus 628 ~Er~fl~~~glp~r~~~kHvi~ap~~~~~y~~~~fPgi~dai~~~~~~~~~~~~~~~~~~ql~~~~~~i~~aa~~L~~~~ 707 (707)
T 3fed_A 628 LERAFIDPLGLPGKLFYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANSRLAWKEVKKHISIAAFTIQAAAGTLKEVL 707 (707)
T ss_dssp HHHHTBCTTCBTTBTTCCBSSEEEETTEEEEEEESHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred HHHHhcCCCCCCCCCCCceEEECCCCCCCccceeCchHHHHHHHhhccCcchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999865 3333456899999999999999999999998653
|
| >3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A | Back alignment and structure |
|---|
| >2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* | Back alignment and structure |
|---|
| >3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* | Back alignment and structure |
|---|
| >4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* | Back alignment and structure |
|---|
| >4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... | Back alignment and structure |
|---|
| >3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
| >4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A | Back alignment and structure |
|---|
| >1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A | Back alignment and structure |
|---|
| >2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A | Back alignment and structure |
|---|
| >1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
| >3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} | Back alignment and structure |
|---|
| >3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* | Back alignment and structure |
|---|
| >3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} | Back alignment and structure |
|---|
| >1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A | Back alignment and structure |
|---|
| >3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A | Back alignment and structure |
|---|
| >3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} | Back alignment and structure |
|---|
| >2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A | Back alignment and structure |
|---|
| >3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A | Back alignment and structure |
|---|
| >1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A | Back alignment and structure |
|---|
| >3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A | Back alignment and structure |
|---|
| >3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 | Back alignment and structure |
|---|
| >2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A | Back alignment and structure |
|---|
| >3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} | Back alignment and structure |
|---|
| >3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
| >3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A | Back alignment and structure |
|---|
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* | Back alignment and structure |
|---|
| >3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* | Back alignment and structure |
|---|
| >2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* | Back alignment and structure |
|---|
| >4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* | Back alignment and structure |
|---|
| >3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
| >2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... | Back alignment and structure |
|---|
| >1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 | Back alignment and structure |
|---|
| >3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* | Back alignment and structure |
|---|
| >2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
| >1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A | Back alignment and structure |
|---|
| >1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... | Back alignment and structure |
|---|
| >1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 705 | ||||
| d3bi1a3 | 304 | c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypep | 9e-65 | |
| d3bi1a3 | 304 | c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypep | 0.004 | |
| d3bi1a2 | 233 | c.8.4.1 (A:118-350) Glutamate carboxypeptidase II | 5e-62 | |
| d1de4c3 | 294 | c.56.5.5 (C:122-189,C:383-608) Transferrin recepto | 1e-59 | |
| d1de4c2 | 193 | c.8.4.1 (C:190-382) Transferrin receptor ectodomai | 3e-46 | |
| d3bi1a1 | 157 | a.48.2.1 (A:594-750) Glutamate carboxypeptidase II | 3e-40 | |
| d1de4c1 | 148 | a.48.2.1 (C:609-756) Transferrin receptor ectodoma | 2e-36 | |
| d2afwa1 | 329 | c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransf | 5e-23 | |
| d1rtqa_ | 291 | c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolyti | 7e-23 | |
| d1tkja1 | 277 | c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces gr | 2e-11 | |
| d1z2la1 | 293 | c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydro | 5e-08 | |
| d1vhea2 | 275 | c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y | 6e-07 | |
| d1r3na1 | 322 | c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta- | 1e-06 | |
| d2fvga2 | 255 | c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { | 7e-06 | |
| d2grea2 | 233 | c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid | 1e-05 | |
| d3bzka5 | 149 | c.55.3.13 (A:325-473) Transcriptional accessory fa | 0.004 |
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: FolH catalytic domain-like domain: Glutamate carboxypeptidase II FOLH1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (546), Expect = 9e-65
Identities = 97/249 (38%), Positives = 140/249 (56%), Gaps = 16/249 (6%)
Query: 314 SYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNK 373
Y + I NVIG + G EPDR VILG HRD+W FG +DP SG A + E+ +
Sbjct: 56 HYDVLLEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGT 115
Query: 374 LQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVH-EAGFHA 432
L+K GW+PRRTI+ +WDAEE+GL+GSTEW EEN +L R VAY+N DS++
Sbjct: 116 LKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRV 175
Query: 433 SATPQLDELLKQAAKQVQDPD--NSSQTIYDSWTGSSNSPVIG-----RLGGGGSDYAAF 485
TP + L+ K+++ PD +++Y+SWT S SP G G+D+ F
Sbjct: 176 DCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVF 235
Query: 486 IQHIGVPVADMSFG--------TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVA 537
Q +G+ + +GYP+YHS+Y+ + +EKF DP F+ H+ A + G +
Sbjct: 236 FQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMV 295
Query: 538 LQLADEEFL 546
+LA+ L
Sbjct: 296 FELANSIVL 304
|
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
| >d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Length = 233 | Back information, alignment and structure |
|---|
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
| >d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} Length = 193 | Back information, alignment and structure |
|---|
| >d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Length = 157 | Back information, alignment and structure |
|---|
| >d1de4c1 a.48.2.1 (C:609-756) Transferrin receptor ectodomain, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 148 | Back information, alignment and structure |
|---|
| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Length = 329 | Back information, alignment and structure |
|---|
| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Length = 291 | Back information, alignment and structure |
|---|
| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Length = 277 | Back information, alignment and structure |
|---|
| >d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Length = 293 | Back information, alignment and structure |
|---|
| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 | Back information, alignment and structure |
|---|
| >d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 322 | Back information, alignment and structure |
|---|
| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 | Back information, alignment and structure |
|---|
| >d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]} Length = 149 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 705 | |||
| d3bi1a2 | 233 | Glutamate carboxypeptidase II {Human (Homo sapiens | 100.0 | |
| d3bi1a3 | 304 | Glutamate carboxypeptidase II FOLH1 {Human (Homo s | 100.0 | |
| d1de4c3 | 294 | Transferrin receptor ectodomain, protease-like dom | 100.0 | |
| d1de4c2 | 193 | Transferrin receptor ectodomain, apical domain {Hu | 100.0 | |
| d1rtqa_ | 291 | Aminopeptidase {Aeromonas proteolytica [TaxId: 671 | 100.0 | |
| d1tkja1 | 277 | Aminopeptidase {Streptomyces griseus [TaxId: 1911] | 99.98 | |
| d3bi1a1 | 157 | Glutamate carboxypeptidase II {Human (Homo sapiens | 99.97 | |
| d2afwa1 | 329 | Glutaminyl-peptide cyclotransferase, QPCT {Human ( | 99.97 | |
| d1de4c1 | 148 | Transferrin receptor ectodomain, C-terminal domain | 99.96 | |
| d1vhoa2 | 248 | Putative endoglucanase TM1048, catalytic domain {T | 99.65 | |
| d1yloa2 | 264 | Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 | 99.63 | |
| d2fvga2 | 255 | Endoglucanase TM1049 {Thermotoga maritima [TaxId: | 99.4 | |
| d1vhea2 | 275 | Hypothetical protein YsdC, catalytic domain {Bacil | 99.37 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 99.17 | |
| d1z2la1 | 293 | Allantoate amidohydrolase AllC catalytic domain {E | 99.15 | |
| d2grea2 | 233 | Deblocking aminopeptidase YhfE {Bacillus cereus [T | 99.07 | |
| d1fnoa4 | 295 | Peptidase T (tripeptidase), catalytic domain {Salm | 99.05 | |
| d1r3na1 | 322 | Peptidase-like beta-alanine synthase, catalytic do | 98.83 | |
| g1q7l.1 | 280 | Aminoacylase-1, catalytic domain {Human (Homo sapi | 98.78 | |
| d1y0ya2 | 255 | Frv operon protein FrvX, catalytic domain {Pyrococ | 98.36 | |
| d1lfwa1 | 272 | Aminopeptidase PepV {Lactobacillus delbrueckii [Ta | 98.15 | |
| d1vgya1 | 262 | Succinyl-diaminopimelate desuccinylase, catalytic | 97.37 | |
| d1tkja1 | 277 | Aminopeptidase {Streptomyces griseus [TaxId: 1911] | 96.37 | |
| d3bi1a3 | 304 | Glutamate carboxypeptidase II FOLH1 {Human (Homo s | 96.36 | |
| d1rtqa_ | 291 | Aminopeptidase {Aeromonas proteolytica [TaxId: 671 | 96.17 | |
| d1de4c3 | 294 | Transferrin receptor ectodomain, protease-like dom | 95.68 | |
| d1ysja1 | 261 | Protein YxeP {Bacillus subtilis [TaxId: 1423]} | 95.64 | |
| d1xmba1 | 273 | IAA-amino acid hydrolase, catalytic domain {Mouse- | 94.42 | |
| d1y7ea2 | 322 | Probable aminopeptidase ApeA {Borrelia burgdorferi | 93.74 | |
| d2afwa1 | 329 | Glutaminyl-peptide cyclotransferase, QPCT {Human ( | 92.81 | |
| d1z2la1 | 293 | Allantoate amidohydrolase AllC catalytic domain {E | 89.97 | |
| d1cg2a1 | 276 | Carboxypeptidase G2, catalytic domain {Pseudomonas | 81.81 |
| >d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: The "swivelling" beta/beta/alpha domain superfamily: PA domain family: PA domain domain: Glutamate carboxypeptidase II species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-48 Score=385.92 Aligned_cols=219 Identities=33% Similarity=0.637 Sum_probs=194.1
Q ss_pred eeeCc---cceEEecCCCCCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHH-hcCC
Q 005260 91 TYPVS---RSLSLTRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVV 166 (705)
Q Consensus 91 ~~P~~---~~l~l~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv 166 (705)
|||.. .+++|.+++|++.|++.+.|..+++.+ ...+.+++|++||++|+|+|+|||||||+.+||++|+ +.|+
T Consensus 1 SYP~~~~pn~v~l~~~~G~~~~~~~l~E~~~~~~~---~~~~~~p~f~ays~~G~v~g~~VyvnyG~~~Df~~L~~~~gi 77 (233)
T d3bi1a2 1 SYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYE---NVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKI 77 (233)
T ss_dssp EECCTTSCCEEEEECTTSCEEEECCSSCCCCTTCT---TCCCCCCSCEETCCCBCCEECEEECTTCCHHHHHHHHHTSCC
T ss_pred CCCCCCCCCEEEEEeCCCCEEEeecccccCCcccc---ccccccccceeeCCCCceeEEEEEecCCcHHHHHHHHHhcCC
Confidence 57743 468999888887899999998776543 4567789999999999999999999999999999997 5899
Q ss_pred cccceEEEEEeCCCcchhHHHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeee--ecCCCCCCCCCC
Q 005260 167 NVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSV--YDGTGDPTTPGW 244 (705)
Q Consensus 167 ~v~GkIvl~~~g~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v--~~~~Gdp~tPg~ 244 (705)
+++|||||+|||+++++.|+++|+++||+|||||+||.+++... .++||++||+|+++||||+| +.+.|||+||||
T Consensus 78 ~~~gkIvl~ryG~~~~~~Kv~~A~~~GA~GviiysDP~d~~~~g--~~~yP~~~~~p~~~vqrgsv~~~~~~GDplTPg~ 155 (233)
T d3bi1a2 78 NCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPG--VKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGY 155 (233)
T ss_dssp CCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTT--CCBTTSSSBCCTTCCCCEECCCCTTCCSTTCTTS
T ss_pred cccceEEEEeCCCCchhHHHHHHHHcCceEEEEecChHHccCcc--cccccCCccCCCCceeEeeeeecCCCCCCCCCCC
Confidence 99999999999999999999999999999999999998876533 36899999999999999999 345899999999
Q ss_pred CCCCcccccchHHHhhcCCCCCCCcccCCHHHHHHHHHHcCCCCCC-ccccCCCCCCccccCCCC------eEEEEEEee
Q 005260 245 PSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVAN-EDWQGDKDAPIYRVGPGP------GVVNLSYTG 317 (705)
Q Consensus 245 ps~~~~~r~~~~~~~~~~~~p~IP~~~is~~~a~~Ll~~l~~~~~~-~~w~~~l~~~~y~~gp~~------~~v~l~~~~ 317 (705)
||.++++|++.+++ ..+|+||++|||++||++||+.|+|..+| .+|+|+|+ ++|++||++ .+|+|+|++
T Consensus 156 ps~~~~~r~~~~~~---~~lP~IP~~PIS~~dA~~lL~~L~G~~~p~~~W~G~l~-~~Y~~Gpg~~~~~s~~kv~l~V~n 231 (233)
T d3bi1a2 156 PANEYAYRRGIAEA---VGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLK-VPYNVGPGFTGNFSTQKVKMHIHS 231 (233)
T ss_dssp CCCTTCCCCCGGGC---SSCCSSCEEEECHHHHHHHHTTBCBBCCSSGGGCCSSS-SCCCCBSSBCGGGTTCEEEEEBCC
T ss_pred CCCCCCcccChhHh---cCCCCCceeccCHHHHHHHHHHcCCCCCCchhccCCCC-CceecCCCccCCCCCCeEEEEEec
Confidence 99999999988765 47999999999999999999999999998 69999998 999999964 378888876
Q ss_pred e
Q 005260 318 E 318 (705)
Q Consensus 318 ~ 318 (705)
+
T Consensus 232 ~ 232 (233)
T d3bi1a2 232 T 232 (233)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} | Back information, alignment and structure |
|---|
| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} | Back information, alignment and structure |
|---|
| >d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1de4c1 a.48.2.1 (C:609-756) Transferrin receptor ectodomain, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
| >d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
|---|
| >d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
| >d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} | Back information, alignment and structure |
|---|
| >d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
| >d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} | Back information, alignment and structure |
|---|
| >d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} | Back information, alignment and structure |
|---|
| >d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} | Back information, alignment and structure |
|---|
| >d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} | Back information, alignment and structure |
|---|